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Slot: notes

URI: dismech:slot/notes Alias: notes

Applicable Classes

Name Description Modifies Slot
ComorbidityAssociation An association between two conditions, including directionality, evidence, an... no
ICDOMorphologyAssignment ICD-O morphology classification assignment for neoplastic diseases no
ICD10CMMapping ICD-10-CM diagnosis code mapping no
AgentLifeCycle no
Disease no
Definition A diagnostic or phenotype definition for the disease no
FDASurrogateEndpointCollection FDA surrogate endpoint table import preserving row-level source provenance no
MondoMapping MONDO disease ontology mapping no
Discussion A thread-like record of an open question, controversy, curation todo, emergin... no
ComputationalModel A computational or in-silico model relevant to understanding disease mechanis... no
ProgressionInfo no
OnsetDescriptor Structured description of age of onset no
EpidemiologyInfo no
Phenotype no
Prevalence no
HistopathologyFinding A histopathologic finding from microscopic examination of tissue no
GeneticContext A structured description of a genetic context that modifies phenotype frequen... no
Environmental An environmental factor, exposure, or context relevant to disease no
Experiment A structured experiment or protocol-level study design that can be proposed t... no
IUISAssignment IUIS primary immunodeficiency classification assignment no
Genetic no
AssociationMetric Quantitative association metric and its uncertainty no
Pathophysiology no
ClinicalTrial A clinical trial relevant to treatment or research of a disease no
MappingConsistency Consistency assertion for a mapping relative to another source no
SurrogateEndpoint A regulatory surrogate endpoint assertion curated from FDA's surrogate endpoi... no
NCITMapping NCIT disease, subtype, or disease/finding ontology mapping for cancer entries no
Diagnosis no
SurrogateEndpointCollection A source-level collection of curated regulatory surrogate endpoint assertions no
HarrisonsChapterAssignment Harrison's internal medicine chapter classification assignment no
AgentLifeCycleStage no
ReferenceRange A population reference interval for a clinical laboratory analyte no
ClassificationAssignment Base class for classification assignments with evidence no
ExperimentalControl A comparator or control condition for an experiment, such as an isogenic wild... no
ChannelopathyAssignment Channelopathy organ system classification assignment no
MechanisticHypothesis Disease-level hypothesis metadata used to organize downstream causal edges in... no
ExternalAssertion An externally curated assertion or registry record relevant to a disease or v... no
PhenotypeContext A context-specific annotation qualifying how a phenotype manifests under part... no
MechanisticNosologyAssignment Mechanistic/pathway-based disease classification assignment no
ModelVariable A variable in a computational model, identified by a human-readable name, wit... no
AssociationStatistics Statistical summary with evidence for an association signal no
Transmission no
Stage no
ExperimentalReadout A structured readout or outcome measured in an experiment no
CriteriaSet A named criteria grouping within a definition no
AssociationSignal An association signal from EHR, registry, or computational sources, optionall... no
TrackedIssue Structured pointer to an external tracker issue (typically a GitHub issue) us... no
ExperimentalModel A disease-relevant non-animal experimental model system no
LysosomalStorageAssignment Lysosomal storage disease biochemical classification assignment no
ExperimentalPerturbation A structured perturbation, intervention, or exposure used in an experiment no
Treatment no
TermMapping Mapping from this disease entry to an external term or code no
Dataset A reference to a publicly available omics or phenotype dataset no
DifferentialDiagnosis A disease or condition that presents similarly to the focal disease and must ... yes
ICD11FMapping ICD-11 Foundation diagnosis code mapping no
Biochemical no

Properties

Type and Range

Property Value
Range String
Domain Of GeneticContext, OnsetDescriptor, PhenotypeContext, Dataset, ExperimentalModel, Experiment, ExperimentalPerturbation, ExperimentalReadout, ExperimentalControl, ClinicalTrial, ComputationalModel, ModelVariable, DifferentialDiagnosis, ReferenceRange, SurrogateEndpoint, SurrogateEndpointCollection, ExternalAssertion, TrackedIssue, Prevalence, ProgressionInfo, EpidemiologyInfo, Pathophysiology, Phenotype, Biochemical, HistopathologyFinding, Genetic, Environmental, Disease, Stage, AgentLifeCycle, AgentLifeCycleStage, Treatment, Transmission, Diagnosis, ClassificationAssignment, Definition, CriteriaSet, TermMapping, MappingConsistency, ComorbidityAssociation, AssociationSignal, AssociationMetric, AssociationStatistics, MechanisticHypothesis, Discussion

Cardinality and Requirements

Property Value

Examples

Value
Contagious stage where symptoms appear and the bacteria can be spread to others.

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/monarch-initiative/dismech

Mappings

Mapping Type Mapped Value
self dismech:notes
native dismech:notes

LinkML Source

name: notes
examples:
- value: Contagious stage where symptoms appear and the bacteria can be spread to
    others.
from_schema: https://w3id.org/monarch-initiative/dismech
rank: 1000
alias: notes
domain_of:
- GeneticContext
- OnsetDescriptor
- PhenotypeContext
- Dataset
- ExperimentalModel
- Experiment
- ExperimentalPerturbation
- ExperimentalReadout
- ExperimentalControl
- ClinicalTrial
- ComputationalModel
- ModelVariable
- DifferentialDiagnosis
- ReferenceRange
- SurrogateEndpoint
- SurrogateEndpointCollection
- ExternalAssertion
- TrackedIssue
- Prevalence
- ProgressionInfo
- EpidemiologyInfo
- Pathophysiology
- Phenotype
- Biochemical
- HistopathologyFinding
- Genetic
- Environmental
- Disease
- Stage
- AgentLifeCycle
- AgentLifeCycleStage
- Treatment
- Transmission
- Diagnosis
- ClassificationAssignment
- Definition
- CriteriaSet
- TermMapping
- MappingConsistency
- ComorbidityAssociation
- AssociationSignal
- AssociationMetric
- AssociationStatistics
- MechanisticHypothesis
- Discussion
range: string