Skip to content

Slot: affected_regions

Named genomic regions affected by the physical alteration, including regulatory elements or chromosome intervals. Each item describes the named feature, which need not span the entire variant. Record only source-supported locations; disease-level regions need not have exact patient-specific breakpoints. Evidence belongs on the enclosing record. Location landmarks do not assert regulatory targeting or causal gene involvement. Existing free-text descriptions remain valid.

URI: dismech:slot/affected_regions Alias: affected_regions

Applicable Classes

Name Description Modifies Slot
Variant A genetic variant associated with a disease, including coding and non-coding ... no
Genetic no
GeneticContext A structured description of a genetic context that modifies phenotype frequen... no

Properties

Type and Range

Property Value
Range GenomicRegion
Domain Of GeneticContext, Genetic, Variant

Cardinality and Requirements

Property Value
Multivalued Yes

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/monarch-initiative/dismech

Mappings

Mapping Type Mapped Value
self dismech:affected_regions
native dismech:affected_regions

LinkML Source

name: affected_regions
description: Named genomic regions affected by the physical alteration, including
  regulatory elements or chromosome intervals. Each item describes the named feature,
  which need not span the entire variant. Record only source-supported locations;
  disease-level regions need not have exact patient-specific breakpoints. Evidence
  belongs on the enclosing record. Location landmarks do not assert regulatory targeting
  or causal gene involvement. Existing free-text descriptions remain valid.
from_schema: https://w3id.org/monarch-initiative/dismech
rank: 1000
alias: affected_regions
domain_of:
- GeneticContext
- Genetic
- Variant
range: GenomicRegion
multivalued: true
inlined: true
inlined_as_list: true