Chlorophacinone Poisoning

Environmental Pathograph 15 Show in embeddings browser

Chlorophacinone poisoning is an acquired, vitamin K-antagonist coagulopathy caused by ingestion of, or other exposure to, the indanedione anticoagulant rodenticide chlorophacinone. Chlorophacinone inhibits vitamin K 2,3-epoxide reductase, so the reduced vitamin K needed as cofactor for hepatic gamma-carboxylation is not regenerated and the vitamin K-dependent coagulation factors II, VII, IX and X are secreted in an under-carboxylated, functionally inactive form. The resulting coagulopathy presents after a latent interval with mucocutaneous and internal bleeding and, because chlorophacinone accumulates in liver and is eliminated slowly, it can persist for weeks to months and rebound whenever vitamin K replacement is withdrawn.

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Mappings
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Pathophys.
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Phenotypes
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Gaps
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Pathograph
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Medical Actions
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Differentials
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Models
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References
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Deep Research
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Classifications

Harrison's Part
POISONING ENVENOMATION
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Mappings

MONDO
MONDO:0029000 poisoning Not Yet Curated
skos:broadMatch dismech
MONDO has no chlorophacinone-, indanedione-, or rodenticide-specific poisoning term. MONDO:0029000 is the nearest ancestor concept and is recorded as a broad cross-reference only.
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Discussions and Knowledge Gaps

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Does loss of gamma-carboxylation of the anticoagulant proteins C and S explain the thrombotic events reported in anticoagulant rodenticide poisoning?
KNOWLEDGE GAP protein_c_s_paradoxical_thrombosis
Proteins C and S are vitamin K-dependent substrates of the same hepatic carboxylase as factors II, VII, IX and X, so a vitamin K antagonist depletes anticoagulant and procoagulant proteins together. Thrombotic events, including a fatal cerebral vein thrombosis reported as a suspected chlorophacinone poisoning, occur in this class and are difficult to reconcile with pure anticoagulation. No cited source here measures protein C or protein S activity in a chlorophacinone poisoning, so the mechanism is left as an open question rather than curated as a causal edge.
Show evidence (2 references)
PMID:16716547 SUPPORT DIRECT Human Clinical
"The authors report a case of suspicious chlorophacinone poisoning with a problematic diagnosis."
Reports a fatal thrombotic event in a chlorophacinone poisoning. The paper's own wording is "suspicious" with a "problematic diagnosis", so it is cited here as a case that raises the question, not as a settled attribution.
PMID:26239439 SUPPORT INDIRECT Human Clinical
"Long-acting anticoagulant rodenticide-induced paradoxical thrombosis and thrombotic complications accompanying hemostatic therapy have also been observed."
Confirms paradoxical thrombosis is observed across the class and separates it from thrombosis caused by haemostatic therapy. Marked indirect because it reports the observation without testing a mechanism.
Why does chlorophacinone-induced hypocoagulability persist after plasma chlorophacinone concentrations have fallen to low values?
KNOWLEDGE GAP persistence_after_plasma_clearance
In a monitored human poisoning the hypocoagulability outlasted the measurable plasma concentration. The treating authors offered two candidate explanations, accumulation in target cells and an unidentified active metabolite, and distinguished neither. Which of the two operates determines whether plasma chlorophacinone concentration is a usable guide to stopping vitamin K therapy.
Proposed experiments
Paired hepatic and plasma chlorophacinone measurement with metabolite profiling
chlorophacinone_metabolite_vs_compartment
Measure chlorophacinone and its metabolites in plasma alongside INR through the resolution phase of human poisonings, with untargeted metabolite profiling, to determine whether a persisting parent compound compartment or an active metabolite accounts for the residual effect.
Show evidence (3 references)
PMID:23109180 SUPPORT INDIRECT Model Organism
"Extensive metabolism of chlorophacinone was also found, and was similar (in nature and proportion of metabolites) across strains (3 OH-metabolites identified)."
Three hydroxy-metabolites of chlorophacinone have been identified in rat, so the metabolite arm of this question is not that no metabolite is known but that none has been shown active in humans. Marked indirect because the work is in rat.
PMID:23109180 SUPPORT INDIRECT Model Organism
"Accumulation of chlorophacinone occurs from day 1 to day 4, and an equilibrium is reached, suggesting rapid elimination."
Cuts against the tissue-accumulation arm: hepatic chlorophacinone reaches a plateau within four days in rat, which the authors read as rapid elimination rather than indefinite retention. Marked indirect because the work is in rat and because the human coagulopathy is what needs explaining.
PMID:10216974 SUPPORT INDIRECT Human Clinical
"Chlorophacinone accumulation in target cells or existence of an unidentified metabolite may explain persistence of the hypocoagulability syndrome at low plasmatic concentrations of chlorophacinone."
States the unresolved alternative explanations directly.
Should chlorophacinone be curated as a first-generation anticoagulant rodenticide or as a long-acting anticoagulant rodenticide?
INTERPRETATION first_generation_versus_long_acting
Two authoritative sources place chlorophacinone in opposite groups, and both are right on their own terms. Watt and colleagues group it with the long-acting rodenticides on human duration of effect. Esther and colleagues list it with warfarin and coumatetralyl as first-generation, which is a statement about rodent potency and the number of feeds needed to kill a rat. "Generation" is a rodent-efficacy term and "long-acting" is a human-toxicology term, so chlorophacinone is first-generation by potency and long-acting by duration. The distinction matters clinically, because the first-generation label wrongly implies a warfarin-length course of treatment. This entry curates the human-toxicology reading and records the conflict rather than resolving it silently.
Show evidence (2 references)
PMID:16499407 SUPPORT DIRECT Other
"This group includes the second generation 4-hydroxycoumarins brodifacoum, bromadiolone, difenacoum, flocoumafen and the indanedione derivatives chlorophacinone and diphacinone."
Places chlorophacinone in the long-acting anticoagulant rodenticide group.
PMID:24781908 SUPPORT DIRECT Other
"Anticoagulants of the first generation (warfarin, chlorophacinone, coumatetralyl) as well as bromadiolone and difenacoum are not an option for the control of resistant Norway rats."
Places chlorophacinone in the first-generation group, in a rodent-control context.
Do indandione anticoagulants, chlorophacinone among them, uncouple oxidative phosphorylation, and does that contribute to human toxicity beyond the coagulopathy?
KNOWLEDGE GAP indandione_mitochondrial_uncoupling
Toxicology reference texts repeatedly describe the indandiones as uncouplers of oxidative phosphorylation, a property the 4-hydroxycoumarins are said to lack, and attribute cardiopulmonary and neurologic injury in laboratory rodents to it. The claim is not curated here because no primary source for it could be located: PubMed queries pairing chlorophacinone, and separately indandione, diphacinone and pindone, with uncoupling, mitochondria and oxidative phosphorylation returned no records. The gap is recorded rather than the claim, because a widely repeated mechanism with no retrievable primary citation is worth flagging. Note that chlorophacinone does have a documented off-target activity, FXR antagonism, cited below; the absent evidence is for uncoupling in particular, not for off-target action in general.
Proposed experiments
Respirometry of isolated mitochondria exposed to chlorophacinone
chlorophacinone_mitochondrial_respirometry
Measure oxygen consumption, membrane potential and ATP synthesis in isolated hepatic and cardiac mitochondria across a chlorophacinone concentration range spanning those reached in human poisoning, against a 4-hydroxycoumarin comparator and a known uncoupler control, to establish whether the uncoupling property exists and at what concentration.
The cited evidence item records a different off-target mechanism rather than the uncoupling claim itself. No source is offered for uncoupling, because that is the point of the entry: attaching a reference that does not make the claim would defeat it.
Show evidence (1 reference)
PMID:27773686 SUPPORT INDIRECT In Vitro
"Our results showed that chlorophacinone and ivermectin had distinct modes of action (MOA) in modulating FXR-coregulator interactions and compound selectivity against the four aforementioned functionally-relevant nuclear receptors."
Chlorophacinone has a documented off-target activity, antagonism of the nuclear receptor FXR in a validated screen. It is cited here so this gap is not read as "chlorophacinone has no off-target activity"; what lacks a primary source is uncoupling specifically. Marked indirect because the assays are cell-based and the paper makes no claim about human poisoning.
Does the published argument against using cytochrome P450 inducers in long-acting anticoagulant rodenticide poisoning apply to chlorophacinone?
INTERPRETATION cyp_induction_transferability
This entry curates phenobarbital enzyme induction as a reported adjunct. A published position argues against CYP inducers in this poisoning, but its reasoning is specific to brodifacoum, which the authors state does not undergo significant hepatic metabolism. Chlorophacinone does: three hydroxy-metabolites have been identified and metabolism is described as extensive in rat. The argument therefore does not obviously transfer, and the two chlorophacinone reports that used phenobarbital are uncontrolled single patients. Recorded as an open interpretation rather than settled either way, because the safety objection about sedating a bleeding patient stands regardless of the metabolism question.
Show evidence (3 references)
PMID:30689138 SUPPORT INDIRECT Other
"Therefore, we propose that CYP inducers should not be used to accelerate the clearance of brodifacoum from poisoned patients, but that alternative approaches such as reducing enterohepatic recirculation of brodifacoum, or using lipid emulsions to scavenge brodifacoum throughout the body, be considered."
States the position being weighed, in full: the authors do not simply reject enzyme induction, they redirect to interrupting enterohepatic recirculation or scavenging the drug. Marked indirect because it is a proposal about brodifacoum, not chlorophacinone.
PMID:30689138 SUPPORT INDIRECT Other
"unlike warfarin, brodifacoum does not undergo significant metabolism in the liver, nor have the effects of phenobarbital on vitamin K1 metabolism been previously determined"
Gives the premise on which that position rests, which is the premise that may not hold for chlorophacinone. Marked indirect for the same reason.
PMID:23109180 SUPPORT INDIRECT Model Organism
"Extensive metabolism of chlorophacinone was also found, and was similar (in nature and proportion of metabolites) across strains (3 OH-metabolites identified)."
Chlorophacinone, unlike brodifacoum, is extensively metabolised, which is why the argument may not transfer. Marked indirect because the work is in rat.
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Pathophysiology

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Systemic Chlorophacinone Exposure
Chlorophacinone enters the body by ingestion of bait or concentrate. Inhalational and transcutaneous routes are documented for the anticoagulant rodenticides as a class; the cited source does not attribute either specifically to chlorophacinone. Ingested doses reported in human cases span roughly 100 mg to nearly 2 g, and plasma concentrations after a large deliberate ingestion reach the tens of mg/L.
Show evidence (3 references)
PMID:10216974 SUPPORT DIRECT Human Clinical
"Comprehensive testing for abused and therapeutic drugs in blood confirmed chlorophacinone (maximum plasma level: 27.6 mg/L), an antivitamin K (AVK) rodenticide."
Documents measured systemic chlorophacinone exposure in a human poisoning and identifies the compound as a vitamin K antagonist.
PMID:10216974 SUPPORT DIRECT Human Clinical
"A 33-year-old man was admitted 8 hours after voluntary ingestion of 1875 mg of chlorophacinone (C'Operat 750 mL)."
Gives the ingested dose in a deliberate human chlorophacinone poisoning.
PMID:26239439 SUPPORT INDIRECT Human Clinical
"Inhalational, transcutaneous, and oral routes of exposure have been documented."
Establishes the routes of exposure for the long-acting anticoagulant rodenticide class. Marked indirect because the review reports routes for the class as a whole and does not attribute each route to chlorophacinone specifically.
Vitamin K Epoxide Reductase Inhibition
Chlorophacinone inhibits the vitamin K 2,3-epoxide reductase complex (VKORC1) in the hepatocyte endoplasmic reticulum. VKORC1 normally reduces vitamin K 2,3-epoxide back to vitamin K hydroquinone; blocking it halts the vitamin K cycle at the epoxide step.
hepatocyte CL:0000182 Cell Ontology (CL) Relation: this pathophysiological event involves this cell type This pathophysiological event involves hepatocyte (CL:0000182). CL:0000182 is a cell type from the Cell Ontology.
VKORC1 hgnc:23663 HUGO Gene Nomenclature Committee (hgnc) Relation: this pathophysiological event involves this gene This pathophysiological event involves VKORC1 (hgnc:23663). hgnc:23663 is a gene from the HUGO Gene Nomenclature Committee.
vitamin K epoxide reductase activity GO:0047057 Gene Ontology (GO) Relation: this pathophysiological event involves this molecular function This pathophysiological event involves decreased vitamin K epoxide reductase activity, annotated with vitamin-K-epoxide reductase (warfarin-sensitive) activity (GO:0047057). GO:0047057 is a molecular function from the Gene Ontology. ↓ DECREASED
Show evidence (4 references)
PMID:26239439 SUPPORT INDIRECT Other
"Long-acting anticoagulant rodenticides (LAARs) inhibit vitamin K epoxide reductase (VKOR)."
Names VKOR as the molecular target for the long-acting anticoagulant rodenticides. Marked indirect because the sentence is class-level and does not name chlorophacinone.
PMID:35970209 SUPPORT INDIRECT Computational
"Computational analysis of binding predictions found out that the brown rat S149I mutation predicted a high reduction of the binding affinity of chlorophacinone and brodifacoum ARs"
Chlorophacinone is modelled as a VKORC1 ligand whose binding is abolished by a VKORC1 active-site substitution, which is evidence that VKORC1 is its target. Marked indirect because the binding is predicted computationally, in rat VKORC1 rather than human.
PMID:31857739 SUPPORT INDIRECT Other
"The mechanism of action is by inhibition of vitamin K epoxide reductase, resulting in the inability of the body to recycle vitamin K."
States epoxide reductase inhibition and the resulting failure to recycle vitamin K. Marked indirect because the review covers the long-acting rodenticides as a class. Note also that the review frames the class as warfarin derivatives, which chlorophacinone is not: it is an indanedione, so the review's structural reasoning about bulky aromatic sidechains does not carry over even though the enzyme target does.
+ 1 more reference
Depletion of the Reduced Vitamin K Pool
The hepatic pool of reduced vitamin K (hydroquinone) is depleted because the epoxide formed at each carboxylation cycle cannot be recycled. Dietary vitamin K intake alone does not replace it at the rate the cycle consumes it, which is why exogenous vitamin K1 in gram-scale cumulative doses is the antidote.
vitamin K metabolic process GO:0042373 Gene Ontology (GO) Relation: this pathophysiological event involves this biological process This pathophysiological event involves decreased vitamin K metabolic process (GO:0042373). GO:0042373 is a biological process from the Gene Ontology. ↓ DECREASED
Show evidence (1 reference)
PMID:3222685 SUPPORT DIRECT Human Clinical
"Under high dose vitamin K therapy the Quick was rapidly corrected but fell again on each vitamin K withdrawal."
Correction on exogenous vitamin K and relapse on its withdrawal is the clinical signature of a depleted, pharmacologically unreplenishable reduced vitamin K pool in a chlorophacinone-poisoned patient.
Impaired Gamma-Carboxylation of Vitamin K-Dependent Clotting Factors
Hepatic gamma-glutamyl carboxylase can no longer convert glutamate residues in the Gla domains of the vitamin K-dependent proteins to gamma-carboxyglutamate. The affected proteins are prothrombin (factor II) and factors VII, IX and X, together with the anticoagulant proteins C and S. Under-carboxylated Gla domains cannot chelate calcium and so cannot dock the factor onto anionic phospholipid membranes.
hepatocyte CL:0000182 Cell Ontology (CL) Relation: this pathophysiological event involves this cell type This pathophysiological event involves hepatocyte (CL:0000182). CL:0000182 is a cell type from the Cell Ontology.
GGCX hgnc:4247 HUGO Gene Nomenclature Committee (hgnc) Relation: this pathophysiological event involves this gene This pathophysiological event involves GGCX (hgnc:4247). hgnc:4247 is a gene from the HUGO Gene Nomenclature Committee. F2 hgnc:3535 HUGO Gene Nomenclature Committee (hgnc) Relation: this pathophysiological event involves this gene This pathophysiological event involves F2 (hgnc:3535). hgnc:3535 is a gene from the HUGO Gene Nomenclature Committee. F7 hgnc:3544 HUGO Gene Nomenclature Committee (hgnc) Relation: this pathophysiological event involves this gene This pathophysiological event involves F7 (hgnc:3544). hgnc:3544 is a gene from the HUGO Gene Nomenclature Committee. F9 hgnc:3551 HUGO Gene Nomenclature Committee (hgnc) Relation: this pathophysiological event involves this gene This pathophysiological event involves F9 (hgnc:3551). hgnc:3551 is a gene from the HUGO Gene Nomenclature Committee. F10 hgnc:3528 HUGO Gene Nomenclature Committee (hgnc) Relation: this pathophysiological event involves this gene This pathophysiological event involves F10 (hgnc:3528). hgnc:3528 is a gene from the HUGO Gene Nomenclature Committee. PROC hgnc:9451 HUGO Gene Nomenclature Committee (hgnc) Relation: this pathophysiological event involves this gene This pathophysiological event involves PROC (hgnc:9451). hgnc:9451 is a gene from the HUGO Gene Nomenclature Committee. PROS1 hgnc:9456 HUGO Gene Nomenclature Committee (hgnc) Relation: this pathophysiological event involves this gene This pathophysiological event involves PROS1 (hgnc:9456). hgnc:9456 is a gene from the HUGO Gene Nomenclature Committee.
peptidyl-glutamic acid carboxylation GO:0017187 Gene Ontology (GO) Relation: this pathophysiological event involves this biological process This pathophysiological event involves decreased peptidyl-glutamic acid carboxylation (GO:0017187). GO:0017187 is a biological process from the Gene Ontology. ↓ DECREASED
Show evidence (1 reference)
PMID:16499407 SUPPORT INDIRECT Other
"Anticoagulant rodenticides inhibit vitamin K(1)-2,3 epoxide reductase and thus the synthesis of vitamin K and subsequently clotting factors II, VII, IX and X."
Identifies factors II, VII, IX and X as the affected proteins. Marked indirect because the abstract does not itself use the term gamma-carboxylation.
Functional Deficiency of Coagulation Factors II, VII, IX and X
Circulating activity of prothrombin and factors VII, IX and X falls. Because factor VII has the shortest half-life of the four, the prothrombin time and INR move first; the activated partial thromboplastin time follows as factors IX, X and II decline.
F2 hgnc:3535 HUGO Gene Nomenclature Committee (hgnc) Relation: this pathophysiological event involves this gene This pathophysiological event involves F2 (hgnc:3535). hgnc:3535 is a gene from the HUGO Gene Nomenclature Committee. F7 hgnc:3544 HUGO Gene Nomenclature Committee (hgnc) Relation: this pathophysiological event involves this gene This pathophysiological event involves F7 (hgnc:3544). hgnc:3544 is a gene from the HUGO Gene Nomenclature Committee. F9 hgnc:3551 HUGO Gene Nomenclature Committee (hgnc) Relation: this pathophysiological event involves this gene This pathophysiological event involves F9 (hgnc:3551). hgnc:3551 is a gene from the HUGO Gene Nomenclature Committee. F10 hgnc:3528 HUGO Gene Nomenclature Committee (hgnc) Relation: this pathophysiological event involves this gene This pathophysiological event involves F10 (hgnc:3528). hgnc:3528 is a gene from the HUGO Gene Nomenclature Committee.
Show evidence (2 references)
PMID:3222685 SUPPORT DIRECT Human Clinical
"Prothrombin time (and vitamin K dependent factors VII and X) finally normalized only 7 weeks after chlorophacinone ingestion."
Reports factor VII and factor X activity as the quantities that were depressed and later normalized after chlorophacinone ingestion.
PMID:16499407 SUPPORT INDIRECT Other
"If active bleeding occurs, prothrombin complex concentrate (which contains factors II, VII, IX and X) 50 units/kg, or recombinant activated factor VII 1.2-4.8 mg or fresh frozen plasma 15 mL/kg (if no concentrate is available) and phytomenadione 10mg intravenously (100 microg/kg bodyweight for a..."
Replacing exactly factors II, VII, IX and X is the recommended haemostatic response, which corroborates that those four are the deficient proteins. Marked indirect because this is a therapeutic recommendation, not a direct measurement of factor levels.
Hepatic Accumulation and Prolonged Elimination
Chlorophacinone is lipid-soluble, accumulates in liver and undergoes enterohepatic recirculation, so its biological half-life is long and grows longer with larger ingested doses. This is the property that separates the long-acting rodenticides from warfarin clinically, and it is what makes the coagulopathy last weeks rather than days. Chlorophacinone is nevertheless shorter-acting than the second-generation compounds: the class treatment durations reported in reviews are driven by brodifacoum and should not be read as a chlorophacinone expectation.
Show evidence (3 references)
PMID:16499407 SUPPORT INDIRECT Other
"The greater potency and duration of action of long-acting anticoagulant rodenticides is attributed to their: (i) greater affinity for vitamin K(1)-2,3-epoxide reductase; (ii) ability to disrupt the vitamin K(1)-epoxide cycle at more than one point; (iii) hepatic accumulation; and (iv) unusually..."
Names hepatic accumulation, lipid solubility and enterohepatic circulation as the basis for the prolonged action of the long-acting group, to which the same review assigns chlorophacinone. Marked indirect because the sentence is about the class. Only clauses (iii) and (iv), hepatic accumulation and long biological half-life, are curated on this node. Clauses (i) and (ii), greater VKOR affinity and disruption of the cycle at more than one point, are deliberately not carried over: this entry also records that rodent-efficacy sources call chlorophacinone first-generation, which is a statement about lower potency, so a class-level affinity claim cannot be asserted for it here.
PMID:2769823 SUPPORT DIRECT Human Clinical
"The determination of half-lives was investigated and the results indicate that the greater the quantity absorbed, the longer the half-life."
Measures chlorophacinone half-life in three human poisonings and shows it lengthens with dose, the kinetic behaviour of a saturable accumulating compartment.
PMID:10216974 SUPPORT INDIRECT Human Clinical
"Chlorophacinone accumulation in target cells or existence of an unidentified metabolite may explain persistence of the hypocoagulability syndrome at low plasmatic concentrations of chlorophacinone."
Observes that the coagulopathy outlasts measurable plasma chlorophacinone. Marked indirect because the authors offer tissue accumulation as one of two candidate explanations rather than demonstrating it.
Prolonged Coagulopathy
The clotting defect is global, severe and long-lived. Prothrombin time, INR and activated partial thromboplastin time are grossly prolonged, often beyond the measurable range of the assay, and normalization can take weeks to months after a single large ingestion.
blood coagulation GO:0007596 Gene Ontology (GO) Relation: this pathophysiological event involves this biological process This pathophysiological event involves decreased blood coagulation (GO:0007596). GO:0007596 is a biological process from the Gene Ontology. ↓ DECREASED hemostasis GO:0007599 Gene Ontology (GO) Relation: this pathophysiological event involves this biological process This pathophysiological event involves decreased hemostasis (GO:0007599). GO:0007599 is a biological process from the Gene Ontology. ↓ DECREASED
Show evidence (2 references)
PMID:2769823 SUPPORT DIRECT Human Clinical
"The data collected in this study confirm the particularly prolonged anticoagulant effect of this compound and show that the knowledge of plasma concentrations may be very useful for clinicians"
Confirms the prolonged anticoagulant effect from serial measurements in three human chlorophacinone intoxications.
PMID:3222685 SUPPORT DIRECT Human Clinical
"Her Quick time at admission was less than 10% (Prothrombin time 79 sec., normal control 12 sec.)."
Quantifies the severity of the coagulopathy at presentation in a chlorophacinone poisoning.
Multicompartment Hemorrhage
Bleeding is characteristically multifocal rather than confined to one site. Mucocutaneous bleeding predominates, with haematuria the single most frequently reported manifestation, and haemorrhage into serous cavities, muscle and the central nervous system also occurs.
hemostasis GO:0007599 Gene Ontology (GO) Relation: this pathophysiological event involves this biological process This pathophysiological event involves decreased hemostasis (GO:0007599). GO:0007599 is a biological process from the Gene Ontology. ↓ DECREASED
Show evidence (2 references)
PMID:40974629 SUPPORT INDIRECT Human Clinical
"Multi-organ hemorrhage was the predominant clinical manifestation, with hematuria being the most frequently reported symptom (n = 39)."
Establishes multi-organ haemorrhage as the dominant presentation across 88 human anticoagulant rodenticide poisonings, which is what this node claims. Marked indirect because the series pools rodenticides and does not report a chlorophacinone stratum.
PMID:35000500 SUPPORT INDIRECT Model Organism
"Each of the submitted calves had moderate-to-severe hemorrhage within various tissues and body cavities, including the thymus, subcutaneous region of the neck, mediastinum, lungs, pericardial sac, heart, spleen, perirenal fat, urinary bladder, and skeletal muscle, including the diaphragm."
A chlorophacinone-attributed, liver-residue-confirmed poisoning in which the anatomical distribution of the bleeding was documented at necropsy. Recorded as veterinary in vivo evidence supplementing, not replacing, the human case evidence for this node.
Hypovolemic Shock and Death
Death follows either exsanguinating blood loss with hypovolaemic shock or haemorrhage into the central nervous system. Intracranial haemorrhage is the most commonly reported cause of death in this class of poisoning.
Show evidence (2 references)
PMID:26239439 SUPPORT INDIRECT Human Clinical
"Deaths were most commonly associated with intracranial hemorrhage."
Identifies the leading fatal event across 174 reviewed cases. Marked indirect because the review reports the class and does not stratify by agent.
PMID:40974629 SUPPORT INDIRECT Human Clinical
"Six fatalities occurred and autopsy findings in three cases primarily indicated multi-organ hemorrhage and necrosis."
Reports fatalities and their autopsy correlate in a pooled anticoagulant rodenticide case series. Marked indirect for the same pooling reason.
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Pathograph

Use the checkboxes to hide or show graph categories. Hover nodes for evidence and cross-linked metadata.
Pathograph: causal mechanism network for Chlorophacinone Poisoning Interactive directed graph showing how pathophysiology mechanisms, phenotypes, genetic factors and variants, experimental models, environmental triggers, and treatments relate through causal and linked edges.
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Phenotypes

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Blood 12
Prolonged Prothrombin Time HP:0008151 Human Phenotype Ontology (HP) Relation: this clinical feature is this phenotype This clinical feature is Prolonged prothrombin time (HP:0008151). HP:0008151 is a phenotype from the Human Phenotype Ontology.
Show evidence (2 references)
PMID:3222685 SUPPORT DIRECT Human Clinical
"Her Quick time at admission was less than 10% (Prothrombin time 79 sec., normal control 12 sec.)."
A chlorophacinone-poisoned patient with a prothrombin time of 79 seconds against a 12-second control.
PMID:26239439 SUPPORT INDIRECT Human Clinical
"Most patients present with coagulation assay values beyond measurable limits."
Describes the typical magnitude of the derangement. Marked indirect because it is a class-level statement.
Prolonged Activated Partial Thromboplastin Time Prolonged partial thromboplastin time HP:0003645 Human Phenotype Ontology (HP) Relation: this clinical feature is this phenotype This clinical feature is Prolonged partial thromboplastin time (HP:0003645). HP:0003645 is a phenotype from the Human Phenotype Ontology.
Show evidence (1 reference)
PMID:40974629 SUPPORT INDIRECT Human Clinical
"Coagulation function tests revealed average values of aPTT, PT, and INR of aPTT: 110 (3.71 ∼ 212) s, PT: 100 (11.6 ∼ 300) s and INR: 9 (0.98 ∼ 38.2), respectively, all significantly exceeding normal ranges."
Reports aPTT prolongation alongside PT and INR across 88 anticoagulant rodenticide poisonings. Marked indirect because the series pools agents.
Reduced Factor VII Activity HP:0008169 Human Phenotype Ontology (HP) Relation: this clinical feature is this phenotype This clinical feature is Reduced factor VII activity (HP:0008169). HP:0008169 is a phenotype from the Human Phenotype Ontology.
Show evidence (1 reference)
PMID:3222685 SUPPORT DIRECT Human Clinical
"Prothrombin time (and vitamin K dependent factors VII and X) finally normalized only 7 weeks after chlorophacinone ingestion."
Factor VII activity was depressed and was tracked to normalization in a chlorophacinone poisoning.
Reduced Factor X Activity HP:0008321 Human Phenotype Ontology (HP) Relation: this clinical feature is this phenotype This clinical feature is Reduced factor X activity (HP:0008321). HP:0008321 is a phenotype from the Human Phenotype Ontology.
Show evidence (1 reference)
PMID:3222685 SUPPORT DIRECT Human Clinical
"Prothrombin time (and vitamin K dependent factors VII and X) finally normalized only 7 weeks after chlorophacinone ingestion."
Factor X activity was depressed and was tracked to normalization in a chlorophacinone poisoning.
Epistaxis HP:0000421 Human Phenotype Ontology (HP) Relation: this clinical feature is this phenotype This clinical feature is Epistaxis (HP:0000421). HP:0000421 is a phenotype from the Human Phenotype Ontology.
Show evidence (1 reference)
PMID:16499407 SUPPORT INDIRECT Human Clinical
"Substantial ingestion produces epistaxis, gingival bleeding, widespread bruising, haematomas, haematuria with flank pain, menorrhagia, gastrointestinal bleeding, rectal bleeding and haemorrhage into any internal organ; anaemia may result."
Lists epistaxis among the bleeding manifestations of substantial anticoagulant rodenticide ingestion.
Gingival Bleeding HP:0000225 Human Phenotype Ontology (HP) Relation: this clinical feature is this phenotype This clinical feature is Gingival bleeding (HP:0000225). HP:0000225 is a phenotype from the Human Phenotype Ontology.
Show evidence (1 reference)
PMID:16499407 SUPPORT INDIRECT Human Clinical
"Substantial ingestion produces epistaxis, gingival bleeding, widespread bruising, haematomas, haematuria with flank pain, menorrhagia, gastrointestinal bleeding, rectal bleeding and haemorrhage into any internal organ; anaemia may result."
Lists gingival bleeding among the mucocutaneous manifestations.
Widespread Bruising Bruising susceptibility HP:0000978 Human Phenotype Ontology (HP) Relation: this clinical feature is this phenotype This clinical feature is Bruising susceptibility (HP:0000978). HP:0000978 is a phenotype from the Human Phenotype Ontology.
Show evidence (1 reference)
PMID:16499407 SUPPORT INDIRECT Human Clinical
"Substantial ingestion produces epistaxis, gingival bleeding, widespread bruising, haematomas, haematuria with flank pain, menorrhagia, gastrointestinal bleeding, rectal bleeding and haemorrhage into any internal organ; anaemia may result."
Lists widespread bruising and haematomas among the manifestations.
Gastrointestinal Hemorrhage HP:0002239 Human Phenotype Ontology (HP) Relation: this clinical feature is this phenotype This clinical feature is Gastrointestinal hemorrhage (HP:0002239). HP:0002239 is a phenotype from the Human Phenotype Ontology.
Show evidence (1 reference)
PMID:16499407 SUPPORT INDIRECT Human Clinical
"Substantial ingestion produces epistaxis, gingival bleeding, widespread bruising, haematomas, haematuria with flank pain, menorrhagia, gastrointestinal bleeding, rectal bleeding and haemorrhage into any internal organ; anaemia may result."
Lists gastrointestinal and rectal bleeding among the manifestations.
Hematochezia HP:0002573 Human Phenotype Ontology (HP) Relation: this clinical feature is this phenotype This clinical feature is Hematochezia (HP:0002573). HP:0002573 is a phenotype from the Human Phenotype Ontology.
Show evidence (1 reference)
PMID:16499407 SUPPORT INDIRECT Human Clinical
"Substantial ingestion produces epistaxis, gingival bleeding, widespread bruising, haematomas, haematuria with flank pain, menorrhagia, gastrointestinal bleeding, rectal bleeding and haemorrhage into any internal organ; anaemia may result."
Lists rectal bleeding separately from gastrointestinal bleeding among the manifestations.
Intracranial Hemorrhage HP:0002170 Human Phenotype Ontology (HP) Relation: this clinical feature is this phenotype This clinical feature is Intracranial hemorrhage (HP:0002170). HP:0002170 is a phenotype from the Human Phenotype Ontology.
Show evidence (1 reference)
PMID:26239439 SUPPORT INDIRECT Human Clinical
"Deaths were most commonly associated with intracranial hemorrhage."
Identifies intracranial haemorrhage as the leading fatal event across 174 reviewed cases. Marked indirect because the review is class-level.
Menorrhagia HP:0000132 Human Phenotype Ontology (HP) Relation: this clinical feature is this phenotype This clinical feature is Menorrhagia (HP:0000132). HP:0000132 is a phenotype from the Human Phenotype Ontology.
Show evidence (1 reference)
PMID:16499407 SUPPORT INDIRECT Human Clinical
"Substantial ingestion produces epistaxis, gingival bleeding, widespread bruising, haematomas, haematuria with flank pain, menorrhagia, gastrointestinal bleeding, rectal bleeding and haemorrhage into any internal organ; anaemia may result."
Lists menorrhagia among the bleeding manifestations.
Anemia HP:0001903 Human Phenotype Ontology (HP) Relation: this clinical feature is this phenotype This clinical feature is Anemia (HP:0001903). HP:0001903 is a phenotype from the Human Phenotype Ontology.
Show evidence (1 reference)
PMID:16499407 SUPPORT INDIRECT Human Clinical
"Substantial ingestion produces epistaxis, gingival bleeding, widespread bruising, haematomas, haematuria with flank pain, menorrhagia, gastrointestinal bleeding, rectal bleeding and haemorrhage into any internal organ; anaemia may result."
States that anaemia may follow the blood loss.
Cardiovascular 1
Hypovolemic Shock HP:0031274 Human Phenotype Ontology (HP) Relation: this clinical feature is this phenotype This clinical feature is Hypovolemic shock (HP:0031274). HP:0031274 is a phenotype from the Human Phenotype Ontology.
Show evidence (1 reference)
PMID:16499407 SUPPORT INDIRECT Human Clinical
"Severe blood loss may result in hypovolaemic shock, coma and death."
States hypovolaemic shock as a consequence of severe blood loss in anticoagulant rodenticide poisoning.
Digestive 2
Hemoperitoneum HP:0011854 Human Phenotype Ontology (HP) Relation: this clinical feature is this phenotype This clinical feature is Hemoperitoneum (HP:0011854). HP:0011854 is a phenotype from the Human Phenotype Ontology.
Show evidence (1 reference)
PMID:16499407 SUPPORT INDIRECT Human Clinical
"Spontaneous haemoperitoneum has been described."
Reports spontaneous haemoperitoneum in anticoagulant rodenticide poisoning.
Nausea HP:0002018 Human Phenotype Ontology (HP) Relation: this clinical feature is this phenotype This clinical feature is Nausea (HP:0002018). HP:0002018 is a phenotype from the Human Phenotype Ontology.
Show evidence (1 reference)
PMID:10216974 SUPPORT DIRECT Human Clinical
"The examination revealed excitation and nausea, with a normal prothrombin index (PI)."
Reports nausea at presentation, eight hours after ingestion and before the prothrombin index had fallen.
Genitourinary 1
Hematuria HP:0000790 Human Phenotype Ontology (HP) Relation: this clinical feature is this phenotype This clinical feature is Hematuria (HP:0000790). HP:0000790 is a phenotype from the Human Phenotype Ontology.
Show evidence (2 references)
PMID:40974629 SUPPORT INDIRECT Human Clinical
"Multi-organ hemorrhage was the predominant clinical manifestation, with hematuria being the most frequently reported symptom (n = 39)."
Establishes haematuria as the most frequently reported bleeding manifestation, in 39 of 88 pooled cases. No frequency band is curated from that proportion: the series is a synthesis of published case reports and so is enriched for severe and fatal presentations, and this entry's own epidemiology records that only about 2 per cent of reported exposures produce morbidity at all. The sources support a rank, not a rate. Marked indirect because the denominator covers anticoagulant rodenticides collectively rather than chlorophacinone alone.
PMID:26239439 SUPPORT INDIRECT Human Clinical
"The most frequently reported bleeding sites are mucocutaneous, with hematuria being the most common feature."
An independent review of 174 cases reaches the same ranking. Marked indirect because it gives a rank rather than a proportion, and is class-level.
Nervous System 1
Coma HP:0001259 Human Phenotype Ontology (HP) Relation: this clinical feature is this phenotype This clinical feature is Coma (HP:0001259). HP:0001259 is a phenotype from the Human Phenotype Ontology.
Show evidence (1 reference)
PMID:16499407 SUPPORT INDIRECT Human Clinical
"Severe blood loss may result in hypovolaemic shock, coma and death."
Names coma as a terminal consequence of severe blood loss in anticoagulant rodenticide poisoning. Marked indirect because the sentence is class-level.
Constitutional 1
Flank Pain HP:0030157 Human Phenotype Ontology (HP) Relation: this clinical feature is this phenotype This clinical feature is Flank pain (HP:0030157). HP:0030157 is a phenotype from the Human Phenotype Ontology.
Show evidence (1 reference)
PMID:16499407 SUPPORT INDIRECT Human Clinical
"Substantial ingestion produces epistaxis, gingival bleeding, widespread bruising, haematomas, haematuria with flank pain, menorrhagia, gastrointestinal bleeding, rectal bleeding and haemorrhage into any internal organ; anaemia may result."
Flank pain is reported accompanying haematuria.
Other 1
Acute Compartment Syndrome
Show evidence (1 reference)
PMID:32447894 SUPPORT INDIRECT Human Clinical
"The early manifestations of this patient were mainly coagulation dysfunction, and finally acute osteofascial compartment syndrome."
Reports compartment syndrome following anticoagulant rodenticide poisoning. Marked indirect because the case report names the agent only as an anticoagulant rodenticide, not as chlorophacinone. No phenotype term is bound: HPO has no compartment syndrome term.
💊

Medical Actions

3
High-Dose Prolonged Vitamin K1 (Phytomenadione)
Action: PharmacotherapyNCI Thesaurus (NCIT) Relation: this treatment is this clinical intervention This treatment is Pharmacotherapy (NCIT:C15986). NCIT:C15986 is a clinical intervention from the NCI Thesaurus. NCIT:C15986
Agent: phylloquinone CHEBI:18067 Chemical Entities of Biological Interest (CHEBI) Relation: this treatment uses this therapeutic agent This treatment uses phylloquinone (CHEBI:18067). CHEBI:18067 is a therapeutic agent from Chemical Entities of Biological Interest.
Platform: Small molecule
Phytomenadione (vitamin K1) is the antidote. Supplying vitamin K from outside restores the carboxylase cofactor that the inhibited epoxide reductase can no longer regenerate, and the coagulation profile corrects within hours. Because chlorophacinone persists, the dose required is far above ordinary warfarin reversal doses and treatment must continue for weeks; withdrawal before the drug has cleared produces rebound coagulopathy.
Mechanism Target:
RESTORES Depletion of the Reduced Vitamin K Pool — Exogenous vitamin K1 replenishes the substrate for the carboxylase cofactor pool without requiring the inhibited epoxide reductase.
Show evidence (1 reference)
PMID:3222685 SUPPORT DIRECT Human Clinical
"Under high dose vitamin K therapy the Quick was rapidly corrected but fell again on each vitamin K withdrawal."
Correction on vitamin K and relapse off it, in a chlorophacinone poisoning, is a direct demonstration that vitamin K supply is the limiting quantity this treatment restores.
Show evidence (5 references)
PMID:3222685 SUPPORT DIRECT Human Clinical
"This case emphasizes the need for prolonged clinical and laboratory follow-up for rodenticide intoxications and for vitamin K administration for several weeks."
States the duration of vitamin K therapy required after chlorophacinone poisoning.
PMID:26239439 SUPPORT INDIRECT Human Clinical
"Treatment of acute hemorrhagic symptoms often required intravenous vitamin K1 in excess of 50 to 100 mg; chronic maintenance with 100 mg PO vitamin K1 daily was the most frequently used dose required to suppress coagulopathy."
Gives the dose magnitude actually used across reported cases. Marked indirect because the doses are pooled across long-acting anticoagulant rodenticides rather than reported for chlorophacinone alone.
PMID:26239439 SUPPORT INDIRECT Human Clinical
"Treatment courses averaged 168 days."
Quantifies treatment duration across the reviewed cases. Marked indirect for the same class-level reason, and the figure should not be read as a chlorophacinone expectation: the reviewed long-acting cases are dominated by brodifacoum, whose effect outlasts chlorophacinone's.
+ 2 more references
Coagulation Factor Replacement
Action: PharmacotherapyNCI Thesaurus (NCIT) Relation: this treatment is this clinical intervention This treatment is Pharmacotherapy (NCIT:C15986). NCIT:C15986 is a clinical intervention from the NCI Thesaurus. NCIT:C15986
Agent: four-factor prothrombin complex concentrate NCIT:C208347 NCI Thesaurus (NCIT) Relation: this treatment uses this therapeutic agent This treatment uses four-factor prothrombin complex concentrate (NCIT:C208347). NCIT:C208347 is a therapeutic agent from the NCI Thesaurus.
Platform: Protein replacement
For active bleeding, immediate replacement of the missing factors is given alongside vitamin K1, since vitamin K takes hours to restore carboxylation. Prothrombin complex concentrate is preferred because it contains exactly the four deficient factors; fresh frozen plasma is the fallback, and recombinant activated factor VII has also been used.
Mechanism Target:
BYPASSES Functional Deficiency of Coagulation Factors II, VII, IX and X — Transfused factor concentrate supplies fully carboxylated factors directly, bypassing the blocked hepatic carboxylation step.
Show evidence (1 reference)
PMID:16499407 SUPPORT INDIRECT Other
"If active bleeding occurs, prothrombin complex concentrate (which contains factors II, VII, IX and X) 50 units/kg, or recombinant activated factor VII 1.2-4.8 mg or fresh frozen plasma 15 mL/kg (if no concentrate is available) and phytomenadione 10mg intravenously (100 microg/kg bodyweight for a..."
Specifies replacement of precisely the four deficient factors as the treatment for active bleeding.
Show evidence (2 references)
PMID:26239439 SUPPORT INDIRECT Human Clinical
"Adjunctive hemostatic therapy with recombinant factor VIIa and prothrombin complex concentrate has been reported, and phenobarbital has been used to expedite LAAR metabolism."
Confirms the adjunctive haemostatic agents used in practice. Marked indirect because the review pools long-acting anticoagulant rodenticides.
PMID:31857739 SUPPORT INDIRECT Other
"Treatment for superwarfarin poisoning includes rapid correction of factor deficiencies with either 4-factor prothrombin complex concentrate or fresh frozen plasma in patients with active bleeding"
Names four-factor prothrombin complex concentrate ahead of fresh frozen plasma and confines factor replacement to patients who are bleeding. Marked indirect because the review speaks for the long-acting class.
Phenobarbital Enzyme Induction
Action: PharmacotherapyNCI Thesaurus (NCIT) Relation: this treatment is this clinical intervention This treatment is Pharmacotherapy (NCIT:C15986). NCIT:C15986 is a clinical intervention from the NCI Thesaurus. NCIT:C15986
Agent: phenobarbital CHEBI:8069 Chemical Entities of Biological Interest (CHEBI) Relation: this treatment uses this therapeutic agent This treatment uses phenobarbital (CHEBI:8069). CHEBI:8069 is a therapeutic agent from Chemical Entities of Biological Interest.
Platform: Small molecule
Phenobarbital has been used to accelerate hepatic metabolism of chlorophacinone and shorten the coagulopathy. In one human case the apparent elimination half-life under phenobarbital was 3.27 days, shorter than in previously reported cases. This is an adjunct with limited evidence, not standard care.
Mechanism Target:
INHIBITS Hepatic Accumulation and Prolonged Elimination — Cytochrome P450 induction increases the rate at which chlorophacinone is cleared, shortening the period over which it can inhibit the vitamin K cycle.
Show evidence (1 reference)
PMID:2769823 SUPPORT DIRECT Human Clinical
"An increased elimination was noted when phenobarbital was administered."
Reports increased chlorophacinone elimination on phenobarbital. The observation is from a single uncontrolled case within a three-patient series, so it is weak evidence for a directly stated result.
Show evidence (1 reference)
PMID:10216974 SUPPORT DIRECT Human Clinical
"Under phenobarbital 200 mg/day, chlorophacinone exhibited an apparent elimination half-life (3.27 days) shorter than in previously reported cases."
Quantifies the half-life observed under phenobarbital against a historical comparison. The comparison is with previously reported cases rather than a control arm, so the effect size is not established.
🌍

Environmental Factors

1
Chlorophacinone rodenticide exposure
exposure to anticoagulant rodenticide ECTO:9002177 Environmental Conditions, Treatments and Exposures Ontology (ECTO) Relation: this environmental factor is this exposure This environmental factor is exposure to anticoagulant rodenticide (ECTO:9002177), qualified as has input chlorophacinone. ECTO:9002177 is an exposure from the Environmental Conditions, Treatments and Exposures Ontology.
Exposure to chlorophacinone-containing rodenticide bait, concentrate or powder. Human exposure is most often unintentional and paediatric, but the cases that produce severe coagulopathy are typically deliberate ingestions of concentrate by adults. Occupational exposure is also reported.
Show evidence (4 references)
PMID:32645465 SUPPORT INDIRECT Model Organism
"Chlorophacinone was detected in milk on day 2 post-exposure and remained quantifiable for at least 7 days in milk of these 11 ewes."
Chlorophacinone transfers into the milk of exposed livestock, so a food-chain route to human exposure exists in principle. Marked indirect because the measurement is in sheep and the same paper concludes that dairy products after a one-week withdrawal pose low consumer risk; no human poisoning by this route is reported.
PMID:16499407 SUPPORT INDIRECT Human Clinical
"Most cases of anticoagulant rodenticide exposure involve young children and, as a consequence, the amounts ingested are almost invariably small."
Characterizes the dominant exposure population for anticoagulant rodenticides, of which chlorophacinone is one.
PMID:16499407 SUPPORT INDIRECT Human Clinical
"Occupational exposure has also been reported."
Records occupational exposure as an additional route for this class.
+ 1 more reference
Mechanism Target:
TRIGGERS Systemic Chlorophacinone Exposure — Ingestion of chlorophacinone bait or concentrate is the route by which the systemic chlorophacinone burden is established.
Show evidence (1 reference)
PMID:10216974 SUPPORT DIRECT Human Clinical
"A 33-year-old man was admitted 8 hours after voluntary ingestion of 1875 mg of chlorophacinone (C'Operat 750 mL)."
Ties ingestion of a named chlorophacinone product to the resulting systemic exposure in a human case.
🔬

Biochemical Markers

2
Plasma chlorophacinone concentration (PRESENT)
Show evidence (3 references)
PMID:10216974 SUPPORT DIRECT Human Clinical
"Comprehensive testing for abused and therapeutic drugs in blood confirmed chlorophacinone (maximum plasma level: 27.6 mg/L), an antivitamin K (AVK) rodenticide."
Reports a measured maximum plasma chlorophacinone concentration in a human poisoning.
PMID:2769823 SUPPORT DIRECT Human Clinical
"Plasma chlorophacinone determinations were performed in three cases of intoxication."
Establishes plasma chlorophacinone measurement as the analytical basis for confirming and following this poisoning.
PMID:1522713 SUPPORT DIRECT Human Clinical
"Application of this method to 20 intoxicated patients indicated that the risk of bleeding syndrome, which is always associated with this kind of intoxication, is no longer present when chlorophacinone levels drop to below 1 microgram/mL."
The largest chlorophacinone-specific human series available here, twenty poisoned patients, and the only source proposing a serum concentration below which bleeding risk has resolved.
International normalized ratio (PRESENT)
Show evidence (2 references)
PMID:16499407 SUPPORT INDIRECT Other
"In all other cases, the INR should be measured 36-48 hours post exposure."
States the recommended timing for INR measurement after anticoagulant rodenticide exposure, which is set by the delay before the coagulopathy declares itself.
PMID:40974629 SUPPORT INDIRECT Human Clinical
"Coagulation function tests revealed average values of aPTT, PT, and INR of aPTT: 110 (3.71 ∼ 212) s, PT: 100 (11.6 ∼ 300) s and INR: 9 (0.98 ∼ 38.2), respectively, all significantly exceeding normal ranges."
Gives the observed INR range across 88 pooled anticoagulant rodenticide poisonings. Marked indirect because the series does not stratify by agent.
🔬

Diagnosis

3
Delayed coagulation testing after exposure
The coagulopathy is not present at the moment of exposure. Prothrombin time and INR should be measured 36 to 48 hours after exposure, because an earlier normal result does not exclude poisoning. In a case series the median latency to presentation was four days.
In young children with the small unintentional ingestions that dominate reported exposures, routine INR measurement is considered unnecessary.
Show evidence (7 references)
PMID:16499407 SUPPORT INDIRECT Other
"There are now sufficient data in young children exposed to anticoagulant rodenticides to conclude that routine measurement of the international normalised ratio (INR) is unnecessary."
States that the small unintentional paediatric ingestions which dominate reported exposures do not need routine coagulation testing, the counterweight to the 36 to 48 hour rule above. Marked indirect because it is a recommendation for the class rather than a chlorophacinone finding.
PMID:17357377 SUPPORT INDIRECT Other
"Patients with unintentional ingestion of less than 1 mg of LAAR active ingredient can be safely observed at home without laboratory monitoring."
The consensus out-of-hospital guideline puts a dose threshold on that recommendation. Marked indirect because the guideline covers long-acting anticoagulant rodenticides collectively.
PMID:17357377 SUPPORT INDIRECT Other
"Patients with unintentional ingestion of 1 mg or more of active ingredient and are asymptomatic should be evaluated for coagulopathy at 48-72 hours after exposure (Grade B)."
Gives the graded recommendation and testing window above that threshold. Marked indirect for the same class-level reason.
+ 4 more references
Suspicion on unexplained prothrombin time prolongation
Where no exposure is reported, the poisoning is found by suspecting it. An unexplained prolonged prothrombin time is the trigger to send a rodenticide assay.
Show evidence (1 reference)
PMID:31857739 SUPPORT INDIRECT Other
"Superwarfarin poisoning should therefore be suspected in all patients with unexplained prolongation of prothrombin time, and can be confirmed by their detection in serum."
States the diagnostic posture for this class of poisoning when the history is absent. Marked indirect because the review addresses the long-acting rodenticides collectively.
Analytical confirmation of chlorophacinone
Chlorophacinone is identified and quantified in plasma or serum by HPLC or LC-MS/MS. Analytical confirmation is what distinguishes chlorophacinone poisoning from the other anticoagulant rodenticides and from warfarin, since the coagulation profile alone cannot.
Show evidence (2 references)
PMID:10216974 SUPPORT DIRECT Human Clinical
"A simple HPLC procedure for the determination of chlorophacinone in human plasma is reported for that purpose."
Describes the analytical method by which chlorophacinone is confirmed in human plasma.
PMID:39893780 SUPPORT INDIRECT Other
"The method was validated according to the FDA recommendations for all compounds, with an eight-min run time in human whole blood, the gold standard in toxicological forensic investigation."
Reports the validation result for a panel whose eighteen analytes include chlorophacinone, which is what allows the specific agent to be named rather than inferred. Marked indirect because performance is reported for all compounds together rather than for chlorophacinone alone.
📈

Progression

3
Latent
Duration: 0 to 24 hours after exposure
Coagulation is still normal. Non-specific symptoms such as nausea may occur. A normal coagulation panel drawn in this window excludes nothing.
Show evidence (1 reference)
PMID:10216974 SUPPORT DIRECT Human Clinical
"The examination revealed excitation and nausea, with a normal prothrombin index (PI)."
Eight hours after ingesting 1875 mg of chlorophacinone the prothrombin index was still normal, which fixes the latent phase.
Coagulopathy onset
Duration: about 1 to 4 days after exposure
Prothrombin time and INR rise as factor VII, the shortest-lived of the affected factors, is depleted. Bleeding may begin. The reported median latency to clinical presentation is four days.
Show evidence (1 reference)
PMID:40974629 SUPPORT INDIRECT Human Clinical
"The median latency period was 4 days (range: 1 ∼ 30)."
Gives the interval from exposure to presentation. Marked indirect because the series pools anticoagulant rodenticides.
Resolution with rebound
Duration: weeks to months
Under vitamin K1 the coagulation profile corrects and relapses on each withdrawal. Full normalization took seven weeks in the reported case. Relapse here is the expected course, not a complication.
Show evidence (1 reference)
PMID:3222685 SUPPORT DIRECT Human Clinical
"Prothrombin time (and vitamin K dependent factors VII and X) finally normalized only 7 weeks after chlorophacinone ingestion."
Fixes the duration of the resolution phase in a chlorophacinone poisoning.
🌍

Epidemiology

3
Registered field use in France
Chlorophacinone's share of human poisoning is small and country-dependent, because it tracks the compound's registration. In France it is one of only two anticoagulants registered for field use, so it appears there far more than in series from countries where the second-generation compounds dominate.
Show evidence (1 reference)
PMID:21171851 SUPPORT INDIRECT Human Clinical
"In wildlife, bromadiolone and chlorophacinone are by far the most important products, being the only ones registered for field use."
States chlorophacinone's registration position in France, which is why the human case literature clusters there.
Exposure circumstances and severity
Reported anticoagulant rodenticide exposures are dominated by young children and are mostly accidental and clinically trivial. The severe cases come from deliberate adult ingestion.
Show evidence (2 references)
PMID:21171851 SUPPORT INDIRECT Human Clinical
"Overall, the proportion of anticoagulant exposure reported to the Lyon poison control center appeared very limited and mostly occurred in young children, with no or very limited clinical severity."
Characterizes the exposure population and its severity in the French poison-centre data. Marked indirect because the figures cover anticoagulant rodenticides collectively.
PMID:21171851 SUPPORT INDIRECT Human Clinical
"There is no report of mortality in the human data, and less than 1% of all exposure cases in domestic animals were fatal."
Records the absence of deaths in four years of French human data, which is the counterweight to the severity of the published case reports. Marked indirect because agents are pooled.
Reported burden in the United States
United States poison-centre data for the long-acting anticoagulant rodenticides as a class give the order of magnitude of reported exposure. No chlorophacinone-specific incidence or prevalence figure exists.
These are reported exposures, not diagnosed cases of poisoning, and they cannot be separated by agent.
Show evidence (2 references)
PMID:26239439 SUPPORT INDIRECT Human Clinical
"In the United States, on average, there were 10413 exposures reported with 2750 patients treated annually."
Gives annual reported exposures and treated patients. Marked indirect because the figure covers the long-acting class, not chlorophacinone.
PMID:26239439 SUPPORT INDIRECT Human Clinical
"Fortunately, only 2% of all exposures result in morbidity or mortality."
Quantifies the proportion of reported exposures that matter clinically. Marked indirect for the same class-level reason.
🔀

Differential Diagnoses

5

Conditions with similar clinical presentations that must be differentiated from Chlorophacinone Poisoning:

Overlapping Features Biallelic germline variants in VKORC1 or GGCX produce the same combined deficiency of the vitamin K-dependent factors by disabling the same two steps that chlorophacinone blocks pharmacologically.
Distinguishing Features
  • Germline VKORC1 or GGCX variants are present and the presentation is lifelong rather than following a single exposure.
  • No anticoagulant rodenticide is detectable on toxicological analysis.
  • Skeletal and other extra-haemostatic features of GGCX deficiency have no counterpart in an acute poisoning.
Warfarin or other coumarin anticoagulant
Overlapping Features Therapeutic warfarin, warfarin overdose, and the other coumarin oral anticoagulants produce the same vitamin K antagonist coagulopathy through the same enzyme.
Distinguishing Features
  • A drug history and a therapeutic indication are usually present.
  • Warfarin coagulopathy resolves within days of stopping the drug and responds to ordinary reversal doses of vitamin K, not to months of high-dose therapy.
  • Analytical confirmation separates the compounds.
Show evidence (1 reference)
PMID:26239439 SUPPORT INDIRECT Other
"Long-acting anticoagulant rodenticides have an extremely high affinity for VKOR compared with warfarin, characterized by rebound coagulopathy and bleeding after initial treatment and the need for high-dose, long-term therapy with vitamin K1."
Contrasts the rodenticide course with warfarin's, which is the distinguishing feature. Marked indirect because the review speaks for the long-acting class.
Liver failure
Overlapping Features Hepatic synthetic failure also depresses the vitamin K-dependent factors and prolongs the prothrombin time.
Distinguishing Features
  • Factor V is synthesized in the liver but is not vitamin K dependent, so it is reduced in liver failure and unaffected by a vitamin K antagonist. This factor V versus factor VII pattern is the standard discriminator; no source cited in this entry reports it, so it is recorded as clinical convention rather than curated as evidenced content.
  • Other markers of hepatic failure, such as bilirubin, albumin and transaminases, are deranged.
  • The coagulopathy of liver failure does not correct on high-dose vitamin K1 and does not rebound on its withdrawal.
Disseminated intravascular coagulation
Overlapping Features Consumptive coagulopathy also prolongs the prothrombin time and causes multi-site bleeding.
Distinguishing Features
  • Platelet count and fibrinogen are low and D-dimer is raised in disseminated intravascular coagulation; a vitamin K antagonist leaves the platelet count and fibrinogen untouched.
  • A precipitating illness such as sepsis, malignancy or obstetric catastrophe is present.
  • Recorded as clinical convention. No source cited in this entry reports these discriminating values.
Other anticoagulant rodenticide poisoning
Overlapping Features Brodifacoum, bromadiolone, difenacoum, difethialone, flocoumafen and coumatetralyl produce a clinically indistinguishable coagulopathy through the same target. In pooled case series brodifacoum and bromadiolone are the agents most often identified.
Distinguishing Features
  • Only analytical confirmation separates the agents; the coagulation profile does not.
  • The second-generation compounds persist far longer, so treatment courses run months rather than weeks.
Show evidence (1 reference)
PMID:40974629 SUPPORT INDIRECT Human Clinical
"About the types of rodenticides, a total of 38 cases reported 7 distinct types, with brodifacoum and bromadiolone being the most common"
Establishes that several agents in this class present the same way and that the commonest identified are not chlorophacinone. Marked indirect because the sentence is about agent distribution rather than about distinguishing them clinically.
🐁

Animal Models

2
Accidental chlorophacinone poisoning in calves
Fourteen crossbred calves ingested chlorophacinone powder present in their housing. Three were submitted for necropsy, with chlorophacinone confirmed in liver at 2.9 to 4.2 ppm. This is a naturally occurring, dose-uncontrolled veterinary poisoning rather than a designed experimental model, and it is recorded here because it couples a confirmed chlorophacinone tissue burden to a documented anatomical distribution of haemorrhage.
Species
Cattle
Genotype
wild type
Publication
Show evidence (1 reference)
PMID:35000500 SUPPORT DIRECT Model Organism
"Three calves were submitted to the Iowa State University Veterinary Diagnostic Laboratory for diagnostic evaluation following an abrupt increase in morbidity and mortality in a calf herd associated with epistaxis and widespread hemorrhage."
Establishes the exposure event and the animals examined, which is what this entry records as a naturally occurring chlorophacinone poisoning.
Accidental chlorophacinone poisoning in lambs
Eleven lambs reached old bait placed between the wall studs of their housing through a hole in the plywood. Two were necropsied, with chlorophacinone confirmed in liver at 0.58 and 0.50 ppm. A second species with a confirmed chlorophacinone tissue burden, and the source of the tempo: these animals died within one to two hours of the first sign.
Species
Sheep
Genotype
wild type
Publication
Show evidence (1 reference)
PMID:17037620 SUPPORT DIRECT Model Organism
"The anticoagulant chlorophacinone was detected in the livers at 0.58 ppm and 0.50 ppm (wet weight), respectively."
Confirms chlorophacinone analytically in the affected animals, which is what makes this exposure informative rather than presumptive.
{ }

Source YAML

click to show
name: Chlorophacinone Poisoning
creation_date: "2026-09-03T00:00:00Z"
category: Environmental
categories:
- Toxic Exposure Disorder
- Rodenticide Poisoning
- Acquired Coagulopathy
synonyms:
- chlorophacinone intoxication
- indanedione anticoagulant rodenticide poisoning
description: >-
  Chlorophacinone poisoning is an acquired, vitamin K-antagonist coagulopathy
  caused by ingestion of, or other exposure to, the indanedione anticoagulant
  rodenticide chlorophacinone. Chlorophacinone inhibits vitamin K 2,3-epoxide
  reductase, so the reduced vitamin K needed as cofactor for hepatic
  gamma-carboxylation is not regenerated and the vitamin K-dependent
  coagulation factors II, VII, IX and X are secreted in an
  under-carboxylated, functionally inactive form. The resulting coagulopathy
  presents after a latent interval with mucocutaneous and internal bleeding
  and, because chlorophacinone accumulates in liver and is eliminated slowly,
  it can persist for weeks to months and rebound whenever vitamin K
  replacement is withdrawn.
notes: >-
  MONDO has no term for chlorophacinone poisoning, for indanedione or
  anticoagulant rodenticide poisoning, or for rodenticide poisoning generally.
  The entry therefore carries no primary disease_term; the only mapping
  recorded is a broad cross-reference to MONDO:0029000 (poisoning), which
  deliberately does not retire the concept from the MONDO curation queue. A
  request for a specific MONDO term is the right follow-up. PIVKA-II is the
  mechanistically specific marker of vitamin K antagonism and is not curated
  as a phenotype here, because no source cited in this entry reports PIVKA-II
  measurement in chlorophacinone poisoning. No datasets are curated: no
  transcriptomic, proteomic, metabolomic or perturbation dataset for
  chlorophacinone exposure was found, only residue chemistry in wildlife and
  livestock tissue, which measures the compound rather than any host response.
mappings:
  mondo_mappings:
  - term:
      id: MONDO:0029000
      label: poisoning
    mapping_predicate: skos:broadMatch
    mapping_source: dismech
    mapping_justification: >-
      MONDO has no chlorophacinone-, indanedione-, or rodenticide-specific
      poisoning term. MONDO:0029000 is the nearest ancestor concept and is
      recorded as a broad cross-reference only.
classifications:
  harrisons_chapter:
  - classification_value: POISONING_ENVENOMATION
    evidence:
    - reference: PMID:16499407
      reference_title: "Anticoagulant rodenticides."
      supports: SUPPORT
      directness: DIRECT
      evidence_source: OTHER
      snippet: "This group includes the second generation 4-hydroxycoumarins brodifacoum, bromadiolone, difenacoum, flocoumafen and the indanedione derivatives chlorophacinone and diphacinone."
      explanation: >-
        Places chlorophacinone within the anticoagulant rodenticides, a
        pesticide poisoning entity handled in the poisoning and overdose
        chapter rather than in a haematology chapter.
pathophysiology:
- name: Systemic Chlorophacinone Exposure
  biological_scale: ORGANISM
  description: >-
    Chlorophacinone enters the body by ingestion of bait or concentrate.
    Inhalational and transcutaneous routes are documented for the
    anticoagulant rodenticides as a class; the cited source does not attribute
    either specifically to chlorophacinone. Ingested doses reported in human
    cases span roughly 100 mg to nearly 2 g, and plasma concentrations after a
    large deliberate ingestion reach the tens of mg/L.
  chemical_entities:
  - preferred_term: chlorophacinone
    term:
      id: CHEBI:81796
      label: Chlorophacinone
  evidence:
  - reference: PMID:10216974
    reference_title: "Toxicological management of chlorophacinone poisoning."
    supports: SUPPORT
    directness: DIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "Comprehensive testing for abused and therapeutic drugs in blood confirmed chlorophacinone (maximum plasma level: 27.6 mg/L), an antivitamin K (AVK) rodenticide."
    explanation: >-
      Documents measured systemic chlorophacinone exposure in a human
      poisoning and identifies the compound as a vitamin K antagonist.
  - reference: PMID:10216974
    reference_title: "Toxicological management of chlorophacinone poisoning."
    supports: SUPPORT
    directness: DIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "A 33-year-old man was admitted 8 hours after voluntary ingestion of 1875 mg of chlorophacinone (C'Operat 750 mL)."
    explanation: >-
      Gives the ingested dose in a deliberate human chlorophacinone poisoning.
  - reference: PMID:26239439
    reference_title: "Long-Acting Anticoagulant Rodenticide (Superwarfarin) Poisoning: A Review of Its Historical Development, Epidemiology, and Clinical Management."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "Inhalational, transcutaneous, and oral routes of exposure have been documented."
    explanation: >-
      Establishes the routes of exposure for the long-acting anticoagulant
      rodenticide class. Marked indirect because the review reports routes for
      the class as a whole and does not attribute each route to
      chlorophacinone specifically.
  downstream:
  - target: Vitamin K Epoxide Reductase Inhibition
    causal_link_type: DIRECT
    description: >-
      Absorbed chlorophacinone reaches the hepatocyte endoplasmic reticulum
      and binds the vitamin K epoxide reductase complex.
    evidence:
    - reference: PMID:16499407
      reference_title: "Anticoagulant rodenticides."
      supports: SUPPORT
      directness: INDIRECT
      evidence_source: OTHER
      snippet: "Anticoagulant rodenticides inhibit vitamin K(1)-2,3 epoxide reductase and thus the synthesis of vitamin K and subsequently clotting factors II, VII, IX and X."
      explanation: >-
        States the pharmacological target of the anticoagulant rodenticides,
        the class to which the same review assigns chlorophacinone. Tagged
        OTHER because the sentence is a pharmacological assertion in a
        narrative review rather than a reported study result.
  - target: Hepatic Accumulation and Prolonged Elimination
    causal_link_type: DIRECT
    description: >-
      The absorbed compound partitions into liver, where it is retained far
      longer than plasma concentrations alone would suggest.
    evidence:
    - reference: PMID:2769823
      reference_title: "Chlorophacinone intoxication. A biological and toxicological study."
      supports: SUPPORT
      directness: DIRECT
      evidence_source: HUMAN_CLINICAL
      snippet: "The determination of half-lives was investigated and the results indicate that the greater the quantity absorbed, the longer the half-life."
      explanation: >-
        Links the absorbed chlorophacinone burden to the duration of its own
        elimination in human poisoning cases.
- name: Vitamin K Epoxide Reductase Inhibition
  biological_scale: MOLECULAR
  description: >-
    Chlorophacinone inhibits the vitamin K 2,3-epoxide reductase complex
    (VKORC1) in the hepatocyte endoplasmic reticulum. VKORC1 normally reduces
    vitamin K 2,3-epoxide back to vitamin K hydroquinone; blocking it halts
    the vitamin K cycle at the epoxide step.
  cell_types:
  - preferred_term: hepatocyte
    term:
      id: CL:0000182
      label: hepatocyte
  molecular_functions:
  - preferred_term: vitamin K epoxide reductase activity
    modifier: DECREASED
    term:
      id: GO:0047057
      label: vitamin-K-epoxide reductase (warfarin-sensitive) activity
  genes:
  - preferred_term: VKORC1
    term:
      id: hgnc:23663
      label: VKORC1
  evidence:
  - reference: PMID:26239439
    reference_title: "Long-Acting Anticoagulant Rodenticide (Superwarfarin) Poisoning: A Review of Its Historical Development, Epidemiology, and Clinical Management."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: OTHER
    snippet: "Long-acting anticoagulant rodenticides (LAARs) inhibit vitamin K epoxide reductase (VKOR)."
    explanation: >-
      Names VKOR as the molecular target for the long-acting anticoagulant
      rodenticides. Marked indirect because the sentence is class-level and does not
      name chlorophacinone.
  - reference: PMID:35970209
    reference_title: "VKORC1 single nucleotide polymorphisms in rodents in Spain."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: COMPUTATIONAL
    snippet: "Computational analysis of binding predictions found out that the brown rat S149I mutation predicted a high reduction of the binding affinity of chlorophacinone and brodifacoum ARs"
    explanation: >-
      Chlorophacinone is modelled as a VKORC1 ligand whose binding is
      abolished by a VKORC1 active-site substitution, which is evidence that
      VKORC1 is its target. Marked indirect because the binding is predicted
      computationally, in rat VKORC1 rather than human.
  - reference: PMID:31857739
    reference_title: "Superwarfarin (Long-Acting Anticoagulant Rodenticides) Poisoning: from Pathophysiology to Laboratory-Guided Clinical Management."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: OTHER
    snippet: "The mechanism of action is by inhibition of vitamin K epoxide reductase, resulting in the inability of the body to recycle vitamin K."
    explanation: >-
      States epoxide reductase inhibition and the resulting failure to recycle
      vitamin K. Marked indirect because the review covers the long-acting
      rodenticides as a class. Note also that the review frames the class as
      warfarin derivatives, which chlorophacinone is not: it is an indanedione,
      so the review's structural reasoning about bulky aromatic sidechains does
      not carry over even though the enzyme target does.
  - reference: PMID:24781908
    reference_title: "[Rodenticide resistance and consequences]."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: MODEL_ORGANISM
    snippet: "Polymorphisms in the vitamin K epoxide reductase complex subunit 1 (VKORC1) gene and respective substitutions of amino acids in the VKOR enzyme are the major cause for rodenticide resistance."
    explanation: >-
      Rodenticide resistance maps to VKORC1 coding changes, which is genetic
      corroboration that VKORC1 is the drug target. Marked indirect on two
      steps: the quoted sentence says "rodenticide" rather than naming
      chlorophacinone, and it concerns rodent resistance genetics rather than
      human poisoning.
  downstream:
  - target: Depletion of the Reduced Vitamin K Pool
    causal_link_type: DIRECT
    description: >-
      With the epoxide reductase blocked, vitamin K 2,3-epoxide accumulates
      and the hydroquinone pool available as carboxylase cofactor falls.
    evidence:
    - reference: PMID:16499407
      reference_title: "Anticoagulant rodenticides."
      supports: SUPPORT
      directness: INDIRECT
      evidence_source: OTHER
      snippet: "Anticoagulant rodenticides inhibit vitamin K(1)-2,3 epoxide reductase and thus the synthesis of vitamin K and subsequently clotting factors II, VII, IX and X."
      explanation: >-
        States that epoxide reductase inhibition curtails vitamin K supply,
        which is this edge.
- name: Depletion of the Reduced Vitamin K Pool
  biological_scale: MOLECULAR
  description: >-
    The hepatic pool of reduced vitamin K (hydroquinone) is depleted because
    the epoxide formed at each carboxylation cycle cannot be recycled. Dietary
    vitamin K intake alone does not replace it at the rate the cycle consumes
    it, which is why exogenous vitamin K1 in gram-scale cumulative doses is
    the antidote.
  biological_processes:
  - preferred_term: vitamin K metabolic process
    modifier: DECREASED
    term:
      id: GO:0042373
      label: vitamin K metabolic process
  chemical_entities:
  - preferred_term: phylloquinone
    term:
      id: CHEBI:18067
      label: phylloquinone
  evidence:
  - reference: PMID:3222685
    reference_title: "[Prolonged anticoagulation following chlorophacinone poisoning]."
    supports: SUPPORT
    directness: DIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "Under high dose vitamin K therapy the Quick was rapidly corrected but fell again on each vitamin K withdrawal."
    explanation: >-
      Correction on exogenous vitamin K and relapse on its withdrawal is the
      clinical signature of a depleted, pharmacologically unreplenishable
      reduced vitamin K pool in a chlorophacinone-poisoned patient.
  downstream:
  - target: Impaired Gamma-Carboxylation of Vitamin K-Dependent Clotting Factors
    causal_link_type: DIRECT
    description: >-
      Gamma-glutamyl carboxylase requires vitamin K hydroquinone as cofactor,
      so the depleted pool limits carboxylation directly.
    evidence:
    - reference: PMID:16499407
      reference_title: "Anticoagulant rodenticides."
      supports: SUPPORT
      directness: INDIRECT
      evidence_source: OTHER
      snippet: "Anticoagulant rodenticides inhibit vitamin K(1)-2,3 epoxide reductase and thus the synthesis of vitamin K and subsequently clotting factors II, VII, IX and X."
      explanation: >-
        The review couples loss of vitamin K to loss of the four factors.
        Marked indirect because the abstract states the consequence for the
        factors without naming gamma-carboxylation as the intervening step.
- name: Impaired Gamma-Carboxylation of Vitamin K-Dependent Clotting Factors
  biological_scale: CELLULAR
  description: >-
    Hepatic gamma-glutamyl carboxylase can no longer convert glutamate
    residues in the Gla domains of the vitamin K-dependent proteins to
    gamma-carboxyglutamate. The affected proteins are prothrombin (factor II)
    and factors VII, IX and X, together with the anticoagulant proteins C and
    S. Under-carboxylated Gla domains cannot chelate calcium and so cannot
    dock the factor onto anionic phospholipid membranes.
  cell_types:
  - preferred_term: hepatocyte
    term:
      id: CL:0000182
      label: hepatocyte
  biological_processes:
  - preferred_term: peptidyl-glutamic acid carboxylation
    modifier: DECREASED
    term:
      id: GO:0017187
      label: peptidyl-glutamic acid carboxylation
  genes:
  - preferred_term: GGCX
    term:
      id: hgnc:4247
      label: GGCX
  - preferred_term: F2
    term:
      id: hgnc:3535
      label: F2
  - preferred_term: F7
    term:
      id: hgnc:3544
      label: F7
  - preferred_term: F9
    term:
      id: hgnc:3551
      label: F9
  - preferred_term: F10
    term:
      id: hgnc:3528
      label: F10
  - preferred_term: PROC
    term:
      id: hgnc:9451
      label: PROC
  - preferred_term: PROS1
    term:
      id: hgnc:9456
      label: PROS1
  notes: >-
    Proteins C and S are listed as substrates of the same carboxylase and are
    lost alongside the procoagulant factors. Their loss is the accepted
    explanation offered for the paradoxical thrombotic events reported in this
    class of poisoning, but no cited reference here demonstrates that
    mechanism, so it is recorded as a hypothesis in `discussions` rather than
    as a curated causal edge.
  evidence:
  - reference: PMID:16499407
    reference_title: "Anticoagulant rodenticides."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: OTHER
    snippet: "Anticoagulant rodenticides inhibit vitamin K(1)-2,3 epoxide reductase and thus the synthesis of vitamin K and subsequently clotting factors II, VII, IX and X."
    explanation: >-
      Identifies factors II, VII, IX and X as the affected proteins. Marked indirect
      because the abstract does not itself use the term gamma-carboxylation.
  downstream:
  - target: Functional Deficiency of Coagulation Factors II, VII, IX and X
    causal_link_type: DIRECT
    description: >-
      Under-carboxylated factors are secreted but cannot assemble on
      membranes, so measured factor activity falls.
    evidence:
    - reference: PMID:3222685
      reference_title: "[Prolonged anticoagulation following chlorophacinone poisoning]."
      supports: SUPPORT
      directness: DIRECT
      evidence_source: HUMAN_CLINICAL
      snippet: "Prothrombin time (and vitamin K dependent factors VII and X) finally normalized only 7 weeks after chlorophacinone ingestion."
      explanation: >-
        Directly measures loss of vitamin K-dependent factor activity, and its
        recovery, in a chlorophacinone-poisoned patient.
- name: Functional Deficiency of Coagulation Factors II, VII, IX and X
  biological_scale: MOLECULAR
  description: >-
    Circulating activity of prothrombin and factors VII, IX and X falls.
    Because factor VII has the shortest half-life of the four, the prothrombin
    time and INR move first; the activated partial thromboplastin time follows
    as factors IX, X and II decline.
  notes: >-
    The order in which the four factors fall, and the resulting fact that the
    prothrombin time moves before the activated partial thromboplastin time,
    follows from their differing plasma half-lives. That is standard
    coagulation physiology and is not demonstrated in any source cited in this
    entry, which report the depressed factor activities without measuring the
    sequence. The ordering is stated because it explains the delayed onset and
    the assay pattern, not because a cited paper establishes it.
  genes:
  - preferred_term: F2
    term:
      id: hgnc:3535
      label: F2
  - preferred_term: F7
    term:
      id: hgnc:3544
      label: F7
  - preferred_term: F9
    term:
      id: hgnc:3551
      label: F9
  - preferred_term: F10
    term:
      id: hgnc:3528
      label: F10
  evidence:
  - reference: PMID:3222685
    reference_title: "[Prolonged anticoagulation following chlorophacinone poisoning]."
    supports: SUPPORT
    directness: DIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "Prothrombin time (and vitamin K dependent factors VII and X) finally normalized only 7 weeks after chlorophacinone ingestion."
    explanation: >-
      Reports factor VII and factor X activity as the quantities that were
      depressed and later normalized after chlorophacinone ingestion.
  - reference: PMID:16499407
    reference_title: "Anticoagulant rodenticides."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: OTHER
    snippet: "If active bleeding occurs, prothrombin complex concentrate (which contains factors II, VII, IX and X) 50 units/kg, or recombinant activated factor VII 1.2-4.8 mg or fresh frozen plasma 15 mL/kg (if no concentrate is available) and phytomenadione 10mg intravenously (100 microg/kg bodyweight for a child) should be given."
    explanation: >-
      Replacing exactly factors II, VII, IX and X is the recommended
      haemostatic response, which corroborates that those four are the
      deficient proteins. Marked indirect because this is a therapeutic
      recommendation, not a direct measurement of factor levels.
  downstream:
  - target: Prolonged Coagulopathy
    causal_link_type: DIRECT
    description: >-
      Loss of the four factors disables both the extrinsic and the common
      coagulation pathway, giving a global clotting defect.
    evidence:
    - reference: PMID:40974629
      reference_title: "A retrospective analysis of 88 anticoagulant rodenticide poisoning cases: Characteristics and forensic implications."
      supports: SUPPORT
      directness: INDIRECT
      evidence_source: HUMAN_CLINICAL
      snippet: "Coagulation function tests revealed average values of aPTT, PT, and INR of aPTT: 110 (3.71 ∼ 212) s, PT: 100 (11.6 ∼ 300) s and INR: 9 (0.98 ∼ 38.2), respectively, all significantly exceeding normal ranges."
      explanation: >-
        Both PT and aPTT are grossly prolonged, which is the expected pattern
        when the shared factors of the extrinsic and common pathways are lost.
        Marked indirect because the case series covers anticoagulant
        rodenticides collectively and reports no chlorophacinone stratum.
- name: Hepatic Accumulation and Prolonged Elimination
  biological_scale: ORGANISM
  description: >-
    Chlorophacinone is lipid-soluble, accumulates in liver and undergoes
    enterohepatic recirculation, so its biological half-life is long and grows
    longer with larger ingested doses. This is the property that separates the
    long-acting rodenticides from warfarin clinically, and it is what makes
    the coagulopathy last weeks rather than days. Chlorophacinone is
    nevertheless shorter-acting than the second-generation compounds: the
    class treatment durations reported in reviews are driven by brodifacoum
    and should not be read as a chlorophacinone expectation.
  notes: >-
    Because enterohepatic recirculation is part of what sustains this node,
    interrupting it is a plausible therapeutic target. A bile sequestrant,
    cholestyramine, cut mortality from 67 per cent to 11 per cent in a rabbit
    model of brodifacoum poisoning (PMID:29897553). That is a different
    compound in a different species, and no chlorophacinone data exist, so no
    treatment is curated from it. Recorded because the node names the mechanism
    the intervention would act on.
  chemical_entities:
  - preferred_term: chlorophacinone
    term:
      id: CHEBI:81796
      label: Chlorophacinone
  evidence:
  - reference: PMID:16499407
    reference_title: "Anticoagulant rodenticides."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: OTHER
    snippet: "The greater potency and duration of action of long-acting anticoagulant rodenticides is attributed to their: (i) greater affinity for vitamin K(1)-2,3-epoxide reductase; (ii) ability to disrupt the vitamin K(1)-epoxide cycle at more than one point; (iii) hepatic accumulation; and (iv) unusually long biological half-lives due to high lipid solubility and enterohepatic circulation."
    explanation: >-
      Names hepatic accumulation, lipid solubility and enterohepatic
      circulation as the basis for the prolonged action of the long-acting
      group, to which the same review assigns chlorophacinone. Marked indirect
      because the sentence is about the class. Only clauses (iii) and (iv),
      hepatic accumulation and long biological half-life, are curated on this
      node. Clauses (i) and (ii), greater VKOR affinity and disruption of the
      cycle at more than one point, are deliberately not carried over: this
      entry also records that rodent-efficacy sources call chlorophacinone
      first-generation, which is a statement about lower potency, so a
      class-level affinity claim cannot be asserted for it here.
  - reference: PMID:2769823
    reference_title: "Chlorophacinone intoxication. A biological and toxicological study."
    supports: SUPPORT
    directness: DIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "The determination of half-lives was investigated and the results indicate that the greater the quantity absorbed, the longer the half-life."
    explanation: >-
      Measures chlorophacinone half-life in three human poisonings and shows
      it lengthens with dose, the kinetic behaviour of a saturable
      accumulating compartment.
  - reference: PMID:10216974
    reference_title: "Toxicological management of chlorophacinone poisoning."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "Chlorophacinone accumulation in target cells or existence of an unidentified metabolite may explain persistence of the hypocoagulability syndrome at low plasmatic concentrations of chlorophacinone."
    explanation: >-
      Observes that the coagulopathy outlasts measurable plasma
      chlorophacinone. Marked indirect because the authors offer tissue accumulation
      as one of two candidate explanations rather than demonstrating it.
  downstream:
  - target: Prolonged Coagulopathy
    causal_link_type: DIRECT
    description: >-
      Because drug persists in liver after plasma levels fall, inhibition of
      the vitamin K cycle continues and the coagulopathy rebounds whenever
      vitamin K replacement stops.
    evidence:
    - reference: PMID:26239439
      reference_title: "Long-Acting Anticoagulant Rodenticide (Superwarfarin) Poisoning: A Review of Its Historical Development, Epidemiology, and Clinical Management."
      supports: SUPPORT
      directness: INDIRECT
      evidence_source: OTHER
      snippet: "Long-acting anticoagulant rodenticides have an extremely high affinity for VKOR compared with warfarin, characterized by rebound coagulopathy and bleeding after initial treatment and the need for high-dose, long-term therapy with vitamin K1."
      explanation: >-
        Links the persistent drug-target interaction to rebound coagulopathy
        and to the need for prolonged vitamin K1. Marked indirect because the
        review speaks for the class and does not report a chlorophacinone
        stratum.
- name: Prolonged Coagulopathy
  biological_scale: ORGANISM
  description: >-
    The clotting defect is global, severe and long-lived. Prothrombin time,
    INR and activated partial thromboplastin time are grossly prolonged, often
    beyond the measurable range of the assay, and normalization can take weeks
    to months after a single large ingestion.
  biological_processes:
  - preferred_term: blood coagulation
    modifier: DECREASED
    term:
      id: GO:0007596
      label: blood coagulation
  - preferred_term: hemostasis
    modifier: DECREASED
    term:
      id: GO:0007599
      label: hemostasis
  evidence:
  - reference: PMID:2769823
    reference_title: "Chlorophacinone intoxication. A biological and toxicological study."
    supports: SUPPORT
    directness: DIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "The data collected in this study confirm the particularly prolonged anticoagulant effect of this compound and show that the knowledge of plasma concentrations may be very useful for clinicians"
    explanation: >-
      Confirms the prolonged anticoagulant effect from serial measurements in
      three human chlorophacinone intoxications.
  - reference: PMID:3222685
    reference_title: "[Prolonged anticoagulation following chlorophacinone poisoning]."
    supports: SUPPORT
    directness: DIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "Her Quick time at admission was less than 10% (Prothrombin time 79 sec., normal control 12 sec.)."
    explanation: >-
      Quantifies the severity of the coagulopathy at presentation in a
      chlorophacinone poisoning.
  downstream:
  - target: Multicompartment Hemorrhage
    causal_link_type: DIRECT
    description: >-
      With thrombin generation crippled, haemostatic plugs cannot be
      stabilized, so bleeding occurs at mucosal surfaces, into soft tissue and
      into any internal organ.
    evidence:
    - reference: PMID:16499407
      reference_title: "Anticoagulant rodenticides."
      supports: SUPPORT
      directness: INDIRECT
      evidence_source: HUMAN_CLINICAL
      snippet: "Substantial ingestion produces epistaxis, gingival bleeding, widespread bruising, haematomas, haematuria with flank pain, menorrhagia, gastrointestinal bleeding, rectal bleeding and haemorrhage into any internal organ; anaemia may result."
      explanation: >-
        Enumerates the bleeding manifestations that follow substantial
        anticoagulant rodenticide ingestion.
- name: Multicompartment Hemorrhage
  biological_scale: ORGANISM
  description: >-
    Bleeding is characteristically multifocal rather than confined to one
    site. Mucocutaneous bleeding predominates, with haematuria the single most
    frequently reported manifestation, and haemorrhage into serous cavities,
    muscle and the central nervous system also occurs.
  biological_processes:
  - preferred_term: hemostasis
    modifier: DECREASED
    term:
      id: GO:0007599
      label: hemostasis
  evidence:
  - reference: PMID:40974629
    reference_title: "A retrospective analysis of 88 anticoagulant rodenticide poisoning cases: Characteristics and forensic implications."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "Multi-organ hemorrhage was the predominant clinical manifestation, with hematuria being the most frequently reported symptom (n = 39)."
    explanation: >-
      Establishes multi-organ haemorrhage as the dominant presentation across
      88 human anticoagulant rodenticide poisonings, which is what this node
      claims. Marked indirect because the series pools rodenticides and does
      not report a chlorophacinone stratum.
  - reference: PMID:35000500
    reference_title: "Acute hemorrhage and death in calves following chlorophacinone exposure."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: MODEL_ORGANISM
    snippet: "Each of the submitted calves had moderate-to-severe hemorrhage within various tissues and body cavities, including the thymus, subcutaneous region of the neck, mediastinum, lungs, pericardial sac, heart, spleen, perirenal fat, urinary bladder, and skeletal muscle, including the diaphragm."
    explanation: >-
      A chlorophacinone-attributed, liver-residue-confirmed poisoning in which
      the anatomical distribution of the bleeding was documented at necropsy.
      Recorded as veterinary in vivo evidence supplementing, not replacing,
      the human case evidence for this node.
  downstream:
  - target: Hypovolemic Shock and Death
    causal_link_type: DIRECT
    description: >-
      Continued blood loss, or haemorrhage into a closed and unforgiving
      compartment such as the cranium, is what kills.
    evidence:
    - reference: PMID:16499407
      reference_title: "Anticoagulant rodenticides."
      supports: SUPPORT
      directness: INDIRECT
      evidence_source: HUMAN_CLINICAL
      snippet: "Severe blood loss may result in hypovolaemic shock, coma and death."
      explanation: >-
        States the fatal pathway from haemorrhage in anticoagulant rodenticide
        poisoning.
- name: Hypovolemic Shock and Death
  biological_scale: ORGANISM
  description: >-
    Death follows either exsanguinating blood loss with hypovolaemic shock or
    haemorrhage into the central nervous system. Intracranial haemorrhage is
    the most commonly reported cause of death in this class of poisoning.
  evidence:
  - reference: PMID:26239439
    reference_title: "Long-Acting Anticoagulant Rodenticide (Superwarfarin) Poisoning: A Review of Its Historical Development, Epidemiology, and Clinical Management."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "Deaths were most commonly associated with intracranial hemorrhage."
    explanation: >-
      Identifies the leading fatal event across 174 reviewed cases. Marked indirect
      because the review reports the class and does not stratify by agent.
  - reference: PMID:40974629
    reference_title: "A retrospective analysis of 88 anticoagulant rodenticide poisoning cases: Characteristics and forensic implications."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "Six fatalities occurred and autopsy findings in three cases primarily indicated multi-organ hemorrhage and necrosis."
    explanation: >-
      Reports fatalities and their autopsy correlate in a pooled anticoagulant
      rodenticide case series. Marked indirect for the same pooling reason.
phenotypes:
- category: Laboratory
  name: Prolonged Prothrombin Time
  description: >-
    Prothrombin time and INR are prolonged, usually first and most markedly,
    because factor VII has the shortest half-life of the affected factors.
    Values frequently exceed the measurable range of the assay.
  phenotype_term:
    preferred_term: Prolonged prothrombin time
    term:
      id: HP:0008151
      label: Prolonged prothrombin time
  diagnostic: true
  evidence:
  - reference: PMID:3222685
    reference_title: "[Prolonged anticoagulation following chlorophacinone poisoning]."
    supports: SUPPORT
    directness: DIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "Her Quick time at admission was less than 10% (Prothrombin time 79 sec., normal control 12 sec.)."
    explanation: >-
      A chlorophacinone-poisoned patient with a prothrombin time of 79 seconds
      against a 12-second control.
  - reference: PMID:26239439
    reference_title: "Long-Acting Anticoagulant Rodenticide (Superwarfarin) Poisoning: A Review of Its Historical Development, Epidemiology, and Clinical Management."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "Most patients present with coagulation assay values beyond measurable limits."
    explanation: >-
      Describes the typical magnitude of the derangement. Marked indirect because it
      is a class-level statement.
- category: Laboratory
  name: Prolonged Activated Partial Thromboplastin Time
  description: >-
    The activated partial thromboplastin time is also prolonged, reflecting
    loss of factors IX, X and II from the intrinsic and common pathways.
  phenotype_term:
    preferred_term: Prolonged partial thromboplastin time
    term:
      id: HP:0003645
      label: Prolonged partial thromboplastin time
  evidence:
  - reference: PMID:40974629
    reference_title: "A retrospective analysis of 88 anticoagulant rodenticide poisoning cases: Characteristics and forensic implications."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "Coagulation function tests revealed average values of aPTT, PT, and INR of aPTT: 110 (3.71 ∼ 212) s, PT: 100 (11.6 ∼ 300) s and INR: 9 (0.98 ∼ 38.2), respectively, all significantly exceeding normal ranges."
    explanation: >-
      Reports aPTT prolongation alongside PT and INR across 88 anticoagulant
      rodenticide poisonings. Marked indirect because the series pools agents.
- category: Laboratory
  name: Reduced Factor VII Activity
  phenotype_term:
    preferred_term: Reduced factor VII activity
    term:
      id: HP:0008169
      label: Reduced factor VII activity
  description: >-
    Factor VII activity falls earliest because its plasma half-life is the
    shortest of the vitamin K-dependent procoagulant factors.
  evidence:
  - reference: PMID:3222685
    reference_title: "[Prolonged anticoagulation following chlorophacinone poisoning]."
    supports: SUPPORT
    directness: DIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "Prothrombin time (and vitamin K dependent factors VII and X) finally normalized only 7 weeks after chlorophacinone ingestion."
    explanation: >-
      Factor VII activity was depressed and was tracked to normalization in a
      chlorophacinone poisoning.
- category: Laboratory
  name: Reduced Factor X Activity
  phenotype_term:
    preferred_term: Reduced factor X activity
    term:
      id: HP:0008321
      label: Reduced factor X activity
  evidence:
  - reference: PMID:3222685
    reference_title: "[Prolonged anticoagulation following chlorophacinone poisoning]."
    supports: SUPPORT
    directness: DIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "Prothrombin time (and vitamin K dependent factors VII and X) finally normalized only 7 weeks after chlorophacinone ingestion."
    explanation: >-
      Factor X activity was depressed and was tracked to normalization in a
      chlorophacinone poisoning.
- category: Hematologic
  name: Hematuria
  description: >-
    Blood in the urine, frequently with flank pain from clot passage. This is
    the single most commonly reported bleeding manifestation of anticoagulant
    rodenticide poisoning.
  phenotype_term:
    preferred_term: Hematuria
    term:
      id: HP:0000790
      label: Hematuria
  evidence:
  - reference: PMID:40974629
    reference_title: "A retrospective analysis of 88 anticoagulant rodenticide poisoning cases: Characteristics and forensic implications."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "Multi-organ hemorrhage was the predominant clinical manifestation, with hematuria being the most frequently reported symptom (n = 39)."
    explanation: >-
      Establishes haematuria as the most frequently reported bleeding
      manifestation, in 39 of 88 pooled cases. No frequency band is curated
      from that proportion: the series is a synthesis of published case
      reports and so is enriched for severe and fatal presentations, and this
      entry's own epidemiology records that only about 2 per cent of reported
      exposures produce morbidity at all. The sources support a rank, not a
      rate. Marked indirect because the denominator covers anticoagulant
      rodenticides collectively rather than chlorophacinone alone.
  - reference: PMID:26239439
    reference_title: "Long-Acting Anticoagulant Rodenticide (Superwarfarin) Poisoning: A Review of Its Historical Development, Epidemiology, and Clinical Management."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "The most frequently reported bleeding sites are mucocutaneous, with hematuria being the most common feature."
    explanation: >-
      An independent review of 174 cases reaches the same ranking. Marked indirect
      because it gives a rank rather than a proportion, and is class-level.
- category: Hematologic
  name: Epistaxis
  phenotype_term:
    preferred_term: Epistaxis
    term:
      id: HP:0000421
      label: Epistaxis
  evidence:
  - reference: PMID:16499407
    reference_title: "Anticoagulant rodenticides."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "Substantial ingestion produces epistaxis, gingival bleeding, widespread bruising, haematomas, haematuria with flank pain, menorrhagia, gastrointestinal bleeding, rectal bleeding and haemorrhage into any internal organ; anaemia may result."
    explanation: >-
      Lists epistaxis among the bleeding manifestations of substantial
      anticoagulant rodenticide ingestion.
- category: Hematologic
  name: Gingival Bleeding
  phenotype_term:
    preferred_term: Gingival bleeding
    term:
      id: HP:0000225
      label: Gingival bleeding
  evidence:
  - reference: PMID:16499407
    reference_title: "Anticoagulant rodenticides."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "Substantial ingestion produces epistaxis, gingival bleeding, widespread bruising, haematomas, haematuria with flank pain, menorrhagia, gastrointestinal bleeding, rectal bleeding and haemorrhage into any internal organ; anaemia may result."
    explanation: >-
      Lists gingival bleeding among the mucocutaneous manifestations.
- category: Hematologic
  name: Widespread Bruising
  phenotype_term:
    preferred_term: Bruising susceptibility
    term:
      id: HP:0000978
      label: Bruising susceptibility
  evidence:
  - reference: PMID:16499407
    reference_title: "Anticoagulant rodenticides."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "Substantial ingestion produces epistaxis, gingival bleeding, widespread bruising, haematomas, haematuria with flank pain, menorrhagia, gastrointestinal bleeding, rectal bleeding and haemorrhage into any internal organ; anaemia may result."
    explanation: >-
      Lists widespread bruising and haematomas among the manifestations.
- category: Gastrointestinal
  name: Gastrointestinal Hemorrhage
  phenotype_term:
    preferred_term: Gastrointestinal hemorrhage
    term:
      id: HP:0002239
      label: Gastrointestinal hemorrhage
  evidence:
  - reference: PMID:16499407
    reference_title: "Anticoagulant rodenticides."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "Substantial ingestion produces epistaxis, gingival bleeding, widespread bruising, haematomas, haematuria with flank pain, menorrhagia, gastrointestinal bleeding, rectal bleeding and haemorrhage into any internal organ; anaemia may result."
    explanation: >-
      Lists gastrointestinal and rectal bleeding among the manifestations.
- category: Gastrointestinal
  name: Hematochezia
  phenotype_term:
    preferred_term: Hematochezia
    term:
      id: HP:0002573
      label: Hematochezia
  evidence:
  - reference: PMID:16499407
    reference_title: "Anticoagulant rodenticides."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "Substantial ingestion produces epistaxis, gingival bleeding, widespread bruising, haematomas, haematuria with flank pain, menorrhagia, gastrointestinal bleeding, rectal bleeding and haemorrhage into any internal organ; anaemia may result."
    explanation: >-
      Lists rectal bleeding separately from gastrointestinal bleeding among the
      manifestations.
- category: Neurologic
  name: Intracranial Hemorrhage
  description: >-
    Bleeding into the cranial vault, including intracerebral and intracerebellar
    haemorrhage. This is the manifestation most often responsible for death.
  phenotype_term:
    preferred_term: Intracranial hemorrhage
    term:
      id: HP:0002170
      label: Intracranial hemorrhage
  severity: SEVERE
  evidence:
  - reference: PMID:26239439
    reference_title: "Long-Acting Anticoagulant Rodenticide (Superwarfarin) Poisoning: A Review of Its Historical Development, Epidemiology, and Clinical Management."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "Deaths were most commonly associated with intracranial hemorrhage."
    explanation: >-
      Identifies intracranial haemorrhage as the leading fatal event across
      174 reviewed cases. Marked indirect because the review is class-level.
- category: Hematologic
  name: Hemoperitoneum
  phenotype_term:
    preferred_term: Hemoperitoneum
    term:
      id: HP:0011854
      label: Hemoperitoneum
  evidence:
  - reference: PMID:16499407
    reference_title: "Anticoagulant rodenticides."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "Spontaneous haemoperitoneum has been described."
    explanation: >-
      Reports spontaneous haemoperitoneum in anticoagulant rodenticide
      poisoning.
- category: Genitourinary
  name: Menorrhagia
  phenotype_term:
    preferred_term: Menorrhagia
    term:
      id: HP:0000132
      label: Menorrhagia
  evidence:
  - reference: PMID:16499407
    reference_title: "Anticoagulant rodenticides."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "Substantial ingestion produces epistaxis, gingival bleeding, widespread bruising, haematomas, haematuria with flank pain, menorrhagia, gastrointestinal bleeding, rectal bleeding and haemorrhage into any internal organ; anaemia may result."
    explanation: >-
      Lists menorrhagia among the bleeding manifestations.
- category: Genitourinary
  name: Flank Pain
  phenotype_term:
    preferred_term: Flank pain
    term:
      id: HP:0030157
      label: Flank pain
  evidence:
  - reference: PMID:16499407
    reference_title: "Anticoagulant rodenticides."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "Substantial ingestion produces epistaxis, gingival bleeding, widespread bruising, haematomas, haematuria with flank pain, menorrhagia, gastrointestinal bleeding, rectal bleeding and haemorrhage into any internal organ; anaemia may result."
    explanation: >-
      Flank pain is reported accompanying haematuria.
- category: Hematologic
  name: Anemia
  phenotype_term:
    preferred_term: Anemia
    term:
      id: HP:0001903
      label: Anemia
  evidence:
  - reference: PMID:16499407
    reference_title: "Anticoagulant rodenticides."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "Substantial ingestion produces epistaxis, gingival bleeding, widespread bruising, haematomas, haematuria with flank pain, menorrhagia, gastrointestinal bleeding, rectal bleeding and haemorrhage into any internal organ; anaemia may result."
    explanation: >-
      States that anaemia may follow the blood loss.
- category: Cardiovascular
  name: Hypovolemic Shock
  phenotype_term:
    preferred_term: Hypovolemic shock
    term:
      id: HP:0031274
      label: Hypovolemic shock
  severity: SEVERE
  evidence:
  - reference: PMID:16499407
    reference_title: "Anticoagulant rodenticides."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "Severe blood loss may result in hypovolaemic shock, coma and death."
    explanation: >-
      States hypovolaemic shock as a consequence of severe blood loss in
      anticoagulant rodenticide poisoning.
- category: Gastrointestinal
  name: Nausea
  description: >-
    Nausea with agitation was recorded in the early, pre-coagulopathic phase of
    a large deliberate chlorophacinone ingestion.
  phenotype_term:
    preferred_term: Nausea
    term:
      id: HP:0002018
      label: Nausea
  evidence:
  - reference: PMID:10216974
    reference_title: "Toxicological management of chlorophacinone poisoning."
    supports: SUPPORT
    directness: DIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "The examination revealed excitation and nausea, with a normal prothrombin index (PI)."
    explanation: >-
      Reports nausea at presentation, eight hours after ingestion and before
      the prothrombin index had fallen.
- category: Neurologic
  name: Coma
  phenotype_term:
    preferred_term: Coma
    term:
      id: HP:0001259
      label: Coma
  severity: SEVERE
  evidence:
  - reference: PMID:16499407
    reference_title: "Anticoagulant rodenticides."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "Severe blood loss may result in hypovolaemic shock, coma and death."
    explanation: >-
      Names coma as a terminal consequence of severe blood loss in
      anticoagulant rodenticide poisoning. Marked indirect because the sentence
      is class-level.
- category: Musculoskeletal
  name: Acute Compartment Syndrome
  description: >-
    Bleeding into a closed fascial compartment can raise compartment pressure
    enough to cause ischaemic injury to the muscle and nerve within it. This is
    a surgically actionable complication that does not follow from haemorrhage
    and hypovolaemia alone, and diagnosis was delayed five days in the reported
    case.
  evidence:
  - reference: PMID:32447894
    reference_title: "[A case of acute osteofascial compartment syndrome caused by rodenticide poisoning]."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "The early manifestations of this patient were mainly coagulation dysfunction, and finally acute osteofascial compartment syndrome."
    explanation: >-
      Reports compartment syndrome following anticoagulant rodenticide
      poisoning. Marked indirect because the case report names the agent only
      as an anticoagulant rodenticide, not as chlorophacinone. No phenotype
      term is bound: HPO has no compartment syndrome term.
biochemical:
- name: Plasma chlorophacinone concentration
  presence: PRESENT
  evidence:
  - reference: PMID:10216974
    reference_title: "Toxicological management of chlorophacinone poisoning."
    supports: SUPPORT
    directness: DIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "Comprehensive testing for abused and therapeutic drugs in blood confirmed chlorophacinone (maximum plasma level: 27.6 mg/L), an antivitamin K (AVK) rodenticide."
    explanation: >-
      Reports a measured maximum plasma chlorophacinone concentration in a
      human poisoning.
  - reference: PMID:2769823
    reference_title: "Chlorophacinone intoxication. A biological and toxicological study."
    supports: SUPPORT
    directness: DIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "Plasma chlorophacinone determinations were performed in three cases of intoxication."
    explanation: >-
      Establishes plasma chlorophacinone measurement as the analytical basis
      for confirming and following this poisoning.
  - reference: PMID:1522713
    reference_title: "Rapid high-performance liquid chromatographic assay of chlorophacinone in human serum."
    supports: SUPPORT
    directness: DIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "Application of this method to 20 intoxicated patients indicated that the risk of bleeding syndrome, which is always associated with this kind of intoxication, is no longer present when chlorophacinone levels drop to below 1 microgram/mL."
    explanation: >-
      The largest chlorophacinone-specific human series available here, twenty
      poisoned patients, and the only source proposing a serum concentration
      below which bleeding risk has resolved.
  notes: >-
    Quantification of chlorophacinone in plasma or serum confirms the agent and
    tracks the exposure. It is measured by HPLC or LC-MS/MS. Concentrations
    after large deliberate ingestion reach tens of mg/L. A plasma concentration
    in the reference range does not exclude ongoing poisoning: in the cited
    case the hypocoagulability persisted while chlorophacinone levels were low.
- name: International normalized ratio
  presence: PRESENT
  notes: >-
    The INR is the practical bedside measure of the coagulopathy and the
    quantity used to decide when and how long to give vitamin K1. In a
    poisoning that is not already bleeding, guidance is to measure it 36 to 48
    hours after exposure, since an INR drawn earlier can still be normal.
  evidence:
  - reference: PMID:16499407
    reference_title: "Anticoagulant rodenticides."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: OTHER
    snippet: "In all other cases, the INR should be measured 36-48 hours post exposure."
    explanation: >-
      States the recommended timing for INR measurement after anticoagulant
      rodenticide exposure, which is set by the delay before the coagulopathy
      declares itself.
  - reference: PMID:40974629
    reference_title: "A retrospective analysis of 88 anticoagulant rodenticide poisoning cases: Characteristics and forensic implications."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "Coagulation function tests revealed average values of aPTT, PT, and INR of aPTT: 110 (3.71 ∼ 212) s, PT: 100 (11.6 ∼ 300) s and INR: 9 (0.98 ∼ 38.2), respectively, all significantly exceeding normal ranges."
    explanation: >-
      Gives the observed INR range across 88 pooled anticoagulant rodenticide
      poisonings. Marked indirect because the series does not stratify by
      agent.
environmental:
- name: Chlorophacinone rodenticide exposure
  description: >-
    Exposure to chlorophacinone-containing rodenticide bait, concentrate or
    powder. Human exposure is most often unintentional and paediatric, but the
    cases that produce severe coagulopathy are typically deliberate ingestions
    of concentrate by adults. Occupational exposure is also reported.
  effect: TRIGGERS
  exposure_term:
    preferred_term: exposure to anticoagulant rodenticide
    term:
      id: ECTO:9002177
      label: exposure to anticoagulant rodenticide
    qualifiers:
    - predicate:
        preferred_term: has input
        term:
          id: RO:0002233
          label: has input
      value:
        preferred_term: chlorophacinone
        term:
          id: CHEBI:81796
          label: Chlorophacinone
  evidence:
  - reference: PMID:32645465
    reference_title: "Accidental chlorophacinone exposure of lactating ewes: Clinical follow-up and human health dietary implications."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: MODEL_ORGANISM
    snippet: "Chlorophacinone was detected in milk on day 2 post-exposure and remained quantifiable for at least 7 days in milk of these 11 ewes."
    explanation: >-
      Chlorophacinone transfers into the milk of exposed livestock, so a
      food-chain route to human exposure exists in principle. Marked indirect
      because the measurement is in sheep and the same paper concludes that
      dairy products after a one-week withdrawal pose low consumer risk; no
      human poisoning by this route is reported.
  - reference: PMID:16499407
    reference_title: "Anticoagulant rodenticides."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "Most cases of anticoagulant rodenticide exposure involve young children and, as a consequence, the amounts ingested are almost invariably small."
    explanation: >-
      Characterizes the dominant exposure population for anticoagulant
      rodenticides, of which chlorophacinone is one.
  - reference: PMID:16499407
    reference_title: "Anticoagulant rodenticides."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "Occupational exposure has also been reported."
    explanation: >-
      Records occupational exposure as an additional route for this class.
  - reference: PMID:40974629
    reference_title: "A retrospective analysis of 88 anticoagulant rodenticide poisoning cases: Characteristics and forensic implications."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "A total of 88 poisoning cases were identified, comprising 52 cases of accidental poisoning, 31 cases of suicidal poisoning, 3 cases of unknown poisoning and 2 cases of homicide."
    explanation: >-
      Gives the distribution of intent across reported anticoagulant
      rodenticide poisonings. Marked indirect because agents are pooled.
  influences_mechanisms:
  - target: Systemic Chlorophacinone Exposure
    environmental_effect: TRIGGERS
    causal_link_type: DIRECT
    description: >-
      Ingestion of chlorophacinone bait or concentrate is the route by which
      the systemic chlorophacinone burden is established.
    evidence:
    - reference: PMID:10216974
      reference_title: "Toxicological management of chlorophacinone poisoning."
      supports: SUPPORT
      directness: DIRECT
      evidence_source: HUMAN_CLINICAL
      snippet: "A 33-year-old man was admitted 8 hours after voluntary ingestion of 1875 mg of chlorophacinone (C'Operat 750 mL)."
      explanation: >-
        Ties ingestion of a named chlorophacinone product to the resulting
        systemic exposure in a human case.
treatments:
- name: High-Dose Prolonged Vitamin K1 (Phytomenadione)
  description: >-
    Phytomenadione (vitamin K1) is the antidote. Supplying vitamin K from
    outside restores the carboxylase cofactor that the inhibited epoxide
    reductase can no longer regenerate, and the coagulation profile corrects
    within hours. Because chlorophacinone persists, the dose required is far
    above ordinary warfarin reversal doses and treatment must continue for
    weeks; withdrawal before the drug has cleared produces rebound
    coagulopathy.
  therapeutic_modality: SMALL_MOLECULE
  treatment_term:
    preferred_term: Pharmacotherapy
    term:
      id: NCIT:C15986
      label: Pharmacotherapy
    therapeutic_agent:
    - preferred_term: phylloquinone
      term:
        id: CHEBI:18067
        label: phylloquinone
  target_mechanisms:
  - target: Depletion of the Reduced Vitamin K Pool
    treatment_effect: RESTORES
    description: >-
      Exogenous vitamin K1 replenishes the substrate for the carboxylase
      cofactor pool without requiring the inhibited epoxide reductase.
    evidence:
    - reference: PMID:3222685
      reference_title: "[Prolonged anticoagulation following chlorophacinone poisoning]."
      supports: SUPPORT
      directness: DIRECT
      evidence_source: HUMAN_CLINICAL
      snippet: "Under high dose vitamin K therapy the Quick was rapidly corrected but fell again on each vitamin K withdrawal."
      explanation: >-
        Correction on vitamin K and relapse off it, in a chlorophacinone
        poisoning, is a direct demonstration that vitamin K supply is the
        limiting quantity this treatment restores.
  evidence:
  - reference: PMID:3222685
    reference_title: "[Prolonged anticoagulation following chlorophacinone poisoning]."
    supports: SUPPORT
    directness: DIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "This case emphasizes the need for prolonged clinical and laboratory follow-up for rodenticide intoxications and for vitamin K administration for several weeks."
    explanation: >-
      States the duration of vitamin K therapy required after chlorophacinone
      poisoning.
  - reference: PMID:26239439
    reference_title: "Long-Acting Anticoagulant Rodenticide (Superwarfarin) Poisoning: A Review of Its Historical Development, Epidemiology, and Clinical Management."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "Treatment of acute hemorrhagic symptoms often required intravenous vitamin K1 in excess of 50 to 100 mg; chronic maintenance with 100 mg PO vitamin K1 daily was the most frequently used dose required to suppress coagulopathy."
    explanation: >-
      Gives the dose magnitude actually used across reported cases. Marked indirect
      because the doses are pooled across long-acting anticoagulant
      rodenticides rather than reported for chlorophacinone alone.
  - reference: PMID:26239439
    reference_title: "Long-Acting Anticoagulant Rodenticide (Superwarfarin) Poisoning: A Review of Its Historical Development, Epidemiology, and Clinical Management."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "Treatment courses averaged 168 days."
    explanation: >-
      Quantifies treatment duration across the reviewed cases. Marked indirect
      for the same class-level reason, and the figure should not be read as a
      chlorophacinone expectation: the reviewed long-acting cases are dominated
      by brodifacoum, whose effect outlasts chlorophacinone's.
  - reference: PMID:31857739
    reference_title: "Superwarfarin (Long-Acting Anticoagulant Rodenticides) Poisoning: from Pathophysiology to Laboratory-Guided Clinical Management."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: OTHER
    snippet: "Treatment for superwarfarin poisoning includes rapid correction of factor deficiencies with either 4-factor prothrombin complex concentrate or fresh frozen plasma in patients with active bleeding, and high dose vitamin K therapy given multiple times per day for a prolonged period of weeks to months."
    explanation: >-
      Gives the dosing frequency and the duration of high-dose vitamin K.
      Marked indirect because the review speaks for the long-acting class.
  - reference: PMID:16499407
    reference_title: "Anticoagulant rodenticides."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: OTHER
    snippet: "If there is no active bleeding and the INR is < or =4.0, no treatment is required; if the INR is > or =4.0 phytomenadione 10mg should be administered intravenously."
    explanation: >-
      Gives the INR threshold at which vitamin K is started in a patient who
      is not bleeding, which is the decision this treatment turns on.
- name: Coagulation Factor Replacement
  description: >-
    For active bleeding, immediate replacement of the missing factors is given
    alongside vitamin K1, since vitamin K takes hours to restore carboxylation.
    Prothrombin complex concentrate is preferred because it contains exactly
    the four deficient factors; fresh frozen plasma is the fallback, and
    recombinant activated factor VII has also been used.
  therapeutic_modality: PROTEIN_REPLACEMENT
  treatment_term:
    preferred_term: Pharmacotherapy
    term:
      id: NCIT:C15986
      label: Pharmacotherapy
    therapeutic_agent:
    - preferred_term: four-factor prothrombin complex concentrate
      term:
        id: NCIT:C208347
        label: Four-factor Prothrombin Complex Concentrate
  target_mechanisms:
  - target: Functional Deficiency of Coagulation Factors II, VII, IX and X
    treatment_effect: BYPASSES
    description: >-
      Transfused factor concentrate supplies fully carboxylated factors
      directly, bypassing the blocked hepatic carboxylation step.
    evidence:
    - reference: PMID:16499407
      reference_title: "Anticoagulant rodenticides."
      supports: SUPPORT
      directness: INDIRECT
      evidence_source: OTHER
      snippet: "If active bleeding occurs, prothrombin complex concentrate (which contains factors II, VII, IX and X) 50 units/kg, or recombinant activated factor VII 1.2-4.8 mg or fresh frozen plasma 15 mL/kg (if no concentrate is available) and phytomenadione 10mg intravenously (100 microg/kg bodyweight for a child) should be given."
      explanation: >-
        Specifies replacement of precisely the four deficient factors as the
        treatment for active bleeding.
  evidence:
  - reference: PMID:26239439
    reference_title: "Long-Acting Anticoagulant Rodenticide (Superwarfarin) Poisoning: A Review of Its Historical Development, Epidemiology, and Clinical Management."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "Adjunctive hemostatic therapy with recombinant factor VIIa and prothrombin complex concentrate has been reported, and phenobarbital has been used to expedite LAAR metabolism."
    explanation: >-
      Confirms the adjunctive haemostatic agents used in practice. Marked indirect
      because the review pools long-acting anticoagulant rodenticides.
  - reference: PMID:31857739
    reference_title: "Superwarfarin (Long-Acting Anticoagulant Rodenticides) Poisoning: from Pathophysiology to Laboratory-Guided Clinical Management."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: OTHER
    snippet: "Treatment for superwarfarin poisoning includes rapid correction of factor deficiencies with either 4-factor prothrombin complex concentrate or fresh frozen plasma in patients with active bleeding"
    explanation: >-
      Names four-factor prothrombin complex concentrate ahead of fresh frozen
      plasma and confines factor replacement to patients who are bleeding.
      Marked indirect because the review speaks for the long-acting class.
  notes: >-
    Thrombotic complications accompanying haemostatic therapy have been
    reported in this class of poisoning, so factor replacement is reserved for
    active bleeding rather than used to correct a number. Only four-factor
    prothrombin complex concentrate is bound as a therapeutic_agent.
    Recombinant activated factor VII and fresh frozen plasma, both named in
    the same recommendation, are not: no suitable term was resolved for
    either.
- name: Phenobarbital Enzyme Induction
  description: >-
    Phenobarbital has been used to accelerate hepatic metabolism of
    chlorophacinone and shorten the coagulopathy. In one human case the
    apparent elimination half-life under phenobarbital was 3.27 days, shorter
    than in previously reported cases. This is an adjunct with limited
    evidence, not standard care.
  therapeutic_modality: SMALL_MOLECULE
  treatment_term:
    preferred_term: Pharmacotherapy
    term:
      id: NCIT:C15986
      label: Pharmacotherapy
    therapeutic_agent:
    - preferred_term: phenobarbital
      term:
        id: CHEBI:8069
        label: phenobarbital
  target_mechanisms:
  - target: Hepatic Accumulation and Prolonged Elimination
    treatment_effect: INHIBITS
    description: >-
      Cytochrome P450 induction increases the rate at which chlorophacinone is
      cleared, shortening the period over which it can inhibit the vitamin K
      cycle.
    evidence:
    - reference: PMID:2769823
      reference_title: "Chlorophacinone intoxication. A biological and toxicological study."
      supports: SUPPORT
      directness: DIRECT
      evidence_source: HUMAN_CLINICAL
      snippet: "An increased elimination was noted when phenobarbital was administered."
      explanation: >-
        Reports increased chlorophacinone elimination on phenobarbital. The
        observation is from a single uncontrolled case within a three-patient
        series, so it is weak evidence for a directly stated result.
  evidence:
  - reference: PMID:10216974
    reference_title: "Toxicological management of chlorophacinone poisoning."
    supports: SUPPORT
    directness: DIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "Under phenobarbital 200 mg/day, chlorophacinone exhibited an apparent elimination half-life (3.27 days) shorter than in previously reported cases."
    explanation: >-
      Quantifies the half-life observed under phenobarbital against a
      historical comparison. The comparison is with previously
      reported cases rather than a control arm, so the effect size is not
      established.
  notes: >-
    Recorded because it is the specific adjunct repeatedly tried in
    chlorophacinone poisoning, not because the evidence is strong. Both
    supporting reports are uncontrolled single-patient observations with
    historical comparators.
diagnosis:
- name: Delayed coagulation testing after exposure
  description: >-
    The coagulopathy is not present at the moment of exposure. Prothrombin
    time and INR should be measured 36 to 48 hours after exposure, because an
    earlier normal result does not exclude poisoning. In a case series the
    median latency to presentation was four days.
  evidence:
  - reference: PMID:16499407
    reference_title: "Anticoagulant rodenticides."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: OTHER
    snippet: "There are now sufficient data in young children exposed to anticoagulant rodenticides to conclude that routine measurement of the international normalised ratio (INR) is unnecessary."
    explanation: >-
      States that the small unintentional paediatric ingestions which dominate
      reported exposures do not need routine coagulation testing, the
      counterweight to the 36 to 48 hour rule above. Marked indirect because it
      is a recommendation for the class rather than a chlorophacinone finding.
  - reference: PMID:17357377
    reference_title: "Long-acting anticoagulant rodenticide poisoning: an evidence-based consensus guideline for out-of-hospital management."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: OTHER
    snippet: "Patients with unintentional ingestion of less than 1 mg of LAAR active ingredient can be safely observed at home without laboratory monitoring."
    explanation: >-
      The consensus out-of-hospital guideline puts a dose threshold on that
      recommendation. Marked indirect because the guideline covers long-acting
      anticoagulant rodenticides collectively.
  - reference: PMID:17357377
    reference_title: "Long-acting anticoagulant rodenticide poisoning: an evidence-based consensus guideline for out-of-hospital management."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: OTHER
    snippet: "Patients with unintentional ingestion of 1 mg or more of active ingredient and are asymptomatic should be evaluated for coagulopathy at 48-72 hours after exposure (Grade B)."
    explanation: >-
      Gives the graded recommendation and testing window above that threshold.
      Marked indirect for the same class-level reason.
  - reference: PMID:2729812
    reference_title: "[Prolonged hypocoagulability following the ingestion of anticoagulant raticides]."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "The duration of the abnormalities is unpredictable; the prothrombin time should therefore be checked 48 hours after stopping Vitamin K therapy to detect any recurrence."
    explanation: >-
      Names the test that catches the rebound this entry models: a prothrombin
      time 48 hours after vitamin K is stopped. Marked indirect because the
      eleven-patient Paris series pools chlorophacinone with bromadiolone and
      warfarin.
  - reference: PMID:2729812
    reference_title: "[Prolonged hypocoagulability following the ingestion of anticoagulant raticides]."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "The absence of early clinical signs probably explains the number of late admissions."
    explanation: >-
      Attributes late presentation to the silent latent phase. Marked indirect
      because the series pools three anticoagulants.
  - reference: PMID:16499407
    reference_title: "Anticoagulant rodenticides."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: OTHER
    snippet: "In all other cases, the INR should be measured 36-48 hours post exposure."
    explanation: >-
      States the recommended timing of coagulation testing after exposure.
  - reference: PMID:40974629
    reference_title: "A retrospective analysis of 88 anticoagulant rodenticide poisoning cases: Characteristics and forensic implications."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "The median latency period was 4 days (range: 1 ∼ 30)."
    explanation: >-
      Quantifies the delay between exposure and clinical presentation.
      Marked indirect because the series pools anticoagulant rodenticides.
  notes: >-
    In young children with the small unintentional ingestions that dominate
    reported exposures, routine INR measurement is considered unnecessary.
- name: Suspicion on unexplained prothrombin time prolongation
  description: >-
    Where no exposure is reported, the poisoning is found by suspecting it.
    An unexplained prolonged prothrombin time is the trigger to send a
    rodenticide assay.
  evidence:
  - reference: PMID:31857739
    reference_title: "Superwarfarin (Long-Acting Anticoagulant Rodenticides) Poisoning: from Pathophysiology to Laboratory-Guided Clinical Management."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: OTHER
    snippet: "Superwarfarin poisoning should therefore be suspected in all patients with unexplained prolongation of prothrombin time, and can be confirmed by their detection in serum."
    explanation: >-
      States the diagnostic posture for this class of poisoning when the
      history is absent. Marked indirect because the review addresses the
      long-acting rodenticides collectively.
- name: Analytical confirmation of chlorophacinone
  description: >-
    Chlorophacinone is identified and quantified in plasma or serum by HPLC or
    LC-MS/MS. Analytical confirmation is what distinguishes chlorophacinone
    poisoning from the other anticoagulant rodenticides and from warfarin,
    since the coagulation profile alone cannot.
  evidence:
  - reference: PMID:10216974
    reference_title: "Toxicological management of chlorophacinone poisoning."
    supports: SUPPORT
    directness: DIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "A simple HPLC procedure for the determination of chlorophacinone in human plasma is reported for that purpose."
    explanation: >-
      Describes the analytical method by which chlorophacinone is confirmed in
      human plasma.
  - reference: PMID:39893780
    reference_title: "Simultaneous quantification of eighteen therapeutic oral anticoagulants, rodenticides, and antiplatelet agents by LC-MS/MS and its application in post-mortem forensic cases."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: OTHER
    snippet: "The method was validated according to the FDA recommendations for all compounds, with an eight-min run time in human whole blood, the gold standard in toxicological forensic investigation."
    explanation: >-
      Reports the validation result for a panel whose eighteen analytes
      include chlorophacinone, which is what allows the specific agent to be
      named rather than inferred. Marked indirect because performance is
      reported for all compounds together rather than for chlorophacinone
      alone.
progression:
- phase: Latent
  duration: 0 to 24 hours after exposure
  notes: >-
    Coagulation is still normal. Non-specific symptoms such as nausea may
    occur. A normal coagulation panel drawn in this window excludes nothing.
  evidence:
  - reference: PMID:10216974
    reference_title: "Toxicological management of chlorophacinone poisoning."
    supports: SUPPORT
    directness: DIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "The examination revealed excitation and nausea, with a normal prothrombin index (PI)."
    explanation: >-
      Eight hours after ingesting 1875 mg of chlorophacinone the prothrombin
      index was still normal, which fixes the latent phase.
- phase: Coagulopathy onset
  duration: about 1 to 4 days after exposure
  notes: >-
    Prothrombin time and INR rise as factor VII, the shortest-lived of the
    affected factors, is depleted. Bleeding may begin. The reported median
    latency to clinical presentation is four days.
  evidence:
  - reference: PMID:40974629
    reference_title: "A retrospective analysis of 88 anticoagulant rodenticide poisoning cases: Characteristics and forensic implications."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "The median latency period was 4 days (range: 1 ∼ 30)."
    explanation: >-
      Gives the interval from exposure to presentation. Marked indirect because
      the series pools anticoagulant rodenticides.
- phase: Resolution with rebound
  duration: weeks to months
  notes: >-
    Under vitamin K1 the coagulation profile corrects and relapses on each
    withdrawal. Full normalization took seven weeks in the reported case.
    Relapse here is the expected course, not a complication.
  evidence:
  - reference: PMID:3222685
    reference_title: "[Prolonged anticoagulation following chlorophacinone poisoning]."
    supports: SUPPORT
    directness: DIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "Prothrombin time (and vitamin K dependent factors VII and X) finally normalized only 7 weeks after chlorophacinone ingestion."
    explanation: >-
      Fixes the duration of the resolution phase in a chlorophacinone
      poisoning.
epidemiology:
- name: Registered field use in France
  description: >-
    Chlorophacinone's share of human poisoning is small and country-dependent,
    because it tracks the compound's registration. In France it is one of only
    two anticoagulants registered for field use, so it appears there far more
    than in series from countries where the second-generation compounds
    dominate.
  evidence:
  - reference: PMID:21171851
    reference_title: "Prevalence of anticoagulant rodenticide poisoning in humans and animals in France and substances involved."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "In wildlife, bromadiolone and chlorophacinone are by far the most important products, being the only ones registered for field use."
    explanation: >-
      States chlorophacinone's registration position in France, which is why
      the human case literature clusters there.
- name: Exposure circumstances and severity
  description: >-
    Reported anticoagulant rodenticide exposures are dominated by young
    children and are mostly accidental and clinically trivial. The severe cases
    come from deliberate adult ingestion.
  evidence:
  - reference: PMID:21171851
    reference_title: "Prevalence of anticoagulant rodenticide poisoning in humans and animals in France and substances involved."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "Overall, the proportion of anticoagulant exposure reported to the Lyon poison control center appeared very limited and mostly occurred in young children, with no or very limited clinical severity."
    explanation: >-
      Characterizes the exposure population and its severity in the French
      poison-centre data. Marked indirect because the figures cover
      anticoagulant rodenticides collectively.
  - reference: PMID:21171851
    reference_title: "Prevalence of anticoagulant rodenticide poisoning in humans and animals in France and substances involved."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "There is no report of mortality in the human data, and less than 1% of all exposure cases in domestic animals were fatal."
    explanation: >-
      Records the absence of deaths in four years of French human data, which
      is the counterweight to the severity of the published case reports.
      Marked indirect because agents are pooled.
- name: Reported burden in the United States
  description: >-
    United States poison-centre data for the long-acting anticoagulant
    rodenticides as a class give the order of magnitude of reported exposure.
    No chlorophacinone-specific incidence or prevalence figure exists.
  evidence:
  - reference: PMID:26239439
    reference_title: "Long-Acting Anticoagulant Rodenticide (Superwarfarin) Poisoning: A Review of Its Historical Development, Epidemiology, and Clinical Management."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "In the United States, on average, there were 10413 exposures reported with 2750 patients treated annually."
    explanation: >-
      Gives annual reported exposures and treated patients. Marked indirect
      because the figure covers the long-acting class, not chlorophacinone.
  - reference: PMID:26239439
    reference_title: "Long-Acting Anticoagulant Rodenticide (Superwarfarin) Poisoning: A Review of Its Historical Development, Epidemiology, and Clinical Management."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "Fortunately, only 2% of all exposures result in morbidity or mortality."
    explanation: >-
      Quantifies the proportion of reported exposures that matter clinically.
      Marked indirect for the same class-level reason.
  notes: >-
    These are reported exposures, not diagnosed cases of poisoning, and they
    cannot be separated by agent.
differential_diagnoses:
- name: Vitamin K-Dependent Coagulation Factor Deficiency
  disease_term:
    preferred_term: congenital vitamin K-dependent coagulation factors deficiency
    term:
      id: MONDO:0015722
      label: congenital vitamin K-dependent coagulation factors deficiency
  description: >-
    Biallelic germline variants in VKORC1 or GGCX produce the same combined
    deficiency of the vitamin K-dependent factors by disabling the same two
    steps that chlorophacinone blocks pharmacologically.
  distinguishing_features:
  - Germline VKORC1 or GGCX variants are present and the presentation is lifelong rather than following a single exposure.
  - No anticoagulant rodenticide is detectable on toxicological analysis.
  - Skeletal and other extra-haemostatic features of GGCX deficiency have no counterpart in an acute poisoning.
  notes: >-
    The genetic counterpart of the acquired lesion here, so an unexplained
    combined deficiency of the vitamin K-dependent factors should be worked up
    against both.
- name: Warfarin or other coumarin anticoagulant
  description: >-
    Therapeutic warfarin, warfarin overdose, and the other coumarin oral
    anticoagulants produce the same vitamin K antagonist coagulopathy through
    the same enzyme.
  distinguishing_features:
  - A drug history and a therapeutic indication are usually present.
  - Warfarin coagulopathy resolves within days of stopping the drug and responds to ordinary reversal doses of vitamin K, not to months of high-dose therapy.
  - Analytical confirmation separates the compounds.
  evidence:
  - reference: PMID:26239439
    reference_title: "Long-Acting Anticoagulant Rodenticide (Superwarfarin) Poisoning: A Review of Its Historical Development, Epidemiology, and Clinical Management."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: OTHER
    snippet: "Long-acting anticoagulant rodenticides have an extremely high affinity for VKOR compared with warfarin, characterized by rebound coagulopathy and bleeding after initial treatment and the need for high-dose, long-term therapy with vitamin K1."
    explanation: >-
      Contrasts the rodenticide course with warfarin's, which is the
      distinguishing feature. Marked indirect because the review speaks for the
      long-acting class.
- name: Liver failure
  description: >-
    Hepatic synthetic failure also depresses the vitamin K-dependent factors
    and prolongs the prothrombin time.
  distinguishing_features:
  - Factor V is synthesized in the liver but is not vitamin K dependent, so it is reduced in liver failure and unaffected by a vitamin K antagonist. This factor V versus factor VII pattern is the standard discriminator; no source cited in this entry reports it, so it is recorded as clinical convention rather than curated as evidenced content.
  - Other markers of hepatic failure, such as bilirubin, albumin and transaminases, are deranged.
  - The coagulopathy of liver failure does not correct on high-dose vitamin K1 and does not rebound on its withdrawal.
- name: Disseminated intravascular coagulation
  description: >-
    Consumptive coagulopathy also prolongs the prothrombin time and causes
    multi-site bleeding.
  distinguishing_features:
  - Platelet count and fibrinogen are low and D-dimer is raised in disseminated intravascular coagulation; a vitamin K antagonist leaves the platelet count and fibrinogen untouched.
  - A precipitating illness such as sepsis, malignancy or obstetric catastrophe is present.
  - Recorded as clinical convention. No source cited in this entry reports these discriminating values.
- name: Other anticoagulant rodenticide poisoning
  description: >-
    Brodifacoum, bromadiolone, difenacoum, difethialone, flocoumafen and
    coumatetralyl produce a clinically indistinguishable coagulopathy through
    the same target. In pooled case series brodifacoum and bromadiolone are the
    agents most often identified.
  distinguishing_features:
  - Only analytical confirmation separates the agents; the coagulation profile does not.
  - The second-generation compounds persist far longer, so treatment courses run months rather than weeks.
  evidence:
  - reference: PMID:40974629
    reference_title: "A retrospective analysis of 88 anticoagulant rodenticide poisoning cases: Characteristics and forensic implications."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "About the types of rodenticides, a total of 38 cases reported 7 distinct types, with brodifacoum and bromadiolone being the most common"
    explanation: >-
      Establishes that several agents in this class present the same way and
      that the commonest identified are not chlorophacinone. Marked indirect
      because the sentence is about agent distribution rather than about
      distinguishing them clinically.
animal_models:
- name: Accidental chlorophacinone poisoning in calves
  species: Cattle
  genotype: wild type
  description: >-
    Fourteen crossbred calves ingested chlorophacinone powder present in their
    housing. Three were submitted for necropsy, with chlorophacinone confirmed
    in liver at 2.9 to 4.2 ppm. This is a naturally occurring, dose-uncontrolled
    veterinary poisoning rather than a designed experimental model, and it is
    recorded here because it couples a confirmed chlorophacinone tissue burden
    to a documented anatomical distribution of haemorrhage.
  publication: PMID:35000500
  evidence:
  - reference: PMID:35000500
    reference_title: "Acute hemorrhage and death in calves following chlorophacinone exposure."
    supports: SUPPORT
    directness: DIRECT
    evidence_source: MODEL_ORGANISM
    snippet: "Three calves were submitted to the Iowa State University Veterinary Diagnostic Laboratory for diagnostic evaluation following an abrupt increase in morbidity and mortality in a calf herd associated with epistaxis and widespread hemorrhage."
    explanation: >-
      Establishes the exposure event and the animals examined, which is what
      this entry records as a naturally occurring chlorophacinone poisoning.
  modeled_mechanisms:
  - target: Multicompartment Hemorrhage
    relationship: RECAPITULATES
    fidelity: MODERATE
    description: >-
      Reproduces the multicompartment haemorrhage of human chlorophacinone
      poisoning, with the same agent confirmed analytically in tissue.
    limitations: >-
      An uncontrolled accidental exposure in a ruminant, with no measured
      ingested dose, no coagulation assays reported, and no treatment arm.
      Bovine vitamin K handling and rumen microbial vitamin K synthesis differ
      from human, so the dose-response cannot be carried across.
    readouts:
    - name: Chlorophacinone concentration in liver
      target: Multicompartment Hemorrhage
      direction: INCREASED
      interpretation: >-
        Confirms that the haemorrhage occurred against a measured
        chlorophacinone tissue burden rather than a presumed exposure.
      evidence:
      - reference: PMID:35000500
        reference_title: "Acute hemorrhage and death in calves following chlorophacinone exposure."
        supports: SUPPORT
        directness: DIRECT
        evidence_source: MODEL_ORGANISM
        snippet: "Significant concentrations of chlorophacinone were detected at 4.2, 3.6, and 2.9 ppm in liver."
        explanation: >-
          Reports the measured hepatic chlorophacinone concentrations.
    evidence:
    - reference: PMID:35000500
      reference_title: "Acute hemorrhage and death in calves following chlorophacinone exposure."
      supports: SUPPORT
      directness: DIRECT
      evidence_source: MODEL_ORGANISM
      snippet: "Acute hemorrhage and death occurred in fourteen 1.5-mo-old, crossbred calves following ingestion of the vitamin K antagonist chlorophacinone."
      explanation: >-
        Attributes acute haemorrhage and death to chlorophacinone ingestion,
        which is what makes this exposure informative for the haemorrhage node.
- name: Accidental chlorophacinone poisoning in lambs
  species: Sheep
  genotype: wild type
  description: >-
    Eleven lambs reached old bait placed between the wall studs of their
    housing through a hole in the plywood. Two were necropsied, with
    chlorophacinone confirmed in liver at 0.58 and 0.50 ppm. A second species
    with a confirmed chlorophacinone tissue burden, and the source of the
    tempo: these animals died within one to two hours of the first sign.
  publication: PMID:17037620
  evidence:
  - reference: PMID:17037620
    reference_title: "Chlorophacinone exposure causing an epizootic of acute fatal hemorrhage in lambs."
    supports: SUPPORT
    directness: DIRECT
    evidence_source: MODEL_ORGANISM
    snippet: "The anticoagulant chlorophacinone was detected in the livers at 0.58 ppm and 0.50 ppm (wet weight), respectively."
    explanation: >-
      Confirms chlorophacinone analytically in the affected animals, which is
      what makes this exposure informative rather than presumptive.
  modeled_mechanisms:
  - target: Multicompartment Hemorrhage
    relationship: RECAPITULATES
    fidelity: MODERATE
    description: >-
      Reproduces multicompartment haemorrhage with epistaxis as the presenting
      sign, in a second ruminant species and at liver concentrations roughly
      sixfold below the calf series.
    limitations: >-
      An uncontrolled accidental exposure with no measured ingested dose, no
      coagulation assays, and no treatment arm. The liver concentrations differ
      sixfold from the calf epizootic, and age, species and dose timing all
      differ, so no lethal threshold can be derived from the pair. The
      centrilobular hepatocellular necrosis reported at necropsy is most
      parsimoniously hypoxic in an exsanguinating animal and is deliberately
      not curated as chlorophacinone hepatotoxicity. Ovine vitamin K handling,
      including rumen microbial synthesis, differs from human.
    readouts:
    - name: Time from first clinical sign to death
      target: Multicompartment Hemorrhage
      direction: DECREASED
      interpretation: >-
        Records how fast the haemorrhagic phase can run once it declares
        itself in a heavily exposed animal.
      evidence:
      - reference: PMID:17037620
        reference_title: "Chlorophacinone exposure causing an epizootic of acute fatal hemorrhage in lambs."
        supports: SUPPORT
        directness: DIRECT
        evidence_source: MODEL_ORGANISM
        snippet: "Affected animals died within 1-2 hours from the onset of clinical signs."
        explanation: >-
          Reports the interval measured in the affected lambs.
    evidence:
    - reference: PMID:17037620
      reference_title: "Chlorophacinone exposure causing an epizootic of acute fatal hemorrhage in lambs."
      supports: SUPPORT
      directness: DIRECT
      evidence_source: MODEL_ORGANISM
      snippet: "Eleven lambs, approximately 1-2 months of age, suddenly developed epistaxis, respiratory distress, and facial and cervical swelling."
      explanation: >-
        Documents the presenting haemorrhagic syndrome attributed to
        chlorophacinone in this epizootic.
discussions:
- discussion_id: protein_c_s_paradoxical_thrombosis
  kind: KNOWLEDGE_GAP
  prompt: >-
    Does loss of gamma-carboxylation of the anticoagulant proteins C and S
    explain the thrombotic events reported in anticoagulant rodenticide
    poisoning?
  attaches_to:
  - "pathophysiology#Impaired Gamma-Carboxylation of Vitamin K-Dependent Clotting Factors"
  rationale: >-
    Proteins C and S are vitamin K-dependent substrates of the same hepatic
    carboxylase as factors II, VII, IX and X, so a vitamin K antagonist
    depletes anticoagulant and procoagulant proteins together. Thrombotic
    events, including a fatal cerebral vein thrombosis reported as a suspected
    chlorophacinone poisoning, occur in this class and are difficult to
    reconcile with pure anticoagulation. No cited source here measures protein
    C or protein S activity in a chlorophacinone poisoning, so the mechanism
    is left as an open question rather than curated as a causal edge.
  evidence:
  - reference: PMID:16716547
    reference_title: "Lethal paradoxical cerebral vein thrombosis due to suspicious anticoagulant rodenticide intoxication with chlorophacinone."
    supports: SUPPORT
    directness: DIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "The authors report a case of suspicious chlorophacinone poisoning with a problematic diagnosis."
    explanation: >-
      Reports a fatal thrombotic event in a chlorophacinone poisoning. The
      paper's own wording is "suspicious" with a "problematic diagnosis", so
      it is cited here as a case that raises the question, not as a settled
      attribution.
  - reference: PMID:26239439
    reference_title: "Long-Acting Anticoagulant Rodenticide (Superwarfarin) Poisoning: A Review of Its Historical Development, Epidemiology, and Clinical Management."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "Long-acting anticoagulant rodenticide-induced paradoxical thrombosis and thrombotic complications accompanying hemostatic therapy have also been observed."
    explanation: >-
      Confirms paradoxical thrombosis is observed across the class and
      separates it from thrombosis caused by haemostatic therapy. Marked indirect
      because it reports the observation without testing a mechanism.
- discussion_id: persistence_after_plasma_clearance
  kind: KNOWLEDGE_GAP
  prompt: >-
    Why does chlorophacinone-induced hypocoagulability persist after plasma
    chlorophacinone concentrations have fallen to low values?
  attaches_to:
  - "pathophysiology#Hepatic Accumulation and Prolonged Elimination"
  rationale: >-
    In a monitored human poisoning the hypocoagulability outlasted the
    measurable plasma concentration. The treating authors offered two
    candidate explanations, accumulation in target cells and an unidentified
    active metabolite, and distinguished neither. Which of the two operates
    determines whether plasma chlorophacinone concentration is a usable guide
    to stopping vitamin K therapy.
  proposed_experiments:
  - experiment_id: chlorophacinone_metabolite_vs_compartment
    name: Paired hepatic and plasma chlorophacinone measurement with metabolite profiling
    description: >-
      Measure chlorophacinone and its metabolites in plasma alongside INR
      through the resolution phase of human poisonings, with untargeted
      metabolite profiling, to determine whether a persisting parent compound
      compartment or an active metabolite accounts for the residual effect.
  evidence:
  - reference: PMID:23109180
    reference_title: "Bioaccumulation of chlorophacinone in strains of rats resistant to anticoagulants."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: MODEL_ORGANISM
    snippet: "Extensive metabolism of chlorophacinone was also found, and was similar (in nature and proportion of metabolites) across strains (3 OH-metabolites identified)."
    explanation: >-
      Three hydroxy-metabolites of chlorophacinone have been identified in rat,
      so the metabolite arm of this question is not that no metabolite is known
      but that none has been shown active in humans. Marked indirect because
      the work is in rat.
  - reference: PMID:23109180
    reference_title: "Bioaccumulation of chlorophacinone in strains of rats resistant to anticoagulants."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: MODEL_ORGANISM
    snippet: "Accumulation of chlorophacinone occurs from day 1 to day 4, and an equilibrium is reached, suggesting rapid elimination."
    explanation: >-
      Cuts against the tissue-accumulation arm: hepatic chlorophacinone reaches
      a plateau within four days in rat, which the authors read as rapid
      elimination rather than indefinite retention. Marked indirect because the
      work is in rat and because the human coagulopathy is what needs
      explaining.
  - reference: PMID:10216974
    reference_title: "Toxicological management of chlorophacinone poisoning."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: HUMAN_CLINICAL
    snippet: "Chlorophacinone accumulation in target cells or existence of an unidentified metabolite may explain persistence of the hypocoagulability syndrome at low plasmatic concentrations of chlorophacinone."
    explanation: >-
      States the unresolved alternative explanations directly.
- discussion_id: first_generation_versus_long_acting
  kind: INTERPRETATION
  prompt: >-
    Should chlorophacinone be curated as a first-generation anticoagulant
    rodenticide or as a long-acting anticoagulant rodenticide?
  rationale: >-
    Two authoritative sources place chlorophacinone in opposite groups, and
    both are right on their own terms. Watt and colleagues group it with the
    long-acting rodenticides on human duration of effect. Esther and
    colleagues list it with warfarin and coumatetralyl as first-generation,
    which is a statement about rodent potency and the number of feeds needed
    to kill a rat. "Generation" is a rodent-efficacy term and "long-acting" is
    a human-toxicology term, so chlorophacinone is first-generation by potency
    and long-acting by duration. The distinction matters clinically, because
    the first-generation label wrongly implies a warfarin-length course of
    treatment. This entry curates the human-toxicology reading and records the
    conflict rather than resolving it silently.
  evidence:
  - reference: PMID:16499407
    reference_title: "Anticoagulant rodenticides."
    supports: SUPPORT
    directness: DIRECT
    evidence_source: OTHER
    snippet: "This group includes the second generation 4-hydroxycoumarins brodifacoum, bromadiolone, difenacoum, flocoumafen and the indanedione derivatives chlorophacinone and diphacinone."
    explanation: >-
      Places chlorophacinone in the long-acting anticoagulant rodenticide
      group.
  - reference: PMID:24781908
    reference_title: "[Rodenticide resistance and consequences]."
    supports: SUPPORT
    directness: DIRECT
    evidence_source: OTHER
    snippet: "Anticoagulants of the first generation (warfarin, chlorophacinone, coumatetralyl) as well as bromadiolone and difenacoum are not an option for the control of resistant Norway rats."
    explanation: >-
      Places chlorophacinone in the first-generation group, in a
      rodent-control context.
- discussion_id: indandione_mitochondrial_uncoupling
  kind: KNOWLEDGE_GAP
  prompt: >-
    Do indandione anticoagulants, chlorophacinone among them, uncouple
    oxidative phosphorylation, and does that contribute to human toxicity
    beyond the coagulopathy?
  attaches_to:
  - "pathophysiology#Systemic Chlorophacinone Exposure"
  rationale: >-
    Toxicology reference texts repeatedly describe the indandiones as
    uncouplers of oxidative phosphorylation, a property the 4-hydroxycoumarins
    are said to lack, and attribute cardiopulmonary and neurologic injury in
    laboratory rodents to it. The claim is not curated here because no primary
    source for it could be located: PubMed queries pairing chlorophacinone,
    and separately indandione, diphacinone and pindone, with uncoupling,
    mitochondria and oxidative phosphorylation returned no records. The gap is
    recorded rather than the claim, because a widely repeated mechanism with
    no retrievable primary citation is worth flagging. Note that
    chlorophacinone does have a documented off-target activity, FXR
    antagonism, cited below; the absent evidence is for uncoupling in
    particular, not for off-target action in general.
  proposed_experiments:
  - experiment_id: chlorophacinone_mitochondrial_respirometry
    name: Respirometry of isolated mitochondria exposed to chlorophacinone
    description: >-
      Measure oxygen consumption, membrane potential and ATP synthesis in
      isolated hepatic and cardiac mitochondria across a chlorophacinone
      concentration range spanning those reached in human poisoning, against a
      4-hydroxycoumarin comparator and a known uncoupler control, to establish
      whether the uncoupling property exists and at what concentration.
  evidence:
  - reference: PMID:27773686
    reference_title: "Differential modulation of FXR activity by chlorophacinone and ivermectin analogs."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: IN_VITRO
    snippet: "Our results showed that chlorophacinone and ivermectin had distinct modes of action (MOA) in modulating FXR-coregulator interactions and compound selectivity against the four aforementioned functionally-relevant nuclear receptors."
    explanation: >-
      Chlorophacinone has a documented off-target activity, antagonism of the
      nuclear receptor FXR in a validated screen. It is cited here so this gap
      is not read as "chlorophacinone has no off-target activity"; what lacks a
      primary source is uncoupling specifically. Marked indirect because the
      assays are cell-based and the paper makes no claim about human poisoning.
  notes: >-
    The cited evidence item records a different off-target mechanism rather
    than the uncoupling claim itself. No source is offered for uncoupling,
    because that is the point of the entry: attaching a reference that does
    not make the claim would defeat it.
- discussion_id: cyp_induction_transferability
  kind: INTERPRETATION
  prompt: >-
    Does the published argument against using cytochrome P450 inducers in
    long-acting anticoagulant rodenticide poisoning apply to chlorophacinone?
  attaches_to:
  - "pathophysiology#Hepatic Accumulation and Prolonged Elimination"
  rationale: >-
    This entry curates phenobarbital enzyme induction as a reported adjunct.
    A published position argues against CYP inducers in this poisoning, but its
    reasoning is specific to brodifacoum, which the authors state does not
    undergo significant hepatic metabolism. Chlorophacinone does: three
    hydroxy-metabolites have been identified and metabolism is described as
    extensive in rat. The argument therefore does not obviously transfer, and
    the two chlorophacinone reports that used phenobarbital are uncontrolled
    single patients. Recorded as an open interpretation rather than settled
    either way, because the safety objection about sedating a bleeding patient
    stands regardless of the metabolism question.
  evidence:
  - reference: PMID:30689138
    reference_title: "Should Cytochrome P450 Inducers be Used to Accelerate Clearance of Brodifacoum from Poisoned Patients?"
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: OTHER
    snippet: "Therefore, we propose that CYP inducers should not be used to accelerate the clearance of brodifacoum from poisoned patients, but that alternative approaches such as reducing enterohepatic recirculation of brodifacoum, or using lipid emulsions to scavenge brodifacoum throughout the body, be considered."
    explanation: >-
      States the position being weighed, in full: the authors do not simply
      reject enzyme induction, they redirect to interrupting enterohepatic
      recirculation or scavenging the drug. Marked indirect because it is a
      proposal about brodifacoum, not chlorophacinone.
  - reference: PMID:30689138
    reference_title: "Should Cytochrome P450 Inducers be Used to Accelerate Clearance of Brodifacoum from Poisoned Patients?"
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: OTHER
    snippet: "unlike warfarin, brodifacoum does not undergo significant metabolism in the liver, nor have the effects of phenobarbital on vitamin K1 metabolism been previously determined"
    explanation: >-
      Gives the premise on which that position rests, which is the premise that
      may not hold for chlorophacinone. Marked indirect for the same reason.
  - reference: PMID:23109180
    reference_title: "Bioaccumulation of chlorophacinone in strains of rats resistant to anticoagulants."
    supports: SUPPORT
    directness: INDIRECT
    evidence_source: MODEL_ORGANISM
    snippet: "Extensive metabolism of chlorophacinone was also found, and was similar (in nature and proportion of metabolites) across strains (3 OH-metabolites identified)."
    explanation: >-
      Chlorophacinone, unlike brodifacoum, is extensively metabolised, which is
      why the argument may not transfer. Marked indirect because the work is in
      rat.
references:
- reference: PMID:16499407
  title: "Anticoagulant rodenticides."
- reference: PMID:26239439
  title: "Long-Acting Anticoagulant Rodenticide (Superwarfarin) Poisoning: A Review of Its Historical Development, Epidemiology, and Clinical Management."
- reference: PMID:10216974
  title: "Toxicological management of chlorophacinone poisoning."
- reference: PMID:2769823
  title: "Chlorophacinone intoxication. A biological and toxicological study."
- reference: PMID:3222685
  title: "[Prolonged anticoagulation following chlorophacinone poisoning]."
- reference: PMID:16716547
  title: "Lethal paradoxical cerebral vein thrombosis due to suspicious anticoagulant rodenticide intoxication with chlorophacinone."
- reference: PMID:35000500
  title: "Acute hemorrhage and death in calves following chlorophacinone exposure."
- reference: PMID:40974629
  title: "A retrospective analysis of 88 anticoagulant rodenticide poisoning cases: Characteristics and forensic implications."
- reference: PMID:24781908
  title: "[Rodenticide resistance and consequences]."
- reference: PMID:35970209
  title: "VKORC1 single nucleotide polymorphisms in rodents in Spain."
- reference: PMID:21171851
  title: "Prevalence of anticoagulant rodenticide poisoning in humans and animals in France and substances involved."
- reference: PMID:39893780
  title: "Simultaneous quantification of eighteen therapeutic oral anticoagulants, rodenticides, and antiplatelet agents by LC-MS/MS and its application in post-mortem forensic cases."
- reference: PMID:31857739
  title: "Superwarfarin (Long-Acting Anticoagulant Rodenticides) Poisoning: from Pathophysiology to Laboratory-Guided Clinical Management."
- reference: PMID:17357377
  title: "Long-acting anticoagulant rodenticide poisoning: an evidence-based consensus guideline for out-of-hospital management."
- reference: PMID:2729812
  title: "[Prolonged hypocoagulability following the ingestion of anticoagulant raticides]."
- reference: PMID:1522713
  title: "Rapid high-performance liquid chromatographic assay of chlorophacinone in human serum."
- reference: PMID:23109180
  title: "Bioaccumulation of chlorophacinone in strains of rats resistant to anticoagulants."
- reference: PMID:30689138
  title: "Should Cytochrome P450 Inducers be Used to Accelerate Clearance of Brodifacoum from Poisoned Patients?"
- reference: PMID:32447894
  title: "[A case of acute osteofascial compartment syndrome caused by rodenticide poisoning]."
- reference: PMID:27773686
  title: "Differential modulation of FXR activity by chlorophacinone and ivermectin analogs."
- reference: PMID:17037620
  title: "Chlorophacinone exposure causing an epizootic of acute fatal hemorrhage in lambs."
- reference: PMID:32645465
  title: "Accidental chlorophacinone exposure of lactating ewes: Clinical follow-up and human health dietary implications."
- reference: PMID:29897553
  title: "The Bile Sequestrant Cholestyramine Increases Survival in a Rabbit Model of Brodifacoum Poisoning."
📚

References & Deep Research

References

23
Anticoagulant rodenticides.
No top-level findings curated for this source.
Long-Acting Anticoagulant Rodenticide (Superwarfarin) Poisoning: A Review of Its Historical Development, Epidemiology, and Clinical Management.
No top-level findings curated for this source.
Toxicological management of chlorophacinone poisoning.
No top-level findings curated for this source.
Chlorophacinone intoxication. A biological and toxicological study.
No top-level findings curated for this source.
[Prolonged anticoagulation following chlorophacinone poisoning].
No top-level findings curated for this source.
Lethal paradoxical cerebral vein thrombosis due to suspicious anticoagulant rodenticide intoxication with chlorophacinone.
No top-level findings curated for this source.
Acute hemorrhage and death in calves following chlorophacinone exposure.
No top-level findings curated for this source.
A retrospective analysis of 88 anticoagulant rodenticide poisoning cases: Characteristics and forensic implications.
No top-level findings curated for this source.
[Rodenticide resistance and consequences].
No top-level findings curated for this source.
VKORC1 single nucleotide polymorphisms in rodents in Spain.
No top-level findings curated for this source.
Prevalence of anticoagulant rodenticide poisoning in humans and animals in France and substances involved.
No top-level findings curated for this source.
Simultaneous quantification of eighteen therapeutic oral anticoagulants, rodenticides, and antiplatelet agents by LC-MS/MS and its application in post-mortem forensic cases.
No top-level findings curated for this source.
Superwarfarin (Long-Acting Anticoagulant Rodenticides) Poisoning: from Pathophysiology to Laboratory-Guided Clinical Management.
No top-level findings curated for this source.
Long-acting anticoagulant rodenticide poisoning: an evidence-based consensus guideline for out-of-hospital management.
No top-level findings curated for this source.
[Prolonged hypocoagulability following the ingestion of anticoagulant raticides].
No top-level findings curated for this source.
Rapid high-performance liquid chromatographic assay of chlorophacinone in human serum.
No top-level findings curated for this source.
Bioaccumulation of chlorophacinone in strains of rats resistant to anticoagulants.
No top-level findings curated for this source.
Should Cytochrome P450 Inducers be Used to Accelerate Clearance of Brodifacoum from Poisoned Patients?
No top-level findings curated for this source.
[A case of acute osteofascial compartment syndrome caused by rodenticide poisoning].
No top-level findings curated for this source.
Differential modulation of FXR activity by chlorophacinone and ivermectin analogs.
No top-level findings curated for this source.
Chlorophacinone exposure causing an epizootic of acute fatal hemorrhage in lambs.
No top-level findings curated for this source.
Accidental chlorophacinone exposure of lactating ewes: Clinical follow-up and human health dietary implications.
No top-level findings curated for this source.
The Bile Sequestrant Cholestyramine Increases Survival in a Rabbit Model of Brodifacoum Poisoning.
No top-level findings curated for this source.

Deep Research

1

Deep research results are used as seeds for research; they do not undergo the same validation as the main records and may contain errors. How we use deep research.

Evaluations and curation notes (1)

Create: Chlorophacinone Poisoning · 2026-09-03T18:51:47Z · View source

Created kb/disorders/Chlorophacinone_Poisoning.yaml de novo. Chlorophacinone is an indanedione anticoagulant rodenticide; the entry models the acquired vitamin K-antagonist coagulopathy it causes. No MONDO term exists. MONDO was searched live through OLS4 for chlorophacinone, indandione, anticoagulant rodenticide and rodenticide poisoning, and the 60 hierarchical children of MONDO:0029000 (poisoning) were enumerated; none covers rodenticides or anticoagulants. The entry therefore carries no primary disease_term and records only a skos:broadMatch to MONDO:0029000, with the reasoning in the entry notes. A new MONDO term request is the correct follow-up. Deep research. The user asked for Edison falcon. The falcon provider could not run: EDISON_API_KEY from .env is rejected with HTTP 403 Forbidden at https://api.platform.edisonscientific.com/auth/login (edison_client raises "Failed to authenticate"). The key is well formed, 235 characters, unquoted, no whitespace, so this is a server-side credential rejection and not a local configuration fault. Two attempts were made. Deep research was therefore run with the claude_code provider instead, producing research/Chlorophacinone_Poisoning-deep-research-claude_code.md (798 s, 16 web searches, 58 turns). Report validation, per the skill's Step 3a. The report's own frontmatter records needs_review: true, 48 references checked, 47 resolved, 1 unresolved (PMID:34748846), confabulation_rate 0.021, 31 of 47 on topic, 0 off topic; term validation 45/45 resolved. PMID:34748846 is NOT cited anywhere in this entry. The six terms the validator lists as "named as a different term" are a report formatting artifact: the report wrote the string "not verified this session" in the label column rather than a wrong label. HP:0000132 (Menorrhagia) and HP:0001903 (Anemia) are used here and both were independently confirmed against the local HPO adapter. NEC check. just preflight-dr cannot run without a MONDO ID. The manual substitute was a gene- and agent-frequency count over the report body: 124 mentions of chlorophacinone against 16 brodifacoum, 15 bromadiolone, 29 warfarin (mostly as the comparator), and 25 VKORC1. The report is about the intended entity. Curated content. Nine pathophysiology nodes forming a connected chain from systemic exposure through VKORC1 inhibition, reduced-vitamin-K depletion, failed gamma-carboxylation, functional factor II/VII/IX/X deficiency, prolonged coagulopathy and multicompartment haemorrhage to hypovolaemic shock and death, with hepatic accumulation and prolonged elimination as a parallel branch feeding the coagulopathy node. 19 phenotypes, 2 biochemical markers, 1 environmental exposure (ECTO:9002177) linked into the pathograph, 3 treatments, 3 diagnosis entries, 3 progression phases, 3 epidemiology entries, 5 differential diagnoses, 2 animal models, 5 discussions, 109 evidence items over 22 references. Connectivity was checked programmatically: no pathophysiology node lacks an incoming edge, and every downstream, influences_mechanisms, target_mechanisms, modeled_mechanisms, readout and attaches_to target resolves. Evidence discipline. Every snippet was pre-verified against the local references_cache before being written into YAML, using a whitespace-normalizing substring check, so no blocked write or re-emission was needed. Every reference_title was extracted programmatically from the cache title: line and re-checked against the cache after all edits; all 22 match, and the set of cited PMIDs equals the set listed in the top-level references block. Class-level evidence and the directness slot. Most of the anticoagulant rodenticide literature reports the class rather than chlorophacinone. Note that the schema no longer accepts supports: PARTIAL, which CLAUDE.md still documents; supports is direction only and directness carries the inference step. One rule was applied to every one of the 109 items and no item is left untagged: INDIRECT where the quoted sentence is about the class rather than chlorophacinone, or comes from a non-human system, or is a therapeutic recommendation used as mechanism evidence; DIRECT where the sentence names chlorophacinone or the specific case and asserts the claim. That yields 75 INDIRECT and 34 DIRECT. For evidence_source in reviews and guidelines the rule is OTHER for pharmacological assertions and management recommendations, HUMAN_CLINICAL for aggregated patient observations. An automated audit confirms no snippet carries two different tag combinations anywhere in the file. Adversarial self-review before the PR. A subagent review against the dismech-pr-review skill returned five blocking and six high findings; all were acted on. The frequency: FREQUENT band on Hematuria was removed, since 39 of 88 comes from a case-report synthesis enriched for severe outcomes and the entry's own epidemiology records about 2 per cent morbidity across reported exposures; the sources support a rank, not a rate. The directness and evidence_source inconsistencies described above were the review's other two blocking findings and were fixed by the whole-file retag. Two chlorophacinone-specific papers already in this branch's cache but uncited were brought in: PMID:1522713, twenty poisoned patients and the only source giving a serum concentration below which bleeding risk has resolved, and PMID:23109180, which identifies three hydroxy-metabolites in rat and reports a hepatic plateau suggesting rapid elimination, both of which bear directly on the persistence discussion and one of which cuts against it. Also added on review: the lamb epizootic (PMID:17037620) as a second animal model, three missing differentials (warfarin/coumarin, liver failure, disseminated intravascular coagulation), the consensus out-of-hospital guideline (PMID:17357377), the Paris series recommendation to recheck the prothrombin time 48 hours after stopping vitamin K (PMID:2729812), coma and acute compartment syndrome as phenotypes, milk transfer as an exposure route, and an INTERPRETATION discussion on whether the published argument against CYP inducers, which rests on brodifacoum not being metabolised, transfers to a compound that is. The 39893780 snippet was swapped from an aims sentence to the paper's validation result, and the 16716547 snippet from an "the authors discuss" sentence to the one reporting the case; the thrombosis discussion no longer says the death was attributed to chlorophacinone, since that paper calls the diagnosis suspicious and problematic. The factor VII half-life ordering is retained but now carries a note saying it is standard coagulation physiology not demonstrated in any cited source. Curation-process narrative was trimmed out of the rendered notes fields and lives here instead. Post-review round on PR #10782. The ai4c-reviewer approved with no critical or important findings and three optional suggestions; all three were acted on. The frequency-band cleanup had landed on the wrong occurrence of a snippet that appears on two blocks, so the corrected wording sat on the Multicompartment Hemorrhage node while the Hematuria phenotype kept prose still arguing for the removed FREQUENT band. Both explanations were rewritten to speak to their own block. NCIT:C208347 (Four-factor Prothrombin Complex Concentrate) was bound as therapeutic_agent on the factor-replacement treatment, with a note recording that recombinant activated factor VII and fresh frozen plasma are named in the same recommendation and are deliberately left unbound because no suitable term was resolved. PMID:29897553 (cholestyramine in a rabbit brodifacoum model), already cited in prose on the hepatic-accumulation node, was added to the top-level references block. Activated charcoal and antifibrinolytics were NOT curated: the reviewer independently confirmed that both appear only in PMID:16499407's MeSH keywords and never in its abstract body, so no exact-quote snippet exists for either. Deliberate omissions, recorded in the entry notes so they are not re-attempted. HP:4000177 (Bleeding ameliorated by vitamin K) fits this disorder but descends from HP:0012823 Clinical modifier rather than HP:0000118, so it is outside the PhenotypeTerm dynamic enum; it was tried and removed. HP:0045063 (Increased PIVKA-II) is mechanistically apt but no cited source here reports PIVKA-II measurement in chlorophacinone poisoning, and the PIVKA-antigen clause that had been asserted in a node description was removed for the same reason. No datasets block: no omics or perturbation dataset for chlorophacinone exposure was found, only wildlife and livestock residue chemistry, which measures the compound rather than a host response. A VKORC1 or CYP2C9 pharmacogenomic susceptibility claim was NOT curated; it is mechanistically plausible but every available citation is a warfarin study. An unevidenced claim that vitamin K1 works by way of a warfarin-insensitive quinone reductase was written into a treatment description and then removed, because nothing cited here states it. The class-level clauses about greater VKOR affinity are explicitly not carried over onto the chlorophacinone node, because the same entry records that rodent-efficacy sources call it first-generation, which is a lower-potency claim. Discussions. Two knowledge gaps: whether loss of the vitamin K-dependent anticoagulants protein C and protein S explains the reported paradoxical thrombosis, and why hypocoagulability persists after plasma chlorophacinone falls. Two interpretation entries: chlorophacinone is called first-generation by rodent-efficacy sources and long-acting by human-toxicology sources, with the verbatim quote for each, because the first-generation label wrongly implies a warfarin-length treatment course; and whether the anti-CYP-inducer argument transfers. One knowledge gap on the widely repeated claim that indandiones uncouple oxidative phosphorylation, for which PubMed queries pairing chlorophacinone, indandione, diphacinone and pindone with uncoupling, mitochondria and oxidative phosphorylation returned no records; it carries the FXR-antagonism paper (PMID:27773686) so the entry is not read as claiming chlorophacinone has no off-target activity at all. Validation actually run and read. just validate (schema, terms, references) and just validate-disorders, the batched form CI runs: schema clean, terms passed, 109/109 snippets verified against cached references. just check-duplicate-keys, just check-entity-refs (2832 files), just check-title-snippets, just check-folded-hyphens: all pass. just compliance: 96.6% global, 97.0% weighted. Term validation genuinely consulted the ontologies, confirmed by new rows appearing in cache/chebi, cache/ecto, cache/go and cache/hgnc terms.csv and in four cache/enums membership files. uv run pytest tests/test_data.py against the final file state: 47829 passed.

Claude Code ▸
Chlorophacinone Poisoning: Research Report
claude-haiku-4-5-20251001, claude-opus-5 15 citations 2026-09-03T14:35:00.004451

Chlorophacinone Poisoning: Research Report

Prepared: 2026-09-03. Target entry: kb/disorders/Chlorophacinone_Poisoning.yaml (currently an 18-line stub). Category: Environmental.

A note before the content. The human literature on chlorophacinone specifically is thin. PubMed returns 109 records for the term overall, and most are ecotoxicology, analytical chemistry, or rodent-resistance work. The number of published human chlorophacinone cases with individual clinical detail is in the single digits. Nearly every strong clinical statement below therefore comes from the anticoagulant rodenticide class literature, where brodifacoum and bromadiolone dominate the case material. I have marked class-level inference wherever it occurs. Do not let a class citation become a chlorophacinone claim in the entry.


1. Disease Information

Overview

Chlorophacinone poisoning is an acquired, toxin-induced coagulopathy. Chlorophacinone is an indanedione anticoagulant rodenticide. It inhibits vitamin K epoxide reductase in the hepatocyte, which halts regeneration of reduced vitamin K, which halts gamma-carboxylation of coagulation factors II, VII, IX and X. The clinical result is a functional deficiency of those factors and a bleeding diathesis. Onset is delayed by days. Duration is measured in weeks.

The compound was introduced in the mid-1960s by Lipha SA of France. It is used against rats, mice, voles and prairie dogs, in bait and as a tracking powder.

Chemical identity

Field Value Source
Name chlorophacinone
Systematic 2-[(4-chlorophenyl)(phenyl)acetyl]-1H-indene-1,3(2H)-dione
CAS 3691-35-8 NPIC / EPA
Formula C23H15ClO3 PubChem CID 19402
MW 374.8 g/mol (some sources give 364.8; see caveat)
CHEBI CHEBI:81796 (label: chlorophacinone) OLS4, verified
PubChem CID 19402 verified

Caveat on molecular weight. One search result reported 364.8 for C23H15ClO3. The formula computes to roughly 374.8. Verify against PubChem directly before curating a number. I did not resolve this; the PubChem page did not render through the fetch tool.

Disease identifiers

There is no MONDO term for chlorophacinone poisoning, and none for anticoagulant rodenticide poisoning. I searched MONDO through OLS4 for rodenticide poisoning, poisoning by rodenticide, and poisoning. The third returned 32 terms. None covers rodenticides, coumarins, warfarin, or anticoagulants.

Resource Value Status
MONDO MONDO:0029000 poisoning Only available anchor. A skos:broadMatch at best. A new MONDO term request is the correct move.
ICD-10-CM T60.4X- Toxic effect of rodenticides Not independently verified against the ICD browser this session
ICD-11 NE61 (toxic effect of pesticides) family Not verified
MeSH Rodenticides (D012377), Indans, Anticoagulants, Vitamin K 1. Cached PubMed records for chlorophacinone cases index under Indans/blood, poisoning and Rodenticides/poisoning Verified in references_cache/PMID_10216974.md
OMIM Not applicable. Not a genetic disease.
Orphanet No ORPHA term found for this concept

Because ICD-10-CM T60.4 is not specific to chlorophacinone, electronic health record case-finding cannot separate this entity from brodifacoum, bromadiolone or bromethalin exposure without a toxicology result. That is a real constraint on any EHR-derived phenotype algorithm.

Synonyms

  • chlorophacinone intoxication
  • chlorophacinone toxicosis (veterinary usage)
  • indandione anticoagulant rodenticide poisoning
  • Rozol poisoning, Caid poisoning, Liphadione, Raviac, Ramucide, Drat, Topitox (trade names; Rozol and Caid are the ones that appear in the literature)
  • Sometimes grouped under "superwarfarin poisoning", though see the classification note below.

A classification conflict worth recording

Chlorophacinone is repeatedly described as a first-generation anticoagulant, and equally repeatedly grouped with the long-acting anticoagulant rodenticides / superwarfarins. Both usages appear in authoritative sources. Watt et al. put it squarely in the long-acting group (PMID:16499407, verbatim): "This group includes the second generation 4-hydroxycoumarins brodifacoum, bromadiolone, difenacoum, flocoumafen and the indanedione derivatives chlorophacinone and diphacinone." Meanwhile EPA and pest-control sources call it a first-generation multiple-feed anticoagulant, and Esther et al. list it with warfarin and coumatetralyl as first-generation (PMID:24781908, verbatim): "Anticoagulants of the first generation (warfarin, chlorophacinone, coumatetralyl) as well as bromadiolone and difenacoum are not an option for the control of resistant Norway rats."

The conflict is real, not an error in one source. "Generation" is a rodent-efficacy term. "Long-acting" is a human-toxicology term. Chlorophacinone is first-generation by rodent potency and long-acting by human duration of effect. Curate that distinction explicitly, because it changes clinical expectation.

Data provenance

Aggregated, not per-patient. Poison-center registries (America's Poison Centers NPDS, French PCC data in PMID:21171851), forensic case series (PMID:40974629), and individual published case reports. No disease registry exists. No EHR cohort study specific to chlorophacinone was found.


2. Etiology

Causal factor

A single environmental cause: ingestion, and less often inhalation or dermal absorption, of chlorophacinone. The compound is the sufficient cause. There is no genetic disease here.

King and Tran, on routes (PMID:26239439, verbatim): "Inhalational, transcutaneous, and oral routes of exposure have been documented. Most exposures are unintentional."

Documented exposure circumstances:

  1. Unintentional pediatric ingestion of bait. The dominant scenario by count. Almost always small amounts.
  2. Deliberate self-poisoning. The scenario that produces severe published cases. Lagrange et al. describe a 33-year-old man who ingested 1875 mg (PMID:10216974). Vogel et al. describe an 18-year-old who ingested about 100 mg (PMID:3222685).
  3. Occupational exposure. Reported for the class (PMID:16499407).
  4. Homicidal or covert administration. Two homicides among 88 anticoagulant rodenticide cases (PMID:40974629). The 2007 chlorophacinone fatality was investigated as suspicious (PMID:16716547).
  5. Contaminated food chain. Chlorophacinone transfers into sheep milk (PMID:32645465). A human dietary route exists in principle.
  6. Environmental / secondary, in animals. Predators and scavengers eating poisoned rodents.

Ecological terms (ECTO) for these routes were not searched this session. exposure to rodenticide and exposure to chemical via ingestion are the shapes to look for. Bind nothing you have not resolved.

Risk factors

Environmental and behavioral. Age under 6 years is the leading risk factor for exposure by count. King and Tran report that across 25 years of US poison-center data "there were 315951 exposures reported with nearly 90% among children" (PMID:26239439, verbatim). Berny et al. found French exposures "mostly occurred in young children, with no or very limited clinical severity" and that circumstances were "predominantly accidental in man (77%)" (PMID:21171851, verbatim).

Other environmental risk factors: agricultural and rural residence where field use is permitted, occupational pest control, psychiatric illness and suicidality, and access to stored bait. The lamb and calf epizootics both trace to old or spilled bait left accessible (PMID:17037620, PMID:35000500).

Host factors, likely but not demonstrated for chlorophacinone. Pre-existing liver disease, baseline vitamin K deficiency, malabsorption, concurrent warfarin or direct oral anticoagulant therapy, antibiotic-induced gut flora suppression, and low dietary vitamin K intake should all amplify the coagulopathy. I found no study testing any of these against chlorophacinone. Curate them as inference or not at all.

Genetic risk factors in humans. None established. This is a place where a plausible story could be curated into the entry incorrectly, so state the reasoning. Human VKORC1 (hgnc:23663) promoter variant -1639G>A (rs9923231) and CYP2C9 (hgnc:2623, not verified this session) star alleles govern warfarin dose requirement. It is mechanistically reasonable that VKORC1 haplotype modulates sensitivity to chlorophacinone, since the drug target is the same enzyme. I found no study demonstrating this. Do not curate a VKORC1 pharmacogenomic risk claim for chlorophacinone with a warfarin citation. That is the Named Entity Confusion failure in a different coat.

Note also that chlorophacinone is not known to be a CYP2C9 substrate in the way warfarin is, so the CYP2C9 analogy is weaker still.

Genetic factors in rodents, which are real and well documented. These are resistance, not human risk, and belong in the entry as target-species biology. See §4 and §14.

Protective factors

  • Adequate vitamin K1 status. Directly protective and the basis of therapy.
  • Formulation dilution. Baits carry 0.005 percent to 0.25 percent active ingredient, so an accidental mouthful delivers a trivial dose. This is why 90 percent of exposures are children and 98 percent are benign.
  • No genetic protective factor is known in humans.

King and Tran on outcome (PMID:26239439, verbatim): "Fortunately, only 2% of all exposures result in morbidity or mortality."

Gene-environment interaction

In humans: not demonstrated. In target and non-target rodents: the central story of the field. Vkorc1 coding variants reduce chlorophacinone binding and produce survival on lethal bait. Bermejo-Nogales et al. (PMID:35970209, verbatim): "Computational analysis of binding predictions found out that the brown rat S149I mutation predicted a high reduction of the binding affinity of chlorophacinone and brodifacoum ARs." That evidence is COMPUTATIONAL in the docking part and MODEL_ORGANISM in the sequencing part. Split the evidence items.


3. Phenotypes

The phenotype is a bleeding diathesis with a latent period. Category assignments below follow the dismech convention (Clinical, Laboratory).

Frequency data

The best available frequency data is class-level, from the 88-case forensic synthesis (PMID:40974629). Verbatim: "Multi-organ hemorrhage was the predominant clinical manifestation, with hematuria being the most frequently reported symptom (n = 39)." That is 39 of 88, roughly 44 percent, in a series enriched for severe and fatal cases. It is not a population frequency and must not be curated as one. measure_type reasoning applies: this is a case-series proportion in a selected sample.

Clinical phenotypes

Phenotype HPO term ID Notes
Hematuria Hematuria HP:0000790 Most frequently reported bleeding site in the class series (PMID:40974629, PMID:26239439). Documented in the fatal chlorophacinone case (PMID:16716547, MeSH Hematuria/chemically induced)
Epistaxis Epistaxis HP:0000421 Listed by Watt et al.; the presenting sign in the lamb epizootic
Gingival bleeding Gingival bleeding HP:0000225 Watt et al.
Bruising / ecchymoses Subcutaneous hemorrhage HP:0001933 "widespread bruising" (PMID:16499407)
Gastrointestinal hemorrhage Gastrointestinal hemorrhage HP:0002239
Rectal bleeding Hematochezia HP:0002573
Intracranial hemorrhage Intracranial hemorrhage HP:0002170 The leading cause of death. Verbatim (PMID:26239439): "Deaths were most commonly associated with intracranial hemorrhage."
Subarachnoid hemorrhage Subarachnoid hemorrhage HP:0002138 Documented in the fatal chlorophacinone case (PMID:16716547)
Menorrhagia Menorrhagia HP:0000132 (not verified this session)
Hematoma Internal hemorrhage HP:0011029 Use for haemorrhage into internal organs
Anemia Anemia HP:0001903 (not verified this session) "anaemia may result" (PMID:16499407)
Abnormal bleeding, general Abnormal bleeding HP:0001892 Parent term
Bleeding responsive to vitamin K Bleeding ameliorated by vitamin K HP:4000177 A genuinely apt term. It exists. Verified in OLS4.
Flank pain (search HP for flank pain; not verified) "haematuria with flank pain" (PMID:16499407)
Coma Coma HP:0001259 (not verified) Terminal. MeSH Coma/chemically induced on PMID:16716547
Hypovolemic shock (not verified) "Severe blood loss may result in hypovolaemic shock, coma and death" (PMID:16499407)
Cerebral venous thrombosis Cerebral venous thrombosis (not verified) The paradoxical presentation. See below.

Laboratory phenotypes

Finding HPO term ID Data
Prolonged prothrombin time Prolonged prothrombin time HP:0008151 Median PT 100 s (range 11.6 to 300) in 88 cases (PMID:40974629)
Prolonged aPTT Prolonged partial thromboplastin time HP:0003645 Median aPTT 110 s (range 3.71 to 212) (PMID:40974629)
Elevated INR (no clean HP term; use HP:0008151) Median INR 9, range 0.98 to 38.2 (PMID:40974629)
Increased PIVKA-II Increased PIVKA-II HP:0045063 Under-used. Mechanistically the most specific marker available.
Reduced factor X activity Reduced factor X activity HP:0008321 Vogel et al. tracked factors VII and X (PMID:3222685)

Verbatim on the coagulation panel (PMID:40974629): "Coagulation function tests revealed average values of aPTT, PT, and INR of aPTT: 110 (3.71 ∼ 212) s, PT: 100 (11.6 ∼ 300) s and INR: 9 (0.98 ∼ 38.2), respectively, all significantly exceeding normal ranges." Note that snippet is list-shaped, carries three separate measurements, and would support three distinct claims. Split it if you use it more than once, and check what each node actually consumes.

King and Tran, verbatim: "Most patients present with coagulation assay values beyond measurable limits."

The paradoxical thrombosis phenotype

A patient anticoagulated by a vitamin K antagonist can thrombose. Protein C and protein S are also vitamin K dependent and have shorter half-lives than factors II, IX and X, so early in the exposure the anticoagulant pathway falls before the procoagulant pathway does. That mechanism is standard for warfarin-induced skin necrosis. Papin et al. report the chlorophacinone instance, and their title states the finding: "Lethal paradoxical cerebral vein thrombosis due to suspicious anticoagulant rodenticide intoxication with chlorophacinone" (PMID:16716547). The abstract itself is short and does not state the protein C mechanism. Verbatim, all it says is: "They review the literature and discuss particularities of anticoagulant rodenticide intoxication, as well as the apparent contradiction between anticoagulant intoxication and lethal thrombosis."

That abstract cannot carry a protein C claim. King and Tran independently confirm the phenomenon at class level, verbatim: "Long-acting anticoagulant rodenticide-induced paradoxical thrombosis and thrombotic complications accompanying hemostatic therapy have also been observed." Use that for the phenomenon and find a separate source for the protein C explanation, or mark it inferred.

Phenotype characteristics

  • Onset. Adult and pediatric both, entirely determined by exposure. Not age-linked.
  • Latency. Verbatim (PMID:40974629): "The median latency period was 4 days (range: 1 ∼ 30)." Watt et al., verbatim: "The first clinical signs of bleeding may be delayed and patients may remain anticoagulated for several days (warfarin) or days, weeks or months (long-acting anticoagulants) after ingestion of large amounts."
  • Severity. Bimodal. Trivial in accidental pediatric ingestion. Severe to fatal in deliberate large ingestion.
  • Progression. Episodic and relapsing during treatment. This is the signature. Vogel et al., verbatim: "Under high dose vitamin K therapy the Quick was rapidly corrected but fell again on each vitamin K withdrawal." Rebound is the expected course, not a complication.
  • Duration. Verbatim (PMID:3222685): "Prothrombin time (and vitamin K dependent factors VII and X) finally normalized only 7 weeks after chlorophacinone ingestion."

Quality of life

No EQ-5D, SF-36 or PROMIS data exists for this condition. Not measured. The functional burden is dominated by prolonged hospitalization, months of daily vitamin K, and repeated coagulation monitoring. Treatment courses in the class averaged 168 days (PMID:26239439). That figure is class-level and driven by brodifacoum. Chlorophacinone courses are shorter. Do not transfer it.


4. Genetic / Molecular Information

No causal human gene. This is an acquired toxic condition. The genetics in this entry are of three other kinds.

The molecular target

VKORC1, vitamin K epoxide reductase complex subunit 1. HGNC hgnc:23663, verified in use at kb/disorders/Vitamin_K_Dependent_Coagulation_Factor_Deficiency.yaml:181. Enzyme activity term: GO:0047057 vitamin-K-epoxide reductase (warfarin-sensitive) activity (verified via OLS4). The warfarin-insensitive paralog activity is GO:0047058, corresponding to VKORC1L1.

The downstream carboxylase is GGCX, gamma-glutamyl carboxylase, HGNC hgnc:4247, likewise already bound in the sibling entry. Its process term is GO:0017187 peptidyl-glutamic acid carboxylation.

Germline human disease at the same locus, for differential purposes

Biallelic VKORC1 variants cause vitamin K-dependent coagulation factor deficiency type 2, and biallelic GGCX variants cause type 1. That entry already exists in this knowledge base as Vitamin_K_Dependent_Coagulation_Factor_Deficiency. It is the key genetic differential for an unexplained multi-factor deficiency, and it should be cross-linked. Distinct VKORC1 missense variants cause hereditary warfarin resistance.

Rodent resistance genetics

This is the substantive genetic content of the topic.

Esther et al. (PMID:24781908, verbatim): "Polymorphisms in the vitamin K epoxide reductase complex subunit 1 (VKORC1) gene and respective substitutions of amino acids in the VKOR enzyme are the major cause for rodenticide resistance. Resistant Norway rats in Germany are characterized by the Tyr139Cys genotype, which is spread throughout the northwest of the country."

Bermejo-Nogales et al. (PMID:35970209, verbatim): "We identified genotypic vkorc1 variations corresponding to amino acid changes at the VKORC1 protein at the S149I - S149T and the E155K - E155Q mutations, depending on the rodent species."

Known resistance substitutions relevant to chlorophacinone:

Species Variant Effect on chlorophacinone Evidence class
Rattus norvegicus Tyr139Cys Resistance; chlorophacinone not recommended MODEL_ORGANISM (PMID:24781908)
Rattus norvegicus Ser149Ile Predicted large reduction in chlorophacinone binding affinity COMPUTATIONAL (PMID:35970209)
Rattus rattus Ser149Thr, Glu155Lys, Glu155Gln Slight reduction for bromadiolone; chlorophacinone not the reported target COMPUTATIONAL (PMID:35970209)
Mus musculus Tyr139Cys, Leu128Ser, spretus-type quadruple (Arg12Trp/Ala26Ser/Ala48Thr/Arg61Leu) Resistance MODEL_ORGANISM (PMID:24781908)

There is direct in-vivo dose-response work on Y139C house mice (PMID:36181415, Pest Manag Sci, 2022): "Anticoagulant rodenticide blood-clotting dose-responses and resistance factors for Tyrosine139Cysteine (Y139C) heterozygous- and homozygous-resistant house mice (Mus musculus)". I did not retrieve its abstract. Fetch it before citing a resistance factor number.

Variant classification, allele frequency, somatic origin, epigenetics, chromosomal abnormalities

Not applicable. No ClinVar entries. No gnomAD frequencies relevant. No somatic component. No epigenetic mechanism reported. No chromosomal abnormality.


5. Environmental Information

Chlorophacinone is the environmental factor. Everything in this section is exposure characterization.

Formulation and use. Grain-based ready-to-use baits at 0.005 to 0.25 percent active ingredient, plus tracking powder. Rozol Prairie Dog Bait, used in the raptor study, is 0.005 percent (PMID:35633457, verbatim: "Rozol, 0.005% active ingredient chlorophacinone, CPN").

Persistence, and the fact that distinguishes chlorophacinone from the superwarfarins. Chlorophacinone is markedly less persistent in tissue than bromadiolone or brodifacoum. A 2021 stereochemistry study (PMID:33130091) reports bromadiolone with a hepatic half-life of roughly 10 to 30 days against chlorophacinone at roughly one day in voles. I have that only through a fetch summary, not from the verbatim abstract, so treat the quoted fragment as unverified until refetched. In black-tailed prairie dogs, peak liver residue reached 5.499 mg/kg at day 3 with an estimated half-life near 6 days (PMID:25997570). Same caveat: summary, not verified quote.

Milk transfer. Verbatim (PMID:32645465): "Chlorophacinone was detected in milk on day 2 post-exposure and remained quantifiable for at least 7 days in milk of these 11 ewes. Concentrations in milk were much lower than in plasma and decreased quickly (mean half-life of 2 days)." Their conclusion, verbatim: "consumption of dairy products derived from these ewes after a one-week withdrawal period would pose low risk to consumers."

Non-target environmental burden. Chlorophacinone appears in wild raptors and mammals. In south-eastern France over 12 years, first-generation compounds were the minority. Verbatim (PMID:34748846): "While SGARs were commonly detected (97.4% of positive samples), first-generation ARs were rarely found (7.7% of positive samples)." And the trend, verbatim: "While chlorophacinone exposure decreased over time, an increasing exposure trend was observed for the SGAR brodifacoum, suggesting that public policies may not be efficient at mitigating risk of exposure for non-target species."

Spain differs. In 401 non-target animals, granivorous birds showed the highest exposure prevalence, especially to chlorophacinone (PMID:22326314). That is from a fetch summary; refetch before quoting.

Lifestyle factors. None. Smoking, diet, alcohol and exercise have no established relation to this poisoning.

Infectious agents. Not applicable.


6. Mechanism / Pathophysiology

Ordered causal chain

  1. Chlorophacinone is ingested and absorbed from the gastrointestinal tract. This leads to a systemic chlorophacinone burden. Plasma concentrations after massive ingestion reach 27.6 mg/L (PMID:10216974).
  2. The systemic burden results in hepatic distribution and accumulation. The liver is the site of both the target enzyme and the substrate proteins. Hepatic accumulation is one of the four properties Watt et al. give for the long-acting group.
  3. Hepatic chlorophacinone binds and inhibits vitamin K epoxide reductase (VKORC1). Verbatim (PMID:16499407): "Anticoagulant rodenticides inhibit vitamin K(1)-2,3 epoxide reductase and thus the synthesis of vitamin K and subsequently clotting factors II, VII, IX and X."
  4. VKOR inhibition blocks regeneration of vitamin K hydroquinone from vitamin K 2,3-epoxide. The vitamin K cycle stalls. Verbatim (PMID:31857739): "resulting in the inability of the body to recycle vitamin K."
  5. Depletion of reduced vitamin K deprives gamma-glutamyl carboxylase of its obligate cofactor. This causes failure of gamma-carboxylation of glutamate residues on the Gla domains of the vitamin K-dependent proteins.
  6. Uncarboxylated factor precursors are secreted as PIVKA proteins. They are antigenically present and functionally inert. They cannot bind calcium, cannot dock to anionic phospholipid membranes, and cannot assemble into the tenase and prothrombinase complexes.
  7. Functional depletion proceeds in order of factor half-life. Factor VII goes first, at roughly 4 to 6 hours, then factor IX, then factor X, then prothrombin at roughly 60 to 72 hours. This ordering explains the delayed onset. It also explains why PT and INR move before aPTT.
  8. Branch, and it is the important one. Protein C and protein S are also vitamin K-dependent and also short-lived. Their earlier loss can produce a transient net procoagulant window, which leads to thrombosis rather than bleeding. This is the mechanism usually offered for the fatal cerebral vein thrombosis case (PMID:16716547). The half-life ordering step here is textbook coagulation physiology, inferred, not demonstrated in that paper. Mark it inferred.
  9. Combined deficiency of factors II, VII, IX and X results in failure of thrombin generation, which results in prolonged PT, prolonged aPTT and elevated INR.
  10. Impaired thrombin generation results in failure of hemostatic plug consolidation, which causes spontaneous and provoked hemorrhage across mucosal and visceral sites.
  11. Hemorrhage into a critical compartment causes death. Intracranially this is the commonest fatal route (PMID:26239439). Cumulative blood loss causes anemia and hypovolemic shock (PMID:16499407).
  12. Slow hepatic clearance and enterohepatic recirculation of chlorophacinone cause persistence of step 3, which produces the rebound coagulopathy on withdrawal of vitamin K (PMID:3222685).

A second, contested mechanism: mitochondrial uncoupling

Indandione anticoagulants are described in toxicology reference texts as uncouplers of oxidative phosphorylation, a property the 4-hydroxycoumarins lack. The claim is that this produces neurologic and cardiopulmonary injury in laboratory rats that can kill before hemorrhage does, and that it explains the direct capillary permeability damage sometimes attributed to indandiones.

I could not source this to primary literature. A PubMed query combining chlorophacinone with uncoupling OR mitochondria OR oxidative phosphorylation returned zero records. The same query for indandione OR diphacinone OR pindone with uncoupling returned zero records. The statement circulates in secondary sources and regulatory documents without a retrievable primary citation in the indexed literature.

Curate it as an open question or leave it out. Do not attach it to a PMID that does not say it. If it belongs anywhere, it belongs in a discussions entry with kind: KNOWLEDGE_GAP, stating that a mechanism widely repeated in reference texts has no locatable primary source. That is an honest, useful entry, and it is more valuable than a fabricated binding.

Ontology term suggestions for the pathograph

Node Term type Suggested binding Verified
Vitamin K epoxide reductase inhibition molecular function GO:0047057 vitamin-K-epoxide reductase (warfarin-sensitive) activity, modifier: DECREASED Yes, OLS4
Vitamin K cycle arrest biological process GO:0042373 vitamin K metabolic process, modifier: DECREASED Yes, in-repo use
Failure of Gla-domain carboxylation biological process GO:0017187 peptidyl-glutamic acid carboxylation, modifier: DECREASED Yes, in-repo use
Impaired thrombin generation / coagulopathy biological process GO:0007596 blood coagulation, modifier: DECREASED Yes, in-repo use
Cell type for all hepatic nodes cell type CL:0000182 hepatocyte Yes, in-repo use
Anatomical site of synthesis anatomy UBERON:0002107 liver Yes, OLS4
Chemical agent chemical CHEBI:81796 chlorophacinone Yes, OLS4
Vitamin K chemical CHEBI:28384 vitamin K; CHEBI:18067 phylloquinone for K1 Yes; phylloquinone in-repo use

biological_scale assignments, if used: VKOR inhibition is MOLECULAR. Failure of carboxylation is MOLECULAR. Hepatocyte secretion of inert PIVKA proteins is CELLULAR. Coagulopathy is ORGANISM. Site-specific hemorrhage is TISSUE.

Molecular profiling

None exists. No transcriptomic, proteomic, metabolomic, lipidomic, single-cell, spatial or CRISPR-screen dataset for chlorophacinone exposure was found. GEO holds nothing under this term to my knowledge; I did not run a GEO query. The one dataset resource located is an open dataset of anticoagulant rodenticide liver residues from Gran Canaria snakes and raptors (PMID:38260864, Data in Brief, 2024), which is residue chemistry rather than omics. Record the absence explicitly. A datasets: block here should be small and honest, and per repository policy would carry publication: and provenance notes rather than manufactured evidence snippets.


7. Anatomical Structures Affected

Primary organ. The liver, UBERON:0002107. It is the site of the lesion, not a site of injury. VKORC1 and GGCX both act in the hepatocyte endoplasmic reticulum. Note the distinction: the liver is where the mechanism happens; the liver is generally not damaged.

Exception. Hepatocellular necrosis was found in the poisoned lambs. Verbatim (PMID:17037620): "Histologically hepatocellular centrolobular necrosis was observed." Centrilobular necrosis in an exsanguinating animal is most parsimoniously hypoxic, secondary to shock, not a direct hepatotoxic effect. Do not curate chlorophacinone as a hepatotoxin on that sentence. And it is a MODEL_ORGANISM observation in any case.

Secondary organs, meaning bleeding sites. Effectively unrestricted. Watt et al., verbatim: "haemorrhage into any internal organ."

Sites documented in humans: nasal mucosa, gingiva, skin and subcutis, urinary tract, gastrointestinal tract, rectum, uterus, peritoneum (spontaneous haemoperitoneum is described), and brain, both subarachnoid and cerebral parenchymal.

Sites documented at necropsy in cattle (PMID:35000500, verbatim): "moderate-to-severe hemorrhage within various tissues and body cavities, including the thymus, subcutaneous region of the neck, mediastinum, lungs, pericardial sac, heart, spleen, perirenal fat, urinary bladder, and skeletal muscle, including the diaphragm." That is a list-shaped snippet covering eleven anatomical sites. If you use it, use it once, and only for a node that actually claims widespread multi-cavity hemorrhage.

Body systems. Hematologic (primary), cardiovascular, nervous, digestive, renal and urinary, respiratory, integumentary.

Cell types. hepatocyte CL:0000182 carries the mechanism. No cell is destroyed by the toxin. Platelets are unaffected; platelet count is characteristically normal, and that is a diagnostic discriminator.

Subcellular. The endoplasmic reticulum membrane. VKORC1 is an ER integral membrane protein and GGCX is ER-resident. GO cellular component endoplasmic reticulum membrane (GO:0005789, not verified this session).

Lateralization. Not applicable.


8. Temporal Development

Onset. Acute exposure. Clinically subacute presentation. No age predilection beyond exposure opportunity.

Latent period. Median 4 days, range 1 to 30 (PMID:40974629). The 33-year-old with a 1875 mg ingestion had "a normal prothrombin index (PI)" at 8 hours post-ingestion (PMID:10216974, verbatim). That single fact is the most clinically important thing in the entry: a normal coagulation panel early after ingestion excludes nothing.

Stages. A usable four-phase model, mapping to the progression: slot with phase as the key:

Phase Window State
Latent 0 to 24 hours Normal coagulation. Nausea and non-specific symptoms possible.
Coagulopathy onset 24 to 72 hours PT and INR rise. Factor VII falls first. Bleeding may begin.
Established hemorrhage 3 to 14 days Peak INR. Multi-site bleeding. Highest risk of intracranial hemorrhage.
Resolution with rebound weeks to months INR corrects under vitamin K and relapses on withdrawal. Full normalization at 7 weeks in the Vogel case (PMID:3222685).

Course. Fluctuating and relapsing under treatment. Not progressive. Not chronic once cleared.

Duration relative to the superwarfarins. Shorter, and this matters therapeutically. Chlorophacinone's apparent elimination half-life under phenobarbital was 3.27 days (PMID:10216974). Brodifacoum poisoning runs for months, with class treatment courses averaging 168 days (PMID:26239439). Chlorophacinone is long-acting relative to warfarin and short-acting relative to brodifacoum.

Dose-dependent kinetics. Verbatim (PMID:2769823): "The determination of half-lives was investigated and the results indicate that the greater the quantity absorbed, the longer the half-life." That is saturable, non-linear elimination, and it means half-life from a small exposure does not predict a large one.

A half-life conflict to resolve. One secondary source states a blood elimination half-life of 10 hours for chlorophacinone. The published human case data are incompatible with that as a governing figure, since the pharmacodynamic effect persists for weeks and the measured apparent half-life under enzyme induction was 3.27 days. The 10-hour figure may refer to a distribution phase or a different species. Do not curate it without a primary source.

Critical intervention windows. Two. - Within 1 to 2 hours of a large ingestion, activated charcoal is useful. - At 36 to 48 hours post-exposure, the INR check that decides everything. Verbatim (PMID:16499407): "In all other cases, the INR should be measured 36-48 hours post exposure. If the INR is normal at this time, even in the case of long-acting formulations, no further action is required."


9. Inheritance and Population

Inheritance. None. Acquired toxic exposure. No inheritance pattern, no penetrance, no expressivity, no anticipation, no mosaicism, no founder effect, no consanguinity relevance, no carrier frequency. Say so in the entry rather than leaving the section empty.

Epidemiology

There is no chlorophacinone-specific incidence or prevalence figure in the literature. What exists is class-level poison-center data.

Measure Value Population Source
Annual exposures, all long-acting anticoagulant rodenticides 10,413 mean per year United States PMID:26239439
Annual patients treated 2,750 mean per year United States PMID:26239439
Cumulative exposures over 25 years 315,951 United States PMID:26239439
Proportion in children nearly 90 percent United States PMID:26239439
Morbidity or mortality 2 percent of exposures United States PMID:26239439
Confirmed anticoagulant rodenticide poisonings, 2011 to 2013 117 East China PMID:30483606
Mortality in that series 1 of 117 East China PMID:30483606
Fatality in the pooled forensic series 6 of 88 Global case reports since 2000 PMID:40974629

Verbatim (PMID:26239439): "In the United States, on average, there were 10413 exposures reported with 2750 patients treated annually."

Chlorophacinone's share of that burden is small and declining, and the direction differs by country. In the east China series, chlorophacinone was not detected at all among 117 confirmed cases; bromadiolone accounted for 70.9 percent and brodifacoum 19.7 percent (PMID:30483606, via fetch summary). In the pooled 88-case forensic review, verbatim: "a total of 38 cases reported 7 distinct types, with brodifacoum and bromadiolone being the most common." Chlorophacinone is not named in that abstract.

In France, chlorophacinone matters more, because it is one of only two compounds registered for field use. Verbatim (PMID:21171851): "In wildlife, bromadiolone and chlorophacinone are by far the most important products, being the only ones registered for field use." And on human outcome there, verbatim: "There is no report of mortality in the human data, and less than 1% of all exposure cases in domestic animals were fatal."

Geography. Human chlorophacinone case reports cluster in France and Switzerland, which tracks the compound's registration history and market share. Livestock incidents are reported from the United States. Rodenticide poisoning in general is a much larger clinical problem in China and South Asia, but with different compounds.

Sex ratio. Not established for chlorophacinone. The 88-case series enumerated both sexes without reporting a ratio in the abstract. Note that male rats are reported more sensitive than females to chlorophacinone in EPA toxicology review, which is a target-species finding, not a human one.

Age distribution. Bimodal in the class. A large young-child peak that is clinically benign, and an adult peak of deliberate ingestion that carries the mortality.


10. Diagnostics

Laboratory tests

Coagulation panel first. PT with INR is the primary and most sensitive early test, because factor VII has the shortest half-life. aPTT prolongs later. Platelet count, fibrinogen and thrombin time are characteristically normal, and their normality is the discriminator against disseminated intravascular coagulation.

LOINC terms (not verified this session, listed as leads): prothrombin time 5902-2, INR 6301-6, aPTT 3173-2, platelet count 777-3, fibrinogen 3255-7.

Factor assays. Reduced factors II, VII, IX and X with normal factors V and VIII. This pattern is the classic discriminator, because liver failure depresses factor V while vitamin K antagonism does not. Vogel et al. tracked factors VII and X specifically (PMID:3222685).

PIVKA-II. Elevated des-gamma-carboxyprothrombin is the mechanistically specific marker of vitamin K antagonism. HPO HP:0045063 exists for it. It is established in veterinary diagnosis of anticoagulant poisoning and under-used in human toxicology. Note the pitfall: PIVKA-II is also a hepatocellular carcinoma tumor marker, and the assay is far more often ordered for that purpose. Context resolves it.

Toxicological confirmation. This is what makes the diagnosis specific rather than generic. Available methods, in publication order:

Method Matrix Performance Source
HPLC with UV plasma The original chlorophacinone method PMID:2769823, PMID:10216974
Ion chromatography with ion-trap ESI-MS plasma chlorophacinone-specific PMID:19016234
LC-MS/MS, validated blood simultaneous rodenticide panel PMID:25595137
UPLC-MS/MS with dispersive liquid-liquid microextraction urine LODs 0.003 to 0.03 ng/mL for nine rodenticides PMID:29960250
HPLC-MS/MS animal serum seven anticoagulants plus dicoumarol PMID:36869712
UPLC-MS, interlaboratory validated animal liver PMID:37313802
LC-MS/MS, 18-analyte forensic panel whole blood, bile, vitreous humor FDA-validated, 8-minute run PMID:39893780

The 2025 forensic panel is the current state of the art and covers chlorophacinone explicitly. Verbatim (PMID:39893780): "a liquid chromatography-tandem mass spectrometry method capable of quantifying eighteen anticoagulant or antiplatelet compounds (apixaban, rivaroxaban, dabigatran, warfarin, acenocoumarol, fluindione, brodifacoum, bromadiolone, difenacoum, difethialone, chlorophacinone, coumatetralyl, flocoumafen, acetylsalicylic acid, clopidogrel, dipyridamole, ticagrelor, and ticlopidine) in a single run."

Serial concentration monitoring guides discharge, not treatment. Verbatim (PMID:10216974): "If PI is useful for planning phytomenadione treatment and used for therapeutic monitoring of AVK, the chlorophacinone concentrations follow-up may provide a better estimation of the duration of hospitalisation."

And a caution that the concentration and the effect decouple. Verbatim (PMID:10216974): "Chlorophacinone accumulation in target cells or existence of an unidentified metabolite may explain persistence of the hypocoagulability syndrome at low plasmatic concentrations of chlorophacinone." A low plasma level does not mean the patient is safe to stop vitamin K.

Imaging and other modalities

CT head without contrast for suspected intracranial hemorrhage. CT or ultrasound of the abdomen for haemoperitoneum. These are complication-directed, not diagnostic of the poisoning. No specific imaging finding exists.

Biopsy and pathology have no diagnostic role in the living patient. At autopsy the finding is multi-organ hemorrhage. Verbatim (PMID:40974629): "Six fatalities occurred and autopsy findings in three cases primarily indicated multi-organ hemorrhage and necrosis."

Electrophysiology has no role.

Genetic testing

No role in human diagnosis. VKORC1 sequencing is used in rodent population surveillance for resistance management, which is not diagnosis of a human patient.

Omics diagnostics

None. No RNA-seq, proteomic, metabolomic, epigenomic or liquid-biopsy assay is used or proposed.

Clinical criteria

No formal diagnostic criteria exist. No DSM, no society guideline defining the entity. The one relevant consensus document is the American Association of Poison Control Centers out-of-hospital management guideline for long-acting anticoagulant rodenticides (PMID:17357377, Clin Toxicol 2007). It is a triage guideline, not a diagnostic criterion set, and it is now nineteen years old.

The operative diagnostic posture is the one Chong and Lo state, verbatim (PMID:31857739): "Superwarfarin poisoning should therefore be suspected in all patients with unexplained prolongation of prothrombin time, and can be confirmed by their detection in serum."

Differential diagnosis

Condition Distinguishing feature
Warfarin or other coumarin therapy or overdose Toxicology assay separates them. Warfarin coagulopathy corrects in days, not weeks
Brodifacoum, bromadiolone, difenacoum poisoning Same syndrome. Only assay separates. Duration is much longer
Dietary vitamin K deficiency, malabsorption, prolonged antibiotics Corrects promptly and durably with normal-dose vitamin K, no rebound
Liver failure Factor V is reduced. In vitamin K antagonism factor V is normal
Disseminated intravascular coagulation Thrombocytopenia, low fibrinogen, elevated D-dimer, schistocytes
Vitamin K-dependent coagulation factor deficiency, VKCFD1/VKCFD2 Lifelong history from infancy, family history, biallelic GGCX or VKORC1 variants. Already curated in this repository
Acquired factor inhibitor Mixing study fails to correct
Factitious disorder or covert administration The reason toxicological confirmation matters. Two homicides in 88 cases (PMID:40974629)

The mixing study deserves a line of its own. In chlorophacinone poisoning the prolonged PT corrects on mixing with normal plasma, because the defect is factor deficiency and not an inhibitor. That is a cheap, fast, widely available discriminator.

Screening

No population screening exists and none is indicated. Occupational biomonitoring of pest-control workers is conceivable and not established practice.


11. Outcome / Prognosis

Mortality. Low overall, meaningful in severe deliberate ingestion.

Measure Value Source
Morbidity or mortality across all US exposures 2 percent PMID:26239439
Deaths in pooled global case reports 6 of 88 PMID:40974629
Deaths in east China confirmed series 1 of 117 PMID:30483606
Human deaths in French PCC data, 2004 to 2007 none reported PMID:21171851

The 6 in 88 figure is not a case fatality rate. It is the fatality proportion in a corpus of published case reports, which are selected for being unusual or severe. Curate it with measure_type: CASES_IN_LITERATURE reasoning and say so plainly.

Leading cause of death. Intracranial hemorrhage (PMID:26239439). Paradoxical thrombosis is a second, rare fatal route (PMID:16716547).

Recovery. Complete, if the patient survives the bleeding and completes vitamin K therapy. There is no chronic sequela of the toxin itself. Residual disability, when it occurs, is neurological and follows intracranial hemorrhage rather than the poisoning.

Prognostic factors. Amount ingested, and it is not linear, since half-life lengthens with dose (PMID:2769823). Latency to presentation. Peak INR. Whether bleeding is intracranial. Adherence to prolonged vitamin K, given the rebound pattern (PMID:3222685). Suicidal intent, which predicts both a large dose and delayed presentation.

Quality of life instruments. None applied. No data.


12. Treatment

Decontamination

Activated charcoal within 1 to 2 hours of ingestion. Watt et al. index Charcoal/therapeutic use as a MeSH term (PMID:16499407). Cholestyramine has been used to interrupt enterohepatic recirculation for the superwarfarins; the evidence is weak and it is not standard.

  • treatment_term: NCIT:C15986 Pharmacotherapy, verified in repository use
  • therapeutic_agent: activated charcoal, CHEBI:37527 (not verified this session)
  • therapeutic_modality: SMALL_MOLECULE

Vitamin K1 (phytomenadione, phylloquinone). The antidote.

This is the mainstay and the one treatment with unambiguous mechanism-directed evidence. It bypasses the blocked reductase step by supplying vitamin K in quantity sufficient to drive carboxylation despite the inhibitor.

Verbatim (PMID:40974629): "Vitamin K1 administration (intravenous or oral) was the primary treatment."

Dosing, from the class review (PMID:26239439, verbatim): "Treatment of acute hemorrhagic symptoms often required intravenous vitamin K1 in excess of 50 to 100 mg; chronic maintenance with 100 mg PO vitamin K1 daily was the most frequently used dose required to suppress coagulopathy. Treatment courses averaged 168 days."

Note again that 168 days is a class figure dominated by brodifacoum. Chlorophacinone requires weeks, not months. The Vogel case normalized at 7 weeks (PMID:3222685).

The INR threshold for non-bleeding patients, verbatim (PMID:16499407): "If there is no active bleeding and the INR is < or =4.0, no treatment is required; if the INR is > or =4.0 phytomenadione 10mg should be administered intravenously."

  • treatment_term: NCIT:C15986 Pharmacotherapy
  • therapeutic_agent: CHEBI:18067 phylloquinone (verified in repository use)
  • therapeutic_modality: SMALL_MOLECULE
  • target_mechanisms: target the VKOR inhibition node with treatment_effect: BYPASSES

Factor replacement for active bleeding

Verbatim (PMID:16499407): "If active bleeding occurs, prothrombin complex concentrate (which contains factors II, VII, IX and X) 50 units/kg, or recombinant activated factor VII 1.2-4.8 mg or fresh frozen plasma 15 mL/kg (if no concentrate is available) and phytomenadione 10mg intravenously (100 microg/kg bodyweight for a child) should be given."

Current practice favors four-factor PCC over fresh frozen plasma. Verbatim (PMID:31857739): "Treatment for superwarfarin poisoning includes rapid correction of factor deficiencies with either 4-factor prothrombin complex concentrate or fresh frozen plasma in patients with active bleeding."

  • Four-factor PCC: NCIT:C208347 Four-factor Prothrombin Complex Concentrate (verified via OLS4). Note that this is a product term, not a NCIT:C25218 clinical action, so it goes in therapeutic_agent under a Pharmacotherapy action, not in the treatment_term slot.
  • Fresh frozen plasma transfusion: the sibling entry Vitamin_K_Dependent_Coagulation_Factor_Deficiency already binds an FFP treatment term. Copy that binding rather than re-deriving it.
  • therapeutic_modality: PROTEIN_REPLACEMENT

Watch the thrombotic hazard. Verbatim (PMID:26239439): "thrombotic complications accompanying hemostatic therapy have also been observed."

Enzyme induction with phenobarbital

Chlorophacinone-specific, and one of the few interventions with chlorophacinone rather than class evidence. Verbatim (PMID:10216974): "Under phenobarbital 200 mg/day, chlorophacinone exhibited an apparent elimination half-life (3.27 days) shorter than in previously reported cases."

Confirmed independently. Verbatim (PMID:2769823): "The effect of phenobarbital on the elimination of cholorophacinone could be studied in one case. An increased elimination was noted when phenobarbital was administered."

It is a case-level observation in a total of two patients across two papers, and phenobarbital sedation in a bleeding patient is not free. Curate it as reported and not established.

Antifibrinolytics

Both the Lagrange case and the Watt review index Antifibrinolytic Agents/therapeutic use in MeSH. Tranexamic acid is the agent, CHEBI:48669 (verified in repository use). Adjunctive for mucosal bleeding.

Supportive care

Red cell transfusion for symptomatic anemia. NCIT:C15747 Supportive Care. Neurosurgical intervention for intracranial hemorrhage. Psychiatric evaluation and admission after deliberate ingestion, which is not optional in this population.

What is not treatment

Hemodialysis does not remove chlorophacinone; it is highly protein bound and lipid soluble. No gene therapy, cell therapy, RNA therapy or immunotherapy exists or is proposed. No clinical trial is registered for chlorophacinone poisoning. I searched neither ClinicalTrials.gov nor WHO ICTRP directly this session, and I state that as a limitation rather than as a negative finding.

Pharmacogenomics

No CPIC guideline. No PharmGKB annotation for chlorophacinone. The VKORC1 and CYP2C9 annotations that exist are for warfarin and acenocoumarol and must not be transferred.


13. Prevention

Primary prevention. Product stewardship and access control. Tamper-resistant bait stations. Bittering agents in bait. Storage away from children and livestock. The two US livestock epizootics both trace to bait accessible through a structural gap: old bait between wall studs reachable through a hole in the plywood (PMID:17037620), and "Multiple piles and an open pail of white powdery material" in a calf facility (PMID:35000500, verbatim). Both were preventable by housekeeping.

Regulatory prevention. Active and moving. The EPA's 2022 Proposed Interim Decision covers chlorophacinone with the other six anticoagulant rodenticides, and a Final Biological Evaluation was released 2024-11-21. Measures under consideration include product cancellations, added requirements, and reclassification to Restricted Use Pesticide. California's Department of Pesticide Regulation issued Enforcement Letter 24-20 in December 2024 addressing chlorophacinone and warfarin restricted-material status, and held an informal public workshop on anticoagulant rodenticide mitigation with draft regulations in September 2025. Chlorophacinone is also under EU biocide review; ECHA maintains an assessment document. These are regulatory documents rather than PMIDs, and they date fast. Cite them with retrieval dates and do not put them in evidence snippets.

Environmental prevention. Reduced-dose combination baiting is an active research direction. Verbatim (PMID:38638948): "Combinations of second generation anticoagulants were more effective than the combination of chlorophacinone and second generation anticoagulants. The results indicate that combinations of different anticoagulants at multifold lower doses than the standard may provide a successful tool for brown rat control." Note what that says: chlorophacinone combinations performed worse than SGAR combinations. It is not an endorsement.

Stereochemical reformulation is another. The bromadiolone cis-isomer proposal (PMID:33130091) does not apply to chlorophacinone directly but frames the approach.

Secondary prevention. The 36 to 48 hour INR check after known exposure (PMID:16499407). And the finding that spares most children an unnecessary blood draw, verbatim (PMID:16499407): "There are now sufficient data in young children exposed to anticoagulant rodenticides to conclude that routine measurement of the international normalised ratio (INR) is unnecessary." That is a strong, specific, actionable recommendation and belongs in the entry.

Tertiary prevention. Completing the full vitamin K course. Serial INR monitoring after discontinuation to catch rebound. The Vogel case is the argument, verbatim: "This case emphasizes the need for prolonged clinical and laboratory follow-up for rodenticide intoxications and for vitamin K administration for several weeks."

Food-chain prevention. A one-week milk withdrawal period after livestock exposure (PMID:32645465).

Immunization, genetic screening, genetic counseling. Not applicable. Say so.


14. Other Species / Natural Disease

Chlorophacinone toxicosis in animals is far better documented than in humans, and much of the mechanistic and pathological evidence available comes from there. Grade all of it MODEL_ORGANISM even when it is a spontaneous veterinary case, per repository convention.

Species with documented natural chlorophacinone poisoning

Species NCBITaxon Context Source
Domestic cattle, Bos taurus NCBITaxon:9913 14 calves, fatal PMID:35000500
Sheep, Ovis aries NCBITaxon:9940 11 lambs fatal; 18 lactating ewes sublethal PMID:17037620, PMID:32645465
Domestic dog, Canis lupus familiaris NCBITaxon:9615 Over 60 percent of French domestic animal cases PMID:21171851, PMID:9534772
Red-tailed hawk, Buteo jamaicensis NCBITaxon:52604 (unverified) Experimental sublethal secondary exposure PMID:35633457
American badger, Taxidea taxus NCBITaxon:50636 (unverified) Endangered; residues detected PMID:40252754
Black-tailed prairie dog, Cynomys ludovicianus NCBITaxon:45480 (unverified) Target species; residue kinetics PMID:25997570
Norway rat, Rattus norvegicus NCBITaxon:10116 Target species PMID:24781908, PMID:41278179
House mouse, Mus musculus NCBITaxon:10090 Target species; resistance PMID:24781908, PMID:36181415
Black rat, Rattus rattus NCBITaxon:10117 Target; resistance PMID:35970209
Hares and rabbits Nearly 50 percent of French wildlife submissions PMID:21171851

Verbatim on the French wildlife pattern (PMID:21171851): "in wildlife hares and rabbits account for almost 50% of the submitted cases, followed by predators and scavengers."

The calf and lamb epizootics as comparative pathology

These are the best-documented pathological descriptions of chlorophacinone poisoning in any mammal. Verbatim (PMID:35000500): "Significant concentrations of chlorophacinone were detected at 4.2, 3.6, and 2.9 ppm in liver." And the summary sentence: "Acute hemorrhage and death occurred in fourteen 1.5-mo-old, crossbred calves following ingestion of the vitamin K antagonist chlorophacinone."

The lamb epizootic gives the tempo. Verbatim (PMID:17037620): "Eleven lambs, approximately 1-2 months of age, suddenly developed epistaxis, respiratory distress, and facial and cervical swelling. Affected animals died within 1-2 hours from the onset of clinical signs." Liver residues were 0.58 and 0.50 ppm.

Note the discrepancy worth curating: lambs died at liver concentrations roughly six-fold lower than the calves. Species, age and dose timing all differ. Do not derive a lethal threshold from two case reports.

A distinctive non-hemorrhagic sign in birds

Verbatim (PMID:35633457): "Four of the six CPN-exposed RTHAs exhibited ptiloerection, an indication of thermoregulatory dysfunction due to CPN toxicity." And the linkage, verbatim: "PT values were associated with ptiloerection duration and frequency; therefore, sublethal CPN exposure can directly or indirectly evoke adverse effects in wild birds."

This is the only reported observation I found that might connect to the alleged non-anticoagulant mechanism of §6. Thermoregulatory dysfunction is not obviously a bleeding phenomenon. The authors do not attribute it to uncoupling. Do not make that leap for them. It is a good candidate for a discussions entry with kind: KNOWLEDGE_GAP.

Veterinary relevance

Anticoagulant rodenticide poisoning is among the most common causes of poisoning in dogs worldwide. Onset in dogs and cats is 3 to 5 days. Presenting signs are lethargy, weakness, dyspnea from pulmonary or pleural hemorrhage, epistaxis, hemoptysis, melena, pale mucous membranes and swollen joints. Vitamin K1 duration differs by agent: 5 to 10 days for short-acting compounds, 21 to 30 days for long-acting ones. Oral vitamin K1 given with a fat-containing meal is 4 to 5 times more effective than vitamin K1 given alone. Coagulation should be rechecked weekly and again 5 to 6 days after stopping therapy. These are veterinary reference statements (MSD Veterinary Manual, Cornell AHDC) rather than PMIDs. Cite them as such or find primary sources.

PIVKA-II has established veterinary diagnostic use for distinguishing anticoagulant poisoning from other canine coagulopathies (doi:10.3390/ani11092612, Animals 2021).

Comparative biology and evolutionary conservation

The vitamin K cycle is deeply conserved across vertebrates. VKORC1 orthologs exist in every species listed above, and the drug target is the same protein in a rat and in a person. That conservation is precisely why a rodenticide is dangerous to non-target mammals and birds, and why rodent resistance alleles are informative about human pharmacology.

Interspecies sensitivity differs, and avian VKOR biology has been studied specifically: "Avian interspecific differences in VKOR activity and inhibition: Insights from amino acid sequence and mRNA expression ratio of VKORC1 and VKORC1L1" (Comp Biochem Physiol C, 2020). I did not retrieve its PMID. It is worth fetching.

Look for OMIA records under anticoagulant rodenticide toxicosis. I did not query OMIA this session.

Zoonotic potential

None. This is a chemical, not a transmissible agent. Cross-species susceptibility is universal among vertebrates, which is a different thing and should not be recorded under transmission.


15. Model Organisms

There is no purpose-built disease model here, because the model is simply dosing an animal with the compound. That is worth stating plainly in the entry rather than leaving the section blank.

Induced models

System Species Use Source
Acute oral dosing, laboratory rat Rattus norvegicus Efficacy and LD50 determination Regulatory toxicology; PMID:41278179 for a 2025 Malaysian urban-rat laboratory study
Y139C resistant house mouse, dose-response Mus musculus Blood-clotting response and resistance factors PMID:36181415
Secondary-exposure raptor model Buteo jamaicensis Free-flying hawks fed chlorophacinone-exposed prairie dogs, then radio-tracked 33 days PMID:35633457
Prairie dog residue kinetics Cynomys ludovicianus Secondary-hazard modeling PMID:25997570
Lactating ewe accidental exposure Ovis aries Mammary transfer pharmacokinetics PMID:32645465
Fish hepatic microsomes various In vitro biotransformation of ARs PMID:35085616

The hawk study is unusually well-designed for a toxicology field experiment and is the single best model-organism source for linking a coagulation readout to an observable clinical sign.

Genetic models

The relevant genetic models are naturally occurring resistance genotypes in wild rodent populations, not engineered lines. Vkorc1 Y139C, L128S, S149I, E155K, E155Q, and the M. spretus-derived quadruple haplotype. No Vkorc1 knockout mouse is used for this purpose, and a full knockout would be lethal.

Phenotype recapitulation

High. Rodents, cattle, sheep, dogs and raptors all reproduce the human sequence: delayed onset, prolonged PT, multi-site hemorrhage, response to vitamin K1. The mechanism is the same protein in every case.

For a ModelMechanismLink on the calf and lamb reports, relationship: RECAPITULATES and fidelity: MODERATE is defensible, with limitations noting that ruminant vitamin K status differs from human because of rumen microbial synthesis, that route and dose were uncontrolled, and that these are diagnostic submissions rather than designed experiments.

For the hawk study, relationship: PARTIALLY_RECAPITULATES against a coagulopathy node, with a readout for prothrombin time, direction: INCREASED. Ptiloerection has no human counterpart and should be recorded as a limitation, not folded into a human phenotype.

Limitations of every model

None reproduces deliberate massive human ingestion. None addresses human dose-dependent half-life. Rodent models are confounded by the fact that the animal is the intended target, so its physiology has been selected against the compound.

Resources

MGI, RGD, IMPC for Vkorc1. Alliance of Genome Resources for orthology. No model repository holds a chlorophacinone-specific line.


Gaps, Conflicts, and Curation Cautions

State these in the entry rather than papering over them.

  1. No MONDO term exists. MONDO:0029000 poisoning is the only anchor, and it is a broadMatch. A term request is the right action.
  2. The mitochondrial uncoupling mechanism has no locatable primary source. Zero PubMed records combine chlorophacinone or the indandiones with uncoupling. The claim is in textbooks and regulatory prose. Curate as a knowledge gap or omit.
  3. Half-life is reported inconsistently. 10 hours in one secondary source, 3.27 days measured under phenobarbital induction (PMID:10216974), and dose-dependent lengthening (PMID:2769823). Weeks of pharmacodynamic effect. Do not curate a single number.
  4. Molecular weight is reported as both 364.8 and 374.8. Resolve against PubChem before writing it.
  5. Class citations dominate. Watt 2005 and King 2015 are about the anticoagulant rodenticide class, in which brodifacoum and bromadiolone supply most of the case material. Every quote from them supports a class claim, not a chlorophacinone claim. Grading them as direct evidence for chlorophacinone-specific nodes would be Named Entity Confusion reached through a review article.
  6. No human VKORC1 pharmacogenomic evidence exists for chlorophacinone. The warfarin literature is not transferable.
  7. The 88-case forensic series does not name chlorophacinone in its abstract. It reports 7 rodenticide types across 38 cases with brodifacoum and bromadiolone commonest. Its coagulation and latency statistics are class statistics.
  8. The paradoxical thrombosis abstract is four sentences long and does not state the protein C mechanism. Anything beyond the fact of the phenomenon needs a different source or an inferred marker.
  9. Several abstracts in this report reached me through a summarizing fetch rather than verbatim: PMID:33130091, PMID:25997570, PMID:22326314, PMID:29960250, PMID:21033437, PMID:30483606. The quotation marks in those summaries are the summarizer's, not mine. Refetch before any of them becomes an evidence snippet.
  10. PMIDs cited but not yet cached in this worktree: 31857739, 39893780, 38638948, 17037620, 32645465, 35633457, 34748846, 40252754, 30483606, 36181415, 17357377, 25595137, 29960250, 19016234, 36869712, 37313802, 38260864, 41278179. Run just fetch-reference PMID:<id> for each one you intend to cite, and commit the cache files, so CI does not refetch them as abstract-only and break a full-text snippet.
  11. Ontology IDs marked "not verified this session" in the tables above were written from memory and must be resolved through OAK or OLS before binding. That set includes HP:0000132, HP:0001903, HP:0001259, GO:0005789, CHEBI:37527, hgnc:2623, and every NCBITaxon ID flagged unverified.

Reference List

Cached in this worktree already:

PMID Citation
40974629 Yu Z, et al. A retrospective analysis of 88 anticoagulant rodenticide poisoning cases: Characteristics and forensic implications. Forensic Sci Int. 2025. doi:10.1016/j.forsciint.2025.112660
26239439 King N, Tran MH. Long-Acting Anticoagulant Rodenticide (Superwarfarin) Poisoning: A Review of Its Historical Development, Epidemiology, and Clinical Management. Transfus Med Rev. 2015. doi:10.1016/j.tmrv.2015.06.002
16499407 Watt BE, Proudfoot AT, Bradberry SM, Vale JA. Anticoagulant rodenticides. Toxicol Rev. 2005. doi:10.2165/00139709-200524040-00005
16716547 Papin F, et al. Lethal paradoxical cerebral vein thrombosis due to suspicious anticoagulant rodenticide intoxication with chlorophacinone. Forensic Sci Int. 2007. doi:10.1016/j.forsciint.2006.04.003
10216974 Lagrange F, et al. Toxicological management of chlorophacinone poisoning. Acta Clin Belg. 1999
2769823 Burucoa C, et al. Chlorophacinone intoxication. A biological and toxicological study. J Toxicol Clin Toxicol. 1989. doi:10.3109/15563658909038571
3222685 Vogel JJ, et al. [Prolonged anticoagulation following chlorophacinone poisoning]. Schweiz Med Wochenschr. 1988
21171851 Berny P, et al. Prevalence of anticoagulant rodenticide poisoning in humans and animals in France and substances involved. Clin Toxicol. 2010. doi:10.3109/15563650.2010.533678
24781908 Esther A, et al. [Rodenticide resistance and consequences]. Bundesgesundheitsblatt. 2014. doi:10.1007/s00103-013-1930-z
35970209 Bermejo-Nogales A, et al. VKORC1 single nucleotide polymorphisms in rodents in Spain. Chemosphere. 2022. doi:10.1016/j.chemosphere.2022.136021
35000500 Radke SL, et al. Acute hemorrhage and death in calves following chlorophacinone exposure. J Vet Diagn Invest. 2022. doi:10.1177/10406387211069369

Cited but not yet cached:

PMID Citation
31857739 Chong YK, Lo AWI. Superwarfarin (Long-Acting Anticoagulant Rodenticides) Poisoning: from Pathophysiology to Laboratory-Guided Clinical Management. Clin Biochem Rev. 2019
17037620 Chlorophacinone exposure causing an epizootic of acute fatal hemorrhage in lambs. J Vet Diagn Invest. 2006
32645465 Accidental chlorophacinone exposure of lactating ewes: Clinical follow-up and human health dietary implications. Food Chem Toxicol. 2020
35633457 Toxicological responses to sublethal anticoagulant rodenticide exposure in free-flying hawks. Environ Sci Pollut Res Int. 2022
34748846 Exposure of predatory and scavenging birds to anticoagulant rodenticides in France. Sci Total Environ. 2022
40252754 Anticoagulant rodenticide exposure in endangered American badgers and fishers from British Columbia, Canada, 1998 to 2018. Environ Pollut. 2025
39893780 Simultaneous quantification of eighteen therapeutic oral anticoagulants, rodenticides, and antiplatelet agents by LC-MS/MS. J Pharm Biomed Anal. 2025
38638948 A strategy to improve rodent control while reducing rodenticide release into the environment. Heliyon. 2024
30483606 Anticoagulant rodenticide intoxication in east China: a three-year analysis. Forensic Sci Res. 2016. doi:10.1080/20961790.2016.1242042
36181415 Anticoagulant rodenticide blood-clotting dose-responses and resistance factors for Y139C house mice. Pest Manag Sci. 2022
17357377 Caravati EM, et al. Long-acting anticoagulant rodenticide poisoning: an evidence-based consensus guideline for out-of-hospital management. Clin Toxicol. 2007
33130091 Water vole management: Could anticoagulant rodenticides stereochemistry mitigate the ecotoxicity issues associated to their use? Environ Toxicol Pharmacol. 2021
25997570 Retention time of chlorophacinone in black-tailed prairie dogs informs secondary hazards from a prairie dog rodenticide bait. Pest Manag Sci. 2016
22326314 Primary and secondary poisoning by anticoagulant rodenticides of non-target animals in Spain. Sci Total Environ. 2012
41278179 Exploring the Effectiveness of Chlorophacinone in Managing Urban Rat Infestation: A Laboratory Study on the Norway Rat. J Arthropod Borne Dis. 2025
25595137 A validated LC-MS-MS method for simultaneous identification and quantitation of rodenticides in blood. J Anal Toxicol. 2015
29960250 Simultaneous determination of nine anticoagulant rodenticides by UPLC-MS/MS. J Chromatogr B. 2018
19016234 Characterization and determination of chlorophacinone in plasma by ion chromatography coupled with ion trap ESI-MS. Biomed Chromatogr. 2009
36869712 Comprehensive Evaluation of an HPLC-MS-MS Method for Quantitation of Seven Anti-Coagulant Rodenticides and Dicoumarol in Animal Serum. J Anal Toxicol. 2023
37313802 Validation and interlaboratory comparison of anticoagulant rodenticide analysis in animal livers using UPLC-MS. J Vet Diagn Invest. 2023
38260864 An open dataset of anticoagulant rodenticides in liver samples from California kingsnakes and raptors in Gran Canaria. Data Brief. 2024
35085616 New insights on in vitro biotransformation of anticoagulant rodenticides in fish. Chemosphere. 2022
9534772 [Anticoagulant rodenticide poisoning in dogs in The Netherlands]. Tijdschr Diergeneeskd. 1997
39688840 Gummin DD, et al. 2023 Annual Report of the National Poison Data System: 41st Annual Report. Clin Toxicol. 2024
41432769 2024 Annual report of the National Poison Data System: 42nd annual report. Clin Toxicol. 2025

Non-PubMed sources, with retrieval date 2026-09-03:

  • US EPA, Restrictions on Rodenticide Products. https://www.epa.gov/rodenticides/restrictions-rodenticide-products
  • US EPA, Rodent Control Pesticide Safety Review, including the 2022 Proposed Interim Decision for the anticoagulant rodenticides and the Final Biological Evaluation of 2024-11-21. https://www.epa.gov/rodenticides/rodent-control-pesticide-safety-review
  • California Department of Pesticide Regulation, Enforcement Letter 24-20 (December 2024) and the September 2025 Anticoagulant Rodenticide Mitigation Informal Public Workshop draft regulations.
  • ECHA chlorophacinone assessment. https://echa.europa.eu/documents/10162/e623897b-b36e-7527-7ed4-12c9aa311639
  • USDA APHIS, The Use of Chlorophacinone in Wildlife Damage Management. https://www.aphis.usda.gov/sites/default/files/26-chlorophacinone.pdf (fetch returned unparseable PDF this session; contents not extracted)
  • USDA Forest Service SERA TR-056-10-03b, Chlorophacinone Human Health and Ecological Risk Assessment. https://www.fs.usda.gov/foresthealth/pesticide/pdfs/Chlorophacinone.pdf (not retrieved)
  • NPIC Rodenticides Fact Sheet. https://npic.orst.edu/factsheets/rodenticides.html
  • StatPearls, Rodenticide Toxicity. https://www.ncbi.nlm.nih.gov/books/NBK554428/
  • MSD Veterinary Manual, Anticoagulant Rodenticide Poisoning in Animals.
  • Cornell University AHDC Comparative Coagulation, Vitamin K Therapy.
  • PubChem CID 19402, chlorophacinone. https://pubchem.ncbi.nlm.nih.gov/compound/Chlorophacinone
  • EBI OLS4 for all verified CHEBI, GO, HP, UBERON and MONDO identifiers. https://www.ebi.ac.uk/ols4

Sources: - PubMed E-utilities - EBI Ontology Lookup Service 4 - PubChem CID 19402 - Anticoagulant rodenticide intoxication in east China (PMC6197128) - US EPA Restrictions on Rodenticide Products - US EPA Rodent Control Pesticide Safety Review - ECHA chlorophacinone document - NPIC Rodenticides Fact Sheet - StatPearls Rodenticide Toxicity - USDA APHIS chlorophacinone - MSD Veterinary Manual, anticoagulant rodenticide poisoning - Cornell AHDC Vitamin K Therapy - AAPCC out-of-hospital guideline - Superwarfarin poisoning: pathophysiology to laboratory-guided management

Reference Validation

Checked with linkml-reference-validator 0.2.1.

Outcome Count
References checked 48
Resolved 47
Unresolved (possible confabulation) 1
Unverifiable 0
References weighed for topical relevance 47
On topic 31
Off topic 0

Unresolved references

These identifiers did not resolve to a record and may be fabricated. A lookup that failed for transport reasons is indistinguishable from one that failed because the record does not exist, so spot-check before acting on them:

  • PMID:34748846 (1 mention) - Identifier did not resolve to a record

Term Validation

Checked with linkml-term-validator 0.4.5, through the ols: adapter.

Outcome Count
Terms checked 45
Resolved 45
Unresolved (possible confabulation) 0
Obsolete 0
Unverifiable 0
Terms whose name was checked 27
Terms named correctly 15
Terms named as a different term 6
Terms whose name is worth a second look 6

Terms the report names something else

These identifiers resolve, so nothing about them looks wrong, and the ontology calls them something unrelated to what the report calls them. That usually means the identifier is not the one the sentence needs:

  • HP:0000132 (2 mentions) - the report calls it "not verified this session"; HP calls it Menorrhagia
  • HP:0001903 (2 mentions) - the report calls it "not verified this session"; HP calls it Anemia
  • HP:0001259 (2 mentions) - the report calls it "not verified"; HP calls it Coma
  • NCBITaxon:52604 (1 mention) - the report calls it "unverified"; NCBITaxon calls it Pleurocapsales
  • NCBITaxon:50636 (1 mention) - the report calls it "unverified"; NCBITaxon calls it Trigoniophthalmus
  • NCBITaxon:45480 (1 mention) - the report calls it "unverified"; NCBITaxon calls it Cynomys ludovicianus

Terms whose name is worth a second look

The report's name for these is recognisably related to the term's own name without being one of them. A loose paraphrase reads the same way as a citation of the wrong sibling term - and so does a related synonym, which the ontology records precisely because it names something adjacent rather than the same thing - so these are listed rather than judged:

  • NCBITaxon:9913 (1 mention) - the report calls it "Domestic cattle, Bos taurus"; NCBITaxon calls it Bos taurus*, and lists "domestic cattle" among its other names
  • NCBITaxon:9940 (1 mention) - the report calls it "Sheep, Ovis aries"; NCBITaxon calls it Ovis aries*
  • NCBITaxon:9615 (1 mention) - the report calls it "Domestic dog, Canis lupus familiaris"; NCBITaxon calls it Canis lupus familiaris*
  • NCBITaxon:10116 (1 mention) - the report calls it "Norway rat, Rattus norvegicus"; NCBITaxon calls it Rattus norvegicus*
  • NCBITaxon:10090 (1 mention) - the report calls it "House mouse, Mus musculus"; NCBITaxon calls it Mus musculus*
  • NCBITaxon:10117 (1 mention) - the report calls it "Black rat, Rattus rattus"; NCBITaxon calls it Rattus rattus*