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Slot: chromosomal_region

Qualitative human cytogenetic location: a chromosome, arm, band, or band range on one chromosome (e.g., 21, 7q, 17p13.3, or 16p12.2-p11.2). Use a single chromosome prefix and no chr prefix. This syntax does not validate band existence or imply exact coordinates, common breakpoints, or a genome assembly.

URI: dismech:slot/chromosomal_region Alias: chromosomal_region

Applicable Classes

Name Description Modifies Slot
GenomicRegion A named genomic feature or interval affected by an alteration no

Properties

Type and Range

Property Value
Range String
Domain Of GenomicRegion

Cardinality and Requirements

Property Value
### Value Constraints
Property Value
Regex Pattern ^([1-9]|1[0-9]|2[0-2]|X|Y)([pq]([1-9][0-9]*(\.[0-9]+)?)?(-[pq]([1-9][0-9]*(\.[0-9]+)?)?)?)?$

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/monarch-initiative/dismech

Mappings

Mapping Type Mapped Value
self dismech:chromosomal_region
native dismech:chromosomal_region

LinkML Source

name: chromosomal_region
description: 'Qualitative human cytogenetic location: a chromosome, arm, band, or
  band range on one chromosome (e.g., 21, 7q, 17p13.3, or 16p12.2-p11.2). Use a single
  chromosome prefix and no chr prefix. This syntax does not validate band existence
  or imply exact coordinates, common breakpoints, or a genome assembly.'
from_schema: https://w3id.org/monarch-initiative/dismech
rank: 1000
alias: chromosomal_region
domain_of:
- GenomicRegion
range: string
pattern: ^([1-9]|1[0-9]|2[0-2]|X|Y)([pq]([1-9][0-9]*(\.[0-9]+)?)?(-[pq]([1-9][0-9]*(\.[0-9]+)?)?)?)?$