Slot: adjacent_to_genes
Genes whose sequence boundary directly meets the named region in the linear reference genome, without overlap or intervening sequence. This is strict adjacency, not approximate proximity. Omit when the source establishes only that a gene is nearby. Does not describe chromatin contacts or adjacency created by a rearrangement.
URI: dismech:slot/adjacent_to_genes
Alias: adjacent_to_genes
Applicable Classes
| Name |
Description |
Modifies Slot |
| GenomicRegion |
A named genomic feature or interval affected by an alteration |
no |
Properties
Type and Range
Cardinality and Requirements
| Property |
Value |
| Multivalued |
Yes |
Schema Source
- from schema: https://w3id.org/monarch-initiative/dismech
Mappings
| Mapping Type |
Mapped Value |
| self |
dismech:adjacent_to_genes |
| native |
dismech:adjacent_to_genes |
LinkML Source
name: adjacent_to_genes
description: Genes whose sequence boundary directly meets the named region in the
linear reference genome, without overlap or intervening sequence. This is strict
adjacency, not approximate proximity. Omit when the source establishes only that
a gene is nearby. Does not describe chromatin contacts or adjacency created by a
rearrangement.
from_schema: https://w3id.org/monarch-initiative/dismech
rank: 1000
alias: adjacent_to_genes
domain_of:
- GenomicRegion
range: GeneDescriptor
multivalued: true
inlined: true
inlined_as_list: true