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Pathophysiology Nodes

5
5 shared nodes are defined in this module.
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Cell Types

3
vascular endothelial cell CL:0000115 Cell Ontology (CL) Relation: this mechanism module involves this cell type This mechanism module involves vascular endothelial cell (CL:0000115). CL:0000115 is a cell type from the Cell Ontology. foam cell (lipid-laden macrophage) CL:0000235 Cell Ontology (CL) Relation: this mechanism module involves this cell type This mechanism module involves foam cell (lipid-laden macrophage) (CL:0000235). CL:0000235 is a cell type from the Cell Ontology. vascular smooth muscle cell CL:0000192 Cell Ontology (CL) Relation: this mechanism module involves this cell type This mechanism module involves vascular smooth muscle cell (CL:0000192). CL:0000192 is a cell type from the Cell Ontology.
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Biological Processes

5
cholesterol homeostasis GO:0042632 ↕ DYSREGULATED Gene Ontology (GO) Relation: this mechanism module involves this biological process This mechanism module involves dysregulated cholesterol homeostasis (GO:0042632). GO:0042632 is a biological process from the Gene Ontology. foam cell differentiation GO:0090077 ↑ INCREASED Gene Ontology (GO) Relation: this mechanism module involves this biological process This mechanism module involves increased foam cell differentiation (GO:0090077). GO:0090077 is a biological process from the Gene Ontology. inflammatory response GO:0006954 ↑ INCREASED Gene Ontology (GO) Relation: this mechanism module involves this biological process This mechanism module involves increased inflammatory response (GO:0006954). GO:0006954 is a biological process from the Gene Ontology. smooth muscle cell proliferation GO:0048661 ↑ INCREASED Gene Ontology (GO) Relation: this mechanism module involves this biological process This mechanism module involves increased smooth muscle cell proliferation (GO:0048661). GO:0048661 is a biological process from the Gene Ontology. extracellular matrix organization GO:0030198 ↑ INCREASED Gene Ontology (GO) Relation: this mechanism module involves this biological process This mechanism module involves increased extracellular matrix organization (GO:0030198). GO:0030198 is a biological process from the Gene Ontology.
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Notes

This is a mechanism module, not a specific disease. It is a pathological structure-formation ("Xogenesis") module. Xogenesis anchor: the terminal output is an atheroma / atherosclerotic plaque, an OGMS:0000078 pathological anatomical structure produced by an OGMS:0000081 pathological derivation (a new intimal lesion); process genus OGMS:0000061 pathological bodily process; site UBERON:0001637 artery. MPATH represents the lesion as MPATH:28 (atherosclerosis) but has no distinct "atheroma"/"atherosclerotic plaque" continuant class, a noted OBO gap. SNOMED "Morphologically abnormal structure" (49755003) is used only as an external census/gap guide and is not bound here. Disorder entries reference individual nodes via conforms_to (for example, "atherogenesis#Smooth Muscle Cell Switching and Fibrofatty Plaque Formation"). The module defines the expected pathophysiology structure; conforming nodes in disorder files should include the corresponding cell types, biological processes, and causal edges, specialized to their disease context. A pathophysiology branch is within scope when it explicitly represents formation of an arterial-intimal atheroma through (1) retention of apoB-containing lipoprotein in the arterial intima, with oxidative or enzymatic modification as a possible specialization, (2) monocyte/macrophage foam-cell biology, and (3) vascular-smooth-muscle-cell and extracellular-matrix assembly of a fibrofatty plaque. This core three-stage chain is the operational necessary-and-sufficient curation boundary for module conformance; it is a prose guardrail, not a formal grouping criterion. Advanced necrotic core/fibrous cap, rupture or erosion with thrombosis, stenosis, and ischemia may be mapped when the disorder explicitly represents those later stages, but none is required and none is sufficient alone. Exclude hyperlipidemia or vascular risk without an explicit arterial plaque-forming branch, foam cells outside arterial atheroma, nonatherosclerotic stenosis, dissection or thrombosis, and terminal ischemia without modeled plaque formation. Because conformance is node-level, an explicit atherosclerotic branch of a mixed-etiology disorder may qualify without asserting that every disease mechanism is atherogenic. Familial hypercholesterolemia substitutes a high LDL/apoB burden at the retention trigger; diabetic atherosclerosis substitutes hyperglycemia and advanced glycation end-products; the terminal rupture/thrombosis node feeds the thrombogenesis module. Mechanism nodes bind GO, CL, and UBERON terms where appropriate and do not use chemical (CHEBI) or disease (MONDO) term bindings, except in the treatments block where the therapeutic agent carries an ontology identifier per the treatment schema.
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Used By Disorder Entries

8
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Pathograph

Use the checkboxes to hide or show graph categories. Hover nodes for evidence-backed metadata.
Pathograph: causal mechanism network for Atherogenesis Module Interactive directed graph showing how this shared module's pathophysiology nodes connect.
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Pathophysiology

5
Endothelial Dysfunction and Subendothelial LDL Retention
trigger
The proximal trigger of atherogenesis. Endothelial dysfunction - from disturbed flow, hypercholesterolemia, hypertension, smoking, or hyperglycemia - increases arterial-wall permeability and alters the subendothelial matrix, permitting infiltration and retention of apoB-containing lipoproteins (LDL) in the intima. Retained LDL is oxidatively and enzymatically modified, becoming a pro-inflammatory stimulus. This subendothelial lipoprotein retention is the critical initiating event of the plaque; the disease-specific driver differs but the retained-LDL trigger is shared.
vascular endothelial cell CL:0000115 Cell Ontology (CL) Relation: this pathophysiological event involves this cell type This pathophysiological event involves vascular endothelial cell, annotated with endothelial cell (CL:0000115). CL:0000115 is a cell type from the Cell Ontology.
cholesterol homeostasis GO:0042632 ↕ DYSREGULATED Gene Ontology (GO) Relation: this pathophysiological event involves this biological process This pathophysiological event involves dysregulated cholesterol homeostasis (GO:0042632). GO:0042632 is a biological process from the Gene Ontology.
Show evidence (2 references)
PMID:26844337 SUPPORT Other
"infiltration and retention of apoB containing lipoproteins in the artery wall is a critical initiating event that sparks an inflammatory response and promotes the development of atherosclerosis."
Identifies subendothelial retention of apoB-containing lipoproteins as the critical initiating event of atherosclerosis, the trigger of this module. Evidence source is OTHER because this is an authoritative review chapter.
PMID:31684100 SUPPORT Other
"Endothelial cell dysfunction in the walls of blood vessels results in an increase in vascular permeability, alteration of the components of the extracellular matrix, and retention of LDL in the sub-endothelial space, thereby accelerating plaque formation."
Links endothelial dysfunction to increased permeability and subendothelial LDL retention accelerating plaque formation, the trigger of this module. Evidence source is OTHER because this is a review.
Monocyte Recruitment and Macrophage Foam Cell Formation
amplifier
Retained, modified LDL and activated endothelium recruit circulating monocytes into the intima, where they differentiate into macrophages and internalize the lipoproteins through scavenger receptors, becoming lipid-laden foam cells - the hallmark of the fatty streak. Foam-cell macrophage inflammation amplifies oxidative stress and cytokine secretion, driving further LDL oxidation, endothelial activation, and monocyte recruitment in a feed-forward loop. This is the amplifying step of atherogenesis.
foam cell (lipid-laden macrophage) CL:0000235 Cell Ontology (CL) Relation: this pathophysiological event involves this cell type This pathophysiological event involves foam cell (lipid-laden macrophage), annotated with macrophage (CL:0000235). CL:0000235 is a cell type from the Cell Ontology.
foam cell differentiation GO:0090077 ↑ INCREASED Gene Ontology (GO) Relation: this pathophysiological event involves this biological process This pathophysiological event involves increased foam cell differentiation (GO:0090077). GO:0090077 is a biological process from the Gene Ontology. inflammatory response GO:0006954 ↑ INCREASED Gene Ontology (GO) Relation: this pathophysiological event involves this biological process This pathophysiological event involves increased inflammatory response (GO:0006954). GO:0006954 is a biological process from the Gene Ontology.
Show evidence (2 references)
PMID:26844337 SUPPORT Other
"Internalization of the apoB containing lipoproteins by macrophages promotes foam cell formation, which is the hallmark of the fatty streak phase of atherosclerosis."
Establishes macrophage internalization of apoB lipoproteins driving foam cell formation as the hallmark of the fatty streak, the amplifier of this module. Evidence source is OTHER because this is a review chapter.
PMID:26844337 SUPPORT Other
"Macrophage inflammation results in enhanced oxidative stress and cytokine/chemokine secretion, causing more LDL/remnant oxidation, endothelial cell activation, monocyte recruitment, and foam cell formation."
Documents the feed-forward inflammatory loop (oxidative stress, cytokine secretion, further LDL oxidation, monocyte recruitment) that amplifies foam-cell formation. Evidence source is OTHER because this is a review chapter.
Smooth Muscle Cell Switching and Fibrofatty Plaque Formation
central effector
The rate-limiting central effector of atheroma formation. In the inflamed, lipid-rich intima, vascular smooth muscle cells undergo phenotypic switching from a contractile to a synthetic/migratory state, migrate into the intima, proliferate, and secrete extracellular matrix. Together with foam cells and a growing lipid/necrotic core, this builds the organized fibrofatty plaque capped by a smooth-muscle- and matrix-rich fibrous cap. This SMC-driven plaque assembly is the disorder-agnostic step that converts a fatty streak into an atheroma and is the key conformance target of the module.
vascular smooth muscle cell CL:0000192 Cell Ontology (CL) Relation: this pathophysiological event involves this cell type This pathophysiological event involves vascular smooth muscle cell, annotated with smooth muscle cell (CL:0000192). CL:0000192 is a cell type from the Cell Ontology.
smooth muscle cell proliferation GO:0048661 ↑ INCREASED Gene Ontology (GO) Relation: this pathophysiological event involves this biological process This pathophysiological event involves increased smooth muscle cell proliferation, annotated with positive regulation of smooth muscle cell proliferation (GO:0048661). GO:0048661 is a biological process from the Gene Ontology. extracellular matrix organization GO:0030198 ↑ INCREASED Gene Ontology (GO) Relation: this pathophysiological event involves this biological process This pathophysiological event involves increased extracellular matrix organization (GO:0030198). GO:0030198 is a biological process from the Gene Ontology.
Show evidence (1 reference)
PMID:37595697 SUPPORT Other
"vascular smooth muscle cell phenotypic switching through transdifferentiation and stem/progenitor cell activation resulting in the promotion of inflammation, calcification, and secretion of extracellular matrix, altering fibrous cap structure, and necrotic core growth."
Directly describes smooth muscle cell phenotypic switching driving extracellular-matrix secretion, fibrous-cap remodeling, and necrotic-core growth, the central effector of plaque formation. Evidence source is OTHER because this is a histopathology review.
Advanced Atheroma with Necrotic Core and Fibrous Cap
effector
Continued lipid accumulation, foam-cell death, and matrix remodeling enlarge the plaque into an advanced atheroma with a soft necrotic lipid core walled off by a fibrous cap. Local microenvironmental changes - neovascularization from the vasa vasorum, intraplaque hemorrhage, and necrotic-core expansion - promote the transition from a stable to an unstable (vulnerable) atheroma. This is the mature pathological structure the module produces.
vascular smooth muscle cell CL:0000192 Cell Ontology (CL) Relation: this pathophysiological event involves this cell type This pathophysiological event involves vascular smooth muscle cell, annotated with smooth muscle cell (CL:0000192). CL:0000192 is a cell type from the Cell Ontology.
extracellular matrix organization GO:0030198 ↑ INCREASED Gene Ontology (GO) Relation: this pathophysiological event involves this biological process This pathophysiological event involves increased extracellular matrix organization (GO:0030198). GO:0030198 is a biological process from the Gene Ontology.
Show evidence (1 reference)
PMID:37595697 SUPPORT Other
"the local arterial microenvironment of a stable atheroma promotes destabilizing conditions that result in the transition to an unstable atheroma."
Establishes the advanced atheroma and its microenvironment-driven transition from stable to unstable plaque, the effector structure of this module. Evidence source is OTHER because this is a histopathology review.
Plaque Rupture, Thrombosis, and Ischemic Events
consequence
The clinical end state of the module. Fibrous-cap rupture (or endothelial erosion) of an unstable atheroma exposes the thrombogenic necrotic core and subendothelial matrix to flowing blood, triggering luminal thrombosis (see the thrombogenesis module). The resulting thrombotic vascular occlusion causes acute ischemic events - acute coronary syndrome, myocardial infarction, and ischemic stroke - the consequence of the conserved atherogenesis chain.
Show evidence (3 references)
PMID:37595697 SUPPORT Other
"There are several rupture-associated phenotypes causing thrombotic vascular occlusion including simple fibrous cap rupture of an atheroma, fibrous cap rupture at site of previous rupture-and-repair of an atheroma, and nodular calcification with rupture."
Documents fibrous-cap rupture of the atheroma causing thrombotic vascular occlusion, the consequence that links atherogenesis to acute ischemic events. Evidence source is OTHER because this is a histopathology review.
PMID:37595697 SUPPORT Other
"Destabilization is characterized by several different plaque phenotypes that cause major clinical events such as acute coronary syndrome and cerebrovascular strokes."
Establishes acute coronary syndrome and stroke as the major clinical events caused by atheroma destabilization, the consequence of this module. Evidence source is OTHER because this is a review.
PMID:37595697 SUPPORT Other
"Endothelial erosion without rupture has more recently been shown to be a common phenotype to promote thrombosis as well."
Directly supports endothelial erosion as a thrombosis-promoting alternative to fibrous-cap rupture in the consequence node. Evidence source is OTHER because this is a histopathology review.
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Treatments

1
LDL-Lowering Therapy (Statin)
Pharmacotherapy NCIT:C15986 NCI Thesaurus (NCIT) Relation: this treatment is this clinical intervention This treatment is Pharmacotherapy (NCIT:C15986). NCIT:C15986 is a clinical intervention from the NCI Thesaurus.
Agent: atorvastatin CHEBI:39548 Chemical Entities of Biological Interest (CHEBI) Relation: this treatment uses this therapeutic agent This treatment uses atorvastatin (CHEBI:39548). CHEBI:39548 is a therapeutic agent from Chemical Entities of Biological Interest.
Platform: Small molecule
Statins (HMG-CoA reductase inhibitors, e.g., atorvastatin) lower circulating LDL cholesterol, the apoB-containing lipoprotein retained in the artery wall. By reducing the retained-LDL substrate that initiates and fuels the plaque, LDL-lowering therapy slows atheroma formation and progression and reduces atherosclerotic cardiovascular events. Represents the atherogenesis drug-target design pattern for conforming disorders, acting on the LDL-retention trigger rather than on the established plaque.
Mechanism target:
INHIBITS Endothelial Dysfunction and Subendothelial LDL Retention — Lowering circulating LDL reduces the apoB-lipoprotein substrate retained in the subendothelial space, blunting the initiating trigger of plaque formation.
Evidence: 2