GPCRs: Drug Mechanisms and Disease Modules

In progress PHARMACOLOGYMODULESGPCR

GPCRs: Drug Mechanisms and Disease Modules

Overview

G protein-coupled receptors are the molecular target of a large share of approved drugs and the site of a well-defined set of Mendelian endocrinopathies. This project builds dismech mechanism modules around them, on two axes:

  1. Drug-mechanism modules — one per major GPCR-targeting drug class, so a disease entry's treatment can conforms_to a shared receptor → transducer → effector chain instead of re-deriving it, following the pattern the antimicrobial set established (projects/ANTIMICROBIAL.md).
  2. Disease modules — the recurring ways a GPCR or its transducer breaks: loss of function (hormone resistance), constitutive activation, and transducer defects.

The gene side is curated in parallel in ai-gene-review (projects/GPCR.md): receptor and transducer gene reviews, PANTHER family reviews, and GO pathway modules (Gs-cAMP-PKA, Gq-PLC-Ca2+, planned Gi/o, G12/13, arrestin). The receptor reviewed there is the molecular anchor for the module here.

Scope (what this is and is not)

Existing modules that touch GPCRs

Module GPCR content
cardiac_camp_pka_calcium_handling beta-adrenergic → cAMP → PKA → Ca2+ handling in cardiomyocytes
somatotroph_camp_pka_overactivation GPR101 / GNAS / AIP convergence on cAMP in somatotrophs
spinal_hsp90_opioid_enhancement mu-opioid receptor signaling amplification
addiction_cycle dopamine and opioid receptor circuitry
parkinsonism_dopaminergic_degeneration nigrostriatal dopaminergic degeneration → striatal dopamine deficiency (presynaptic; no receptor content, so not a target for D2-blockade parkinsonism, which involves no neuron loss)
photoreceptor_degeneration rhodopsin-related retinopathy

Read each before creating a neighbour, and extend rather than duplicate where the scope already fits.

Workstream A — Drug-mechanism modules

Candidate modules, ordered by how many existing disease entries would conform:

Proposed module Receptor (gene) Drug classes Candidate conformers
beta-adrenergic receptor blockade ADRB1, ADRB2 beta-blockers Heart Failure, Essential Hypertension, Atrial Fibrillation (Glaucoma and Migraine were assessed and rejected; see the module's scope notes)
AT1 receptor blockade AGTR1 sartans, ARNI, sparsentan Essential Hypertension, Heart Failure, IgA Nephropathy (diabetic kidney disease has no entry yet; the module's renal evidence is the RENAAL trial in type 2 diabetic nephropathy)
mu-opioid receptor agonism OPRM1 opioid analgesics; antagonists/partial agonists for OUD Opioid Use Disorder, Acute Opioid Poisoning
D2 receptor antagonism DRD2 antipsychotics, antiemetics Schizophrenia, Bipolar Disorder, Cannabis Hyperemesis Syndrome, Subacute_Delirium. The extrapyramidal arm is modelled inside the module rather than as a drug-induced parkinsonism conformer; tardive dyskinesia is deliberately out of scope — see the module's scope notes
dopamine receptor agonism DRD2, DRD3 dopamine agonists Parkinsons Disease, hyperprolactinemia
GLP-1 / GIP receptor agonism GLP1R, GIPR incretin mimetics Type 2 Diabetes Mellitus, Obesity
5-HT1B/1D agonism HTR1B, HTR1D triptans Migraine, Migraine_with_Aura. Familial_Hemiplegic_Migraine was assessed and rejected: its management is avoidance of vasoconstricting agents, and a disease that withholds a drug class is not an instance of that class's mechanism
CGRP receptor antagonism CALCRL, RAMP1 gepants, erenumab Migraine, pseudotumor_cerebri. Scoped to receptor antagonism, so the peptide-directed antibodies are out; Migraine_with_Aura was assessed and rejected because its only CGRP treatment names no agent
H1 receptor antagonism HRH1 antihistamines Urticaria, Alpha-gal_Syndrome. Two modules rather than one: see the Decisions below. allergic rhinitis was listed here as a candidate and has no dismech entry, so Alpha-gal_Syndrome was wired instead, which also keeps the module indication-independent
H2 receptor antagonism HRH2 H2 blockers Gastroesophageal_Reflux_Disease. Scoped to H2 blockade, so the proton-pump inhibitors are out: they block the same terminal pump non-competitively and the H2RA mechanism is upstream of it
beta2 adrenergic receptor agonism ADRB2 SABA, LABA Asthma, Thunderstorm Asthma, Formaldehyde_Poisoning. Airway-scoped: the receptor's neuromuscular-transmission and potassium-shift effector chains are a separate question, below. Chronic_Obstructive_Pulmonary_Disease and Cough_Variant_Asthma were initially blocked by a generic Bronchodilator agent binding and were wired in #15777, which refined each to a beta-adrenergic agonist class term
muscarinic receptor antagonism (airway) CHRM3 SAMA, LAMA Chronic_Obstructive_Pulmonary_Disease. Airway-scoped, like the beta2 module and for the same reason; the module's own notes carry the census that makes the scope concrete. Cough_Variant_Asthma was assessed and rejected: its treatment is beta2-only in its own text, and the earlier assumption that it bundled a muscarinic antagonist was wrong
CaSR positive allosteric modulation CASR calcimimetics CKD-Mineral Bone Disorder, Familial Hypocalciuric Hypercalcemia 1 and _2, Parathyroid Gland Carcinoma, Parathyroid_Hyperplasia. This row originally read "secondary hyperparathyroidism in CKD"; the module turned out to be indication-independent, since the drug acts at the same receptor on the same cell whether the hormone excess comes from renal handling, an inactivating receptor variant or autonomous parathyroid tissue. Not tissue-scoped, unlike the airway modules above
S1P receptor modulation S1PR1 fingolimod, siponimod Multiple Sclerosis
P2Y12 receptor antagonism P2RY12 clopidogrel, ticagrelor Coronary Artery Disease, Carotid Stenosis, CADASIL_Type_1. Indication-independent, like the CaSR module: the three conformers span coronary, carotid and small-vessel cerebral disease, and the module is scoped to the receptor rather than to any of them. Six further entries name a P2Y12 antagonist and are not wired, because no treatment in any of them binds a P2Y12 antagonist as therapeutic_agent; the module's notes give the reason for each
V2 receptor antagonism AVPR2 vaptans SIADH, ADPKD
MC4R agonism MC4R setmelanotide Obesity Due to MC4R Pathway Disruption

Each module follows the create-module skill: a trigger → receptor engagement → transducer → effector → tissue consequence chain, with the treatment target_mechanisms drug pattern, module_categories: [PHARMACOLOGY] (plus TOXICOLOGY where an adverse-effect arm is modelled), and receptor genes bound to HGNC.

Adverse-effect arms to model explicitly, because they are mechanisms in their own right: opioid respiratory depression (brainstem MOR), D2-blockade extrapyramidal effects and hyperprolactinemia, beta-blocker bronchospasm (beta2 off-selectivity), 5-HT2B agonist valvulopathy.

First pairing: mu-opioid receptor (OPRM1)

Chosen first (2026-10-15): opioid drugs appear in about 18 entries (Opioid_Use_Disorder, Acute_Opioid_Poisoning, Acute_Post-Surgical_Pain, Alcohol_Use_Disorder, ...) and in addiction_cycle and spinal_hsp90_opioid_enhancement, each describing the mechanism on its own.

Workstream B — Disease modules

Proposed module Mechanism Example conformers
GPCR loss-of-function hormone resistance receptor misfolding / ER retention or loss of coupling → end-organ resistance despite high ligand X-Linked Nephrogenic Diabetes Insipidus (AVPR2), Familial Hypocalciuric Hypercalcemia 1 (CASR), Familial Glucocorticoid Deficiency (MC2R/MRAP), Obesity Due to MC4R Pathway Disruption, Kallmann Syndrome / GNRHR / KISS1R hypogonadism
GPCR constitutive activation ligand-independent receptor signaling → hormone excess or tissue overgrowth Autosomal Dominant Hypocalcemia 1 (CASR gain), Jansen metaphyseal chondrodysplasia (PTH1R), familial male-limited precocious puberty (LHCGR), non-autoimmune hyperthyroidism (TSHR)
Gs alpha defect GNAS loss (with imprinting) → multi-hormone resistance; GNAS gain → cAMP excess Pseudohypoparathyroidism, McCune-Albright syndrome (no dismech entry yet; a curation target); relate to somatotroph_camp_pka_overactivation

The loss/gain pair is deliberately symmetric: the same receptor (CASR, TSHR, LHCGR) appears on both sides, which is the test that the modules are mechanism-level rather than disease-level.

Plan

Phase 0 — scoping

Phase 1 — first modules

Phase 2 — conformers and remaining modules

Decisions

The question's premise was a false choice, and the answer is both: a migraine neurovascular mechanism module is a genuinely distinct third module, not a substitute for either drug module, and is now in the Workstream A queue above. - H1 and H2 antagonism are two modules, and so are airway beta2 agonism and muscarinic antagonism (decided 2026-10-26). Both were single rows in the Workstream A table above, and both are now split, by the rule two entries up. H1 and H2 are different receptors on different cells with disjoint effector chains -- cutaneous vasodilatation, extravasation and itch against parietal-cell acid secretion -- and disjoint conformers; they share only the word antihistamine. The airway pair are different receptors in opposite directions, Gs-coupled relaxation against Gq blockade, sharing only that the two drug classes are often inhaled together.

The queue table bundled on shared indication twice, which is the failure the rule above names, so a bundled row there should be read as a candidate for splitting rather than as a decision already taken.

Two corrections to the question's own framing came out of the same work, and both are recorded above: bundling two drug classes into one treatment does not block conformance when the agents are bound separately, so five of the six entries the question listed as blocked -- the four mastocytosis entries and Cough_Variant_Asthma -- were never bundling problems at all; and the sixth, Chronic_Obstructive_Pulmonary_Disease, was blocked by a generic agent term covering more than one class rather than by bundling as such, which is what actually blocks conformance.

Deferred follow-ups

Items raised in review and deliberately not done at the time, recorded here so they are not lost. None blocks anything.

Open questions

muscarinic_receptor_antagonism (#15795) put numbers on the same question, and they are starker. A census taken while writing it found antimuscarinic drugs used across the corpus for four mechanistically disjoint purposes sharing that module's trigger and diverging at the effector: airway bronchodilation, 3 entries; detrusor overactivity and neurogenic bladder, 11; striatal cholinergic blockade in dystonia and related movement disorders, chiefly trihexyphenidyl, 20; and reversal of a cholinergic crisis with atropine, 10. The module is scoped to the airway because that is what this page's queue row named — which means it is scoped to the smallest of the four arms, on the wording of a table rather than on the biology, and the other 41 entries have no module. If tissue is a scoping axis, that is three more muscarinic modules to write; if it is not, this one should be widened into a shared trigger with four effector arms. Either way the current state is an artefact, and the module's notes say so.

A fourth group names a beta2 agonist without treating with one: several cardiac entries cite beta-adrenergic stimulation as an arrhythmia provocateur or a thing to avoid. Those are not conformer candidates in any scoping, and the count above excludes them.

The three blocked airway entries are declared in this page's frontmatter, so they link from the prose above. The neuromuscular and potassium-shift entries deliberately are not, pending this decision: declaring them would put seven more entries in the project's disease list on the strength of a scoping question nobody has answered yet. Add them if the answer is one shared trigger. - Should there be a module for the H2-mediated symptoms antihistamines treat? Raised by #15778. The four mastocytosis entries take an H2 antagonist for flushing, gastric hypersecretion and hypotension in mast cell mediator release, and h2_receptor_antagonism cannot hold that: it is scoped to the parietal-cell acid-secretion chain, which is one of those symptoms and not the others. So the H2 half of those four treatments is unwired for a reason unrelated to the bundling premise above — it is module scope, and the remedy is either a second H2 module scoped to mediator-release symptoms or a widening of the existing one's effector arms. Both options cross the one-receptor-one-direction rule in the same way the tissue question above does, which is a reason to decide them together.