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Pathophysiology Nodes

5
5 shared nodes are defined in this module.
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Cell Types

1
platelet CL:0000233 Cell Ontology (CL) Relation: this mechanism module involves this cell type This mechanism module involves platelet (CL:0000233). CL:0000233 is a cell type from the Cell Ontology.
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Biological Processes

3
Gi-mediated inhibition of adenylate cyclase GO:0007193 ↓ DECREASED Gene Ontology (GO) Relation: this mechanism module involves this biological process This mechanism module involves decreased Gi-mediated inhibition of adenylate cyclase (GO:0007193). GO:0007193 is a biological process from the Gene Ontology. platelet activation GO:0030168 ↓ DECREASED Gene Ontology (GO) Relation: this mechanism module involves this biological process This mechanism module involves decreased platelet activation (GO:0030168). GO:0030168 is a biological process from the Gene Ontology. platelet aggregation GO:0070527 ↓ DECREASED Gene Ontology (GO) Relation: this mechanism module involves this biological process This mechanism module involves decreased platelet aggregation (GO:0070527). GO:0070527 is a biological process from the Gene Ontology.
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Notes

The receptor term here is specific where the calcium-sensing module had to settle for a generic one. GO:0001621 G protein-coupled ADP receptor activity names exactly what P2RY12 does, so the trigger binds it rather than the generic GO:0004930, and the gene binding (hgnc:18124) is corroboration rather than the only thing carrying the receptor identity. That is a difference in ontology coverage between receptors, not a claim that this one is better understood. The transducer step is sourced rather than assumed, and the sourcing is uneven in a way worth stating. That P2Y12 signals through Gi in human platelets is quoted from a study of platelet P2Y12 pharmacology, but that sentence is the authors restating their own earlier work, so it is graded BACKGROUND. The step from Gi to adenylate cyclase and cyclic AMP is quoted from a different paper whose subject is three natural products rather than a licensed antagonist, and whose cells are transfected HEK293 lines; it is cited for the pathway it maps and graded INDIRECT, not for its headline. The node does carry one direct measurement of its own quantity: basal cyclic AMP rises in human platelets when the receptor is blocked by selatogrel. That agent is investigational, so no cited abstract here measures the rise under a licensed P2Y12 inhibitor, and the node asserts the loss of the inhibition rather than a figure for it. The trigger is written for the class and not for one drug. Its own evidence quotes a paper on selatogrel, an investigational antagonist, because that paper's result names ticagrelor and elinogrel in the same sentence; what that sentence establishes is stabilization of the inactive Gi/o heterotrimer in cells with recombinant P2Y12, and only selatogrel is shown by cocrystal to stabilize the inactive receptor itself, so the trigger node is not written as a receptor-conformation claim for the class; the treatment block binds clopidogrel and ticagrelor, which are the two agents conformers in this knowledge base actually use. The irreversible thienopyridines and the reversible agents are not distinguished as separate nodes, because no conformer here turns on that difference and no abstract cited establishes a distinct downstream chain for it. Bleeding is modelled as a consequence arm rather than an adverse-effect aside, for the same reason hypocalcaemia is in casr_positive_allosteric_modulation: it is the same mechanism read at the organism scale, since a platelet that cannot be activated by ADP also cannot seal an injury. The cited source is a surgical trial whose premise is that patients still on ticagrelor bleed severely, which is the clearest statement of the risk in the sources gathered here rather than a quantified population rate. Three conformers are wired, all at the trigger: CADASIL_Type_1, Carotid_Stenosis and Coronary_Artery_Disease. Six further entries name a P2Y12 antagonist and are not wired, and the reasons divide into three kinds. Peripheral_Artery_Disease binds the generic NCIT:C1327 Antiplatelet Agent, which covers aspirin as well, so wiring it would assert P2Y12 action for a cyclooxygenase inhibitor; that is the same defect as the generic Bronchodilator binding that blocked Chronic_Obstructive_Pulmonary_Disease from the beta2 module until it was split. Carotid_Artery_Occlusion names clopidogrel in its treatment prose but binds only acetylsalicylic acid, so the agent would have to be bound before the treatment could be routed. Grange_syndrome, Kawasaki_Disease and Renal_Artery_Obstruction bind no agent at all on the relevant treatment, and Secondary_Erythromelalgia names ticlopidine only as one of the platelet inhibitors that failed to relieve its pain, inside a quoted result, so it is not treated with the class at all. What the six have in common, and the reason none is wired, is that no treatment in any of them binds a P2Y12 antagonist as therapeutic_agent. A bundled treatment is not itself an obstacle: CADASIL_Type_1 and Carotid_Stenosis both pair the antagonist with aspirin, and Carotid_Stenosis adds atorvastatin, but all bind their components as separate agents, so each receptor can take its own link.
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Used By Disorder Entries

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Pathograph

Use the checkboxes to hide or show graph categories. Hover nodes for evidence-backed metadata.
Pathograph: causal mechanism network for P2Y12 Receptor Antagonism Module Interactive directed graph showing how this shared module's pathophysiology nodes connect.
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Pathophysiology

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P2Y12 Antagonist Occupancy of the Platelet ADP Receptor
trigger
A P2Y12 antagonist occupies the ADP receptor on the platelet surface and prevents adenosine diphosphate from binding it. The receptor is a G protein-coupled receptor, which is what places this module in the GPCR drug-mechanism family.
platelet CL:0000233 Cell Ontology (CL) Relation: this pathophysiological event involves this cell type This pathophysiological event involves platelet (CL:0000233). CL:0000233 is a cell type from the Cell Ontology.
Show evidence (2 references)
PMID:36306820 SUPPORT DIRECT BACKGROUND In vitro / ex vivo
"Selatogrel is a potent inhibitor of adenosine diphosphate (ADP) binding to the P2Y12 receptor, preventing platelet activation"
States the receptor-level action this node represents, blocking ADP binding at P2Y12. It is the abstract's framing line for selatogrel's established action, before the paper's own results.
PMID:36306820 SUPPORT DIRECT PRIMARY RESULT In vitro / ex vivo
"selatogrel, ticagrelor, and elinogrel were shown to stabilize the inactive form of the Gαi/o-Gβγ complex in cells with recombinant expression of the P2Y12 receptor"
Names ticagrelor, one of the two agents the conformers use, among the antagonists shown to hold the receptor's Gi/o heterotrimer in its inactive form. The measurement is in cells with recombinant P2Y12, not in platelets.
Loss of Gi-Mediated Adenylate Cyclase Inhibition
amplifier
With the receptor blocked, its Gi-mediated inhibition of adenylate cyclase is lifted and the cyclic AMP brake on platelet activation is restored. No cited abstract here measures cyclic AMP rising in platelets under a licensed antagonist, so this node asserts the loss of the inhibition rather than a quantified rise; see the module notes.
platelet CL:0000233 Cell Ontology (CL) Relation: this pathophysiological event involves this cell type This pathophysiological event involves platelet (CL:0000233). CL:0000233 is a cell type from the Cell Ontology.
Gi-mediated inhibition of adenylate cyclase GO:0007193 ↓ DECREASED Gene Ontology (GO) Relation: this pathophysiological event involves this biological process This pathophysiological event involves decreased Gi-mediated inhibition of adenylate cyclase, annotated with adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (GO:0007193). GO:0007193 is a biological process from the Gene Ontology.
Show evidence (2 references)
PMID:39563013 SUPPORT INDIRECT PRIMARY RESULT In vitro / ex vivo
"salvianolic acid B inhibited platelet aggregation via targeting at P2Y12 receptor and via Gi-AC-cAMP signal pathway"
Maps the P2Y12 pathway as Gi to adenylate cyclase to cyclic AMP, which is the chain this node sits on. Cited for the pathway, not for its subject compound; see the module notes on why it is graded indirect.
PMID:36306820 SUPPORT DIRECT PRIMARY RESULT In vitro / ex vivo
"selatogrel increased basal cAMP levels in human platelets, confirming inverse agonism on the endogenous human platelet P2Y12 receptor"
Measures the node's own quantity in human platelets: basal cAMP rises when the receptor is blocked, which is the loss of Gi-mediated adenylate cyclase inhibition. The agent is selatogrel, which is investigational rather than licensed.
Suppression of ADP-Induced Platelet Activation
central effector
The platelet no longer activates in response to ADP. This is the key conformance target: the rate-limiting step every conformer funnels through, whatever arterial bed is at risk.
platelet CL:0000233 Cell Ontology (CL) Relation: this pathophysiological event involves this cell type This pathophysiological event involves platelet (CL:0000233). CL:0000233 is a cell type from the Cell Ontology.
platelet activation GO:0030168 ↓ DECREASED Gene Ontology (GO) Relation: this pathophysiological event involves this biological process This pathophysiological event involves decreased platelet activation (GO:0030168). GO:0030168 is a biological process from the Gene Ontology.
Show evidence (1 reference)
PMID:36306820 SUPPORT DIRECT BACKGROUND In vitro / ex vivo
"Selatogrel is a potent inhibitor of adenosine diphosphate (ADP) binding to the P2Y12 receptor, preventing platelet activation"
Names the suppressed platelet activation and the receptor blockade that produces it, which is exactly this node.
Reduced Platelet Aggregation and Arterial Thrombosis
consequence
Platelet aggregation falls and the arterial thrombotic events the disease is at risk of are prevented. This is the therapeutic endpoint the drug class is given for.
platelet aggregation GO:0070527 ↓ DECREASED Gene Ontology (GO) Relation: this pathophysiological event involves this biological process This pathophysiological event involves decreased platelet aggregation (GO:0070527). GO:0070527 is a biological process from the Gene Ontology.
Show evidence (1 reference)
PMID:42810452 SUPPORT DIRECT BACKGROUND Other
"Oral P2Y12 inhibitors represent the mainstay therapy for the prevention of thrombotic complications in patients undergoing percutaneous coronary intervention"
Names the prevention of thrombotic complications that this node represents, in the setting where the class is most used.
Bleeding
consequence
Haemostasis is impaired and bleeding risk rises. This node is the dose-limiting edge of the mechanism rather than a claim about any particular rate: the cited source is a surgical trial whose premise is that patients still on ticagrelor bleed severely, not a population estimate.
Show evidence (1 reference)
PMID:41581856 SUPPORT DIRECT BACKGROUND Human clinical
"Patients on ticagrelor who are undergoing cardiac surgery before completing guideline-recommended washout are at high risk for severe bleeding"
States the severe bleeding risk in patients with active P2Y12 blockade, which is this node.
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Treatments

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P2Y12 Inhibitor Therapy
Pharmacotherapy NCIT:C15986 NCI Thesaurus (NCIT) Relation: this treatment is this clinical intervention This treatment is Pharmacotherapy (NCIT:C15986). NCIT:C15986 is a clinical intervention from the NCI Thesaurus.
Agent: clopidogrel CHEBI:37941 Chemical Entities of Biological Interest (CHEBI) Relation: this treatment uses this therapeutic agent This treatment uses clopidogrel (CHEBI:37941). CHEBI:37941 is a therapeutic agent from Chemical Entities of Biological Interest. ticagrelor CHEBI:68558 Chemical Entities of Biological Interest (CHEBI) Relation: this treatment uses this therapeutic agent This treatment uses ticagrelor (CHEBI:68558). CHEBI:68558 is a therapeutic agent from Chemical Entities of Biological Interest.
Platform: Small molecule
An antagonist of the platelet P2Y12 ADP receptor, given to suppress ADP-induced platelet activation. Clopidogrel is the irreversible thienopyridine prodrug and ticagrelor a reversible agent; both are in use among this module's conformers.
Mechanism target:
ACTIVATES P2Y12 Antagonist Occupancy of the Platelet ADP Receptor — The drug is what occupies the receptor, so it acts at the module trigger. Its relation to the nodes below is prevention of thrombosis rather than causation, so no downstream edge is asserted from the treatment. Evidence: 1