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Slot: conforms_to

Reference to a mechanism module that this pathophysiology node is an organ-specific instance of. Value is a path relative to kb/modules/ (e.g., "fibrotic_response") plus an optional node name after a hash (e.g., "fibrotic_response#Mesenchymal Cell Activation"). Used for cross-disorder consistency checking: if a node declares conformance, it should include the expected cell types, biological processes, and causal edges defined in the referenced module node.

A node may conform to more than one module node when it is a genuine instance of each (a germline first-hit node that is also loss of an mTORC1 brake conforms to both the two-hit and the mTORC1 module). Write a single reference as a plain string and several as a list of strings; both spellings are valid, so the scalar form never needs migrating. Code reads the value through dismech.conformance.iter_conforms_to, which normalises either spelling to a list (dismech#13923).

URI: dismech:slot/conforms_to Alias: conforms_to

Applicable Classes

Name Description Modifies Slot
Pathophysiology no

Properties

Type and Range

Property Value
Range Any or 
String
Domain Of Pathophysiology

Cardinality and Requirements

Property Value
Expressions & Logic #### Any Of Value must satisfy at least one of: - AnonymousSlotExpression({'range': 'string'}) - AnonymousSlotExpression({'range': 'string', 'multivalued': True})

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/monarch-initiative/dismech

Mappings

Mapping Type Mapped Value
self dismech:conforms_to
native dismech:conforms_to

LinkML Source

name: conforms_to
description: 'Reference to a mechanism module that this pathophysiology node is an
  organ-specific instance of. Value is a path relative to kb/modules/ (e.g., "fibrotic_response")
  plus an optional node name after a hash (e.g., "fibrotic_response#Mesenchymal Cell
  Activation"). Used for cross-disorder consistency checking: if a node declares conformance,
  it should include the expected cell types, biological processes, and causal edges
  defined in the referenced module node.

  A node may conform to more than one module node when it is a genuine instance of
  each (a germline first-hit node that is also loss of an mTORC1 brake conforms to
  both the two-hit and the mTORC1 module). Write a single reference as a plain string
  and several as a list of strings; both spellings are valid, so the scalar form never
  needs migrating. Code reads the value through `dismech.conformance.iter_conforms_to`,
  which normalises either spelling to a list (dismech#13923).'
from_schema: https://w3id.org/monarch-initiative/dismech
rank: 1000
alias: conforms_to
domain_of:
- Pathophysiology
range: Any
any_of:
- range: string
- range: string
  multivalued: true