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Slot: variant_origin

The origin of disease-associated variation in this gene (germline, somatic, de novo, or both). Bound to GENO allele origin terms.

URI: dismech:slot/variant_origin Alias: variant_origin

Applicable Classes

Name Description Modifies Slot
GeneticContext A structured description of a genetic context that modifies phenotype frequen... no
Genetic no

Properties

Type and Range

Property Value
Range VariantOriginEnum
Domain Of GeneticContext, Genetic

Cardinality and Requirements

Property Value

Examples

Value
SOMATIC

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/monarch-initiative/dismech

Mappings

Mapping Type Mapped Value
self dismech:variant_origin
native dismech:variant_origin

LinkML Source

name: variant_origin
description: The origin of disease-associated variation in this gene (germline, somatic,
  de novo, or both). Bound to GENO allele origin terms.
examples:
- value: SOMATIC
from_schema: https://w3id.org/monarch-initiative/dismech
rank: 1000
alias: variant_origin
domain_of:
- GeneticContext
- Genetic
range: VariantOriginEnum