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Enum: FunctionalImpactEnum

Directional or qualitative functional consequence of a variant or genetic context.

URI: dismech:enum/FunctionalImpactEnum

Permissible Values

Value Meaning Description Additional Info
LOSS_OF_FUNCTION None Complete or partial reduction of normal gene product function Title: Loss of function
GAIN_OF_FUNCTION None Increased, novel, or constitutive gene product function Title: Gain of function
PARTIAL_LOSS_OF_FUNCTION None Hypomorphic reduction of normal gene product function Title: Partial loss of function
DOMINANT_NEGATIVE None Mutant product interferes with the remaining wild-type product Title: Dominant negative
HYPERMORPHIC None Increased normal gene product activity Title: Hypermorphic
NEOMORPHIC None Novel gene product activity not present in the wild type Title: Neomorphic
UNKNOWN None Functional impact is not known Title: Unknown

Slots

Name Description
functional_impact_category Controlled functional impact category for a genetic context

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/monarch-initiative/dismech

LinkML Source

name: FunctionalImpactEnum
description: Directional or qualitative functional consequence of a variant or genetic
  context.
from_schema: https://w3id.org/monarch-initiative/dismech
rank: 1000
permissible_values:
  LOSS_OF_FUNCTION:
    text: LOSS_OF_FUNCTION
    description: Complete or partial reduction of normal gene product function.
    title: Loss of function
  GAIN_OF_FUNCTION:
    text: GAIN_OF_FUNCTION
    description: Increased, novel, or constitutive gene product function.
    title: Gain of function
  PARTIAL_LOSS_OF_FUNCTION:
    text: PARTIAL_LOSS_OF_FUNCTION
    description: Hypomorphic reduction of normal gene product function.
    title: Partial loss of function
  DOMINANT_NEGATIVE:
    text: DOMINANT_NEGATIVE
    description: Mutant product interferes with the remaining wild-type product.
    title: Dominant negative
  HYPERMORPHIC:
    text: HYPERMORPHIC
    description: Increased normal gene product activity.
    title: Hypermorphic
  NEOMORPHIC:
    text: NEOMORPHIC
    description: Novel gene product activity not present in the wild type.
    title: Neomorphic
  UNKNOWN:
    text: UNKNOWN
    description: Functional impact is not known.
    title: Unknown