Combined saposin deficiency (combined prosaposin/PSAP deficiency) is an exceedingly rare, fatal neonatal-onset lysosomal storage disorder caused by biallelic loss-of-function variants in PSAP that abolish the prosaposin precursor and therefore all four sphingolipid activator proteins (saposins A-D). Because each saposin is a cofactor for a distinct lysosomal hydrolase (those deficient in Krabbe disease, metachromatic leukodystrophy, Gaucher disease, and Farber disease), their simultaneous loss impairs degradation of multiple sphingolipids, producing combined storage disease with severe neonatal neurodegeneration, hepatosplenomegaly, thrombocytopenia, and early death.
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Conditions with similar clinical presentations that must be differentiated from Combined Saposin Deficiency:
name: Combined Saposin Deficiency
creation_date: "2026-06-13T00:00:00Z"
description: >-
Combined saposin deficiency (combined prosaposin/PSAP deficiency) is an exceedingly rare,
fatal neonatal-onset lysosomal storage disorder caused by biallelic loss-of-function
variants in PSAP that abolish the prosaposin precursor and therefore all four sphingolipid
activator proteins (saposins A-D). Because each saposin is a cofactor for a distinct
lysosomal hydrolase (those deficient in Krabbe disease, metachromatic leukodystrophy,
Gaucher disease, and Farber disease), their simultaneous loss impairs degradation of
multiple sphingolipids, producing combined storage disease with severe neonatal
neurodegeneration, hepatosplenomegaly, thrombocytopenia, and early death.
category: Mendelian
disease_term:
preferred_term: combined PSAP deficiency
term:
id: MONDO:0012719
label: combined PSAP deficiency
mappings:
mondo_mappings:
- term:
id: MONDO:0012719
label: combined PSAP deficiency
mapping_predicate: skos:exactMatch
mapping_source: MONDO
mapping_justification: Primary MONDO disease identifier for this combined prosaposin deficiency entry.
synonyms:
- Combined PSAP deficiency
- Prosaposin deficiency
- Total saposin deficiency
- Combined saposin A-D deficiency
parents:
- Sphingolipidosis
- Lysosomal Storage Disorder
pathophysiology:
- name: Prosaposin Deficiency and Loss of All Saposins
conforms_to: "lysosomal_substrate_accumulation#Lysosomal Hydrolase or Cofactor Deficiency"
description: >-
Biallelic null PSAP variants abolish the prosaposin precursor, eliminating all four
saposins (A-D). Each saposin is an essential cofactor for a distinct lysosomal sphingolipid
hydrolase, so their combined loss simultaneously impairs multiple degradation pathways.
gene:
preferred_term: PSAP
term:
id: hgnc:9498
label: PSAP
cell_types:
- preferred_term: neuron
term:
id: CL:0000540
label: neuron
evidence:
- reference: PMID:36969110
reference_title: "Combined saposin deficiency: A rare occurrence."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "This gene encodes a protein, prosaposin, that cleaves into four constituent proteins, each of which has a role as a cofactor for the enzymes whose deficiency results in Krabbe disease, metachromatic leukodystrophy, Gaucher disease, and Farber disease, respectively."
explanation: "PSAP-encoded prosaposin yields four saposins, each a cofactor for a distinct sphingolipid hydrolase; all are lost together."
downstream:
- target: Combined Multi-Sphingolipid Lysosomal Accumulation
description: Loss of all saposin cofactors impairs degradation of multiple sphingolipids.
- name: Combined Multi-Sphingolipid Lysosomal Accumulation
conforms_to: "lysosomal_substrate_accumulation#Lysosomal Substrate Accumulation"
description: >-
Without any saposin cofactors, multiple sphingolipids accumulate simultaneously in
lysosomes across the nervous system and viscera, and loss of intact prosaposin (which is
itself essential for neuronal survival) compounds the neurodegeneration.
cell_types:
- preferred_term: neuron
term:
id: CL:0000540
label: neuron
cellular_components:
- preferred_term: lysosome
term:
id: GO:0005764
label: lysosome
biological_processes:
- preferred_term: sphingolipid catabolic process
modifier: DECREASED
term:
id: GO:0030149
label: sphingolipid catabolic process
evidence:
- reference: PMID:36969110
reference_title: "Combined saposin deficiency: A rare occurrence."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "Combined saposin deficiency (OMIM #611721), an exceedingly rare lysosomal storage disorder, is caused by a mutation in the gene PSAP."
explanation: "Combined saposin deficiency is a lysosomal storage disorder from PSAP loss with multi-sphingolipid accumulation."
downstream:
- target: Neurodegeneration
description: >-
Multi-sphingolipid lysosomal storage and loss of intact prosaposin drive
severe neonatal neuronal injury.
causal_link_type: DIRECT
- target: Cerebral demyelination
description: >-
Storage-related nervous-system injury includes white-matter
demyelination in reported prosaposin deficiency.
causal_link_type: DIRECT
- target: Hepatosplenomegaly
description: >-
Visceral lysosomal storage in liver and spleen produces organomegaly.
causal_link_type: DIRECT
- target: Thrombocytopenia
description: >-
Severe neurovisceral storage disease is accompanied by thrombocytopenia
in neonatal combined saposin deficiency.
causal_link_type: INDIRECT_KNOWN_INTERMEDIATES
phenotypes:
- name: Neurodegeneration
description: Severe neonatal neurodegeneration; intact prosaposin is essential for neuronal survival.
phenotype_term:
preferred_term: Neurodegeneration
term:
id: HP:0002180
label: Neurodegeneration
evidence:
- reference: PMID:36969110
reference_title: "Combined saposin deficiency: A rare occurrence."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "Intact prosaposin itself is essential for neuronal survival"
explanation: "Loss of prosaposin, essential for neuronal survival, drives severe neurodegeneration."
- name: Hepatosplenomegaly
description: Visceral organomegaly from combined sphingolipid storage.
phenotype_term:
preferred_term: Hepatosplenomegaly
term:
id: HP:0001433
label: Hepatosplenomegaly
evidence:
- reference: PMID:36969110
reference_title: "Combined saposin deficiency: A rare occurrence."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "severe neurological\nfeatures in the neonatal period, hepatosplenomegaly, thrombocytopenia, and early"
explanation: "Hepatosplenomegaly is part of the typical neonatal manifestation."
- name: Thrombocytopenia
description: Hematologic abnormality accompanying visceral storage.
phenotype_term:
preferred_term: Thrombocytopenia
term:
id: HP:0001873
label: Thrombocytopenia
evidence:
- reference: PMID:36969110
reference_title: "Combined saposin deficiency: A rare occurrence."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "hepatosplenomegaly, thrombocytopenia, and early"
explanation: "Thrombocytopenia is part of the typical neonatal manifestation."
- name: Cerebral demyelination
description: >-
Severe neuronal storage and loss with white-matter demyelination (a leukodystrophy-like
neuropathology).
phenotype_term:
preferred_term: CNS demyelination
term:
id: HP:0007305
label: CNS demyelination
evidence:
- reference: PMID:11309366
reference_title: "A novel mutation in the coding region of the prosaposin gene leads to a complete deficiency of prosaposin and saposins, and is associated with a complex sphingolipidosis dominated by lactosylceramide accumulation."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "There was a paucity of myelin and stainable axons in the white matter with signs of active demyelination"
explanation: White-matter demyelination is part of the severe neuropathology of prosaposin deficiency.
biochemical:
- name: Combined saposin A/B/C/D deficiency
presence: DECREASED
context: >-
Total prosaposin deficiency abolishes all four saposin cofactors (A, B, C, D)
simultaneously, producing combined sphingolipid storage (notably lactosylceramide).
evidence:
- reference: PMID:11309366
reference_title: "A novel mutation in the coding region of the prosaposin gene leads to a complete deficiency of prosaposin and saposins, and is associated with a complex sphingolipidosis dominated by lactosylceramide accumulation."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "Immunohistochemical investigations indicated that saposins A, B, C and D were\nall deficient"
explanation: Combined deficiency of all four saposins is the defining biochemical lesion.
inheritance:
- name: Autosomal recessive
inheritance_term:
preferred_term: Autosomal recessive inheritance
term:
id: HP:0000007
label: Autosomal recessive inheritance
genetic:
- name: PSAP
association: Biallelic null PSAP variants abolishing prosaposin and all saposins
relationship_type: CAUSATIVE
variant_origin: GERMLINE
gene_term:
preferred_term: PSAP
term:
id: hgnc:9498
label: PSAP
evidence:
- reference: PMID:36969110
reference_title: "Combined saposin deficiency: A rare occurrence."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "Combined saposin deficiency (OMIM #611721), an exceedingly rare lysosomal storage disorder, is caused by a mutation in the gene PSAP."
explanation: "Biallelic PSAP variants cause combined saposin deficiency."
- reference: PMID:11309366
reference_title: "A novel mutation in the coding region of the prosaposin gene leads to a complete deficiency of prosaposin and saposins, and is associated with a complex sphingolipidosis dominated by lactosylceramide accumulation."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "The patient was homozygous for a 1 bp deletion (c.803delG) within\nthe SAP-B domain of the prosaposin gene which leads to a frameshift and\npremature stop codon"
explanation: A homozygous PSAP frameshift variant (c.803delG) abolishes prosaposin and all saposins.
diagnosis:
- name: PSAP molecular genetic testing
diagnosis_term:
preferred_term: genetic testing
term:
id: MAXO:0000127
label: genetic testing
description: >-
Diagnosis rests on PSAP sequencing; a combined pattern of multiple sphingolipid-activator
deficiencies with normal individual hydrolase genes suggests prosaposin deficiency.
evidence:
- reference: PMID:36969110
reference_title: "Combined saposin deficiency: A rare occurrence."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "is caused by a mutation in the gene PSAP"
explanation: "PSAP sequencing provides molecular confirmation."
differential_diagnoses:
- name: Gaucher disease due to saposin C deficiency
description: >-
Isolated saposin C deficiency produces a Gaucher-like phenotype, versus the combined
multi-sphingolipid disease of total prosaposin loss.
disease_term:
preferred_term: Gaucher disease due to saposin C deficiency
term:
id: MONDO:0012517
label: Gaucher disease due to saposin C deficiency
distinguishing_features:
- Loss of a single saposin (C) versus loss of all four saposins in combined deficiency.
evidence:
- reference: PMID:36969110
reference_title: "Combined saposin deficiency: A rare occurrence."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "each of which has a role as a cofactor for the enzymes whose deficiency results in Krabbe disease, metachromatic leukodystrophy, Gaucher disease, and Farber disease"
explanation: "Individual saposins underlie distinct single-deficiency diseases; combined deficiency loses all of them."
- name: Metachromatic leukodystrophy
description: >-
Saposin B is a cofactor for arylsulfatase A; isolated saposin B deficiency causes an
MLD-like phenotype, one component of combined deficiency.
disease_term:
preferred_term: metachromatic leukodystrophy
term:
id: MONDO:0018868
label: metachromatic leukodystrophy
distinguishing_features:
- A single-pathway sulfatide storage disorder, versus combined multi-sphingolipid storage in prosaposin deficiency.
treatments:
- name: Supportive Care
description: >-
No disease-modifying therapy exists; the disorder is fatal in infancy and management is
supportive and palliative.
treatment_term:
preferred_term: Supportive Care
term:
id: NCIT:C15747
label: Supportive Care
definitions:
- name: Clinical case definition of combined saposin deficiency
definition_type: CASE_DEFINITION
description: >-
Combined saposin (prosaposin) deficiency is defined by biallelic PSAP loss-of-function
variants abolishing all four saposins, with combined multi-sphingolipid lysosomal
accumulation and a fatal neonatal neurovisceral storage phenotype.
scope: Disease-level case definition for combined prosaposin deficiency.
evidence:
- reference: PMID:36969110
reference_title: "Combined saposin deficiency: A rare occurrence."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "Combined saposin deficiency (OMIM #611721), an exceedingly rare lysosomal storage disorder, is caused by a mutation in the gene PSAP."
explanation: "Anchors the case definition in PSAP-related combined saposin deficiency."
Combined saposin deficiency (also called combined PSAP/prosaposin deficiency) is an ultra-rare, autosomal recessive lysosomal storage disorder caused by biallelic loss-of-function variants in PSAP, leading to absence of saposins A–D and impaired catabolism of multiple sphingolipids. Clinically, classic cases present neonatally/early infancy with severe neurodegeneration (often with seizures and bulbar dysfunction), hepatosplenomegaly, hematologic abnormalities, and early death. Recent work (2023) created a CRISPR zebrafish psap knockout model that recapitulates demyelination and shows that genetic reduction of acid sphingomyelinase (SMPD1/smpd1) modestly prolongs survival, supporting a mechanistically motivated therapeutic hypothesis for modulating sphingomyelin/ceramide flux in sphingolipidoses. (bhat2023combinedsaposindeficiency pages 1-2, kuchar2009prosaposindeficiencyand pages 2-3, zhang2023azebrafishmodel pages 1-3, zhang2023azebrafishmodel media d6e12bf5)
Combined saposin deficiency is a lysosomal storage disorder due to prosaposin deficiency (loss of saposins A–D), resulting in multi-sphingolipid storage and prominent neurologic and visceral disease. In a 2023 case report, the abstract states: “Combined saposin deficiency (OMIM #611721), an exceedingly rare lysosomal storage disorder, is caused by a mutation in the gene PSAP … The typical manifestation … is of severe neurological features in the neonatal period, hepatosplenomegaly, thrombocytopenia, and early death.” (Bhat et al.; publication date: 2023-03; URL: https://doi.org/10.1016/j.mjafi.2021.01.024) (bhat2023combinedsaposindeficiency pages 1-2)
Not found in the retrieved corpus: Orphanet ORPHA ID, ICD-10/ICD-11 code, MeSH ID. These are likely available in external curated resources (e.g., Orphanet/MeSH browsers), but were not extractable from the retrieved full-text evidence in this run.
Evidence is primarily from individual patient case reports and small case series, plus model organism studies (zebrafish) and mechanistic reviews. (kuchar2009prosaposindeficiencyand pages 1-2, zhang2023azebrafishmodel pages 1-3)
Not established in the retrieved evidence.
Across case literature, classic combined saposin deficiency is described as neonatal-onset severe neurovisceral disease.
Neurologic phenotypes (symptoms/signs) - Seizures/clonic fits and refractory seizures (bhat2023combinedsaposindeficiency pages 1-2, kuchar2009prosaposindeficiencyand pages 1-2) - Hypotonia and neurologic deterioration/regression (bhat2023combinedsaposindeficiency pages 1-2, bhat2023combinedsaposindeficiency pages 2-3) - Bulbar dysfunction: poor suck/swallow coordination, aspiration risk, feeding difficulty requiring tube feeding (bhat2023combinedsaposindeficiency pages 1-2, bhat2023combinedsaposindeficiency pages 2-3) - Progressive neurodegeneration and demyelination/leukodystrophy-like disease (hulkova2001anovelmutation pages 1-2, kuchar2009prosaposindeficiencyand pages 2-3)
Visceral and hematologic phenotypes - Hepatosplenomegaly (bhat2023combinedsaposindeficiency pages 1-2, kuchar2009prosaposindeficiencyand pages 1-2) - Thrombocytopenia and anemia reported (bhat2023combinedsaposindeficiency pages 1-2, li2025prosaposinamultifaceted pages 13-15)
Dermatologic/ocular phenotypes (reported in some cases) - Collodion membrane/ichthyosis-like skin findings reported in one neonatal case report (bhat2023combinedsaposindeficiency pages 1-2) - Optic disc atrophy and cherry-red spot described in PSAP-related severe infantile presentations (kuchar2009prosaposindeficiencyand pages 1-2)
Neuroimaging/pathology - Reported imaging abnormalities include cortical atrophy and white matter abnormalities in case literature, with additional malformations in some cases (bhat2023combinedsaposindeficiency pages 2-3, kuchar2009prosaposindeficiencyand pages 2-3). - Neuropathology in complete PSAP deficiency includes massive cortical neuron loss, astrocytosis, paucity of myelin, and active demyelination. (hulkova2001anovelmutation pages 1-2)
Given early severe neurologic impairment (seizures, feeding/respiratory failure, progressive neurodegeneration), the impact on daily functioning is profound; quantitative QoL instruments (EQ-5D/SF-36) were not reported in the retrieved evidence.
(These term suggestions are ontology mappings for KB use; they are consistent with phenotypes described in the cited case reports.) (bhat2023combinedsaposindeficiency pages 1-2, kuchar2009prosaposindeficiencyand pages 1-2)
Representative pathogenic variants (case-based; not exhaustive): - Frameshift deletion: PSAP c.803delG causing premature stop and complete deficiency (Hulkova et al., 2001; publication date 2001-04; URL: https://doi.org/10.1093/hmg/10.9.927) (hulkova2001anovelmutation pages 1-2) - Splice-acceptor variant: homozygous splice-acceptor mutation upstream of exon 10 leading to premature stop/low transcript (Kuchař et al., 2009; publication date 2009-03; URL: https://doi.org/10.1002/ajmg.a.32712) (kuchar2009prosaposindeficiencyand pages 1-2) - Truncating frameshift: c.1419_1422delCTTC (p.Phe474fsTer3) reported homozygous in a neonatal case with early fatality (Bhat et al., 2023; URL: https://doi.org/10.1016/j.mjafi.2021.01.024) (bhat2023combinedsaposindeficiency pages 2-3)
Not established for combined saposin deficiency in the retrieved evidence.
No established environmental/lifestyle/infectious causal contributors were identified in the retrieved evidence; the disorder is primarily monogenic. (shaimardanova2023genetherapyof pages 2-4)
Upstream trigger: biallelic PSAP loss-of-function → prosaposin deficiency → absence of saposins A–D (hulkova2001anovelmutation pages 1-2).
Primary biochemical defect: failed activation/assistance of multiple lysosomal sphingolipid hydrolases → impaired degradation of diverse sphingolipids and glycosphingolipids, including lactosylceramide and glucosylceramide (hulkova2001anovelmutation pages 7-8, hulkova2001anovelmutation pages 1-2).
Downstream cellular/tissue consequences: multi-lipid storage in neurons and visceral tissues, with prominent myelin loss/demyelination, neurodegeneration, and neuroinflammatory responses; systemic storage can involve liver and other viscera. (zhang2023azebrafishmodel pages 5-7, hulkova2001anovelmutation pages 1-2)
Human (complete PSAP deficiency): storage includes (dominant) lactosylceramide and multiple other sphingolipids/glycosphingolipids (GlcCer, Gb3, sulphatides, ceramides; globotetraosylceramide also reported), with demyelination supported by cholesterol ester accumulation in glial phagocytes and myelin paucity. (hulkova2001anovelmutation pages 1-2, hulkova2001anovelmutation pages 8-9)
Zebrafish psap KO (2023): untargeted lipidomics show marked increases in lactosylceramide and hexosylsphingosine, with additional increases in ceramide and sphingomyelin; pathology shows widespread CNS myelin loss and liver foamy storage clusters. (Zhang et al., publication date 2023-06; URL: https://doi.org/10.1242/dmm.049995) (zhang2023azebrafishmodel pages 3-5, zhang2023azebrafishmodel pages 5-7)
In the zebrafish model, proinflammatory cytokines rise before mbpa (myelin basic protein a) loss, followed by NFκB/Jak-Stat activation and microglial activation coincident with onset of myelin loss; astrocyte activation and neuronal loss occur later. (zhang2023azebrafishmodel pages 9-11)
Key cell types implicated (based on zebrafish marker data and human pathology): - Microglia (activated during early disease in zebrafish): CL:0000129 (zhang2023azebrafishmodel pages 9-11) - Astrocytes (gfap activation later): CL:0000127 (zhang2023azebrafishmodel pages 9-11) - Oligodendrocyte lineage dysfunction (mbpa decline without lineage marker loss): oligodendrocyte CL:0000128; oligodendrocyte progenitor cell CL:0002453 (zhang2023azebrafishmodel pages 5-7, zhang2023azebrafishmodel pages 9-11) - Neurons (progressive loss in zebrafish; neuronal storage/loss in human pathology): CL:0000540 (hulkova2001anovelmutation pages 1-2, zhang2023azebrafishmodel pages 9-11)
GO biological process term suggestions (mechanistically aligned): - Lysosomal lumen / lysosome: GO:0005764 (lysosome; cellular component) - Sphingolipid catabolic process: GO:0046512 - Glycosphingolipid catabolic process: GO:0006687 - Myelination: GO:0042552 - Neuroinflammatory response / inflammatory response: GO:0006954 - NF-κB signaling: GO:0043122 - JAK-STAT cascade: GO:0007259
CHEBI term suggestions (stored lipids; examples): - Lactosylceramide (CHEBI term exists; specific identifier not retrieved in this run) - Glucosylceramide - Glucosylsphingosine - Ceramide - Sphingomyelin - Sulfatide
(Only lipid names are directly supported in evidence; mapping to specific CHEBI IDs would require a CHEBI lookup resource not available in this tool run.) (hulkova2001anovelmutation pages 1-2, zhang2023azebrafishmodel pages 5-7)
Zhang et al. 2023 provides a schematic of disease progression and a survival curve demonstrating that smpd1 (acid sphingomyelinase) loss rescues shortened lifespan in psap mutant zebrafish. (zhang2023azebrafishmodel media d6e12bf5, zhang2023azebrafishmodel media 93708f73)
UBERON term suggestions - Brain: UBERON:0000955 - Central nervous system: UBERON:0001017 - Liver: UBERON:0002107 - Spleen: UBERON:0002106
Quantitative prevalence/incidence estimates were not identified in the retrieved evidence.
The disorder is described as extremely rare with “less than 10 cases reported in worldwide literature” in a 2023 case report. (bhat2023combinedsaposindeficiency pages 1-2)
Enzyme activity assays A neonatal combined saposin deficiency case reported reduced lysosomal enzyme activities (skin fibroblasts), including β-glucosidase and β-galactocerebrosidase, supporting the diagnosis. (bhat2023combinedsaposindeficiency pages 1-2)
Urinary sphingolipids Kuchař et al. 2009 emphasizes that “Screening for urinary sphingolipids was crucial to the diagnosis … with electrospray ionization tandem mass spectrometry also providing quantification,” with multiple sphingolipids elevated and Gb3 showing the greatest increase. (publication date 2009-03; URL: https://doi.org/10.1002/ajmg.a.32712) (kuchar2009prosaposindeficiencyand pages 1-2)
Plasma lyso-lipids and macrophage activation markers (2024 update) A 2024 study comparing PSAP- and SCARB2-mediated GCase deficiency reports that plasma glucosylsphingosine and chitotriosidase are increased in PSAP-related cases (similar to GBA1-linked Gaucher disease), while SCARB2 deficiency showed only glucosylsphingosine elevation. (publication date 2024-06-16; URL: https://doi.org/10.3390/ijms25126615) (pavan2024deficiencyofglucocerebrosidase pages 1-2)
Key differentials include other sphingolipidoses and leukodystrophies with overlapping features: - Metachromatic leukodystrophy (including activator-deficient forms) (kuchar2009prosaposindeficiencyand pages 1-2) - Krabbe disease, Gaucher disease, Farber disease (via saposin–enzyme relationships) (bhat2023combinedsaposindeficiency pages 1-2)
No evidence of routine newborn screening inclusion for PSAP deficiency was found in the retrieved corpus.
Systematic survival statistics (e.g., Kaplan–Meier from cohorts) are not available due to extreme rarity.
Published case reports describe supportive care, including respiratory support, feeding support (tube/orogastric), anti-seizure management, skin care (emollients), and infection/sepsis management. (bhat2023combinedsaposindeficiency pages 1-2, bhat2023combinedsaposindeficiency pages 2-3)
Model-organism therapeutic hypothesis (acid sphingomyelinase modulation) - In a 2023 zebrafish model, pharmacologic monomethylfumarate (MMF) did not prolong lifespan, but genetic reduction of acid sphingomyelinase (smpd1) did, suggesting SMPD1/acid sphingomyelinase as a potential target. (zhang2023azebrafishmodel pages 9-11, zhang2023azebrafishmodel media d6e12bf5)
Gene therapy and other platform approaches (review-level) - A 2023 review of gene therapy for sphingolipid metabolic disorders lists general therapeutic modalities used across sphingolipidoses—ERT, SRT, molecular chaperones, HSCT/BMT, supportive care, and gene therapy—and classifies combined saposin deficiency (PSAP; OMIM 611721) as an “extremely rare” fatal nervous-system disorder. (publication date 2023-02; URL: https://doi.org/10.3390/ijms24043627) (shaimardanova2023genetherapyof pages 2-4)
Clinical trials No PSAP/prosaposin deficiency-specific interventional trials were identified in the ClinicalTrials.gov search performed in this run.
(MAXO IDs may require verification against the current MAXO release; included here as KB-oriented suggestions.)
No naturally occurring veterinary disease reports were identified in the retrieved evidence.
A CRISPR-Cas9 zebrafish model of combined saposin deficiency (psap KO) recapitulates key lysosomal storage pathology, with progressive myelin loss and reduced lifespan. The abstract states: “psap zebrafish recapitulated major LSD pathologies including reduced lifespan, lipid storage, impaired locomotion, and severe myelin loss …” and further, “Smpd1 mutagenesis, but not MMF, prolonged lifespan in psap zebrafish…”. (publication date 2023-06; URL: https://doi.org/10.1242/dmm.049995) (zhang2023azebrafishmodel pages 1-3)
This model is a practical platform for mechanistic dissection (neuroinflammation → myelin loss) and therapeutic screening, and provides in vivo evidence supporting SMPD1 as a candidate modifier/target. (zhang2023azebrafishmodel pages 9-11, zhang2023azebrafishmodel media d6e12bf5)
| Category | Summary |
|---|---|
| Disease / identifiers | Combined saposin deficiency; MONDO: MONDO:0012719 (combined PSAP deficiency); OMIM: 611721 (OpenTargets Search: Combined saposin deficiency,Prosaposin deficiency, bhat2023combinedsaposindeficiency pages 1-2) |
| Common synonyms | Prosaposin deficiency, PSAP deficiency, combined PSAP deficiency, combined saposin A/B/C/D deficiency, complete prosaposin deficiency (hulkova2001anovelmutation pages 1-2, kuchar2009prosaposindeficiencyand pages 1-2, kuchar2009prosaposindeficiencyand pages 2-3) |
| Causal gene | PSAP (prosaposin), encoding the precursor cleaved into saposins A–D; loss of both null alleles causes absence of all four saposins (bhat2023combinedsaposindeficiency pages 2-3, bhat2023combinedsaposindeficiency pages 1-2, hulkova2001anovelmutation pages 1-2) |
| Inheritance | Autosomal recessive; reported affected individuals are typically biallelic/homozygous or compound heterozygous for pathogenic PSAP variants (bhat2023combinedsaposindeficiency pages 2-3, bhat2023combinedsaposindeficiency pages 1-2, kuchar2009prosaposindeficiencyand pages 1-2, kuchar2009prosaposindeficiencyand pages 2-3) |
| Typical onset | Usually neonatal/early infantile with severe presentation; literature describes it as a relatively uniform neonatal disease, though rare later childhood presentations have been reported (bhat2023combinedsaposindeficiency pages 1-2, kuchar2009prosaposindeficiencyand pages 1-2, kuchar2009prosaposindeficiencyand pages 2-3, bhat2023combinedsaposindeficiency pages 2-3) |
| Key neurologic phenotypes | Severe neurologic disease with hypotonia, seizures/myoclonus, poor suck/swallow, apnea/respiratory distress, developmental delay/regression, ataxia/extrapyramidal signs, and profound neurodegeneration/demyelination (bhat2023combinedsaposindeficiency pages 1-2, kuchar2009prosaposindeficiencyand pages 1-2, kuchar2009prosaposindeficiencyand pages 2-3, hulkova2001anovelmutation pages 1-2, zhang2023azebrafishmodel pages 1-3) |
| Key visceral / hematologic phenotypes | Hepatosplenomegaly, elevated liver enzymes, thrombocytopenia, anemia; neurovisceral dystrophy is characteristic in classic neonatal cases (bhat2023combinedsaposindeficiency pages 1-2, kuchar2009prosaposindeficiencyand pages 1-2, kuchar2009prosaposindeficiencyand pages 2-3) |
| Skin / eye / other phenotypes | Ichthyosis reported in at least one neonatal case; cherry-red spots and optic disc atrophy reported in PSAP-related severe infantile presentations (bhat2023combinedsaposindeficiency pages 1-2, kuchar2009prosaposindeficiencyand pages 1-2) |
| Imaging / pathology | Brain MRI/neuropathology may show cortical atrophy, white-matter abnormalities/demyelination, gray-matter heterotopias, abnormal gyration, thin corpus callosum, paucity of myelin, active demyelination, neuronal loss, and astrocytosis (bhat2023combinedsaposindeficiency pages 2-3, bhat2023combinedsaposindeficiency pages 1-2, hulkova2001anovelmutation pages 1-2, kuchar2009prosaposindeficiencyand pages 2-3) |
| Core mechanism | Loss of saposins A–D disrupts lysosomal sphingolipid degradation, causing accumulation of multiple sphingolipids (notably lactosylceramide, glucosylceramide, globotriaosylceramide, sulfatides, ceramides) with downstream neuroinflammation and myelin loss (hulkova2001anovelmutation pages 1-2, zhang2023azebrafishmodel pages 3-5, pavan2024deficiencyofglucocerebrosidase pages 1-2) |
| Enzyme assays / biochemical clues | Reduced lysosomal enzyme activities can be seen despite intact enzyme genes, e.g. low β-glucosidase/GCase and β-galactocerebrosidase; PSAP-linked GCase deficiency may show elevated chitotriosidase (bhat2023combinedsaposindeficiency pages 1-2, pavan2024deficiencyofglucocerebrosidase pages 1-2) |
| Urinary sphingolipid findings | Urinary sphingolipid analysis (TLC or ESI-MS/MS) is a key real-world diagnostic tool; multiple sphingolipids are elevated, with globotriaosylceramide (Gb3) reported as markedly increased in one neonatal pSap-d case (kuchar2009prosaposindeficiencyand pages 1-2, kuchar2009prosaposindeficiencyand pages 2-3) |
| Plasma lyso-lipid / biomarker findings | Plasma glucosylsphingosine (lyso-GL1) and chitotriosidase can be elevated in PSAP deficiency; experimental/cellular work also implicates Lyso-Gb3 as elevated in PSAP-knockout models (pavan2024deficiencyofglucocerebrosidase pages 1-2, bhat2023combinedsaposindeficiency pages 1-2) |
| Example pathogenic variants | Reported case variants include c.803delG (frameshift, premature stop) (hulkova2001anovelmutation pages 1-2); splice acceptor mutation upstream of exon 10 causing premature stop/low transcript (kuchar2009prosaposindeficiencyand pages 1-2); c.1419_1422delCTTC, p.Phe474fs null allele (bhat2023combinedsaposindeficiency pages 2-3); c.G1228T, p.Glu410Ter (kuchar2009prosaposindeficiencyand pages 1-2) |
| Reported outcomes / prognosis | Prognosis is generally poor in classic combined deficiency: several neonatal/infantile cases died in the neonatal period, at 55 days, by 4 months, or by 5 months from respiratory failure, infections, sepsis, or multiorgan failure (bhat2023combinedsaposindeficiency pages 1-2, kuchar2009prosaposindeficiencyand pages 1-2, kuchar2009prosaposindeficiencyand pages 2-3, bhat2023combinedsaposindeficiency pages 2-3) |
| Current treatment / implementation | No disease-specific approved therapy identified; management is largely supportive (antiepileptics, respiratory support, tube/gastrostomy feeding, skin care). A 2023 zebrafish model suggested acid sphingomyelinase/SMPD1 modulation as a potential therapeutic target, while monomethyl fumarate did not improve survival in that model (bhat2023combinedsaposindeficiency pages 1-2, zhang2023azebrafishmodel pages 1-3, zhang2023azebrafishmodel pages 9-11, zhang2023azebrafishmodel media d6e12bf5) |
Table: This table condenses the most useful clinical, molecular, diagnostic, and prognostic facts about combined saposin deficiency/combined PSAP deficiency from case reports and recent mechanistic studies. It is designed as a quick-reference artifact for a disease knowledge base entry.
References
(bhat2023combinedsaposindeficiency pages 1-2): Vivek Bhat, R.W. Thergaonkar, Manisha Thakur, and T. Rajkamal. Combined saposin deficiency: a rare occurrence. Medical Journal Armed Forces India, 79:238-240, Mar 2023. URL: https://doi.org/10.1016/j.mjafi.2021.01.024, doi:10.1016/j.mjafi.2021.01.024. This article has 3 citations.
(kuchar2009prosaposindeficiencyand pages 2-3): Ladislav Kuchař, Jana Ledvinová, Martin Hřebíček, Helena Myšková, Lenka Dvořáková, Linda Berná, Petr Chrastina, Befekadu Asfaw, Milan Elleder, Margret Petermöller, Heidi Mayrhofer, Martin Staudt, Ingeborg Krägeloh‐Mann, Barbara C. Paton, and Klaus Harzer. Prosaposin deficiency and saposin b deficiency (activator‐deficient metachromatic leukodystrophy): report on two patients detected by analysis of urinary sphingolipids and carrying novel psap gene mutations. American Journal of Medical Genetics Part A, 149A:613-621, Mar 2009. URL: https://doi.org/10.1002/ajmg.a.32712, doi:10.1002/ajmg.a.32712. This article has 104 citations.
(zhang2023azebrafishmodel pages 1-3): Tejia Zhang, Ivy Alonzo, Chris Stubben, Yijie Geng, Chelsea Herdman, Nancy Chandler, Kim P. Doane, Brock R. Pluimer, Sunia A. Trauger, and Randall T. Peterson. A zebrafish model of combined saposin deficiency identifies acid sphingomyelinase as a potential therapeutic target. Disease Models & Mechanisms, Jun 2023. URL: https://doi.org/10.1242/dmm.049995, doi:10.1242/dmm.049995. This article has 14 citations and is from a domain leading peer-reviewed journal.
(zhang2023azebrafishmodel media d6e12bf5): Tejia Zhang, Ivy Alonzo, Chris Stubben, Yijie Geng, Chelsea Herdman, Nancy Chandler, Kim P. Doane, Brock R. Pluimer, Sunia A. Trauger, and Randall T. Peterson. A zebrafish model of combined saposin deficiency identifies acid sphingomyelinase as a potential therapeutic target. Disease Models & Mechanisms, Jun 2023. URL: https://doi.org/10.1242/dmm.049995, doi:10.1242/dmm.049995. This article has 14 citations and is from a domain leading peer-reviewed journal.
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(kuchar2009prosaposindeficiencyand pages 1-2): Ladislav Kuchař, Jana Ledvinová, Martin Hřebíček, Helena Myšková, Lenka Dvořáková, Linda Berná, Petr Chrastina, Befekadu Asfaw, Milan Elleder, Margret Petermöller, Heidi Mayrhofer, Martin Staudt, Ingeborg Krägeloh‐Mann, Barbara C. Paton, and Klaus Harzer. Prosaposin deficiency and saposin b deficiency (activator‐deficient metachromatic leukodystrophy): report on two patients detected by analysis of urinary sphingolipids and carrying novel psap gene mutations. American Journal of Medical Genetics Part A, 149A:613-621, Mar 2009. URL: https://doi.org/10.1002/ajmg.a.32712, doi:10.1002/ajmg.a.32712. This article has 104 citations.
(bhat2023combinedsaposindeficiency pages 2-3): Vivek Bhat, R.W. Thergaonkar, Manisha Thakur, and T. Rajkamal. Combined saposin deficiency: a rare occurrence. Medical Journal Armed Forces India, 79:238-240, Mar 2023. URL: https://doi.org/10.1016/j.mjafi.2021.01.024, doi:10.1016/j.mjafi.2021.01.024. This article has 3 citations.
(hulkova2001anovelmutation pages 1-2): H Hulkova, M Cervenkova, and J Ledvinova. A novel mutation in the coding region of the prosaposin gene leads to a complete deficiency of prosaposin and saposins, and is associated with a complex sphingolipidosis dominated by lactosylceramide accumulation. Human Molecular Genetics, 10:927-940, Apr 2001. URL: https://doi.org/10.1093/hmg/10.9.927, doi:10.1093/hmg/10.9.927. This article has 139 citations and is from a domain leading peer-reviewed journal.
(zhang2023azebrafishmodel pages 5-7): Tejia Zhang, Ivy Alonzo, Chris Stubben, Yijie Geng, Chelsea Herdman, Nancy Chandler, Kim P. Doane, Brock R. Pluimer, Sunia A. Trauger, and Randall T. Peterson. A zebrafish model of combined saposin deficiency identifies acid sphingomyelinase as a potential therapeutic target. Disease Models & Mechanisms, Jun 2023. URL: https://doi.org/10.1242/dmm.049995, doi:10.1242/dmm.049995. This article has 14 citations and is from a domain leading peer-reviewed journal.
(shaimardanova2023genetherapyof pages 2-4): Alisa A. Shaimardanova, Valeriya V. Solovyeva, Shaza S. Issa, and Albert A. Rizvanov. Gene therapy of sphingolipid metabolic disorders. International Journal of Molecular Sciences, 24:3627, Feb 2023. URL: https://doi.org/10.3390/ijms24043627, doi:10.3390/ijms24043627. This article has 34 citations.
(li2025prosaposinamultifaceted pages 13-15): Xin Li and Liang Guo. Prosaposin: a multifaceted protein orchestrating biological processes and diseases. Cells, 14:1131, Jul 2025. URL: https://doi.org/10.3390/cells14151131, doi:10.3390/cells14151131. This article has 10 citations.
(hulkova2001anovelmutation pages 7-8): H Hulkova, M Cervenkova, and J Ledvinova. A novel mutation in the coding region of the prosaposin gene leads to a complete deficiency of prosaposin and saposins, and is associated with a complex sphingolipidosis dominated by lactosylceramide accumulation. Human Molecular Genetics, 10:927-940, Apr 2001. URL: https://doi.org/10.1093/hmg/10.9.927, doi:10.1093/hmg/10.9.927. This article has 139 citations and is from a domain leading peer-reviewed journal.
(hulkova2001anovelmutation pages 8-9): H Hulkova, M Cervenkova, and J Ledvinova. A novel mutation in the coding region of the prosaposin gene leads to a complete deficiency of prosaposin and saposins, and is associated with a complex sphingolipidosis dominated by lactosylceramide accumulation. Human Molecular Genetics, 10:927-940, Apr 2001. URL: https://doi.org/10.1093/hmg/10.9.927, doi:10.1093/hmg/10.9.927. This article has 139 citations and is from a domain leading peer-reviewed journal.
(zhang2023azebrafishmodel pages 3-5): Tejia Zhang, Ivy Alonzo, Chris Stubben, Yijie Geng, Chelsea Herdman, Nancy Chandler, Kim P. Doane, Brock R. Pluimer, Sunia A. Trauger, and Randall T. Peterson. A zebrafish model of combined saposin deficiency identifies acid sphingomyelinase as a potential therapeutic target. Disease Models & Mechanisms, Jun 2023. URL: https://doi.org/10.1242/dmm.049995, doi:10.1242/dmm.049995. This article has 14 citations and is from a domain leading peer-reviewed journal.
(zhang2023azebrafishmodel pages 9-11): Tejia Zhang, Ivy Alonzo, Chris Stubben, Yijie Geng, Chelsea Herdman, Nancy Chandler, Kim P. Doane, Brock R. Pluimer, Sunia A. Trauger, and Randall T. Peterson. A zebrafish model of combined saposin deficiency identifies acid sphingomyelinase as a potential therapeutic target. Disease Models & Mechanisms, Jun 2023. URL: https://doi.org/10.1242/dmm.049995, doi:10.1242/dmm.049995. This article has 14 citations and is from a domain leading peer-reviewed journal.
(zhang2023azebrafishmodel media 93708f73): Tejia Zhang, Ivy Alonzo, Chris Stubben, Yijie Geng, Chelsea Herdman, Nancy Chandler, Kim P. Doane, Brock R. Pluimer, Sunia A. Trauger, and Randall T. Peterson. A zebrafish model of combined saposin deficiency identifies acid sphingomyelinase as a potential therapeutic target. Disease Models & Mechanisms, Jun 2023. URL: https://doi.org/10.1242/dmm.049995, doi:10.1242/dmm.049995. This article has 14 citations and is from a domain leading peer-reviewed journal.
(pavan2024deficiencyofglucocerebrosidase pages 17-18): Eleonora Pavan, Paolo Peruzzo, Silvia Cattarossi, Natascha Bergamin, Andrea Bordugo, Annalisa Sechi, Maurizio Scarpa, Jessica Biasizzo, Fabiana Colucci, and Andrea Dardis. Deficiency of glucocerebrosidase activity beyond gaucher disease: psap and limp-2 dysfunctions. International Journal of Molecular Sciences, 25:6615, Jun 2024. URL: https://doi.org/10.3390/ijms25126615, doi:10.3390/ijms25126615. This article has 10 citations.
(pavan2024deficiencyofglucocerebrosidase pages 1-2): Eleonora Pavan, Paolo Peruzzo, Silvia Cattarossi, Natascha Bergamin, Andrea Bordugo, Annalisa Sechi, Maurizio Scarpa, Jessica Biasizzo, Fabiana Colucci, and Andrea Dardis. Deficiency of glucocerebrosidase activity beyond gaucher disease: psap and limp-2 dysfunctions. International Journal of Molecular Sciences, 25:6615, Jun 2024. URL: https://doi.org/10.3390/ijms25126615, doi:10.3390/ijms25126615. This article has 10 citations.