Chlorophacinone poisoning is an acquired, vitamin K-antagonist coagulopathy caused by ingestion of, or other exposure to, the indanedione anticoagulant rodenticide chlorophacinone. Chlorophacinone inhibits vitamin K 2,3-epoxide reductase, so the reduced vitamin K needed as cofactor for hepatic gamma-carboxylation is not regenerated and the vitamin K-dependent coagulation factors II, VII, IX and X are secreted in an under-carboxylated, functionally inactive form. The resulting coagulopathy presents after a latent interval with mucocutaneous and internal bleeding and, because chlorophacinone accumulates in liver and is eliminated slowly, it can persist for weeks to months and rebound whenever vitamin K replacement is withdrawn.
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Conditions with similar clinical presentations that must be differentiated from Chlorophacinone Poisoning:
name: Chlorophacinone Poisoning
creation_date: "2026-09-03T00:00:00Z"
category: Environmental
categories:
- Toxic Exposure Disorder
- Rodenticide Poisoning
- Acquired Coagulopathy
synonyms:
- chlorophacinone intoxication
- indanedione anticoagulant rodenticide poisoning
description: >-
Chlorophacinone poisoning is an acquired, vitamin K-antagonist coagulopathy
caused by ingestion of, or other exposure to, the indanedione anticoagulant
rodenticide chlorophacinone. Chlorophacinone inhibits vitamin K 2,3-epoxide
reductase, so the reduced vitamin K needed as cofactor for hepatic
gamma-carboxylation is not regenerated and the vitamin K-dependent
coagulation factors II, VII, IX and X are secreted in an
under-carboxylated, functionally inactive form. The resulting coagulopathy
presents after a latent interval with mucocutaneous and internal bleeding
and, because chlorophacinone accumulates in liver and is eliminated slowly,
it can persist for weeks to months and rebound whenever vitamin K
replacement is withdrawn.
notes: >-
MONDO has no term for chlorophacinone poisoning, for indanedione or
anticoagulant rodenticide poisoning, or for rodenticide poisoning generally.
The entry therefore carries no primary disease_term; the only mapping
recorded is a broad cross-reference to MONDO:0029000 (poisoning), which
deliberately does not retire the concept from the MONDO curation queue. A
request for a specific MONDO term is the right follow-up. PIVKA-II is the
mechanistically specific marker of vitamin K antagonism and is not curated
as a phenotype here, because no source cited in this entry reports PIVKA-II
measurement in chlorophacinone poisoning. No datasets are curated: no
transcriptomic, proteomic, metabolomic or perturbation dataset for
chlorophacinone exposure was found, only residue chemistry in wildlife and
livestock tissue, which measures the compound rather than any host response.
mappings:
mondo_mappings:
- term:
id: MONDO:0029000
label: poisoning
mapping_predicate: skos:broadMatch
mapping_source: dismech
mapping_justification: >-
MONDO has no chlorophacinone-, indanedione-, or rodenticide-specific
poisoning term. MONDO:0029000 is the nearest ancestor concept and is
recorded as a broad cross-reference only.
classifications:
harrisons_chapter:
- classification_value: POISONING_ENVENOMATION
evidence:
- reference: PMID:16499407
reference_title: "Anticoagulant rodenticides."
supports: SUPPORT
directness: DIRECT
evidence_source: OTHER
snippet: "This group includes the second generation 4-hydroxycoumarins brodifacoum, bromadiolone, difenacoum, flocoumafen and the indanedione derivatives chlorophacinone and diphacinone."
explanation: >-
Places chlorophacinone within the anticoagulant rodenticides, a
pesticide poisoning entity handled in the poisoning and overdose
chapter rather than in a haematology chapter.
pathophysiology:
- name: Systemic Chlorophacinone Exposure
biological_scale: ORGANISM
description: >-
Chlorophacinone enters the body by ingestion of bait or concentrate.
Inhalational and transcutaneous routes are documented for the
anticoagulant rodenticides as a class; the cited source does not attribute
either specifically to chlorophacinone. Ingested doses reported in human
cases span roughly 100 mg to nearly 2 g, and plasma concentrations after a
large deliberate ingestion reach the tens of mg/L.
chemical_entities:
- preferred_term: chlorophacinone
term:
id: CHEBI:81796
label: Chlorophacinone
evidence:
- reference: PMID:10216974
reference_title: "Toxicological management of chlorophacinone poisoning."
supports: SUPPORT
directness: DIRECT
evidence_source: HUMAN_CLINICAL
snippet: "Comprehensive testing for abused and therapeutic drugs in blood confirmed chlorophacinone (maximum plasma level: 27.6 mg/L), an antivitamin K (AVK) rodenticide."
explanation: >-
Documents measured systemic chlorophacinone exposure in a human
poisoning and identifies the compound as a vitamin K antagonist.
- reference: PMID:10216974
reference_title: "Toxicological management of chlorophacinone poisoning."
supports: SUPPORT
directness: DIRECT
evidence_source: HUMAN_CLINICAL
snippet: "A 33-year-old man was admitted 8 hours after voluntary ingestion of 1875 mg of chlorophacinone (C'Operat 750 mL)."
explanation: >-
Gives the ingested dose in a deliberate human chlorophacinone poisoning.
- reference: PMID:26239439
reference_title: "Long-Acting Anticoagulant Rodenticide (Superwarfarin) Poisoning: A Review of Its Historical Development, Epidemiology, and Clinical Management."
supports: SUPPORT
directness: INDIRECT
evidence_source: HUMAN_CLINICAL
snippet: "Inhalational, transcutaneous, and oral routes of exposure have been documented."
explanation: >-
Establishes the routes of exposure for the long-acting anticoagulant
rodenticide class. Marked indirect because the review reports routes for
the class as a whole and does not attribute each route to
chlorophacinone specifically.
downstream:
- target: Vitamin K Epoxide Reductase Inhibition
causal_link_type: DIRECT
description: >-
Absorbed chlorophacinone reaches the hepatocyte endoplasmic reticulum
and binds the vitamin K epoxide reductase complex.
evidence:
- reference: PMID:16499407
reference_title: "Anticoagulant rodenticides."
supports: SUPPORT
directness: INDIRECT
evidence_source: OTHER
snippet: "Anticoagulant rodenticides inhibit vitamin K(1)-2,3 epoxide reductase and thus the synthesis of vitamin K and subsequently clotting factors II, VII, IX and X."
explanation: >-
States the pharmacological target of the anticoagulant rodenticides,
the class to which the same review assigns chlorophacinone. Tagged
OTHER because the sentence is a pharmacological assertion in a
narrative review rather than a reported study result.
- target: Hepatic Accumulation and Prolonged Elimination
causal_link_type: DIRECT
description: >-
The absorbed compound partitions into liver, where it is retained far
longer than plasma concentrations alone would suggest.
evidence:
- reference: PMID:2769823
reference_title: "Chlorophacinone intoxication. A biological and toxicological study."
supports: SUPPORT
directness: DIRECT
evidence_source: HUMAN_CLINICAL
snippet: "The determination of half-lives was investigated and the results indicate that the greater the quantity absorbed, the longer the half-life."
explanation: >-
Links the absorbed chlorophacinone burden to the duration of its own
elimination in human poisoning cases.
- name: Vitamin K Epoxide Reductase Inhibition
biological_scale: MOLECULAR
description: >-
Chlorophacinone inhibits the vitamin K 2,3-epoxide reductase complex
(VKORC1) in the hepatocyte endoplasmic reticulum. VKORC1 normally reduces
vitamin K 2,3-epoxide back to vitamin K hydroquinone; blocking it halts
the vitamin K cycle at the epoxide step.
cell_types:
- preferred_term: hepatocyte
term:
id: CL:0000182
label: hepatocyte
molecular_functions:
- preferred_term: vitamin K epoxide reductase activity
modifier: DECREASED
term:
id: GO:0047057
label: vitamin-K-epoxide reductase (warfarin-sensitive) activity
genes:
- preferred_term: VKORC1
term:
id: hgnc:23663
label: VKORC1
evidence:
- reference: PMID:26239439
reference_title: "Long-Acting Anticoagulant Rodenticide (Superwarfarin) Poisoning: A Review of Its Historical Development, Epidemiology, and Clinical Management."
supports: SUPPORT
directness: INDIRECT
evidence_source: OTHER
snippet: "Long-acting anticoagulant rodenticides (LAARs) inhibit vitamin K epoxide reductase (VKOR)."
explanation: >-
Names VKOR as the molecular target for the long-acting anticoagulant
rodenticides. Marked indirect because the sentence is class-level and does not
name chlorophacinone.
- reference: PMID:35970209
reference_title: "VKORC1 single nucleotide polymorphisms in rodents in Spain."
supports: SUPPORT
directness: INDIRECT
evidence_source: COMPUTATIONAL
snippet: "Computational analysis of binding predictions found out that the brown rat S149I mutation predicted a high reduction of the binding affinity of chlorophacinone and brodifacoum ARs"
explanation: >-
Chlorophacinone is modelled as a VKORC1 ligand whose binding is
abolished by a VKORC1 active-site substitution, which is evidence that
VKORC1 is its target. Marked indirect because the binding is predicted
computationally, in rat VKORC1 rather than human.
- reference: PMID:31857739
reference_title: "Superwarfarin (Long-Acting Anticoagulant Rodenticides) Poisoning: from Pathophysiology to Laboratory-Guided Clinical Management."
supports: SUPPORT
directness: INDIRECT
evidence_source: OTHER
snippet: "The mechanism of action is by inhibition of vitamin K epoxide reductase, resulting in the inability of the body to recycle vitamin K."
explanation: >-
States epoxide reductase inhibition and the resulting failure to recycle
vitamin K. Marked indirect because the review covers the long-acting
rodenticides as a class. Note also that the review frames the class as
warfarin derivatives, which chlorophacinone is not: it is an indanedione,
so the review's structural reasoning about bulky aromatic sidechains does
not carry over even though the enzyme target does.
- reference: PMID:24781908
reference_title: "[Rodenticide resistance and consequences]."
supports: SUPPORT
directness: INDIRECT
evidence_source: MODEL_ORGANISM
snippet: "Polymorphisms in the vitamin K epoxide reductase complex subunit 1 (VKORC1) gene and respective substitutions of amino acids in the VKOR enzyme are the major cause for rodenticide resistance."
explanation: >-
Rodenticide resistance maps to VKORC1 coding changes, which is genetic
corroboration that VKORC1 is the drug target. Marked indirect on two
steps: the quoted sentence says "rodenticide" rather than naming
chlorophacinone, and it concerns rodent resistance genetics rather than
human poisoning.
downstream:
- target: Depletion of the Reduced Vitamin K Pool
causal_link_type: DIRECT
description: >-
With the epoxide reductase blocked, vitamin K 2,3-epoxide accumulates
and the hydroquinone pool available as carboxylase cofactor falls.
evidence:
- reference: PMID:16499407
reference_title: "Anticoagulant rodenticides."
supports: SUPPORT
directness: INDIRECT
evidence_source: OTHER
snippet: "Anticoagulant rodenticides inhibit vitamin K(1)-2,3 epoxide reductase and thus the synthesis of vitamin K and subsequently clotting factors II, VII, IX and X."
explanation: >-
States that epoxide reductase inhibition curtails vitamin K supply,
which is this edge.
- name: Depletion of the Reduced Vitamin K Pool
biological_scale: MOLECULAR
description: >-
The hepatic pool of reduced vitamin K (hydroquinone) is depleted because
the epoxide formed at each carboxylation cycle cannot be recycled. Dietary
vitamin K intake alone does not replace it at the rate the cycle consumes
it, which is why exogenous vitamin K1 in gram-scale cumulative doses is
the antidote.
biological_processes:
- preferred_term: vitamin K metabolic process
modifier: DECREASED
term:
id: GO:0042373
label: vitamin K metabolic process
chemical_entities:
- preferred_term: phylloquinone
term:
id: CHEBI:18067
label: phylloquinone
evidence:
- reference: PMID:3222685
reference_title: "[Prolonged anticoagulation following chlorophacinone poisoning]."
supports: SUPPORT
directness: DIRECT
evidence_source: HUMAN_CLINICAL
snippet: "Under high dose vitamin K therapy the Quick was rapidly corrected but fell again on each vitamin K withdrawal."
explanation: >-
Correction on exogenous vitamin K and relapse on its withdrawal is the
clinical signature of a depleted, pharmacologically unreplenishable
reduced vitamin K pool in a chlorophacinone-poisoned patient.
downstream:
- target: Impaired Gamma-Carboxylation of Vitamin K-Dependent Clotting Factors
causal_link_type: DIRECT
description: >-
Gamma-glutamyl carboxylase requires vitamin K hydroquinone as cofactor,
so the depleted pool limits carboxylation directly.
evidence:
- reference: PMID:16499407
reference_title: "Anticoagulant rodenticides."
supports: SUPPORT
directness: INDIRECT
evidence_source: OTHER
snippet: "Anticoagulant rodenticides inhibit vitamin K(1)-2,3 epoxide reductase and thus the synthesis of vitamin K and subsequently clotting factors II, VII, IX and X."
explanation: >-
The review couples loss of vitamin K to loss of the four factors.
Marked indirect because the abstract states the consequence for the
factors without naming gamma-carboxylation as the intervening step.
- name: Impaired Gamma-Carboxylation of Vitamin K-Dependent Clotting Factors
biological_scale: CELLULAR
description: >-
Hepatic gamma-glutamyl carboxylase can no longer convert glutamate
residues in the Gla domains of the vitamin K-dependent proteins to
gamma-carboxyglutamate. The affected proteins are prothrombin (factor II)
and factors VII, IX and X, together with the anticoagulant proteins C and
S. Under-carboxylated Gla domains cannot chelate calcium and so cannot
dock the factor onto anionic phospholipid membranes.
cell_types:
- preferred_term: hepatocyte
term:
id: CL:0000182
label: hepatocyte
biological_processes:
- preferred_term: peptidyl-glutamic acid carboxylation
modifier: DECREASED
term:
id: GO:0017187
label: peptidyl-glutamic acid carboxylation
genes:
- preferred_term: GGCX
term:
id: hgnc:4247
label: GGCX
- preferred_term: F2
term:
id: hgnc:3535
label: F2
- preferred_term: F7
term:
id: hgnc:3544
label: F7
- preferred_term: F9
term:
id: hgnc:3551
label: F9
- preferred_term: F10
term:
id: hgnc:3528
label: F10
- preferred_term: PROC
term:
id: hgnc:9451
label: PROC
- preferred_term: PROS1
term:
id: hgnc:9456
label: PROS1
notes: >-
Proteins C and S are listed as substrates of the same carboxylase and are
lost alongside the procoagulant factors. Their loss is the accepted
explanation offered for the paradoxical thrombotic events reported in this
class of poisoning, but no cited reference here demonstrates that
mechanism, so it is recorded as a hypothesis in `discussions` rather than
as a curated causal edge.
evidence:
- reference: PMID:16499407
reference_title: "Anticoagulant rodenticides."
supports: SUPPORT
directness: INDIRECT
evidence_source: OTHER
snippet: "Anticoagulant rodenticides inhibit vitamin K(1)-2,3 epoxide reductase and thus the synthesis of vitamin K and subsequently clotting factors II, VII, IX and X."
explanation: >-
Identifies factors II, VII, IX and X as the affected proteins. Marked indirect
because the abstract does not itself use the term gamma-carboxylation.
downstream:
- target: Functional Deficiency of Coagulation Factors II, VII, IX and X
causal_link_type: DIRECT
description: >-
Under-carboxylated factors are secreted but cannot assemble on
membranes, so measured factor activity falls.
evidence:
- reference: PMID:3222685
reference_title: "[Prolonged anticoagulation following chlorophacinone poisoning]."
supports: SUPPORT
directness: DIRECT
evidence_source: HUMAN_CLINICAL
snippet: "Prothrombin time (and vitamin K dependent factors VII and X) finally normalized only 7 weeks after chlorophacinone ingestion."
explanation: >-
Directly measures loss of vitamin K-dependent factor activity, and its
recovery, in a chlorophacinone-poisoned patient.
- name: Functional Deficiency of Coagulation Factors II, VII, IX and X
biological_scale: MOLECULAR
description: >-
Circulating activity of prothrombin and factors VII, IX and X falls.
Because factor VII has the shortest half-life of the four, the prothrombin
time and INR move first; the activated partial thromboplastin time follows
as factors IX, X and II decline.
notes: >-
The order in which the four factors fall, and the resulting fact that the
prothrombin time moves before the activated partial thromboplastin time,
follows from their differing plasma half-lives. That is standard
coagulation physiology and is not demonstrated in any source cited in this
entry, which report the depressed factor activities without measuring the
sequence. The ordering is stated because it explains the delayed onset and
the assay pattern, not because a cited paper establishes it.
genes:
- preferred_term: F2
term:
id: hgnc:3535
label: F2
- preferred_term: F7
term:
id: hgnc:3544
label: F7
- preferred_term: F9
term:
id: hgnc:3551
label: F9
- preferred_term: F10
term:
id: hgnc:3528
label: F10
evidence:
- reference: PMID:3222685
reference_title: "[Prolonged anticoagulation following chlorophacinone poisoning]."
supports: SUPPORT
directness: DIRECT
evidence_source: HUMAN_CLINICAL
snippet: "Prothrombin time (and vitamin K dependent factors VII and X) finally normalized only 7 weeks after chlorophacinone ingestion."
explanation: >-
Reports factor VII and factor X activity as the quantities that were
depressed and later normalized after chlorophacinone ingestion.
- reference: PMID:16499407
reference_title: "Anticoagulant rodenticides."
supports: SUPPORT
directness: INDIRECT
evidence_source: OTHER
snippet: "If active bleeding occurs, prothrombin complex concentrate (which contains factors II, VII, IX and X) 50 units/kg, or recombinant activated factor VII 1.2-4.8 mg or fresh frozen plasma 15 mL/kg (if no concentrate is available) and phytomenadione 10mg intravenously (100 microg/kg bodyweight for a child) should be given."
explanation: >-
Replacing exactly factors II, VII, IX and X is the recommended
haemostatic response, which corroborates that those four are the
deficient proteins. Marked indirect because this is a therapeutic
recommendation, not a direct measurement of factor levels.
downstream:
- target: Prolonged Coagulopathy
causal_link_type: DIRECT
description: >-
Loss of the four factors disables both the extrinsic and the common
coagulation pathway, giving a global clotting defect.
evidence:
- reference: PMID:40974629
reference_title: "A retrospective analysis of 88 anticoagulant rodenticide poisoning cases: Characteristics and forensic implications."
supports: SUPPORT
directness: INDIRECT
evidence_source: HUMAN_CLINICAL
snippet: "Coagulation function tests revealed average values of aPTT, PT, and INR of aPTT: 110 (3.71 ∼ 212) s, PT: 100 (11.6 ∼ 300) s and INR: 9 (0.98 ∼ 38.2), respectively, all significantly exceeding normal ranges."
explanation: >-
Both PT and aPTT are grossly prolonged, which is the expected pattern
when the shared factors of the extrinsic and common pathways are lost.
Marked indirect because the case series covers anticoagulant
rodenticides collectively and reports no chlorophacinone stratum.
- name: Hepatic Accumulation and Prolonged Elimination
biological_scale: ORGANISM
description: >-
Chlorophacinone is lipid-soluble, accumulates in liver and undergoes
enterohepatic recirculation, so its biological half-life is long and grows
longer with larger ingested doses. This is the property that separates the
long-acting rodenticides from warfarin clinically, and it is what makes
the coagulopathy last weeks rather than days. Chlorophacinone is
nevertheless shorter-acting than the second-generation compounds: the
class treatment durations reported in reviews are driven by brodifacoum
and should not be read as a chlorophacinone expectation.
notes: >-
Because enterohepatic recirculation is part of what sustains this node,
interrupting it is a plausible therapeutic target. A bile sequestrant,
cholestyramine, cut mortality from 67 per cent to 11 per cent in a rabbit
model of brodifacoum poisoning (PMID:29897553). That is a different
compound in a different species, and no chlorophacinone data exist, so no
treatment is curated from it. Recorded because the node names the mechanism
the intervention would act on.
chemical_entities:
- preferred_term: chlorophacinone
term:
id: CHEBI:81796
label: Chlorophacinone
evidence:
- reference: PMID:16499407
reference_title: "Anticoagulant rodenticides."
supports: SUPPORT
directness: INDIRECT
evidence_source: OTHER
snippet: "The greater potency and duration of action of long-acting anticoagulant rodenticides is attributed to their: (i) greater affinity for vitamin K(1)-2,3-epoxide reductase; (ii) ability to disrupt the vitamin K(1)-epoxide cycle at more than one point; (iii) hepatic accumulation; and (iv) unusually long biological half-lives due to high lipid solubility and enterohepatic circulation."
explanation: >-
Names hepatic accumulation, lipid solubility and enterohepatic
circulation as the basis for the prolonged action of the long-acting
group, to which the same review assigns chlorophacinone. Marked indirect
because the sentence is about the class. Only clauses (iii) and (iv),
hepatic accumulation and long biological half-life, are curated on this
node. Clauses (i) and (ii), greater VKOR affinity and disruption of the
cycle at more than one point, are deliberately not carried over: this
entry also records that rodent-efficacy sources call chlorophacinone
first-generation, which is a statement about lower potency, so a
class-level affinity claim cannot be asserted for it here.
- reference: PMID:2769823
reference_title: "Chlorophacinone intoxication. A biological and toxicological study."
supports: SUPPORT
directness: DIRECT
evidence_source: HUMAN_CLINICAL
snippet: "The determination of half-lives was investigated and the results indicate that the greater the quantity absorbed, the longer the half-life."
explanation: >-
Measures chlorophacinone half-life in three human poisonings and shows
it lengthens with dose, the kinetic behaviour of a saturable
accumulating compartment.
- reference: PMID:10216974
reference_title: "Toxicological management of chlorophacinone poisoning."
supports: SUPPORT
directness: INDIRECT
evidence_source: HUMAN_CLINICAL
snippet: "Chlorophacinone accumulation in target cells or existence of an unidentified metabolite may explain persistence of the hypocoagulability syndrome at low plasmatic concentrations of chlorophacinone."
explanation: >-
Observes that the coagulopathy outlasts measurable plasma
chlorophacinone. Marked indirect because the authors offer tissue accumulation
as one of two candidate explanations rather than demonstrating it.
downstream:
- target: Prolonged Coagulopathy
causal_link_type: DIRECT
description: >-
Because drug persists in liver after plasma levels fall, inhibition of
the vitamin K cycle continues and the coagulopathy rebounds whenever
vitamin K replacement stops.
evidence:
- reference: PMID:26239439
reference_title: "Long-Acting Anticoagulant Rodenticide (Superwarfarin) Poisoning: A Review of Its Historical Development, Epidemiology, and Clinical Management."
supports: SUPPORT
directness: INDIRECT
evidence_source: OTHER
snippet: "Long-acting anticoagulant rodenticides have an extremely high affinity for VKOR compared with warfarin, characterized by rebound coagulopathy and bleeding after initial treatment and the need for high-dose, long-term therapy with vitamin K1."
explanation: >-
Links the persistent drug-target interaction to rebound coagulopathy
and to the need for prolonged vitamin K1. Marked indirect because the
review speaks for the class and does not report a chlorophacinone
stratum.
- name: Prolonged Coagulopathy
biological_scale: ORGANISM
description: >-
The clotting defect is global, severe and long-lived. Prothrombin time,
INR and activated partial thromboplastin time are grossly prolonged, often
beyond the measurable range of the assay, and normalization can take weeks
to months after a single large ingestion.
biological_processes:
- preferred_term: blood coagulation
modifier: DECREASED
term:
id: GO:0007596
label: blood coagulation
- preferred_term: hemostasis
modifier: DECREASED
term:
id: GO:0007599
label: hemostasis
evidence:
- reference: PMID:2769823
reference_title: "Chlorophacinone intoxication. A biological and toxicological study."
supports: SUPPORT
directness: DIRECT
evidence_source: HUMAN_CLINICAL
snippet: "The data collected in this study confirm the particularly prolonged anticoagulant effect of this compound and show that the knowledge of plasma concentrations may be very useful for clinicians"
explanation: >-
Confirms the prolonged anticoagulant effect from serial measurements in
three human chlorophacinone intoxications.
- reference: PMID:3222685
reference_title: "[Prolonged anticoagulation following chlorophacinone poisoning]."
supports: SUPPORT
directness: DIRECT
evidence_source: HUMAN_CLINICAL
snippet: "Her Quick time at admission was less than 10% (Prothrombin time 79 sec., normal control 12 sec.)."
explanation: >-
Quantifies the severity of the coagulopathy at presentation in a
chlorophacinone poisoning.
downstream:
- target: Multicompartment Hemorrhage
causal_link_type: DIRECT
description: >-
With thrombin generation crippled, haemostatic plugs cannot be
stabilized, so bleeding occurs at mucosal surfaces, into soft tissue and
into any internal organ.
evidence:
- reference: PMID:16499407
reference_title: "Anticoagulant rodenticides."
supports: SUPPORT
directness: INDIRECT
evidence_source: HUMAN_CLINICAL
snippet: "Substantial ingestion produces epistaxis, gingival bleeding, widespread bruising, haematomas, haematuria with flank pain, menorrhagia, gastrointestinal bleeding, rectal bleeding and haemorrhage into any internal organ; anaemia may result."
explanation: >-
Enumerates the bleeding manifestations that follow substantial
anticoagulant rodenticide ingestion.
- name: Multicompartment Hemorrhage
biological_scale: ORGANISM
description: >-
Bleeding is characteristically multifocal rather than confined to one
site. Mucocutaneous bleeding predominates, with haematuria the single most
frequently reported manifestation, and haemorrhage into serous cavities,
muscle and the central nervous system also occurs.
biological_processes:
- preferred_term: hemostasis
modifier: DECREASED
term:
id: GO:0007599
label: hemostasis
evidence:
- reference: PMID:40974629
reference_title: "A retrospective analysis of 88 anticoagulant rodenticide poisoning cases: Characteristics and forensic implications."
supports: SUPPORT
directness: INDIRECT
evidence_source: HUMAN_CLINICAL
snippet: "Multi-organ hemorrhage was the predominant clinical manifestation, with hematuria being the most frequently reported symptom (n = 39)."
explanation: >-
Establishes multi-organ haemorrhage as the dominant presentation across
88 human anticoagulant rodenticide poisonings, which is what this node
claims. Marked indirect because the series pools rodenticides and does
not report a chlorophacinone stratum.
- reference: PMID:35000500
reference_title: "Acute hemorrhage and death in calves following chlorophacinone exposure."
supports: SUPPORT
directness: INDIRECT
evidence_source: MODEL_ORGANISM
snippet: "Each of the submitted calves had moderate-to-severe hemorrhage within various tissues and body cavities, including the thymus, subcutaneous region of the neck, mediastinum, lungs, pericardial sac, heart, spleen, perirenal fat, urinary bladder, and skeletal muscle, including the diaphragm."
explanation: >-
A chlorophacinone-attributed, liver-residue-confirmed poisoning in which
the anatomical distribution of the bleeding was documented at necropsy.
Recorded as veterinary in vivo evidence supplementing, not replacing,
the human case evidence for this node.
downstream:
- target: Hypovolemic Shock and Death
causal_link_type: DIRECT
description: >-
Continued blood loss, or haemorrhage into a closed and unforgiving
compartment such as the cranium, is what kills.
evidence:
- reference: PMID:16499407
reference_title: "Anticoagulant rodenticides."
supports: SUPPORT
directness: INDIRECT
evidence_source: HUMAN_CLINICAL
snippet: "Severe blood loss may result in hypovolaemic shock, coma and death."
explanation: >-
States the fatal pathway from haemorrhage in anticoagulant rodenticide
poisoning.
- name: Hypovolemic Shock and Death
biological_scale: ORGANISM
description: >-
Death follows either exsanguinating blood loss with hypovolaemic shock or
haemorrhage into the central nervous system. Intracranial haemorrhage is
the most commonly reported cause of death in this class of poisoning.
evidence:
- reference: PMID:26239439
reference_title: "Long-Acting Anticoagulant Rodenticide (Superwarfarin) Poisoning: A Review of Its Historical Development, Epidemiology, and Clinical Management."
supports: SUPPORT
directness: INDIRECT
evidence_source: HUMAN_CLINICAL
snippet: "Deaths were most commonly associated with intracranial hemorrhage."
explanation: >-
Identifies the leading fatal event across 174 reviewed cases. Marked indirect
because the review reports the class and does not stratify by agent.
- reference: PMID:40974629
reference_title: "A retrospective analysis of 88 anticoagulant rodenticide poisoning cases: Characteristics and forensic implications."
supports: SUPPORT
directness: INDIRECT
evidence_source: HUMAN_CLINICAL
snippet: "Six fatalities occurred and autopsy findings in three cases primarily indicated multi-organ hemorrhage and necrosis."
explanation: >-
Reports fatalities and their autopsy correlate in a pooled anticoagulant
rodenticide case series. Marked indirect for the same pooling reason.
phenotypes:
- category: Laboratory
name: Prolonged Prothrombin Time
description: >-
Prothrombin time and INR are prolonged, usually first and most markedly,
because factor VII has the shortest half-life of the affected factors.
Values frequently exceed the measurable range of the assay.
phenotype_term:
preferred_term: Prolonged prothrombin time
term:
id: HP:0008151
label: Prolonged prothrombin time
diagnostic: true
evidence:
- reference: PMID:3222685
reference_title: "[Prolonged anticoagulation following chlorophacinone poisoning]."
supports: SUPPORT
directness: DIRECT
evidence_source: HUMAN_CLINICAL
snippet: "Her Quick time at admission was less than 10% (Prothrombin time 79 sec., normal control 12 sec.)."
explanation: >-
A chlorophacinone-poisoned patient with a prothrombin time of 79 seconds
against a 12-second control.
- reference: PMID:26239439
reference_title: "Long-Acting Anticoagulant Rodenticide (Superwarfarin) Poisoning: A Review of Its Historical Development, Epidemiology, and Clinical Management."
supports: SUPPORT
directness: INDIRECT
evidence_source: HUMAN_CLINICAL
snippet: "Most patients present with coagulation assay values beyond measurable limits."
explanation: >-
Describes the typical magnitude of the derangement. Marked indirect because it
is a class-level statement.
- category: Laboratory
name: Prolonged Activated Partial Thromboplastin Time
description: >-
The activated partial thromboplastin time is also prolonged, reflecting
loss of factors IX, X and II from the intrinsic and common pathways.
phenotype_term:
preferred_term: Prolonged partial thromboplastin time
term:
id: HP:0003645
label: Prolonged partial thromboplastin time
evidence:
- reference: PMID:40974629
reference_title: "A retrospective analysis of 88 anticoagulant rodenticide poisoning cases: Characteristics and forensic implications."
supports: SUPPORT
directness: INDIRECT
evidence_source: HUMAN_CLINICAL
snippet: "Coagulation function tests revealed average values of aPTT, PT, and INR of aPTT: 110 (3.71 ∼ 212) s, PT: 100 (11.6 ∼ 300) s and INR: 9 (0.98 ∼ 38.2), respectively, all significantly exceeding normal ranges."
explanation: >-
Reports aPTT prolongation alongside PT and INR across 88 anticoagulant
rodenticide poisonings. Marked indirect because the series pools agents.
- category: Laboratory
name: Reduced Factor VII Activity
phenotype_term:
preferred_term: Reduced factor VII activity
term:
id: HP:0008169
label: Reduced factor VII activity
description: >-
Factor VII activity falls earliest because its plasma half-life is the
shortest of the vitamin K-dependent procoagulant factors.
evidence:
- reference: PMID:3222685
reference_title: "[Prolonged anticoagulation following chlorophacinone poisoning]."
supports: SUPPORT
directness: DIRECT
evidence_source: HUMAN_CLINICAL
snippet: "Prothrombin time (and vitamin K dependent factors VII and X) finally normalized only 7 weeks after chlorophacinone ingestion."
explanation: >-
Factor VII activity was depressed and was tracked to normalization in a
chlorophacinone poisoning.
- category: Laboratory
name: Reduced Factor X Activity
phenotype_term:
preferred_term: Reduced factor X activity
term:
id: HP:0008321
label: Reduced factor X activity
evidence:
- reference: PMID:3222685
reference_title: "[Prolonged anticoagulation following chlorophacinone poisoning]."
supports: SUPPORT
directness: DIRECT
evidence_source: HUMAN_CLINICAL
snippet: "Prothrombin time (and vitamin K dependent factors VII and X) finally normalized only 7 weeks after chlorophacinone ingestion."
explanation: >-
Factor X activity was depressed and was tracked to normalization in a
chlorophacinone poisoning.
- category: Hematologic
name: Hematuria
description: >-
Blood in the urine, frequently with flank pain from clot passage. This is
the single most commonly reported bleeding manifestation of anticoagulant
rodenticide poisoning.
phenotype_term:
preferred_term: Hematuria
term:
id: HP:0000790
label: Hematuria
evidence:
- reference: PMID:40974629
reference_title: "A retrospective analysis of 88 anticoagulant rodenticide poisoning cases: Characteristics and forensic implications."
supports: SUPPORT
directness: INDIRECT
evidence_source: HUMAN_CLINICAL
snippet: "Multi-organ hemorrhage was the predominant clinical manifestation, with hematuria being the most frequently reported symptom (n = 39)."
explanation: >-
Establishes haematuria as the most frequently reported bleeding
manifestation, in 39 of 88 pooled cases. No frequency band is curated
from that proportion: the series is a synthesis of published case
reports and so is enriched for severe and fatal presentations, and this
entry's own epidemiology records that only about 2 per cent of reported
exposures produce morbidity at all. The sources support a rank, not a
rate. Marked indirect because the denominator covers anticoagulant
rodenticides collectively rather than chlorophacinone alone.
- reference: PMID:26239439
reference_title: "Long-Acting Anticoagulant Rodenticide (Superwarfarin) Poisoning: A Review of Its Historical Development, Epidemiology, and Clinical Management."
supports: SUPPORT
directness: INDIRECT
evidence_source: HUMAN_CLINICAL
snippet: "The most frequently reported bleeding sites are mucocutaneous, with hematuria being the most common feature."
explanation: >-
An independent review of 174 cases reaches the same ranking. Marked indirect
because it gives a rank rather than a proportion, and is class-level.
- category: Hematologic
name: Epistaxis
phenotype_term:
preferred_term: Epistaxis
term:
id: HP:0000421
label: Epistaxis
evidence:
- reference: PMID:16499407
reference_title: "Anticoagulant rodenticides."
supports: SUPPORT
directness: INDIRECT
evidence_source: HUMAN_CLINICAL
snippet: "Substantial ingestion produces epistaxis, gingival bleeding, widespread bruising, haematomas, haematuria with flank pain, menorrhagia, gastrointestinal bleeding, rectal bleeding and haemorrhage into any internal organ; anaemia may result."
explanation: >-
Lists epistaxis among the bleeding manifestations of substantial
anticoagulant rodenticide ingestion.
- category: Hematologic
name: Gingival Bleeding
phenotype_term:
preferred_term: Gingival bleeding
term:
id: HP:0000225
label: Gingival bleeding
evidence:
- reference: PMID:16499407
reference_title: "Anticoagulant rodenticides."
supports: SUPPORT
directness: INDIRECT
evidence_source: HUMAN_CLINICAL
snippet: "Substantial ingestion produces epistaxis, gingival bleeding, widespread bruising, haematomas, haematuria with flank pain, menorrhagia, gastrointestinal bleeding, rectal bleeding and haemorrhage into any internal organ; anaemia may result."
explanation: >-
Lists gingival bleeding among the mucocutaneous manifestations.
- category: Hematologic
name: Widespread Bruising
phenotype_term:
preferred_term: Bruising susceptibility
term:
id: HP:0000978
label: Bruising susceptibility
evidence:
- reference: PMID:16499407
reference_title: "Anticoagulant rodenticides."
supports: SUPPORT
directness: INDIRECT
evidence_source: HUMAN_CLINICAL
snippet: "Substantial ingestion produces epistaxis, gingival bleeding, widespread bruising, haematomas, haematuria with flank pain, menorrhagia, gastrointestinal bleeding, rectal bleeding and haemorrhage into any internal organ; anaemia may result."
explanation: >-
Lists widespread bruising and haematomas among the manifestations.
- category: Gastrointestinal
name: Gastrointestinal Hemorrhage
phenotype_term:
preferred_term: Gastrointestinal hemorrhage
term:
id: HP:0002239
label: Gastrointestinal hemorrhage
evidence:
- reference: PMID:16499407
reference_title: "Anticoagulant rodenticides."
supports: SUPPORT
directness: INDIRECT
evidence_source: HUMAN_CLINICAL
snippet: "Substantial ingestion produces epistaxis, gingival bleeding, widespread bruising, haematomas, haematuria with flank pain, menorrhagia, gastrointestinal bleeding, rectal bleeding and haemorrhage into any internal organ; anaemia may result."
explanation: >-
Lists gastrointestinal and rectal bleeding among the manifestations.
- category: Gastrointestinal
name: Hematochezia
phenotype_term:
preferred_term: Hematochezia
term:
id: HP:0002573
label: Hematochezia
evidence:
- reference: PMID:16499407
reference_title: "Anticoagulant rodenticides."
supports: SUPPORT
directness: INDIRECT
evidence_source: HUMAN_CLINICAL
snippet: "Substantial ingestion produces epistaxis, gingival bleeding, widespread bruising, haematomas, haematuria with flank pain, menorrhagia, gastrointestinal bleeding, rectal bleeding and haemorrhage into any internal organ; anaemia may result."
explanation: >-
Lists rectal bleeding separately from gastrointestinal bleeding among the
manifestations.
- category: Neurologic
name: Intracranial Hemorrhage
description: >-
Bleeding into the cranial vault, including intracerebral and intracerebellar
haemorrhage. This is the manifestation most often responsible for death.
phenotype_term:
preferred_term: Intracranial hemorrhage
term:
id: HP:0002170
label: Intracranial hemorrhage
severity: SEVERE
evidence:
- reference: PMID:26239439
reference_title: "Long-Acting Anticoagulant Rodenticide (Superwarfarin) Poisoning: A Review of Its Historical Development, Epidemiology, and Clinical Management."
supports: SUPPORT
directness: INDIRECT
evidence_source: HUMAN_CLINICAL
snippet: "Deaths were most commonly associated with intracranial hemorrhage."
explanation: >-
Identifies intracranial haemorrhage as the leading fatal event across
174 reviewed cases. Marked indirect because the review is class-level.
- category: Hematologic
name: Hemoperitoneum
phenotype_term:
preferred_term: Hemoperitoneum
term:
id: HP:0011854
label: Hemoperitoneum
evidence:
- reference: PMID:16499407
reference_title: "Anticoagulant rodenticides."
supports: SUPPORT
directness: INDIRECT
evidence_source: HUMAN_CLINICAL
snippet: "Spontaneous haemoperitoneum has been described."
explanation: >-
Reports spontaneous haemoperitoneum in anticoagulant rodenticide
poisoning.
- category: Genitourinary
name: Menorrhagia
phenotype_term:
preferred_term: Menorrhagia
term:
id: HP:0000132
label: Menorrhagia
evidence:
- reference: PMID:16499407
reference_title: "Anticoagulant rodenticides."
supports: SUPPORT
directness: INDIRECT
evidence_source: HUMAN_CLINICAL
snippet: "Substantial ingestion produces epistaxis, gingival bleeding, widespread bruising, haematomas, haematuria with flank pain, menorrhagia, gastrointestinal bleeding, rectal bleeding and haemorrhage into any internal organ; anaemia may result."
explanation: >-
Lists menorrhagia among the bleeding manifestations.
- category: Genitourinary
name: Flank Pain
phenotype_term:
preferred_term: Flank pain
term:
id: HP:0030157
label: Flank pain
evidence:
- reference: PMID:16499407
reference_title: "Anticoagulant rodenticides."
supports: SUPPORT
directness: INDIRECT
evidence_source: HUMAN_CLINICAL
snippet: "Substantial ingestion produces epistaxis, gingival bleeding, widespread bruising, haematomas, haematuria with flank pain, menorrhagia, gastrointestinal bleeding, rectal bleeding and haemorrhage into any internal organ; anaemia may result."
explanation: >-
Flank pain is reported accompanying haematuria.
- category: Hematologic
name: Anemia
phenotype_term:
preferred_term: Anemia
term:
id: HP:0001903
label: Anemia
evidence:
- reference: PMID:16499407
reference_title: "Anticoagulant rodenticides."
supports: SUPPORT
directness: INDIRECT
evidence_source: HUMAN_CLINICAL
snippet: "Substantial ingestion produces epistaxis, gingival bleeding, widespread bruising, haematomas, haematuria with flank pain, menorrhagia, gastrointestinal bleeding, rectal bleeding and haemorrhage into any internal organ; anaemia may result."
explanation: >-
States that anaemia may follow the blood loss.
- category: Cardiovascular
name: Hypovolemic Shock
phenotype_term:
preferred_term: Hypovolemic shock
term:
id: HP:0031274
label: Hypovolemic shock
severity: SEVERE
evidence:
- reference: PMID:16499407
reference_title: "Anticoagulant rodenticides."
supports: SUPPORT
directness: INDIRECT
evidence_source: HUMAN_CLINICAL
snippet: "Severe blood loss may result in hypovolaemic shock, coma and death."
explanation: >-
States hypovolaemic shock as a consequence of severe blood loss in
anticoagulant rodenticide poisoning.
- category: Gastrointestinal
name: Nausea
description: >-
Nausea with agitation was recorded in the early, pre-coagulopathic phase of
a large deliberate chlorophacinone ingestion.
phenotype_term:
preferred_term: Nausea
term:
id: HP:0002018
label: Nausea
evidence:
- reference: PMID:10216974
reference_title: "Toxicological management of chlorophacinone poisoning."
supports: SUPPORT
directness: DIRECT
evidence_source: HUMAN_CLINICAL
snippet: "The examination revealed excitation and nausea, with a normal prothrombin index (PI)."
explanation: >-
Reports nausea at presentation, eight hours after ingestion and before
the prothrombin index had fallen.
- category: Neurologic
name: Coma
phenotype_term:
preferred_term: Coma
term:
id: HP:0001259
label: Coma
severity: SEVERE
evidence:
- reference: PMID:16499407
reference_title: "Anticoagulant rodenticides."
supports: SUPPORT
directness: INDIRECT
evidence_source: HUMAN_CLINICAL
snippet: "Severe blood loss may result in hypovolaemic shock, coma and death."
explanation: >-
Names coma as a terminal consequence of severe blood loss in
anticoagulant rodenticide poisoning. Marked indirect because the sentence
is class-level.
- category: Musculoskeletal
name: Acute Compartment Syndrome
description: >-
Bleeding into a closed fascial compartment can raise compartment pressure
enough to cause ischaemic injury to the muscle and nerve within it. This is
a surgically actionable complication that does not follow from haemorrhage
and hypovolaemia alone, and diagnosis was delayed five days in the reported
case.
evidence:
- reference: PMID:32447894
reference_title: "[A case of acute osteofascial compartment syndrome caused by rodenticide poisoning]."
supports: SUPPORT
directness: INDIRECT
evidence_source: HUMAN_CLINICAL
snippet: "The early manifestations of this patient were mainly coagulation dysfunction, and finally acute osteofascial compartment syndrome."
explanation: >-
Reports compartment syndrome following anticoagulant rodenticide
poisoning. Marked indirect because the case report names the agent only
as an anticoagulant rodenticide, not as chlorophacinone. No phenotype
term is bound: HPO has no compartment syndrome term.
biochemical:
- name: Plasma chlorophacinone concentration
presence: PRESENT
evidence:
- reference: PMID:10216974
reference_title: "Toxicological management of chlorophacinone poisoning."
supports: SUPPORT
directness: DIRECT
evidence_source: HUMAN_CLINICAL
snippet: "Comprehensive testing for abused and therapeutic drugs in blood confirmed chlorophacinone (maximum plasma level: 27.6 mg/L), an antivitamin K (AVK) rodenticide."
explanation: >-
Reports a measured maximum plasma chlorophacinone concentration in a
human poisoning.
- reference: PMID:2769823
reference_title: "Chlorophacinone intoxication. A biological and toxicological study."
supports: SUPPORT
directness: DIRECT
evidence_source: HUMAN_CLINICAL
snippet: "Plasma chlorophacinone determinations were performed in three cases of intoxication."
explanation: >-
Establishes plasma chlorophacinone measurement as the analytical basis
for confirming and following this poisoning.
- reference: PMID:1522713
reference_title: "Rapid high-performance liquid chromatographic assay of chlorophacinone in human serum."
supports: SUPPORT
directness: DIRECT
evidence_source: HUMAN_CLINICAL
snippet: "Application of this method to 20 intoxicated patients indicated that the risk of bleeding syndrome, which is always associated with this kind of intoxication, is no longer present when chlorophacinone levels drop to below 1 microgram/mL."
explanation: >-
The largest chlorophacinone-specific human series available here, twenty
poisoned patients, and the only source proposing a serum concentration
below which bleeding risk has resolved.
notes: >-
Quantification of chlorophacinone in plasma or serum confirms the agent and
tracks the exposure. It is measured by HPLC or LC-MS/MS. Concentrations
after large deliberate ingestion reach tens of mg/L. A plasma concentration
in the reference range does not exclude ongoing poisoning: in the cited
case the hypocoagulability persisted while chlorophacinone levels were low.
- name: International normalized ratio
presence: PRESENT
notes: >-
The INR is the practical bedside measure of the coagulopathy and the
quantity used to decide when and how long to give vitamin K1. In a
poisoning that is not already bleeding, guidance is to measure it 36 to 48
hours after exposure, since an INR drawn earlier can still be normal.
evidence:
- reference: PMID:16499407
reference_title: "Anticoagulant rodenticides."
supports: SUPPORT
directness: INDIRECT
evidence_source: OTHER
snippet: "In all other cases, the INR should be measured 36-48 hours post exposure."
explanation: >-
States the recommended timing for INR measurement after anticoagulant
rodenticide exposure, which is set by the delay before the coagulopathy
declares itself.
- reference: PMID:40974629
reference_title: "A retrospective analysis of 88 anticoagulant rodenticide poisoning cases: Characteristics and forensic implications."
supports: SUPPORT
directness: INDIRECT
evidence_source: HUMAN_CLINICAL
snippet: "Coagulation function tests revealed average values of aPTT, PT, and INR of aPTT: 110 (3.71 ∼ 212) s, PT: 100 (11.6 ∼ 300) s and INR: 9 (0.98 ∼ 38.2), respectively, all significantly exceeding normal ranges."
explanation: >-
Gives the observed INR range across 88 pooled anticoagulant rodenticide
poisonings. Marked indirect because the series does not stratify by
agent.
environmental:
- name: Chlorophacinone rodenticide exposure
description: >-
Exposure to chlorophacinone-containing rodenticide bait, concentrate or
powder. Human exposure is most often unintentional and paediatric, but the
cases that produce severe coagulopathy are typically deliberate ingestions
of concentrate by adults. Occupational exposure is also reported.
effect: TRIGGERS
exposure_term:
preferred_term: exposure to anticoagulant rodenticide
term:
id: ECTO:9002177
label: exposure to anticoagulant rodenticide
qualifiers:
- predicate:
preferred_term: has input
term:
id: RO:0002233
label: has input
value:
preferred_term: chlorophacinone
term:
id: CHEBI:81796
label: Chlorophacinone
evidence:
- reference: PMID:32645465
reference_title: "Accidental chlorophacinone exposure of lactating ewes: Clinical follow-up and human health dietary implications."
supports: SUPPORT
directness: INDIRECT
evidence_source: MODEL_ORGANISM
snippet: "Chlorophacinone was detected in milk on day 2 post-exposure and remained quantifiable for at least 7 days in milk of these 11 ewes."
explanation: >-
Chlorophacinone transfers into the milk of exposed livestock, so a
food-chain route to human exposure exists in principle. Marked indirect
because the measurement is in sheep and the same paper concludes that
dairy products after a one-week withdrawal pose low consumer risk; no
human poisoning by this route is reported.
- reference: PMID:16499407
reference_title: "Anticoagulant rodenticides."
supports: SUPPORT
directness: INDIRECT
evidence_source: HUMAN_CLINICAL
snippet: "Most cases of anticoagulant rodenticide exposure involve young children and, as a consequence, the amounts ingested are almost invariably small."
explanation: >-
Characterizes the dominant exposure population for anticoagulant
rodenticides, of which chlorophacinone is one.
- reference: PMID:16499407
reference_title: "Anticoagulant rodenticides."
supports: SUPPORT
directness: INDIRECT
evidence_source: HUMAN_CLINICAL
snippet: "Occupational exposure has also been reported."
explanation: >-
Records occupational exposure as an additional route for this class.
- reference: PMID:40974629
reference_title: "A retrospective analysis of 88 anticoagulant rodenticide poisoning cases: Characteristics and forensic implications."
supports: SUPPORT
directness: INDIRECT
evidence_source: HUMAN_CLINICAL
snippet: "A total of 88 poisoning cases were identified, comprising 52 cases of accidental poisoning, 31 cases of suicidal poisoning, 3 cases of unknown poisoning and 2 cases of homicide."
explanation: >-
Gives the distribution of intent across reported anticoagulant
rodenticide poisonings. Marked indirect because agents are pooled.
influences_mechanisms:
- target: Systemic Chlorophacinone Exposure
environmental_effect: TRIGGERS
causal_link_type: DIRECT
description: >-
Ingestion of chlorophacinone bait or concentrate is the route by which
the systemic chlorophacinone burden is established.
evidence:
- reference: PMID:10216974
reference_title: "Toxicological management of chlorophacinone poisoning."
supports: SUPPORT
directness: DIRECT
evidence_source: HUMAN_CLINICAL
snippet: "A 33-year-old man was admitted 8 hours after voluntary ingestion of 1875 mg of chlorophacinone (C'Operat 750 mL)."
explanation: >-
Ties ingestion of a named chlorophacinone product to the resulting
systemic exposure in a human case.
treatments:
- name: High-Dose Prolonged Vitamin K1 (Phytomenadione)
description: >-
Phytomenadione (vitamin K1) is the antidote. Supplying vitamin K from
outside restores the carboxylase cofactor that the inhibited epoxide
reductase can no longer regenerate, and the coagulation profile corrects
within hours. Because chlorophacinone persists, the dose required is far
above ordinary warfarin reversal doses and treatment must continue for
weeks; withdrawal before the drug has cleared produces rebound
coagulopathy.
therapeutic_modality: SMALL_MOLECULE
treatment_term:
preferred_term: Pharmacotherapy
term:
id: NCIT:C15986
label: Pharmacotherapy
therapeutic_agent:
- preferred_term: phylloquinone
term:
id: CHEBI:18067
label: phylloquinone
target_mechanisms:
- target: Depletion of the Reduced Vitamin K Pool
treatment_effect: RESTORES
description: >-
Exogenous vitamin K1 replenishes the substrate for the carboxylase
cofactor pool without requiring the inhibited epoxide reductase.
evidence:
- reference: PMID:3222685
reference_title: "[Prolonged anticoagulation following chlorophacinone poisoning]."
supports: SUPPORT
directness: DIRECT
evidence_source: HUMAN_CLINICAL
snippet: "Under high dose vitamin K therapy the Quick was rapidly corrected but fell again on each vitamin K withdrawal."
explanation: >-
Correction on vitamin K and relapse off it, in a chlorophacinone
poisoning, is a direct demonstration that vitamin K supply is the
limiting quantity this treatment restores.
evidence:
- reference: PMID:3222685
reference_title: "[Prolonged anticoagulation following chlorophacinone poisoning]."
supports: SUPPORT
directness: DIRECT
evidence_source: HUMAN_CLINICAL
snippet: "This case emphasizes the need for prolonged clinical and laboratory follow-up for rodenticide intoxications and for vitamin K administration for several weeks."
explanation: >-
States the duration of vitamin K therapy required after chlorophacinone
poisoning.
- reference: PMID:26239439
reference_title: "Long-Acting Anticoagulant Rodenticide (Superwarfarin) Poisoning: A Review of Its Historical Development, Epidemiology, and Clinical Management."
supports: SUPPORT
directness: INDIRECT
evidence_source: HUMAN_CLINICAL
snippet: "Treatment of acute hemorrhagic symptoms often required intravenous vitamin K1 in excess of 50 to 100 mg; chronic maintenance with 100 mg PO vitamin K1 daily was the most frequently used dose required to suppress coagulopathy."
explanation: >-
Gives the dose magnitude actually used across reported cases. Marked indirect
because the doses are pooled across long-acting anticoagulant
rodenticides rather than reported for chlorophacinone alone.
- reference: PMID:26239439
reference_title: "Long-Acting Anticoagulant Rodenticide (Superwarfarin) Poisoning: A Review of Its Historical Development, Epidemiology, and Clinical Management."
supports: SUPPORT
directness: INDIRECT
evidence_source: HUMAN_CLINICAL
snippet: "Treatment courses averaged 168 days."
explanation: >-
Quantifies treatment duration across the reviewed cases. Marked indirect
for the same class-level reason, and the figure should not be read as a
chlorophacinone expectation: the reviewed long-acting cases are dominated
by brodifacoum, whose effect outlasts chlorophacinone's.
- reference: PMID:31857739
reference_title: "Superwarfarin (Long-Acting Anticoagulant Rodenticides) Poisoning: from Pathophysiology to Laboratory-Guided Clinical Management."
supports: SUPPORT
directness: INDIRECT
evidence_source: OTHER
snippet: "Treatment for superwarfarin poisoning includes rapid correction of factor deficiencies with either 4-factor prothrombin complex concentrate or fresh frozen plasma in patients with active bleeding, and high dose vitamin K therapy given multiple times per day for a prolonged period of weeks to months."
explanation: >-
Gives the dosing frequency and the duration of high-dose vitamin K.
Marked indirect because the review speaks for the long-acting class.
- reference: PMID:16499407
reference_title: "Anticoagulant rodenticides."
supports: SUPPORT
directness: INDIRECT
evidence_source: OTHER
snippet: "If there is no active bleeding and the INR is < or =4.0, no treatment is required; if the INR is > or =4.0 phytomenadione 10mg should be administered intravenously."
explanation: >-
Gives the INR threshold at which vitamin K is started in a patient who
is not bleeding, which is the decision this treatment turns on.
- name: Coagulation Factor Replacement
description: >-
For active bleeding, immediate replacement of the missing factors is given
alongside vitamin K1, since vitamin K takes hours to restore carboxylation.
Prothrombin complex concentrate is preferred because it contains exactly
the four deficient factors; fresh frozen plasma is the fallback, and
recombinant activated factor VII has also been used.
therapeutic_modality: PROTEIN_REPLACEMENT
treatment_term:
preferred_term: Pharmacotherapy
term:
id: NCIT:C15986
label: Pharmacotherapy
therapeutic_agent:
- preferred_term: four-factor prothrombin complex concentrate
term:
id: NCIT:C208347
label: Four-factor Prothrombin Complex Concentrate
target_mechanisms:
- target: Functional Deficiency of Coagulation Factors II, VII, IX and X
treatment_effect: BYPASSES
description: >-
Transfused factor concentrate supplies fully carboxylated factors
directly, bypassing the blocked hepatic carboxylation step.
evidence:
- reference: PMID:16499407
reference_title: "Anticoagulant rodenticides."
supports: SUPPORT
directness: INDIRECT
evidence_source: OTHER
snippet: "If active bleeding occurs, prothrombin complex concentrate (which contains factors II, VII, IX and X) 50 units/kg, or recombinant activated factor VII 1.2-4.8 mg or fresh frozen plasma 15 mL/kg (if no concentrate is available) and phytomenadione 10mg intravenously (100 microg/kg bodyweight for a child) should be given."
explanation: >-
Specifies replacement of precisely the four deficient factors as the
treatment for active bleeding.
evidence:
- reference: PMID:26239439
reference_title: "Long-Acting Anticoagulant Rodenticide (Superwarfarin) Poisoning: A Review of Its Historical Development, Epidemiology, and Clinical Management."
supports: SUPPORT
directness: INDIRECT
evidence_source: HUMAN_CLINICAL
snippet: "Adjunctive hemostatic therapy with recombinant factor VIIa and prothrombin complex concentrate has been reported, and phenobarbital has been used to expedite LAAR metabolism."
explanation: >-
Confirms the adjunctive haemostatic agents used in practice. Marked indirect
because the review pools long-acting anticoagulant rodenticides.
- reference: PMID:31857739
reference_title: "Superwarfarin (Long-Acting Anticoagulant Rodenticides) Poisoning: from Pathophysiology to Laboratory-Guided Clinical Management."
supports: SUPPORT
directness: INDIRECT
evidence_source: OTHER
snippet: "Treatment for superwarfarin poisoning includes rapid correction of factor deficiencies with either 4-factor prothrombin complex concentrate or fresh frozen plasma in patients with active bleeding"
explanation: >-
Names four-factor prothrombin complex concentrate ahead of fresh frozen
plasma and confines factor replacement to patients who are bleeding.
Marked indirect because the review speaks for the long-acting class.
notes: >-
Thrombotic complications accompanying haemostatic therapy have been
reported in this class of poisoning, so factor replacement is reserved for
active bleeding rather than used to correct a number. Only four-factor
prothrombin complex concentrate is bound as a therapeutic_agent.
Recombinant activated factor VII and fresh frozen plasma, both named in
the same recommendation, are not: no suitable term was resolved for
either.
- name: Phenobarbital Enzyme Induction
description: >-
Phenobarbital has been used to accelerate hepatic metabolism of
chlorophacinone and shorten the coagulopathy. In one human case the
apparent elimination half-life under phenobarbital was 3.27 days, shorter
than in previously reported cases. This is an adjunct with limited
evidence, not standard care.
therapeutic_modality: SMALL_MOLECULE
treatment_term:
preferred_term: Pharmacotherapy
term:
id: NCIT:C15986
label: Pharmacotherapy
therapeutic_agent:
- preferred_term: phenobarbital
term:
id: CHEBI:8069
label: phenobarbital
target_mechanisms:
- target: Hepatic Accumulation and Prolonged Elimination
treatment_effect: INHIBITS
description: >-
Cytochrome P450 induction increases the rate at which chlorophacinone is
cleared, shortening the period over which it can inhibit the vitamin K
cycle.
evidence:
- reference: PMID:2769823
reference_title: "Chlorophacinone intoxication. A biological and toxicological study."
supports: SUPPORT
directness: DIRECT
evidence_source: HUMAN_CLINICAL
snippet: "An increased elimination was noted when phenobarbital was administered."
explanation: >-
Reports increased chlorophacinone elimination on phenobarbital. The
observation is from a single uncontrolled case within a three-patient
series, so it is weak evidence for a directly stated result.
evidence:
- reference: PMID:10216974
reference_title: "Toxicological management of chlorophacinone poisoning."
supports: SUPPORT
directness: DIRECT
evidence_source: HUMAN_CLINICAL
snippet: "Under phenobarbital 200 mg/day, chlorophacinone exhibited an apparent elimination half-life (3.27 days) shorter than in previously reported cases."
explanation: >-
Quantifies the half-life observed under phenobarbital against a
historical comparison. The comparison is with previously
reported cases rather than a control arm, so the effect size is not
established.
notes: >-
Recorded because it is the specific adjunct repeatedly tried in
chlorophacinone poisoning, not because the evidence is strong. Both
supporting reports are uncontrolled single-patient observations with
historical comparators.
diagnosis:
- name: Delayed coagulation testing after exposure
description: >-
The coagulopathy is not present at the moment of exposure. Prothrombin
time and INR should be measured 36 to 48 hours after exposure, because an
earlier normal result does not exclude poisoning. In a case series the
median latency to presentation was four days.
evidence:
- reference: PMID:16499407
reference_title: "Anticoagulant rodenticides."
supports: SUPPORT
directness: INDIRECT
evidence_source: OTHER
snippet: "There are now sufficient data in young children exposed to anticoagulant rodenticides to conclude that routine measurement of the international normalised ratio (INR) is unnecessary."
explanation: >-
States that the small unintentional paediatric ingestions which dominate
reported exposures do not need routine coagulation testing, the
counterweight to the 36 to 48 hour rule above. Marked indirect because it
is a recommendation for the class rather than a chlorophacinone finding.
- reference: PMID:17357377
reference_title: "Long-acting anticoagulant rodenticide poisoning: an evidence-based consensus guideline for out-of-hospital management."
supports: SUPPORT
directness: INDIRECT
evidence_source: OTHER
snippet: "Patients with unintentional ingestion of less than 1 mg of LAAR active ingredient can be safely observed at home without laboratory monitoring."
explanation: >-
The consensus out-of-hospital guideline puts a dose threshold on that
recommendation. Marked indirect because the guideline covers long-acting
anticoagulant rodenticides collectively.
- reference: PMID:17357377
reference_title: "Long-acting anticoagulant rodenticide poisoning: an evidence-based consensus guideline for out-of-hospital management."
supports: SUPPORT
directness: INDIRECT
evidence_source: OTHER
snippet: "Patients with unintentional ingestion of 1 mg or more of active ingredient and are asymptomatic should be evaluated for coagulopathy at 48-72 hours after exposure (Grade B)."
explanation: >-
Gives the graded recommendation and testing window above that threshold.
Marked indirect for the same class-level reason.
- reference: PMID:2729812
reference_title: "[Prolonged hypocoagulability following the ingestion of anticoagulant raticides]."
supports: SUPPORT
directness: INDIRECT
evidence_source: HUMAN_CLINICAL
snippet: "The duration of the abnormalities is unpredictable; the prothrombin time should therefore be checked 48 hours after stopping Vitamin K therapy to detect any recurrence."
explanation: >-
Names the test that catches the rebound this entry models: a prothrombin
time 48 hours after vitamin K is stopped. Marked indirect because the
eleven-patient Paris series pools chlorophacinone with bromadiolone and
warfarin.
- reference: PMID:2729812
reference_title: "[Prolonged hypocoagulability following the ingestion of anticoagulant raticides]."
supports: SUPPORT
directness: INDIRECT
evidence_source: HUMAN_CLINICAL
snippet: "The absence of early clinical signs probably explains the number of late admissions."
explanation: >-
Attributes late presentation to the silent latent phase. Marked indirect
because the series pools three anticoagulants.
- reference: PMID:16499407
reference_title: "Anticoagulant rodenticides."
supports: SUPPORT
directness: INDIRECT
evidence_source: OTHER
snippet: "In all other cases, the INR should be measured 36-48 hours post exposure."
explanation: >-
States the recommended timing of coagulation testing after exposure.
- reference: PMID:40974629
reference_title: "A retrospective analysis of 88 anticoagulant rodenticide poisoning cases: Characteristics and forensic implications."
supports: SUPPORT
directness: INDIRECT
evidence_source: HUMAN_CLINICAL
snippet: "The median latency period was 4 days (range: 1 ∼ 30)."
explanation: >-
Quantifies the delay between exposure and clinical presentation.
Marked indirect because the series pools anticoagulant rodenticides.
notes: >-
In young children with the small unintentional ingestions that dominate
reported exposures, routine INR measurement is considered unnecessary.
- name: Suspicion on unexplained prothrombin time prolongation
description: >-
Where no exposure is reported, the poisoning is found by suspecting it.
An unexplained prolonged prothrombin time is the trigger to send a
rodenticide assay.
evidence:
- reference: PMID:31857739
reference_title: "Superwarfarin (Long-Acting Anticoagulant Rodenticides) Poisoning: from Pathophysiology to Laboratory-Guided Clinical Management."
supports: SUPPORT
directness: INDIRECT
evidence_source: OTHER
snippet: "Superwarfarin poisoning should therefore be suspected in all patients with unexplained prolongation of prothrombin time, and can be confirmed by their detection in serum."
explanation: >-
States the diagnostic posture for this class of poisoning when the
history is absent. Marked indirect because the review addresses the
long-acting rodenticides collectively.
- name: Analytical confirmation of chlorophacinone
description: >-
Chlorophacinone is identified and quantified in plasma or serum by HPLC or
LC-MS/MS. Analytical confirmation is what distinguishes chlorophacinone
poisoning from the other anticoagulant rodenticides and from warfarin,
since the coagulation profile alone cannot.
evidence:
- reference: PMID:10216974
reference_title: "Toxicological management of chlorophacinone poisoning."
supports: SUPPORT
directness: DIRECT
evidence_source: HUMAN_CLINICAL
snippet: "A simple HPLC procedure for the determination of chlorophacinone in human plasma is reported for that purpose."
explanation: >-
Describes the analytical method by which chlorophacinone is confirmed in
human plasma.
- reference: PMID:39893780
reference_title: "Simultaneous quantification of eighteen therapeutic oral anticoagulants, rodenticides, and antiplatelet agents by LC-MS/MS and its application in post-mortem forensic cases."
supports: SUPPORT
directness: INDIRECT
evidence_source: OTHER
snippet: "The method was validated according to the FDA recommendations for all compounds, with an eight-min run time in human whole blood, the gold standard in toxicological forensic investigation."
explanation: >-
Reports the validation result for a panel whose eighteen analytes
include chlorophacinone, which is what allows the specific agent to be
named rather than inferred. Marked indirect because performance is
reported for all compounds together rather than for chlorophacinone
alone.
progression:
- phase: Latent
duration: 0 to 24 hours after exposure
notes: >-
Coagulation is still normal. Non-specific symptoms such as nausea may
occur. A normal coagulation panel drawn in this window excludes nothing.
evidence:
- reference: PMID:10216974
reference_title: "Toxicological management of chlorophacinone poisoning."
supports: SUPPORT
directness: DIRECT
evidence_source: HUMAN_CLINICAL
snippet: "The examination revealed excitation and nausea, with a normal prothrombin index (PI)."
explanation: >-
Eight hours after ingesting 1875 mg of chlorophacinone the prothrombin
index was still normal, which fixes the latent phase.
- phase: Coagulopathy onset
duration: about 1 to 4 days after exposure
notes: >-
Prothrombin time and INR rise as factor VII, the shortest-lived of the
affected factors, is depleted. Bleeding may begin. The reported median
latency to clinical presentation is four days.
evidence:
- reference: PMID:40974629
reference_title: "A retrospective analysis of 88 anticoagulant rodenticide poisoning cases: Characteristics and forensic implications."
supports: SUPPORT
directness: INDIRECT
evidence_source: HUMAN_CLINICAL
snippet: "The median latency period was 4 days (range: 1 ∼ 30)."
explanation: >-
Gives the interval from exposure to presentation. Marked indirect because
the series pools anticoagulant rodenticides.
- phase: Resolution with rebound
duration: weeks to months
notes: >-
Under vitamin K1 the coagulation profile corrects and relapses on each
withdrawal. Full normalization took seven weeks in the reported case.
Relapse here is the expected course, not a complication.
evidence:
- reference: PMID:3222685
reference_title: "[Prolonged anticoagulation following chlorophacinone poisoning]."
supports: SUPPORT
directness: DIRECT
evidence_source: HUMAN_CLINICAL
snippet: "Prothrombin time (and vitamin K dependent factors VII and X) finally normalized only 7 weeks after chlorophacinone ingestion."
explanation: >-
Fixes the duration of the resolution phase in a chlorophacinone
poisoning.
epidemiology:
- name: Registered field use in France
description: >-
Chlorophacinone's share of human poisoning is small and country-dependent,
because it tracks the compound's registration. In France it is one of only
two anticoagulants registered for field use, so it appears there far more
than in series from countries where the second-generation compounds
dominate.
evidence:
- reference: PMID:21171851
reference_title: "Prevalence of anticoagulant rodenticide poisoning in humans and animals in France and substances involved."
supports: SUPPORT
directness: INDIRECT
evidence_source: HUMAN_CLINICAL
snippet: "In wildlife, bromadiolone and chlorophacinone are by far the most important products, being the only ones registered for field use."
explanation: >-
States chlorophacinone's registration position in France, which is why
the human case literature clusters there.
- name: Exposure circumstances and severity
description: >-
Reported anticoagulant rodenticide exposures are dominated by young
children and are mostly accidental and clinically trivial. The severe cases
come from deliberate adult ingestion.
evidence:
- reference: PMID:21171851
reference_title: "Prevalence of anticoagulant rodenticide poisoning in humans and animals in France and substances involved."
supports: SUPPORT
directness: INDIRECT
evidence_source: HUMAN_CLINICAL
snippet: "Overall, the proportion of anticoagulant exposure reported to the Lyon poison control center appeared very limited and mostly occurred in young children, with no or very limited clinical severity."
explanation: >-
Characterizes the exposure population and its severity in the French
poison-centre data. Marked indirect because the figures cover
anticoagulant rodenticides collectively.
- reference: PMID:21171851
reference_title: "Prevalence of anticoagulant rodenticide poisoning in humans and animals in France and substances involved."
supports: SUPPORT
directness: INDIRECT
evidence_source: HUMAN_CLINICAL
snippet: "There is no report of mortality in the human data, and less than 1% of all exposure cases in domestic animals were fatal."
explanation: >-
Records the absence of deaths in four years of French human data, which
is the counterweight to the severity of the published case reports.
Marked indirect because agents are pooled.
- name: Reported burden in the United States
description: >-
United States poison-centre data for the long-acting anticoagulant
rodenticides as a class give the order of magnitude of reported exposure.
No chlorophacinone-specific incidence or prevalence figure exists.
evidence:
- reference: PMID:26239439
reference_title: "Long-Acting Anticoagulant Rodenticide (Superwarfarin) Poisoning: A Review of Its Historical Development, Epidemiology, and Clinical Management."
supports: SUPPORT
directness: INDIRECT
evidence_source: HUMAN_CLINICAL
snippet: "In the United States, on average, there were 10413 exposures reported with 2750 patients treated annually."
explanation: >-
Gives annual reported exposures and treated patients. Marked indirect
because the figure covers the long-acting class, not chlorophacinone.
- reference: PMID:26239439
reference_title: "Long-Acting Anticoagulant Rodenticide (Superwarfarin) Poisoning: A Review of Its Historical Development, Epidemiology, and Clinical Management."
supports: SUPPORT
directness: INDIRECT
evidence_source: HUMAN_CLINICAL
snippet: "Fortunately, only 2% of all exposures result in morbidity or mortality."
explanation: >-
Quantifies the proportion of reported exposures that matter clinically.
Marked indirect for the same class-level reason.
notes: >-
These are reported exposures, not diagnosed cases of poisoning, and they
cannot be separated by agent.
differential_diagnoses:
- name: Vitamin K-Dependent Coagulation Factor Deficiency
disease_term:
preferred_term: congenital vitamin K-dependent coagulation factors deficiency
term:
id: MONDO:0015722
label: congenital vitamin K-dependent coagulation factors deficiency
description: >-
Biallelic germline variants in VKORC1 or GGCX produce the same combined
deficiency of the vitamin K-dependent factors by disabling the same two
steps that chlorophacinone blocks pharmacologically.
distinguishing_features:
- Germline VKORC1 or GGCX variants are present and the presentation is lifelong rather than following a single exposure.
- No anticoagulant rodenticide is detectable on toxicological analysis.
- Skeletal and other extra-haemostatic features of GGCX deficiency have no counterpart in an acute poisoning.
notes: >-
The genetic counterpart of the acquired lesion here, so an unexplained
combined deficiency of the vitamin K-dependent factors should be worked up
against both.
- name: Warfarin or other coumarin anticoagulant
description: >-
Therapeutic warfarin, warfarin overdose, and the other coumarin oral
anticoagulants produce the same vitamin K antagonist coagulopathy through
the same enzyme.
distinguishing_features:
- A drug history and a therapeutic indication are usually present.
- Warfarin coagulopathy resolves within days of stopping the drug and responds to ordinary reversal doses of vitamin K, not to months of high-dose therapy.
- Analytical confirmation separates the compounds.
evidence:
- reference: PMID:26239439
reference_title: "Long-Acting Anticoagulant Rodenticide (Superwarfarin) Poisoning: A Review of Its Historical Development, Epidemiology, and Clinical Management."
supports: SUPPORT
directness: INDIRECT
evidence_source: OTHER
snippet: "Long-acting anticoagulant rodenticides have an extremely high affinity for VKOR compared with warfarin, characterized by rebound coagulopathy and bleeding after initial treatment and the need for high-dose, long-term therapy with vitamin K1."
explanation: >-
Contrasts the rodenticide course with warfarin's, which is the
distinguishing feature. Marked indirect because the review speaks for the
long-acting class.
- name: Liver failure
description: >-
Hepatic synthetic failure also depresses the vitamin K-dependent factors
and prolongs the prothrombin time.
distinguishing_features:
- Factor V is synthesized in the liver but is not vitamin K dependent, so it is reduced in liver failure and unaffected by a vitamin K antagonist. This factor V versus factor VII pattern is the standard discriminator; no source cited in this entry reports it, so it is recorded as clinical convention rather than curated as evidenced content.
- Other markers of hepatic failure, such as bilirubin, albumin and transaminases, are deranged.
- The coagulopathy of liver failure does not correct on high-dose vitamin K1 and does not rebound on its withdrawal.
- name: Disseminated intravascular coagulation
description: >-
Consumptive coagulopathy also prolongs the prothrombin time and causes
multi-site bleeding.
distinguishing_features:
- Platelet count and fibrinogen are low and D-dimer is raised in disseminated intravascular coagulation; a vitamin K antagonist leaves the platelet count and fibrinogen untouched.
- A precipitating illness such as sepsis, malignancy or obstetric catastrophe is present.
- Recorded as clinical convention. No source cited in this entry reports these discriminating values.
- name: Other anticoagulant rodenticide poisoning
description: >-
Brodifacoum, bromadiolone, difenacoum, difethialone, flocoumafen and
coumatetralyl produce a clinically indistinguishable coagulopathy through
the same target. In pooled case series brodifacoum and bromadiolone are the
agents most often identified.
distinguishing_features:
- Only analytical confirmation separates the agents; the coagulation profile does not.
- The second-generation compounds persist far longer, so treatment courses run months rather than weeks.
evidence:
- reference: PMID:40974629
reference_title: "A retrospective analysis of 88 anticoagulant rodenticide poisoning cases: Characteristics and forensic implications."
supports: SUPPORT
directness: INDIRECT
evidence_source: HUMAN_CLINICAL
snippet: "About the types of rodenticides, a total of 38 cases reported 7 distinct types, with brodifacoum and bromadiolone being the most common"
explanation: >-
Establishes that several agents in this class present the same way and
that the commonest identified are not chlorophacinone. Marked indirect
because the sentence is about agent distribution rather than about
distinguishing them clinically.
animal_models:
- name: Accidental chlorophacinone poisoning in calves
species: Cattle
genotype: wild type
description: >-
Fourteen crossbred calves ingested chlorophacinone powder present in their
housing. Three were submitted for necropsy, with chlorophacinone confirmed
in liver at 2.9 to 4.2 ppm. This is a naturally occurring, dose-uncontrolled
veterinary poisoning rather than a designed experimental model, and it is
recorded here because it couples a confirmed chlorophacinone tissue burden
to a documented anatomical distribution of haemorrhage.
publication: PMID:35000500
evidence:
- reference: PMID:35000500
reference_title: "Acute hemorrhage and death in calves following chlorophacinone exposure."
supports: SUPPORT
directness: DIRECT
evidence_source: MODEL_ORGANISM
snippet: "Three calves were submitted to the Iowa State University Veterinary Diagnostic Laboratory for diagnostic evaluation following an abrupt increase in morbidity and mortality in a calf herd associated with epistaxis and widespread hemorrhage."
explanation: >-
Establishes the exposure event and the animals examined, which is what
this entry records as a naturally occurring chlorophacinone poisoning.
modeled_mechanisms:
- target: Multicompartment Hemorrhage
relationship: RECAPITULATES
fidelity: MODERATE
description: >-
Reproduces the multicompartment haemorrhage of human chlorophacinone
poisoning, with the same agent confirmed analytically in tissue.
limitations: >-
An uncontrolled accidental exposure in a ruminant, with no measured
ingested dose, no coagulation assays reported, and no treatment arm.
Bovine vitamin K handling and rumen microbial vitamin K synthesis differ
from human, so the dose-response cannot be carried across.
readouts:
- name: Chlorophacinone concentration in liver
target: Multicompartment Hemorrhage
direction: INCREASED
interpretation: >-
Confirms that the haemorrhage occurred against a measured
chlorophacinone tissue burden rather than a presumed exposure.
evidence:
- reference: PMID:35000500
reference_title: "Acute hemorrhage and death in calves following chlorophacinone exposure."
supports: SUPPORT
directness: DIRECT
evidence_source: MODEL_ORGANISM
snippet: "Significant concentrations of chlorophacinone were detected at 4.2, 3.6, and 2.9 ppm in liver."
explanation: >-
Reports the measured hepatic chlorophacinone concentrations.
evidence:
- reference: PMID:35000500
reference_title: "Acute hemorrhage and death in calves following chlorophacinone exposure."
supports: SUPPORT
directness: DIRECT
evidence_source: MODEL_ORGANISM
snippet: "Acute hemorrhage and death occurred in fourteen 1.5-mo-old, crossbred calves following ingestion of the vitamin K antagonist chlorophacinone."
explanation: >-
Attributes acute haemorrhage and death to chlorophacinone ingestion,
which is what makes this exposure informative for the haemorrhage node.
- name: Accidental chlorophacinone poisoning in lambs
species: Sheep
genotype: wild type
description: >-
Eleven lambs reached old bait placed between the wall studs of their
housing through a hole in the plywood. Two were necropsied, with
chlorophacinone confirmed in liver at 0.58 and 0.50 ppm. A second species
with a confirmed chlorophacinone tissue burden, and the source of the
tempo: these animals died within one to two hours of the first sign.
publication: PMID:17037620
evidence:
- reference: PMID:17037620
reference_title: "Chlorophacinone exposure causing an epizootic of acute fatal hemorrhage in lambs."
supports: SUPPORT
directness: DIRECT
evidence_source: MODEL_ORGANISM
snippet: "The anticoagulant chlorophacinone was detected in the livers at 0.58 ppm and 0.50 ppm (wet weight), respectively."
explanation: >-
Confirms chlorophacinone analytically in the affected animals, which is
what makes this exposure informative rather than presumptive.
modeled_mechanisms:
- target: Multicompartment Hemorrhage
relationship: RECAPITULATES
fidelity: MODERATE
description: >-
Reproduces multicompartment haemorrhage with epistaxis as the presenting
sign, in a second ruminant species and at liver concentrations roughly
sixfold below the calf series.
limitations: >-
An uncontrolled accidental exposure with no measured ingested dose, no
coagulation assays, and no treatment arm. The liver concentrations differ
sixfold from the calf epizootic, and age, species and dose timing all
differ, so no lethal threshold can be derived from the pair. The
centrilobular hepatocellular necrosis reported at necropsy is most
parsimoniously hypoxic in an exsanguinating animal and is deliberately
not curated as chlorophacinone hepatotoxicity. Ovine vitamin K handling,
including rumen microbial synthesis, differs from human.
readouts:
- name: Time from first clinical sign to death
target: Multicompartment Hemorrhage
direction: DECREASED
interpretation: >-
Records how fast the haemorrhagic phase can run once it declares
itself in a heavily exposed animal.
evidence:
- reference: PMID:17037620
reference_title: "Chlorophacinone exposure causing an epizootic of acute fatal hemorrhage in lambs."
supports: SUPPORT
directness: DIRECT
evidence_source: MODEL_ORGANISM
snippet: "Affected animals died within 1-2 hours from the onset of clinical signs."
explanation: >-
Reports the interval measured in the affected lambs.
evidence:
- reference: PMID:17037620
reference_title: "Chlorophacinone exposure causing an epizootic of acute fatal hemorrhage in lambs."
supports: SUPPORT
directness: DIRECT
evidence_source: MODEL_ORGANISM
snippet: "Eleven lambs, approximately 1-2 months of age, suddenly developed epistaxis, respiratory distress, and facial and cervical swelling."
explanation: >-
Documents the presenting haemorrhagic syndrome attributed to
chlorophacinone in this epizootic.
discussions:
- discussion_id: protein_c_s_paradoxical_thrombosis
kind: KNOWLEDGE_GAP
prompt: >-
Does loss of gamma-carboxylation of the anticoagulant proteins C and S
explain the thrombotic events reported in anticoagulant rodenticide
poisoning?
attaches_to:
- "pathophysiology#Impaired Gamma-Carboxylation of Vitamin K-Dependent Clotting Factors"
rationale: >-
Proteins C and S are vitamin K-dependent substrates of the same hepatic
carboxylase as factors II, VII, IX and X, so a vitamin K antagonist
depletes anticoagulant and procoagulant proteins together. Thrombotic
events, including a fatal cerebral vein thrombosis reported as a suspected
chlorophacinone poisoning, occur in this class and are difficult to
reconcile with pure anticoagulation. No cited source here measures protein
C or protein S activity in a chlorophacinone poisoning, so the mechanism
is left as an open question rather than curated as a causal edge.
evidence:
- reference: PMID:16716547
reference_title: "Lethal paradoxical cerebral vein thrombosis due to suspicious anticoagulant rodenticide intoxication with chlorophacinone."
supports: SUPPORT
directness: DIRECT
evidence_source: HUMAN_CLINICAL
snippet: "The authors report a case of suspicious chlorophacinone poisoning with a problematic diagnosis."
explanation: >-
Reports a fatal thrombotic event in a chlorophacinone poisoning. The
paper's own wording is "suspicious" with a "problematic diagnosis", so
it is cited here as a case that raises the question, not as a settled
attribution.
- reference: PMID:26239439
reference_title: "Long-Acting Anticoagulant Rodenticide (Superwarfarin) Poisoning: A Review of Its Historical Development, Epidemiology, and Clinical Management."
supports: SUPPORT
directness: INDIRECT
evidence_source: HUMAN_CLINICAL
snippet: "Long-acting anticoagulant rodenticide-induced paradoxical thrombosis and thrombotic complications accompanying hemostatic therapy have also been observed."
explanation: >-
Confirms paradoxical thrombosis is observed across the class and
separates it from thrombosis caused by haemostatic therapy. Marked indirect
because it reports the observation without testing a mechanism.
- discussion_id: persistence_after_plasma_clearance
kind: KNOWLEDGE_GAP
prompt: >-
Why does chlorophacinone-induced hypocoagulability persist after plasma
chlorophacinone concentrations have fallen to low values?
attaches_to:
- "pathophysiology#Hepatic Accumulation and Prolonged Elimination"
rationale: >-
In a monitored human poisoning the hypocoagulability outlasted the
measurable plasma concentration. The treating authors offered two
candidate explanations, accumulation in target cells and an unidentified
active metabolite, and distinguished neither. Which of the two operates
determines whether plasma chlorophacinone concentration is a usable guide
to stopping vitamin K therapy.
proposed_experiments:
- experiment_id: chlorophacinone_metabolite_vs_compartment
name: Paired hepatic and plasma chlorophacinone measurement with metabolite profiling
description: >-
Measure chlorophacinone and its metabolites in plasma alongside INR
through the resolution phase of human poisonings, with untargeted
metabolite profiling, to determine whether a persisting parent compound
compartment or an active metabolite accounts for the residual effect.
evidence:
- reference: PMID:23109180
reference_title: "Bioaccumulation of chlorophacinone in strains of rats resistant to anticoagulants."
supports: SUPPORT
directness: INDIRECT
evidence_source: MODEL_ORGANISM
snippet: "Extensive metabolism of chlorophacinone was also found, and was similar (in nature and proportion of metabolites) across strains (3 OH-metabolites identified)."
explanation: >-
Three hydroxy-metabolites of chlorophacinone have been identified in rat,
so the metabolite arm of this question is not that no metabolite is known
but that none has been shown active in humans. Marked indirect because
the work is in rat.
- reference: PMID:23109180
reference_title: "Bioaccumulation of chlorophacinone in strains of rats resistant to anticoagulants."
supports: SUPPORT
directness: INDIRECT
evidence_source: MODEL_ORGANISM
snippet: "Accumulation of chlorophacinone occurs from day 1 to day 4, and an equilibrium is reached, suggesting rapid elimination."
explanation: >-
Cuts against the tissue-accumulation arm: hepatic chlorophacinone reaches
a plateau within four days in rat, which the authors read as rapid
elimination rather than indefinite retention. Marked indirect because the
work is in rat and because the human coagulopathy is what needs
explaining.
- reference: PMID:10216974
reference_title: "Toxicological management of chlorophacinone poisoning."
supports: SUPPORT
directness: INDIRECT
evidence_source: HUMAN_CLINICAL
snippet: "Chlorophacinone accumulation in target cells or existence of an unidentified metabolite may explain persistence of the hypocoagulability syndrome at low plasmatic concentrations of chlorophacinone."
explanation: >-
States the unresolved alternative explanations directly.
- discussion_id: first_generation_versus_long_acting
kind: INTERPRETATION
prompt: >-
Should chlorophacinone be curated as a first-generation anticoagulant
rodenticide or as a long-acting anticoagulant rodenticide?
rationale: >-
Two authoritative sources place chlorophacinone in opposite groups, and
both are right on their own terms. Watt and colleagues group it with the
long-acting rodenticides on human duration of effect. Esther and
colleagues list it with warfarin and coumatetralyl as first-generation,
which is a statement about rodent potency and the number of feeds needed
to kill a rat. "Generation" is a rodent-efficacy term and "long-acting" is
a human-toxicology term, so chlorophacinone is first-generation by potency
and long-acting by duration. The distinction matters clinically, because
the first-generation label wrongly implies a warfarin-length course of
treatment. This entry curates the human-toxicology reading and records the
conflict rather than resolving it silently.
evidence:
- reference: PMID:16499407
reference_title: "Anticoagulant rodenticides."
supports: SUPPORT
directness: DIRECT
evidence_source: OTHER
snippet: "This group includes the second generation 4-hydroxycoumarins brodifacoum, bromadiolone, difenacoum, flocoumafen and the indanedione derivatives chlorophacinone and diphacinone."
explanation: >-
Places chlorophacinone in the long-acting anticoagulant rodenticide
group.
- reference: PMID:24781908
reference_title: "[Rodenticide resistance and consequences]."
supports: SUPPORT
directness: DIRECT
evidence_source: OTHER
snippet: "Anticoagulants of the first generation (warfarin, chlorophacinone, coumatetralyl) as well as bromadiolone and difenacoum are not an option for the control of resistant Norway rats."
explanation: >-
Places chlorophacinone in the first-generation group, in a
rodent-control context.
- discussion_id: indandione_mitochondrial_uncoupling
kind: KNOWLEDGE_GAP
prompt: >-
Do indandione anticoagulants, chlorophacinone among them, uncouple
oxidative phosphorylation, and does that contribute to human toxicity
beyond the coagulopathy?
attaches_to:
- "pathophysiology#Systemic Chlorophacinone Exposure"
rationale: >-
Toxicology reference texts repeatedly describe the indandiones as
uncouplers of oxidative phosphorylation, a property the 4-hydroxycoumarins
are said to lack, and attribute cardiopulmonary and neurologic injury in
laboratory rodents to it. The claim is not curated here because no primary
source for it could be located: PubMed queries pairing chlorophacinone,
and separately indandione, diphacinone and pindone, with uncoupling,
mitochondria and oxidative phosphorylation returned no records. The gap is
recorded rather than the claim, because a widely repeated mechanism with
no retrievable primary citation is worth flagging. Note that
chlorophacinone does have a documented off-target activity, FXR
antagonism, cited below; the absent evidence is for uncoupling in
particular, not for off-target action in general.
proposed_experiments:
- experiment_id: chlorophacinone_mitochondrial_respirometry
name: Respirometry of isolated mitochondria exposed to chlorophacinone
description: >-
Measure oxygen consumption, membrane potential and ATP synthesis in
isolated hepatic and cardiac mitochondria across a chlorophacinone
concentration range spanning those reached in human poisoning, against a
4-hydroxycoumarin comparator and a known uncoupler control, to establish
whether the uncoupling property exists and at what concentration.
evidence:
- reference: PMID:27773686
reference_title: "Differential modulation of FXR activity by chlorophacinone and ivermectin analogs."
supports: SUPPORT
directness: INDIRECT
evidence_source: IN_VITRO
snippet: "Our results showed that chlorophacinone and ivermectin had distinct modes of action (MOA) in modulating FXR-coregulator interactions and compound selectivity against the four aforementioned functionally-relevant nuclear receptors."
explanation: >-
Chlorophacinone has a documented off-target activity, antagonism of the
nuclear receptor FXR in a validated screen. It is cited here so this gap
is not read as "chlorophacinone has no off-target activity"; what lacks a
primary source is uncoupling specifically. Marked indirect because the
assays are cell-based and the paper makes no claim about human poisoning.
notes: >-
The cited evidence item records a different off-target mechanism rather
than the uncoupling claim itself. No source is offered for uncoupling,
because that is the point of the entry: attaching a reference that does
not make the claim would defeat it.
- discussion_id: cyp_induction_transferability
kind: INTERPRETATION
prompt: >-
Does the published argument against using cytochrome P450 inducers in
long-acting anticoagulant rodenticide poisoning apply to chlorophacinone?
attaches_to:
- "pathophysiology#Hepatic Accumulation and Prolonged Elimination"
rationale: >-
This entry curates phenobarbital enzyme induction as a reported adjunct.
A published position argues against CYP inducers in this poisoning, but its
reasoning is specific to brodifacoum, which the authors state does not
undergo significant hepatic metabolism. Chlorophacinone does: three
hydroxy-metabolites have been identified and metabolism is described as
extensive in rat. The argument therefore does not obviously transfer, and
the two chlorophacinone reports that used phenobarbital are uncontrolled
single patients. Recorded as an open interpretation rather than settled
either way, because the safety objection about sedating a bleeding patient
stands regardless of the metabolism question.
evidence:
- reference: PMID:30689138
reference_title: "Should Cytochrome P450 Inducers be Used to Accelerate Clearance of Brodifacoum from Poisoned Patients?"
supports: SUPPORT
directness: INDIRECT
evidence_source: OTHER
snippet: "Therefore, we propose that CYP inducers should not be used to accelerate the clearance of brodifacoum from poisoned patients, but that alternative approaches such as reducing enterohepatic recirculation of brodifacoum, or using lipid emulsions to scavenge brodifacoum throughout the body, be considered."
explanation: >-
States the position being weighed, in full: the authors do not simply
reject enzyme induction, they redirect to interrupting enterohepatic
recirculation or scavenging the drug. Marked indirect because it is a
proposal about brodifacoum, not chlorophacinone.
- reference: PMID:30689138
reference_title: "Should Cytochrome P450 Inducers be Used to Accelerate Clearance of Brodifacoum from Poisoned Patients?"
supports: SUPPORT
directness: INDIRECT
evidence_source: OTHER
snippet: "unlike warfarin, brodifacoum does not undergo significant metabolism in the liver, nor have the effects of phenobarbital on vitamin K1 metabolism been previously determined"
explanation: >-
Gives the premise on which that position rests, which is the premise that
may not hold for chlorophacinone. Marked indirect for the same reason.
- reference: PMID:23109180
reference_title: "Bioaccumulation of chlorophacinone in strains of rats resistant to anticoagulants."
supports: SUPPORT
directness: INDIRECT
evidence_source: MODEL_ORGANISM
snippet: "Extensive metabolism of chlorophacinone was also found, and was similar (in nature and proportion of metabolites) across strains (3 OH-metabolites identified)."
explanation: >-
Chlorophacinone, unlike brodifacoum, is extensively metabolised, which is
why the argument may not transfer. Marked indirect because the work is in
rat.
references:
- reference: PMID:16499407
title: "Anticoagulant rodenticides."
- reference: PMID:26239439
title: "Long-Acting Anticoagulant Rodenticide (Superwarfarin) Poisoning: A Review of Its Historical Development, Epidemiology, and Clinical Management."
- reference: PMID:10216974
title: "Toxicological management of chlorophacinone poisoning."
- reference: PMID:2769823
title: "Chlorophacinone intoxication. A biological and toxicological study."
- reference: PMID:3222685
title: "[Prolonged anticoagulation following chlorophacinone poisoning]."
- reference: PMID:16716547
title: "Lethal paradoxical cerebral vein thrombosis due to suspicious anticoagulant rodenticide intoxication with chlorophacinone."
- reference: PMID:35000500
title: "Acute hemorrhage and death in calves following chlorophacinone exposure."
- reference: PMID:40974629
title: "A retrospective analysis of 88 anticoagulant rodenticide poisoning cases: Characteristics and forensic implications."
- reference: PMID:24781908
title: "[Rodenticide resistance and consequences]."
- reference: PMID:35970209
title: "VKORC1 single nucleotide polymorphisms in rodents in Spain."
- reference: PMID:21171851
title: "Prevalence of anticoagulant rodenticide poisoning in humans and animals in France and substances involved."
- reference: PMID:39893780
title: "Simultaneous quantification of eighteen therapeutic oral anticoagulants, rodenticides, and antiplatelet agents by LC-MS/MS and its application in post-mortem forensic cases."
- reference: PMID:31857739
title: "Superwarfarin (Long-Acting Anticoagulant Rodenticides) Poisoning: from Pathophysiology to Laboratory-Guided Clinical Management."
- reference: PMID:17357377
title: "Long-acting anticoagulant rodenticide poisoning: an evidence-based consensus guideline for out-of-hospital management."
- reference: PMID:2729812
title: "[Prolonged hypocoagulability following the ingestion of anticoagulant raticides]."
- reference: PMID:1522713
title: "Rapid high-performance liquid chromatographic assay of chlorophacinone in human serum."
- reference: PMID:23109180
title: "Bioaccumulation of chlorophacinone in strains of rats resistant to anticoagulants."
- reference: PMID:30689138
title: "Should Cytochrome P450 Inducers be Used to Accelerate Clearance of Brodifacoum from Poisoned Patients?"
- reference: PMID:32447894
title: "[A case of acute osteofascial compartment syndrome caused by rodenticide poisoning]."
- reference: PMID:27773686
title: "Differential modulation of FXR activity by chlorophacinone and ivermectin analogs."
- reference: PMID:17037620
title: "Chlorophacinone exposure causing an epizootic of acute fatal hemorrhage in lambs."
- reference: PMID:32645465
title: "Accidental chlorophacinone exposure of lactating ewes: Clinical follow-up and human health dietary implications."
- reference: PMID:29897553
title: "The Bile Sequestrant Cholestyramine Increases Survival in a Rabbit Model of Brodifacoum Poisoning."
Deep research results are used as seeds for research; they do not undergo the same validation as the main records and may contain errors. How we use deep research.
Create: Chlorophacinone Poisoning · 2026-09-03T18:51:47Z · View source
Created kb/disorders/Chlorophacinone_Poisoning.yaml de novo. Chlorophacinone is an indanedione anticoagulant rodenticide; the entry models the acquired vitamin K-antagonist coagulopathy it causes. No MONDO term exists. MONDO was searched live through OLS4 for chlorophacinone, indandione, anticoagulant rodenticide and rodenticide poisoning, and the 60 hierarchical children of MONDO:0029000 (poisoning) were enumerated; none covers rodenticides or anticoagulants. The entry therefore carries no primary disease_term and records only a skos:broadMatch to MONDO:0029000, with the reasoning in the entry notes. A new MONDO term request is the correct follow-up. Deep research. The user asked for Edison falcon. The falcon provider could not run: EDISON_API_KEY from .env is rejected with HTTP 403 Forbidden at https://api.platform.edisonscientific.com/auth/login (edison_client raises "Failed to authenticate"). The key is well formed, 235 characters, unquoted, no whitespace, so this is a server-side credential rejection and not a local configuration fault. Two attempts were made. Deep research was therefore run with the claude_code provider instead, producing research/Chlorophacinone_Poisoning-deep-research-claude_code.md (798 s, 16 web searches, 58 turns). Report validation, per the skill's Step 3a. The report's own frontmatter records needs_review: true, 48 references checked, 47 resolved, 1 unresolved (PMID:34748846), confabulation_rate 0.021, 31 of 47 on topic, 0 off topic; term validation 45/45 resolved. PMID:34748846 is NOT cited anywhere in this entry. The six terms the validator lists as "named as a different term" are a report formatting artifact: the report wrote the string "not verified this session" in the label column rather than a wrong label. HP:0000132 (Menorrhagia) and HP:0001903 (Anemia) are used here and both were independently confirmed against the local HPO adapter. NEC check. just preflight-dr cannot run without a MONDO ID. The manual substitute was a gene- and agent-frequency count over the report body: 124 mentions of chlorophacinone against 16 brodifacoum, 15 bromadiolone, 29 warfarin (mostly as the comparator), and 25 VKORC1. The report is about the intended entity. Curated content. Nine pathophysiology nodes forming a connected chain from systemic exposure through VKORC1 inhibition, reduced-vitamin-K depletion, failed gamma-carboxylation, functional factor II/VII/IX/X deficiency, prolonged coagulopathy and multicompartment haemorrhage to hypovolaemic shock and death, with hepatic accumulation and prolonged elimination as a parallel branch feeding the coagulopathy node. 19 phenotypes, 2 biochemical markers, 1 environmental exposure (ECTO:9002177) linked into the pathograph, 3 treatments, 3 diagnosis entries, 3 progression phases, 3 epidemiology entries, 5 differential diagnoses, 2 animal models, 5 discussions, 109 evidence items over 22 references. Connectivity was checked programmatically: no pathophysiology node lacks an incoming edge, and every downstream, influences_mechanisms, target_mechanisms, modeled_mechanisms, readout and attaches_to target resolves. Evidence discipline. Every snippet was pre-verified against the local references_cache before being written into YAML, using a whitespace-normalizing substring check, so no blocked write or re-emission was needed. Every reference_title was extracted programmatically from the cache title: line and re-checked against the cache after all edits; all 22 match, and the set of cited PMIDs equals the set listed in the top-level references block. Class-level evidence and the directness slot. Most of the anticoagulant rodenticide literature reports the class rather than chlorophacinone. Note that the schema no longer accepts supports: PARTIAL, which CLAUDE.md still documents; supports is direction only and directness carries the inference step. One rule was applied to every one of the 109 items and no item is left untagged: INDIRECT where the quoted sentence is about the class rather than chlorophacinone, or comes from a non-human system, or is a therapeutic recommendation used as mechanism evidence; DIRECT where the sentence names chlorophacinone or the specific case and asserts the claim. That yields 75 INDIRECT and 34 DIRECT. For evidence_source in reviews and guidelines the rule is OTHER for pharmacological assertions and management recommendations, HUMAN_CLINICAL for aggregated patient observations. An automated audit confirms no snippet carries two different tag combinations anywhere in the file. Adversarial self-review before the PR. A subagent review against the dismech-pr-review skill returned five blocking and six high findings; all were acted on. The frequency: FREQUENT band on Hematuria was removed, since 39 of 88 comes from a case-report synthesis enriched for severe outcomes and the entry's own epidemiology records about 2 per cent morbidity across reported exposures; the sources support a rank, not a rate. The directness and evidence_source inconsistencies described above were the review's other two blocking findings and were fixed by the whole-file retag. Two chlorophacinone-specific papers already in this branch's cache but uncited were brought in: PMID:1522713, twenty poisoned patients and the only source giving a serum concentration below which bleeding risk has resolved, and PMID:23109180, which identifies three hydroxy-metabolites in rat and reports a hepatic plateau suggesting rapid elimination, both of which bear directly on the persistence discussion and one of which cuts against it. Also added on review: the lamb epizootic (PMID:17037620) as a second animal model, three missing differentials (warfarin/coumarin, liver failure, disseminated intravascular coagulation), the consensus out-of-hospital guideline (PMID:17357377), the Paris series recommendation to recheck the prothrombin time 48 hours after stopping vitamin K (PMID:2729812), coma and acute compartment syndrome as phenotypes, milk transfer as an exposure route, and an INTERPRETATION discussion on whether the published argument against CYP inducers, which rests on brodifacoum not being metabolised, transfers to a compound that is. The 39893780 snippet was swapped from an aims sentence to the paper's validation result, and the 16716547 snippet from an "the authors discuss" sentence to the one reporting the case; the thrombosis discussion no longer says the death was attributed to chlorophacinone, since that paper calls the diagnosis suspicious and problematic. The factor VII half-life ordering is retained but now carries a note saying it is standard coagulation physiology not demonstrated in any cited source. Curation-process narrative was trimmed out of the rendered notes fields and lives here instead. Post-review round on PR #10782. The ai4c-reviewer approved with no critical or important findings and three optional suggestions; all three were acted on. The frequency-band cleanup had landed on the wrong occurrence of a snippet that appears on two blocks, so the corrected wording sat on the Multicompartment Hemorrhage node while the Hematuria phenotype kept prose still arguing for the removed FREQUENT band. Both explanations were rewritten to speak to their own block. NCIT:C208347 (Four-factor Prothrombin Complex Concentrate) was bound as therapeutic_agent on the factor-replacement treatment, with a note recording that recombinant activated factor VII and fresh frozen plasma are named in the same recommendation and are deliberately left unbound because no suitable term was resolved. PMID:29897553 (cholestyramine in a rabbit brodifacoum model), already cited in prose on the hepatic-accumulation node, was added to the top-level references block. Activated charcoal and antifibrinolytics were NOT curated: the reviewer independently confirmed that both appear only in PMID:16499407's MeSH keywords and never in its abstract body, so no exact-quote snippet exists for either. Deliberate omissions, recorded in the entry notes so they are not re-attempted. HP:4000177 (Bleeding ameliorated by vitamin K) fits this disorder but descends from HP:0012823 Clinical modifier rather than HP:0000118, so it is outside the PhenotypeTerm dynamic enum; it was tried and removed. HP:0045063 (Increased PIVKA-II) is mechanistically apt but no cited source here reports PIVKA-II measurement in chlorophacinone poisoning, and the PIVKA-antigen clause that had been asserted in a node description was removed for the same reason. No datasets block: no omics or perturbation dataset for chlorophacinone exposure was found, only wildlife and livestock residue chemistry, which measures the compound rather than a host response. A VKORC1 or CYP2C9 pharmacogenomic susceptibility claim was NOT curated; it is mechanistically plausible but every available citation is a warfarin study. An unevidenced claim that vitamin K1 works by way of a warfarin-insensitive quinone reductase was written into a treatment description and then removed, because nothing cited here states it. The class-level clauses about greater VKOR affinity are explicitly not carried over onto the chlorophacinone node, because the same entry records that rodent-efficacy sources call it first-generation, which is a lower-potency claim. Discussions. Two knowledge gaps: whether loss of the vitamin K-dependent anticoagulants protein C and protein S explains the reported paradoxical thrombosis, and why hypocoagulability persists after plasma chlorophacinone falls. Two interpretation entries: chlorophacinone is called first-generation by rodent-efficacy sources and long-acting by human-toxicology sources, with the verbatim quote for each, because the first-generation label wrongly implies a warfarin-length treatment course; and whether the anti-CYP-inducer argument transfers. One knowledge gap on the widely repeated claim that indandiones uncouple oxidative phosphorylation, for which PubMed queries pairing chlorophacinone, indandione, diphacinone and pindone with uncoupling, mitochondria and oxidative phosphorylation returned no records; it carries the FXR-antagonism paper (PMID:27773686) so the entry is not read as claiming chlorophacinone has no off-target activity at all. Validation actually run and read. just validate (schema, terms, references) and just validate-disorders, the batched form CI runs: schema clean, terms passed, 109/109 snippets verified against cached references. just check-duplicate-keys, just check-entity-refs (2832 files), just check-title-snippets, just check-folded-hyphens: all pass. just compliance: 96.6% global, 97.0% weighted. Term validation genuinely consulted the ontologies, confirmed by new rows appearing in cache/chebi, cache/ecto, cache/go and cache/hgnc terms.csv and in four cache/enums membership files. uv run pytest tests/test_data.py against the final file state: 47829 passed.
Prepared: 2026-09-03. Target entry: kb/disorders/Chlorophacinone_Poisoning.yaml (currently an 18-line stub). Category: Environmental.
A note before the content. The human literature on chlorophacinone specifically is thin. PubMed returns 109 records for the term overall, and most are ecotoxicology, analytical chemistry, or rodent-resistance work. The number of published human chlorophacinone cases with individual clinical detail is in the single digits. Nearly every strong clinical statement below therefore comes from the anticoagulant rodenticide class literature, where brodifacoum and bromadiolone dominate the case material. I have marked class-level inference wherever it occurs. Do not let a class citation become a chlorophacinone claim in the entry.
Chlorophacinone poisoning is an acquired, toxin-induced coagulopathy. Chlorophacinone is an indanedione anticoagulant rodenticide. It inhibits vitamin K epoxide reductase in the hepatocyte, which halts regeneration of reduced vitamin K, which halts gamma-carboxylation of coagulation factors II, VII, IX and X. The clinical result is a functional deficiency of those factors and a bleeding diathesis. Onset is delayed by days. Duration is measured in weeks.
The compound was introduced in the mid-1960s by Lipha SA of France. It is used against rats, mice, voles and prairie dogs, in bait and as a tracking powder.
| Field | Value | Source |
|---|---|---|
| Name | chlorophacinone | |
| Systematic | 2-[(4-chlorophenyl)(phenyl)acetyl]-1H-indene-1,3(2H)-dione | |
| CAS | 3691-35-8 | NPIC / EPA |
| Formula | C23H15ClO3 | PubChem CID 19402 |
| MW | 374.8 g/mol (some sources give 364.8; see caveat) | |
| CHEBI | CHEBI:81796 (label: chlorophacinone) |
OLS4, verified |
| PubChem CID | 19402 | verified |
Caveat on molecular weight. One search result reported 364.8 for C23H15ClO3. The formula computes to roughly 374.8. Verify against PubChem directly before curating a number. I did not resolve this; the PubChem page did not render through the fetch tool.
There is no MONDO term for chlorophacinone poisoning, and none for anticoagulant rodenticide poisoning. I searched MONDO through OLS4 for rodenticide poisoning, poisoning by rodenticide, and poisoning. The third returned 32 terms. None covers rodenticides, coumarins, warfarin, or anticoagulants.
| Resource | Value | Status |
|---|---|---|
| MONDO | MONDO:0029000 poisoning |
Only available anchor. A skos:broadMatch at best. A new MONDO term request is the correct move. |
| ICD-10-CM | T60.4X- Toxic effect of rodenticides | Not independently verified against the ICD browser this session |
| ICD-11 | NE61 (toxic effect of pesticides) family | Not verified |
| MeSH | Rodenticides (D012377), Indans, Anticoagulants, Vitamin K 1. Cached PubMed records for chlorophacinone cases index under Indans/blood, poisoning and Rodenticides/poisoning |
Verified in references_cache/PMID_10216974.md |
| OMIM | Not applicable. Not a genetic disease. | |
| Orphanet | No ORPHA term found for this concept |
Because ICD-10-CM T60.4 is not specific to chlorophacinone, electronic health record case-finding cannot separate this entity from brodifacoum, bromadiolone or bromethalin exposure without a toxicology result. That is a real constraint on any EHR-derived phenotype algorithm.
Chlorophacinone is repeatedly described as a first-generation anticoagulant, and equally repeatedly grouped with the long-acting anticoagulant rodenticides / superwarfarins. Both usages appear in authoritative sources. Watt et al. put it squarely in the long-acting group (PMID:16499407, verbatim): "This group includes the second generation 4-hydroxycoumarins brodifacoum, bromadiolone, difenacoum, flocoumafen and the indanedione derivatives chlorophacinone and diphacinone." Meanwhile EPA and pest-control sources call it a first-generation multiple-feed anticoagulant, and Esther et al. list it with warfarin and coumatetralyl as first-generation (PMID:24781908, verbatim): "Anticoagulants of the first generation (warfarin, chlorophacinone, coumatetralyl) as well as bromadiolone and difenacoum are not an option for the control of resistant Norway rats."
The conflict is real, not an error in one source. "Generation" is a rodent-efficacy term. "Long-acting" is a human-toxicology term. Chlorophacinone is first-generation by rodent potency and long-acting by human duration of effect. Curate that distinction explicitly, because it changes clinical expectation.
Aggregated, not per-patient. Poison-center registries (America's Poison Centers NPDS, French PCC data in PMID:21171851), forensic case series (PMID:40974629), and individual published case reports. No disease registry exists. No EHR cohort study specific to chlorophacinone was found.
A single environmental cause: ingestion, and less often inhalation or dermal absorption, of chlorophacinone. The compound is the sufficient cause. There is no genetic disease here.
King and Tran, on routes (PMID:26239439, verbatim): "Inhalational, transcutaneous, and oral routes of exposure have been documented. Most exposures are unintentional."
Documented exposure circumstances:
Ecological terms (ECTO) for these routes were not searched this session. exposure to rodenticide and exposure to chemical via ingestion are the shapes to look for. Bind nothing you have not resolved.
Environmental and behavioral. Age under 6 years is the leading risk factor for exposure by count. King and Tran report that across 25 years of US poison-center data "there were 315951 exposures reported with nearly 90% among children" (PMID:26239439, verbatim). Berny et al. found French exposures "mostly occurred in young children, with no or very limited clinical severity" and that circumstances were "predominantly accidental in man (77%)" (PMID:21171851, verbatim).
Other environmental risk factors: agricultural and rural residence where field use is permitted, occupational pest control, psychiatric illness and suicidality, and access to stored bait. The lamb and calf epizootics both trace to old or spilled bait left accessible (PMID:17037620, PMID:35000500).
Host factors, likely but not demonstrated for chlorophacinone. Pre-existing liver disease, baseline vitamin K deficiency, malabsorption, concurrent warfarin or direct oral anticoagulant therapy, antibiotic-induced gut flora suppression, and low dietary vitamin K intake should all amplify the coagulopathy. I found no study testing any of these against chlorophacinone. Curate them as inference or not at all.
Genetic risk factors in humans. None established. This is a place where a plausible story could be curated into the entry incorrectly, so state the reasoning. Human VKORC1 (hgnc:23663) promoter variant -1639G>A (rs9923231) and CYP2C9 (hgnc:2623, not verified this session) star alleles govern warfarin dose requirement. It is mechanistically reasonable that VKORC1 haplotype modulates sensitivity to chlorophacinone, since the drug target is the same enzyme. I found no study demonstrating this. Do not curate a VKORC1 pharmacogenomic risk claim for chlorophacinone with a warfarin citation. That is the Named Entity Confusion failure in a different coat.
Note also that chlorophacinone is not known to be a CYP2C9 substrate in the way warfarin is, so the CYP2C9 analogy is weaker still.
Genetic factors in rodents, which are real and well documented. These are resistance, not human risk, and belong in the entry as target-species biology. See §4 and §14.
King and Tran on outcome (PMID:26239439, verbatim): "Fortunately, only 2% of all exposures result in morbidity or mortality."
In humans: not demonstrated. In target and non-target rodents: the central story of the field. Vkorc1 coding variants reduce chlorophacinone binding and produce survival on lethal bait. Bermejo-Nogales et al. (PMID:35970209, verbatim): "Computational analysis of binding predictions found out that the brown rat S149I mutation predicted a high reduction of the binding affinity of chlorophacinone and brodifacoum ARs." That evidence is COMPUTATIONAL in the docking part and MODEL_ORGANISM in the sequencing part. Split the evidence items.
The phenotype is a bleeding diathesis with a latent period. Category assignments below follow the dismech convention (Clinical, Laboratory).
The best available frequency data is class-level, from the 88-case forensic synthesis (PMID:40974629). Verbatim: "Multi-organ hemorrhage was the predominant clinical manifestation, with hematuria being the most frequently reported symptom (n = 39)." That is 39 of 88, roughly 44 percent, in a series enriched for severe and fatal cases. It is not a population frequency and must not be curated as one. measure_type reasoning applies: this is a case-series proportion in a selected sample.
| Phenotype | HPO term | ID | Notes |
|---|---|---|---|
| Hematuria | Hematuria | HP:0000790 | Most frequently reported bleeding site in the class series (PMID:40974629, PMID:26239439). Documented in the fatal chlorophacinone case (PMID:16716547, MeSH Hematuria/chemically induced) |
| Epistaxis | Epistaxis | HP:0000421 | Listed by Watt et al.; the presenting sign in the lamb epizootic |
| Gingival bleeding | Gingival bleeding | HP:0000225 | Watt et al. |
| Bruising / ecchymoses | Subcutaneous hemorrhage | HP:0001933 | "widespread bruising" (PMID:16499407) |
| Gastrointestinal hemorrhage | Gastrointestinal hemorrhage | HP:0002239 | |
| Rectal bleeding | Hematochezia | HP:0002573 | |
| Intracranial hemorrhage | Intracranial hemorrhage | HP:0002170 | The leading cause of death. Verbatim (PMID:26239439): "Deaths were most commonly associated with intracranial hemorrhage." |
| Subarachnoid hemorrhage | Subarachnoid hemorrhage | HP:0002138 | Documented in the fatal chlorophacinone case (PMID:16716547) |
| Menorrhagia | Menorrhagia | HP:0000132 (not verified this session) | |
| Hematoma | Internal hemorrhage | HP:0011029 | Use for haemorrhage into internal organs |
| Anemia | Anemia | HP:0001903 (not verified this session) | "anaemia may result" (PMID:16499407) |
| Abnormal bleeding, general | Abnormal bleeding | HP:0001892 | Parent term |
| Bleeding responsive to vitamin K | Bleeding ameliorated by vitamin K | HP:4000177 | A genuinely apt term. It exists. Verified in OLS4. |
| Flank pain | (search HP for flank pain; not verified) |
"haematuria with flank pain" (PMID:16499407) | |
| Coma | Coma | HP:0001259 (not verified) | Terminal. MeSH Coma/chemically induced on PMID:16716547 |
| Hypovolemic shock | (not verified) | "Severe blood loss may result in hypovolaemic shock, coma and death" (PMID:16499407) | |
| Cerebral venous thrombosis | Cerebral venous thrombosis (not verified) | The paradoxical presentation. See below. |
| Finding | HPO term | ID | Data |
|---|---|---|---|
| Prolonged prothrombin time | Prolonged prothrombin time | HP:0008151 | Median PT 100 s (range 11.6 to 300) in 88 cases (PMID:40974629) |
| Prolonged aPTT | Prolonged partial thromboplastin time | HP:0003645 | Median aPTT 110 s (range 3.71 to 212) (PMID:40974629) |
| Elevated INR | (no clean HP term; use HP:0008151) |
Median INR 9, range 0.98 to 38.2 (PMID:40974629) | |
| Increased PIVKA-II | Increased PIVKA-II | HP:0045063 | Under-used. Mechanistically the most specific marker available. |
| Reduced factor X activity | Reduced factor X activity | HP:0008321 | Vogel et al. tracked factors VII and X (PMID:3222685) |
Verbatim on the coagulation panel (PMID:40974629): "Coagulation function tests revealed average values of aPTT, PT, and INR of aPTT: 110 (3.71 ∼ 212) s, PT: 100 (11.6 ∼ 300) s and INR: 9 (0.98 ∼ 38.2), respectively, all significantly exceeding normal ranges." Note that snippet is list-shaped, carries three separate measurements, and would support three distinct claims. Split it if you use it more than once, and check what each node actually consumes.
King and Tran, verbatim: "Most patients present with coagulation assay values beyond measurable limits."
A patient anticoagulated by a vitamin K antagonist can thrombose. Protein C and protein S are also vitamin K dependent and have shorter half-lives than factors II, IX and X, so early in the exposure the anticoagulant pathway falls before the procoagulant pathway does. That mechanism is standard for warfarin-induced skin necrosis. Papin et al. report the chlorophacinone instance, and their title states the finding: "Lethal paradoxical cerebral vein thrombosis due to suspicious anticoagulant rodenticide intoxication with chlorophacinone" (PMID:16716547). The abstract itself is short and does not state the protein C mechanism. Verbatim, all it says is: "They review the literature and discuss particularities of anticoagulant rodenticide intoxication, as well as the apparent contradiction between anticoagulant intoxication and lethal thrombosis."
That abstract cannot carry a protein C claim. King and Tran independently confirm the phenomenon at class level, verbatim: "Long-acting anticoagulant rodenticide-induced paradoxical thrombosis and thrombotic complications accompanying hemostatic therapy have also been observed." Use that for the phenomenon and find a separate source for the protein C explanation, or mark it inferred.
No EQ-5D, SF-36 or PROMIS data exists for this condition. Not measured. The functional burden is dominated by prolonged hospitalization, months of daily vitamin K, and repeated coagulation monitoring. Treatment courses in the class averaged 168 days (PMID:26239439). That figure is class-level and driven by brodifacoum. Chlorophacinone courses are shorter. Do not transfer it.
No causal human gene. This is an acquired toxic condition. The genetics in this entry are of three other kinds.
VKORC1, vitamin K epoxide reductase complex subunit 1. HGNC hgnc:23663, verified in use at kb/disorders/Vitamin_K_Dependent_Coagulation_Factor_Deficiency.yaml:181. Enzyme activity term: GO:0047057 vitamin-K-epoxide reductase (warfarin-sensitive) activity (verified via OLS4). The warfarin-insensitive paralog activity is GO:0047058, corresponding to VKORC1L1.
The downstream carboxylase is GGCX, gamma-glutamyl carboxylase, HGNC hgnc:4247, likewise already bound in the sibling entry. Its process term is GO:0017187 peptidyl-glutamic acid carboxylation.
Biallelic VKORC1 variants cause vitamin K-dependent coagulation factor deficiency type 2, and biallelic GGCX variants cause type 1. That entry already exists in this knowledge base as Vitamin_K_Dependent_Coagulation_Factor_Deficiency. It is the key genetic differential for an unexplained multi-factor deficiency, and it should be cross-linked. Distinct VKORC1 missense variants cause hereditary warfarin resistance.
This is the substantive genetic content of the topic.
Esther et al. (PMID:24781908, verbatim): "Polymorphisms in the vitamin K epoxide reductase complex subunit 1 (VKORC1) gene and respective substitutions of amino acids in the VKOR enzyme are the major cause for rodenticide resistance. Resistant Norway rats in Germany are characterized by the Tyr139Cys genotype, which is spread throughout the northwest of the country."
Bermejo-Nogales et al. (PMID:35970209, verbatim): "We identified genotypic vkorc1 variations corresponding to amino acid changes at the VKORC1 protein at the S149I - S149T and the E155K - E155Q mutations, depending on the rodent species."
Known resistance substitutions relevant to chlorophacinone:
| Species | Variant | Effect on chlorophacinone | Evidence class |
|---|---|---|---|
| Rattus norvegicus | Tyr139Cys | Resistance; chlorophacinone not recommended | MODEL_ORGANISM (PMID:24781908) |
| Rattus norvegicus | Ser149Ile | Predicted large reduction in chlorophacinone binding affinity | COMPUTATIONAL (PMID:35970209) |
| Rattus rattus | Ser149Thr, Glu155Lys, Glu155Gln | Slight reduction for bromadiolone; chlorophacinone not the reported target | COMPUTATIONAL (PMID:35970209) |
| Mus musculus | Tyr139Cys, Leu128Ser, spretus-type quadruple (Arg12Trp/Ala26Ser/Ala48Thr/Arg61Leu) | Resistance | MODEL_ORGANISM (PMID:24781908) |
There is direct in-vivo dose-response work on Y139C house mice (PMID:36181415, Pest Manag Sci, 2022): "Anticoagulant rodenticide blood-clotting dose-responses and resistance factors for Tyrosine139Cysteine (Y139C) heterozygous- and homozygous-resistant house mice (Mus musculus)". I did not retrieve its abstract. Fetch it before citing a resistance factor number.
Not applicable. No ClinVar entries. No gnomAD frequencies relevant. No somatic component. No epigenetic mechanism reported. No chromosomal abnormality.
Chlorophacinone is the environmental factor. Everything in this section is exposure characterization.
Formulation and use. Grain-based ready-to-use baits at 0.005 to 0.25 percent active ingredient, plus tracking powder. Rozol Prairie Dog Bait, used in the raptor study, is 0.005 percent (PMID:35633457, verbatim: "Rozol, 0.005% active ingredient chlorophacinone, CPN").
Persistence, and the fact that distinguishes chlorophacinone from the superwarfarins. Chlorophacinone is markedly less persistent in tissue than bromadiolone or brodifacoum. A 2021 stereochemistry study (PMID:33130091) reports bromadiolone with a hepatic half-life of roughly 10 to 30 days against chlorophacinone at roughly one day in voles. I have that only through a fetch summary, not from the verbatim abstract, so treat the quoted fragment as unverified until refetched. In black-tailed prairie dogs, peak liver residue reached 5.499 mg/kg at day 3 with an estimated half-life near 6 days (PMID:25997570). Same caveat: summary, not verified quote.
Milk transfer. Verbatim (PMID:32645465): "Chlorophacinone was detected in milk on day 2 post-exposure and remained quantifiable for at least 7 days in milk of these 11 ewes. Concentrations in milk were much lower than in plasma and decreased quickly (mean half-life of 2 days)." Their conclusion, verbatim: "consumption of dairy products derived from these ewes after a one-week withdrawal period would pose low risk to consumers."
Non-target environmental burden. Chlorophacinone appears in wild raptors and mammals. In south-eastern France over 12 years, first-generation compounds were the minority. Verbatim (PMID:34748846): "While SGARs were commonly detected (97.4% of positive samples), first-generation ARs were rarely found (7.7% of positive samples)." And the trend, verbatim: "While chlorophacinone exposure decreased over time, an increasing exposure trend was observed for the SGAR brodifacoum, suggesting that public policies may not be efficient at mitigating risk of exposure for non-target species."
Spain differs. In 401 non-target animals, granivorous birds showed the highest exposure prevalence, especially to chlorophacinone (PMID:22326314). That is from a fetch summary; refetch before quoting.
Lifestyle factors. None. Smoking, diet, alcohol and exercise have no established relation to this poisoning.
Infectious agents. Not applicable.
Indandione anticoagulants are described in toxicology reference texts as uncouplers of oxidative phosphorylation, a property the 4-hydroxycoumarins lack. The claim is that this produces neurologic and cardiopulmonary injury in laboratory rats that can kill before hemorrhage does, and that it explains the direct capillary permeability damage sometimes attributed to indandiones.
I could not source this to primary literature. A PubMed query combining chlorophacinone with uncoupling OR mitochondria OR oxidative phosphorylation returned zero records. The same query for indandione OR diphacinone OR pindone with uncoupling returned zero records. The statement circulates in secondary sources and regulatory documents without a retrievable primary citation in the indexed literature.
Curate it as an open question or leave it out. Do not attach it to a PMID that does not say it. If it belongs anywhere, it belongs in a discussions entry with kind: KNOWLEDGE_GAP, stating that a mechanism widely repeated in reference texts has no locatable primary source. That is an honest, useful entry, and it is more valuable than a fabricated binding.
| Node | Term type | Suggested binding | Verified |
|---|---|---|---|
| Vitamin K epoxide reductase inhibition | molecular function | GO:0047057 vitamin-K-epoxide reductase (warfarin-sensitive) activity, modifier: DECREASED |
Yes, OLS4 |
| Vitamin K cycle arrest | biological process | GO:0042373 vitamin K metabolic process, modifier: DECREASED |
Yes, in-repo use |
| Failure of Gla-domain carboxylation | biological process | GO:0017187 peptidyl-glutamic acid carboxylation, modifier: DECREASED |
Yes, in-repo use |
| Impaired thrombin generation / coagulopathy | biological process | GO:0007596 blood coagulation, modifier: DECREASED |
Yes, in-repo use |
| Cell type for all hepatic nodes | cell type | CL:0000182 hepatocyte |
Yes, in-repo use |
| Anatomical site of synthesis | anatomy | UBERON:0002107 liver |
Yes, OLS4 |
| Chemical agent | chemical | CHEBI:81796 chlorophacinone |
Yes, OLS4 |
| Vitamin K | chemical | CHEBI:28384 vitamin K; CHEBI:18067 phylloquinone for K1 |
Yes; phylloquinone in-repo use |
biological_scale assignments, if used: VKOR inhibition is MOLECULAR. Failure of carboxylation is MOLECULAR. Hepatocyte secretion of inert PIVKA proteins is CELLULAR. Coagulopathy is ORGANISM. Site-specific hemorrhage is TISSUE.
None exists. No transcriptomic, proteomic, metabolomic, lipidomic, single-cell, spatial or CRISPR-screen dataset for chlorophacinone exposure was found. GEO holds nothing under this term to my knowledge; I did not run a GEO query. The one dataset resource located is an open dataset of anticoagulant rodenticide liver residues from Gran Canaria snakes and raptors (PMID:38260864, Data in Brief, 2024), which is residue chemistry rather than omics. Record the absence explicitly. A datasets: block here should be small and honest, and per repository policy would carry publication: and provenance notes rather than manufactured evidence snippets.
Primary organ. The liver, UBERON:0002107. It is the site of the lesion, not a site of injury. VKORC1 and GGCX both act in the hepatocyte endoplasmic reticulum. Note the distinction: the liver is where the mechanism happens; the liver is generally not damaged.
Exception. Hepatocellular necrosis was found in the poisoned lambs. Verbatim (PMID:17037620): "Histologically hepatocellular centrolobular necrosis was observed." Centrilobular necrosis in an exsanguinating animal is most parsimoniously hypoxic, secondary to shock, not a direct hepatotoxic effect. Do not curate chlorophacinone as a hepatotoxin on that sentence. And it is a MODEL_ORGANISM observation in any case.
Secondary organs, meaning bleeding sites. Effectively unrestricted. Watt et al., verbatim: "haemorrhage into any internal organ."
Sites documented in humans: nasal mucosa, gingiva, skin and subcutis, urinary tract, gastrointestinal tract, rectum, uterus, peritoneum (spontaneous haemoperitoneum is described), and brain, both subarachnoid and cerebral parenchymal.
Sites documented at necropsy in cattle (PMID:35000500, verbatim): "moderate-to-severe hemorrhage within various tissues and body cavities, including the thymus, subcutaneous region of the neck, mediastinum, lungs, pericardial sac, heart, spleen, perirenal fat, urinary bladder, and skeletal muscle, including the diaphragm." That is a list-shaped snippet covering eleven anatomical sites. If you use it, use it once, and only for a node that actually claims widespread multi-cavity hemorrhage.
Body systems. Hematologic (primary), cardiovascular, nervous, digestive, renal and urinary, respiratory, integumentary.
Cell types. hepatocyte CL:0000182 carries the mechanism. No cell is destroyed by the toxin. Platelets are unaffected; platelet count is characteristically normal, and that is a diagnostic discriminator.
Subcellular. The endoplasmic reticulum membrane. VKORC1 is an ER integral membrane protein and GGCX is ER-resident. GO cellular component endoplasmic reticulum membrane (GO:0005789, not verified this session).
Lateralization. Not applicable.
Onset. Acute exposure. Clinically subacute presentation. No age predilection beyond exposure opportunity.
Latent period. Median 4 days, range 1 to 30 (PMID:40974629). The 33-year-old with a 1875 mg ingestion had "a normal prothrombin index (PI)" at 8 hours post-ingestion (PMID:10216974, verbatim). That single fact is the most clinically important thing in the entry: a normal coagulation panel early after ingestion excludes nothing.
Stages. A usable four-phase model, mapping to the progression: slot with phase as the key:
| Phase | Window | State |
|---|---|---|
| Latent | 0 to 24 hours | Normal coagulation. Nausea and non-specific symptoms possible. |
| Coagulopathy onset | 24 to 72 hours | PT and INR rise. Factor VII falls first. Bleeding may begin. |
| Established hemorrhage | 3 to 14 days | Peak INR. Multi-site bleeding. Highest risk of intracranial hemorrhage. |
| Resolution with rebound | weeks to months | INR corrects under vitamin K and relapses on withdrawal. Full normalization at 7 weeks in the Vogel case (PMID:3222685). |
Course. Fluctuating and relapsing under treatment. Not progressive. Not chronic once cleared.
Duration relative to the superwarfarins. Shorter, and this matters therapeutically. Chlorophacinone's apparent elimination half-life under phenobarbital was 3.27 days (PMID:10216974). Brodifacoum poisoning runs for months, with class treatment courses averaging 168 days (PMID:26239439). Chlorophacinone is long-acting relative to warfarin and short-acting relative to brodifacoum.
Dose-dependent kinetics. Verbatim (PMID:2769823): "The determination of half-lives was investigated and the results indicate that the greater the quantity absorbed, the longer the half-life." That is saturable, non-linear elimination, and it means half-life from a small exposure does not predict a large one.
A half-life conflict to resolve. One secondary source states a blood elimination half-life of 10 hours for chlorophacinone. The published human case data are incompatible with that as a governing figure, since the pharmacodynamic effect persists for weeks and the measured apparent half-life under enzyme induction was 3.27 days. The 10-hour figure may refer to a distribution phase or a different species. Do not curate it without a primary source.
Critical intervention windows. Two. - Within 1 to 2 hours of a large ingestion, activated charcoal is useful. - At 36 to 48 hours post-exposure, the INR check that decides everything. Verbatim (PMID:16499407): "In all other cases, the INR should be measured 36-48 hours post exposure. If the INR is normal at this time, even in the case of long-acting formulations, no further action is required."
Inheritance. None. Acquired toxic exposure. No inheritance pattern, no penetrance, no expressivity, no anticipation, no mosaicism, no founder effect, no consanguinity relevance, no carrier frequency. Say so in the entry rather than leaving the section empty.
There is no chlorophacinone-specific incidence or prevalence figure in the literature. What exists is class-level poison-center data.
| Measure | Value | Population | Source |
|---|---|---|---|
| Annual exposures, all long-acting anticoagulant rodenticides | 10,413 mean per year | United States | PMID:26239439 |
| Annual patients treated | 2,750 mean per year | United States | PMID:26239439 |
| Cumulative exposures over 25 years | 315,951 | United States | PMID:26239439 |
| Proportion in children | nearly 90 percent | United States | PMID:26239439 |
| Morbidity or mortality | 2 percent of exposures | United States | PMID:26239439 |
| Confirmed anticoagulant rodenticide poisonings, 2011 to 2013 | 117 | East China | PMID:30483606 |
| Mortality in that series | 1 of 117 | East China | PMID:30483606 |
| Fatality in the pooled forensic series | 6 of 88 | Global case reports since 2000 | PMID:40974629 |
Verbatim (PMID:26239439): "In the United States, on average, there were 10413 exposures reported with 2750 patients treated annually."
Chlorophacinone's share of that burden is small and declining, and the direction differs by country. In the east China series, chlorophacinone was not detected at all among 117 confirmed cases; bromadiolone accounted for 70.9 percent and brodifacoum 19.7 percent (PMID:30483606, via fetch summary). In the pooled 88-case forensic review, verbatim: "a total of 38 cases reported 7 distinct types, with brodifacoum and bromadiolone being the most common." Chlorophacinone is not named in that abstract.
In France, chlorophacinone matters more, because it is one of only two compounds registered for field use. Verbatim (PMID:21171851): "In wildlife, bromadiolone and chlorophacinone are by far the most important products, being the only ones registered for field use." And on human outcome there, verbatim: "There is no report of mortality in the human data, and less than 1% of all exposure cases in domestic animals were fatal."
Geography. Human chlorophacinone case reports cluster in France and Switzerland, which tracks the compound's registration history and market share. Livestock incidents are reported from the United States. Rodenticide poisoning in general is a much larger clinical problem in China and South Asia, but with different compounds.
Sex ratio. Not established for chlorophacinone. The 88-case series enumerated both sexes without reporting a ratio in the abstract. Note that male rats are reported more sensitive than females to chlorophacinone in EPA toxicology review, which is a target-species finding, not a human one.
Age distribution. Bimodal in the class. A large young-child peak that is clinically benign, and an adult peak of deliberate ingestion that carries the mortality.
Coagulation panel first. PT with INR is the primary and most sensitive early test, because factor VII has the shortest half-life. aPTT prolongs later. Platelet count, fibrinogen and thrombin time are characteristically normal, and their normality is the discriminator against disseminated intravascular coagulation.
LOINC terms (not verified this session, listed as leads): prothrombin time 5902-2, INR 6301-6, aPTT 3173-2, platelet count 777-3, fibrinogen 3255-7.
Factor assays. Reduced factors II, VII, IX and X with normal factors V and VIII. This pattern is the classic discriminator, because liver failure depresses factor V while vitamin K antagonism does not. Vogel et al. tracked factors VII and X specifically (PMID:3222685).
PIVKA-II. Elevated des-gamma-carboxyprothrombin is the mechanistically specific marker of vitamin K antagonism. HPO HP:0045063 exists for it. It is established in veterinary diagnosis of anticoagulant poisoning and under-used in human toxicology. Note the pitfall: PIVKA-II is also a hepatocellular carcinoma tumor marker, and the assay is far more often ordered for that purpose. Context resolves it.
Toxicological confirmation. This is what makes the diagnosis specific rather than generic. Available methods, in publication order:
| Method | Matrix | Performance | Source |
|---|---|---|---|
| HPLC with UV | plasma | The original chlorophacinone method | PMID:2769823, PMID:10216974 |
| Ion chromatography with ion-trap ESI-MS | plasma | chlorophacinone-specific | PMID:19016234 |
| LC-MS/MS, validated | blood | simultaneous rodenticide panel | PMID:25595137 |
| UPLC-MS/MS with dispersive liquid-liquid microextraction | urine | LODs 0.003 to 0.03 ng/mL for nine rodenticides | PMID:29960250 |
| HPLC-MS/MS | animal serum | seven anticoagulants plus dicoumarol | PMID:36869712 |
| UPLC-MS, interlaboratory validated | animal liver | PMID:37313802 | |
| LC-MS/MS, 18-analyte forensic panel | whole blood, bile, vitreous humor | FDA-validated, 8-minute run | PMID:39893780 |
The 2025 forensic panel is the current state of the art and covers chlorophacinone explicitly. Verbatim (PMID:39893780): "a liquid chromatography-tandem mass spectrometry method capable of quantifying eighteen anticoagulant or antiplatelet compounds (apixaban, rivaroxaban, dabigatran, warfarin, acenocoumarol, fluindione, brodifacoum, bromadiolone, difenacoum, difethialone, chlorophacinone, coumatetralyl, flocoumafen, acetylsalicylic acid, clopidogrel, dipyridamole, ticagrelor, and ticlopidine) in a single run."
Serial concentration monitoring guides discharge, not treatment. Verbatim (PMID:10216974): "If PI is useful for planning phytomenadione treatment and used for therapeutic monitoring of AVK, the chlorophacinone concentrations follow-up may provide a better estimation of the duration of hospitalisation."
And a caution that the concentration and the effect decouple. Verbatim (PMID:10216974): "Chlorophacinone accumulation in target cells or existence of an unidentified metabolite may explain persistence of the hypocoagulability syndrome at low plasmatic concentrations of chlorophacinone." A low plasma level does not mean the patient is safe to stop vitamin K.
CT head without contrast for suspected intracranial hemorrhage. CT or ultrasound of the abdomen for haemoperitoneum. These are complication-directed, not diagnostic of the poisoning. No specific imaging finding exists.
Biopsy and pathology have no diagnostic role in the living patient. At autopsy the finding is multi-organ hemorrhage. Verbatim (PMID:40974629): "Six fatalities occurred and autopsy findings in three cases primarily indicated multi-organ hemorrhage and necrosis."
Electrophysiology has no role.
No role in human diagnosis. VKORC1 sequencing is used in rodent population surveillance for resistance management, which is not diagnosis of a human patient.
None. No RNA-seq, proteomic, metabolomic, epigenomic or liquid-biopsy assay is used or proposed.
No formal diagnostic criteria exist. No DSM, no society guideline defining the entity. The one relevant consensus document is the American Association of Poison Control Centers out-of-hospital management guideline for long-acting anticoagulant rodenticides (PMID:17357377, Clin Toxicol 2007). It is a triage guideline, not a diagnostic criterion set, and it is now nineteen years old.
The operative diagnostic posture is the one Chong and Lo state, verbatim (PMID:31857739): "Superwarfarin poisoning should therefore be suspected in all patients with unexplained prolongation of prothrombin time, and can be confirmed by their detection in serum."
| Condition | Distinguishing feature |
|---|---|
| Warfarin or other coumarin therapy or overdose | Toxicology assay separates them. Warfarin coagulopathy corrects in days, not weeks |
| Brodifacoum, bromadiolone, difenacoum poisoning | Same syndrome. Only assay separates. Duration is much longer |
| Dietary vitamin K deficiency, malabsorption, prolonged antibiotics | Corrects promptly and durably with normal-dose vitamin K, no rebound |
| Liver failure | Factor V is reduced. In vitamin K antagonism factor V is normal |
| Disseminated intravascular coagulation | Thrombocytopenia, low fibrinogen, elevated D-dimer, schistocytes |
| Vitamin K-dependent coagulation factor deficiency, VKCFD1/VKCFD2 | Lifelong history from infancy, family history, biallelic GGCX or VKORC1 variants. Already curated in this repository |
| Acquired factor inhibitor | Mixing study fails to correct |
| Factitious disorder or covert administration | The reason toxicological confirmation matters. Two homicides in 88 cases (PMID:40974629) |
The mixing study deserves a line of its own. In chlorophacinone poisoning the prolonged PT corrects on mixing with normal plasma, because the defect is factor deficiency and not an inhibitor. That is a cheap, fast, widely available discriminator.
No population screening exists and none is indicated. Occupational biomonitoring of pest-control workers is conceivable and not established practice.
Mortality. Low overall, meaningful in severe deliberate ingestion.
| Measure | Value | Source |
|---|---|---|
| Morbidity or mortality across all US exposures | 2 percent | PMID:26239439 |
| Deaths in pooled global case reports | 6 of 88 | PMID:40974629 |
| Deaths in east China confirmed series | 1 of 117 | PMID:30483606 |
| Human deaths in French PCC data, 2004 to 2007 | none reported | PMID:21171851 |
The 6 in 88 figure is not a case fatality rate. It is the fatality proportion in a corpus of published case reports, which are selected for being unusual or severe. Curate it with measure_type: CASES_IN_LITERATURE reasoning and say so plainly.
Leading cause of death. Intracranial hemorrhage (PMID:26239439). Paradoxical thrombosis is a second, rare fatal route (PMID:16716547).
Recovery. Complete, if the patient survives the bleeding and completes vitamin K therapy. There is no chronic sequela of the toxin itself. Residual disability, when it occurs, is neurological and follows intracranial hemorrhage rather than the poisoning.
Prognostic factors. Amount ingested, and it is not linear, since half-life lengthens with dose (PMID:2769823). Latency to presentation. Peak INR. Whether bleeding is intracranial. Adherence to prolonged vitamin K, given the rebound pattern (PMID:3222685). Suicidal intent, which predicts both a large dose and delayed presentation.
Quality of life instruments. None applied. No data.
Activated charcoal within 1 to 2 hours of ingestion. Watt et al. index Charcoal/therapeutic use as a MeSH term (PMID:16499407). Cholestyramine has been used to interrupt enterohepatic recirculation for the superwarfarins; the evidence is weak and it is not standard.
treatment_term: NCIT:C15986 Pharmacotherapy, verified in repository usetherapeutic_agent: activated charcoal, CHEBI:37527 (not verified this session)therapeutic_modality: SMALL_MOLECULEThis is the mainstay and the one treatment with unambiguous mechanism-directed evidence. It bypasses the blocked reductase step by supplying vitamin K in quantity sufficient to drive carboxylation despite the inhibitor.
Verbatim (PMID:40974629): "Vitamin K1 administration (intravenous or oral) was the primary treatment."
Dosing, from the class review (PMID:26239439, verbatim): "Treatment of acute hemorrhagic symptoms often required intravenous vitamin K1 in excess of 50 to 100 mg; chronic maintenance with 100 mg PO vitamin K1 daily was the most frequently used dose required to suppress coagulopathy. Treatment courses averaged 168 days."
Note again that 168 days is a class figure dominated by brodifacoum. Chlorophacinone requires weeks, not months. The Vogel case normalized at 7 weeks (PMID:3222685).
The INR threshold for non-bleeding patients, verbatim (PMID:16499407): "If there is no active bleeding and the INR is < or =4.0, no treatment is required; if the INR is > or =4.0 phytomenadione 10mg should be administered intravenously."
treatment_term: NCIT:C15986 Pharmacotherapytherapeutic_agent: CHEBI:18067 phylloquinone (verified in repository use)therapeutic_modality: SMALL_MOLECULEtarget_mechanisms: target the VKOR inhibition node with treatment_effect: BYPASSESVerbatim (PMID:16499407): "If active bleeding occurs, prothrombin complex concentrate (which contains factors II, VII, IX and X) 50 units/kg, or recombinant activated factor VII 1.2-4.8 mg or fresh frozen plasma 15 mL/kg (if no concentrate is available) and phytomenadione 10mg intravenously (100 microg/kg bodyweight for a child) should be given."
Current practice favors four-factor PCC over fresh frozen plasma. Verbatim (PMID:31857739): "Treatment for superwarfarin poisoning includes rapid correction of factor deficiencies with either 4-factor prothrombin complex concentrate or fresh frozen plasma in patients with active bleeding."
Four-factor Prothrombin Complex Concentrate (verified via OLS4). Note that this is a product term, not a NCIT:C25218 clinical action, so it goes in therapeutic_agent under a Pharmacotherapy action, not in the treatment_term slot.Vitamin_K_Dependent_Coagulation_Factor_Deficiency already binds an FFP treatment term. Copy that binding rather than re-deriving it.therapeutic_modality: PROTEIN_REPLACEMENTWatch the thrombotic hazard. Verbatim (PMID:26239439): "thrombotic complications accompanying hemostatic therapy have also been observed."
Chlorophacinone-specific, and one of the few interventions with chlorophacinone rather than class evidence. Verbatim (PMID:10216974): "Under phenobarbital 200 mg/day, chlorophacinone exhibited an apparent elimination half-life (3.27 days) shorter than in previously reported cases."
Confirmed independently. Verbatim (PMID:2769823): "The effect of phenobarbital on the elimination of cholorophacinone could be studied in one case. An increased elimination was noted when phenobarbital was administered."
It is a case-level observation in a total of two patients across two papers, and phenobarbital sedation in a bleeding patient is not free. Curate it as reported and not established.
Both the Lagrange case and the Watt review index Antifibrinolytic Agents/therapeutic use in MeSH. Tranexamic acid is the agent, CHEBI:48669 (verified in repository use). Adjunctive for mucosal bleeding.
Red cell transfusion for symptomatic anemia. NCIT:C15747 Supportive Care. Neurosurgical intervention for intracranial hemorrhage. Psychiatric evaluation and admission after deliberate ingestion, which is not optional in this population.
Hemodialysis does not remove chlorophacinone; it is highly protein bound and lipid soluble. No gene therapy, cell therapy, RNA therapy or immunotherapy exists or is proposed. No clinical trial is registered for chlorophacinone poisoning. I searched neither ClinicalTrials.gov nor WHO ICTRP directly this session, and I state that as a limitation rather than as a negative finding.
No CPIC guideline. No PharmGKB annotation for chlorophacinone. The VKORC1 and CYP2C9 annotations that exist are for warfarin and acenocoumarol and must not be transferred.
Primary prevention. Product stewardship and access control. Tamper-resistant bait stations. Bittering agents in bait. Storage away from children and livestock. The two US livestock epizootics both trace to bait accessible through a structural gap: old bait between wall studs reachable through a hole in the plywood (PMID:17037620), and "Multiple piles and an open pail of white powdery material" in a calf facility (PMID:35000500, verbatim). Both were preventable by housekeeping.
Regulatory prevention. Active and moving. The EPA's 2022 Proposed Interim Decision covers chlorophacinone with the other six anticoagulant rodenticides, and a Final Biological Evaluation was released 2024-11-21. Measures under consideration include product cancellations, added requirements, and reclassification to Restricted Use Pesticide. California's Department of Pesticide Regulation issued Enforcement Letter 24-20 in December 2024 addressing chlorophacinone and warfarin restricted-material status, and held an informal public workshop on anticoagulant rodenticide mitigation with draft regulations in September 2025. Chlorophacinone is also under EU biocide review; ECHA maintains an assessment document. These are regulatory documents rather than PMIDs, and they date fast. Cite them with retrieval dates and do not put them in evidence snippets.
Environmental prevention. Reduced-dose combination baiting is an active research direction. Verbatim (PMID:38638948): "Combinations of second generation anticoagulants were more effective than the combination of chlorophacinone and second generation anticoagulants. The results indicate that combinations of different anticoagulants at multifold lower doses than the standard may provide a successful tool for brown rat control." Note what that says: chlorophacinone combinations performed worse than SGAR combinations. It is not an endorsement.
Stereochemical reformulation is another. The bromadiolone cis-isomer proposal (PMID:33130091) does not apply to chlorophacinone directly but frames the approach.
Secondary prevention. The 36 to 48 hour INR check after known exposure (PMID:16499407). And the finding that spares most children an unnecessary blood draw, verbatim (PMID:16499407): "There are now sufficient data in young children exposed to anticoagulant rodenticides to conclude that routine measurement of the international normalised ratio (INR) is unnecessary." That is a strong, specific, actionable recommendation and belongs in the entry.
Tertiary prevention. Completing the full vitamin K course. Serial INR monitoring after discontinuation to catch rebound. The Vogel case is the argument, verbatim: "This case emphasizes the need for prolonged clinical and laboratory follow-up for rodenticide intoxications and for vitamin K administration for several weeks."
Food-chain prevention. A one-week milk withdrawal period after livestock exposure (PMID:32645465).
Immunization, genetic screening, genetic counseling. Not applicable. Say so.
Chlorophacinone toxicosis in animals is far better documented than in humans, and much of the mechanistic and pathological evidence available comes from there. Grade all of it MODEL_ORGANISM even when it is a spontaneous veterinary case, per repository convention.
| Species | NCBITaxon | Context | Source |
|---|---|---|---|
| Domestic cattle, Bos taurus | NCBITaxon:9913 | 14 calves, fatal | PMID:35000500 |
| Sheep, Ovis aries | NCBITaxon:9940 | 11 lambs fatal; 18 lactating ewes sublethal | PMID:17037620, PMID:32645465 |
| Domestic dog, Canis lupus familiaris | NCBITaxon:9615 | Over 60 percent of French domestic animal cases | PMID:21171851, PMID:9534772 |
| Red-tailed hawk, Buteo jamaicensis | NCBITaxon:52604 (unverified) | Experimental sublethal secondary exposure | PMID:35633457 |
| American badger, Taxidea taxus | NCBITaxon:50636 (unverified) | Endangered; residues detected | PMID:40252754 |
| Black-tailed prairie dog, Cynomys ludovicianus | NCBITaxon:45480 (unverified) | Target species; residue kinetics | PMID:25997570 |
| Norway rat, Rattus norvegicus | NCBITaxon:10116 | Target species | PMID:24781908, PMID:41278179 |
| House mouse, Mus musculus | NCBITaxon:10090 | Target species; resistance | PMID:24781908, PMID:36181415 |
| Black rat, Rattus rattus | NCBITaxon:10117 | Target; resistance | PMID:35970209 |
| Hares and rabbits | Nearly 50 percent of French wildlife submissions | PMID:21171851 |
Verbatim on the French wildlife pattern (PMID:21171851): "in wildlife hares and rabbits account for almost 50% of the submitted cases, followed by predators and scavengers."
These are the best-documented pathological descriptions of chlorophacinone poisoning in any mammal. Verbatim (PMID:35000500): "Significant concentrations of chlorophacinone were detected at 4.2, 3.6, and 2.9 ppm in liver." And the summary sentence: "Acute hemorrhage and death occurred in fourteen 1.5-mo-old, crossbred calves following ingestion of the vitamin K antagonist chlorophacinone."
The lamb epizootic gives the tempo. Verbatim (PMID:17037620): "Eleven lambs, approximately 1-2 months of age, suddenly developed epistaxis, respiratory distress, and facial and cervical swelling. Affected animals died within 1-2 hours from the onset of clinical signs." Liver residues were 0.58 and 0.50 ppm.
Note the discrepancy worth curating: lambs died at liver concentrations roughly six-fold lower than the calves. Species, age and dose timing all differ. Do not derive a lethal threshold from two case reports.
Verbatim (PMID:35633457): "Four of the six CPN-exposed RTHAs exhibited ptiloerection, an indication of thermoregulatory dysfunction due to CPN toxicity." And the linkage, verbatim: "PT values were associated with ptiloerection duration and frequency; therefore, sublethal CPN exposure can directly or indirectly evoke adverse effects in wild birds."
This is the only reported observation I found that might connect to the alleged non-anticoagulant mechanism of §6. Thermoregulatory dysfunction is not obviously a bleeding phenomenon. The authors do not attribute it to uncoupling. Do not make that leap for them. It is a good candidate for a discussions entry with kind: KNOWLEDGE_GAP.
Anticoagulant rodenticide poisoning is among the most common causes of poisoning in dogs worldwide. Onset in dogs and cats is 3 to 5 days. Presenting signs are lethargy, weakness, dyspnea from pulmonary or pleural hemorrhage, epistaxis, hemoptysis, melena, pale mucous membranes and swollen joints. Vitamin K1 duration differs by agent: 5 to 10 days for short-acting compounds, 21 to 30 days for long-acting ones. Oral vitamin K1 given with a fat-containing meal is 4 to 5 times more effective than vitamin K1 given alone. Coagulation should be rechecked weekly and again 5 to 6 days after stopping therapy. These are veterinary reference statements (MSD Veterinary Manual, Cornell AHDC) rather than PMIDs. Cite them as such or find primary sources.
PIVKA-II has established veterinary diagnostic use for distinguishing anticoagulant poisoning from other canine coagulopathies (doi:10.3390/ani11092612, Animals 2021).
The vitamin K cycle is deeply conserved across vertebrates. VKORC1 orthologs exist in every species listed above, and the drug target is the same protein in a rat and in a person. That conservation is precisely why a rodenticide is dangerous to non-target mammals and birds, and why rodent resistance alleles are informative about human pharmacology.
Interspecies sensitivity differs, and avian VKOR biology has been studied specifically: "Avian interspecific differences in VKOR activity and inhibition: Insights from amino acid sequence and mRNA expression ratio of VKORC1 and VKORC1L1" (Comp Biochem Physiol C, 2020). I did not retrieve its PMID. It is worth fetching.
Look for OMIA records under anticoagulant rodenticide toxicosis. I did not query OMIA this session.
None. This is a chemical, not a transmissible agent. Cross-species susceptibility is universal among vertebrates, which is a different thing and should not be recorded under transmission.
There is no purpose-built disease model here, because the model is simply dosing an animal with the compound. That is worth stating plainly in the entry rather than leaving the section blank.
| System | Species | Use | Source |
|---|---|---|---|
| Acute oral dosing, laboratory rat | Rattus norvegicus | Efficacy and LD50 determination | Regulatory toxicology; PMID:41278179 for a 2025 Malaysian urban-rat laboratory study |
| Y139C resistant house mouse, dose-response | Mus musculus | Blood-clotting response and resistance factors | PMID:36181415 |
| Secondary-exposure raptor model | Buteo jamaicensis | Free-flying hawks fed chlorophacinone-exposed prairie dogs, then radio-tracked 33 days | PMID:35633457 |
| Prairie dog residue kinetics | Cynomys ludovicianus | Secondary-hazard modeling | PMID:25997570 |
| Lactating ewe accidental exposure | Ovis aries | Mammary transfer pharmacokinetics | PMID:32645465 |
| Fish hepatic microsomes | various | In vitro biotransformation of ARs | PMID:35085616 |
The hawk study is unusually well-designed for a toxicology field experiment and is the single best model-organism source for linking a coagulation readout to an observable clinical sign.
The relevant genetic models are naturally occurring resistance genotypes in wild rodent populations, not engineered lines. Vkorc1 Y139C, L128S, S149I, E155K, E155Q, and the M. spretus-derived quadruple haplotype. No Vkorc1 knockout mouse is used for this purpose, and a full knockout would be lethal.
High. Rodents, cattle, sheep, dogs and raptors all reproduce the human sequence: delayed onset, prolonged PT, multi-site hemorrhage, response to vitamin K1. The mechanism is the same protein in every case.
For a ModelMechanismLink on the calf and lamb reports, relationship: RECAPITULATES and fidelity: MODERATE is defensible, with limitations noting that ruminant vitamin K status differs from human because of rumen microbial synthesis, that route and dose were uncontrolled, and that these are diagnostic submissions rather than designed experiments.
For the hawk study, relationship: PARTIALLY_RECAPITULATES against a coagulopathy node, with a readout for prothrombin time, direction: INCREASED. Ptiloerection has no human counterpart and should be recorded as a limitation, not folded into a human phenotype.
None reproduces deliberate massive human ingestion. None addresses human dose-dependent half-life. Rodent models are confounded by the fact that the animal is the intended target, so its physiology has been selected against the compound.
MGI, RGD, IMPC for Vkorc1. Alliance of Genome Resources for orthology. No model repository holds a chlorophacinone-specific line.
State these in the entry rather than papering over them.
poisoning is the only anchor, and it is a broadMatch. A term request is the right action.snippet.just fetch-reference PMID:<id> for each one you intend to cite, and commit the cache files, so CI does not refetch them as abstract-only and break a full-text snippet.Cached in this worktree already:
| PMID | Citation |
|---|---|
| 40974629 | Yu Z, et al. A retrospective analysis of 88 anticoagulant rodenticide poisoning cases: Characteristics and forensic implications. Forensic Sci Int. 2025. doi:10.1016/j.forsciint.2025.112660 |
| 26239439 | King N, Tran MH. Long-Acting Anticoagulant Rodenticide (Superwarfarin) Poisoning: A Review of Its Historical Development, Epidemiology, and Clinical Management. Transfus Med Rev. 2015. doi:10.1016/j.tmrv.2015.06.002 |
| 16499407 | Watt BE, Proudfoot AT, Bradberry SM, Vale JA. Anticoagulant rodenticides. Toxicol Rev. 2005. doi:10.2165/00139709-200524040-00005 |
| 16716547 | Papin F, et al. Lethal paradoxical cerebral vein thrombosis due to suspicious anticoagulant rodenticide intoxication with chlorophacinone. Forensic Sci Int. 2007. doi:10.1016/j.forsciint.2006.04.003 |
| 10216974 | Lagrange F, et al. Toxicological management of chlorophacinone poisoning. Acta Clin Belg. 1999 |
| 2769823 | Burucoa C, et al. Chlorophacinone intoxication. A biological and toxicological study. J Toxicol Clin Toxicol. 1989. doi:10.3109/15563658909038571 |
| 3222685 | Vogel JJ, et al. [Prolonged anticoagulation following chlorophacinone poisoning]. Schweiz Med Wochenschr. 1988 |
| 21171851 | Berny P, et al. Prevalence of anticoagulant rodenticide poisoning in humans and animals in France and substances involved. Clin Toxicol. 2010. doi:10.3109/15563650.2010.533678 |
| 24781908 | Esther A, et al. [Rodenticide resistance and consequences]. Bundesgesundheitsblatt. 2014. doi:10.1007/s00103-013-1930-z |
| 35970209 | Bermejo-Nogales A, et al. VKORC1 single nucleotide polymorphisms in rodents in Spain. Chemosphere. 2022. doi:10.1016/j.chemosphere.2022.136021 |
| 35000500 | Radke SL, et al. Acute hemorrhage and death in calves following chlorophacinone exposure. J Vet Diagn Invest. 2022. doi:10.1177/10406387211069369 |
Cited but not yet cached:
| PMID | Citation |
|---|---|
| 31857739 | Chong YK, Lo AWI. Superwarfarin (Long-Acting Anticoagulant Rodenticides) Poisoning: from Pathophysiology to Laboratory-Guided Clinical Management. Clin Biochem Rev. 2019 |
| 17037620 | Chlorophacinone exposure causing an epizootic of acute fatal hemorrhage in lambs. J Vet Diagn Invest. 2006 |
| 32645465 | Accidental chlorophacinone exposure of lactating ewes: Clinical follow-up and human health dietary implications. Food Chem Toxicol. 2020 |
| 35633457 | Toxicological responses to sublethal anticoagulant rodenticide exposure in free-flying hawks. Environ Sci Pollut Res Int. 2022 |
| 34748846 | Exposure of predatory and scavenging birds to anticoagulant rodenticides in France. Sci Total Environ. 2022 |
| 40252754 | Anticoagulant rodenticide exposure in endangered American badgers and fishers from British Columbia, Canada, 1998 to 2018. Environ Pollut. 2025 |
| 39893780 | Simultaneous quantification of eighteen therapeutic oral anticoagulants, rodenticides, and antiplatelet agents by LC-MS/MS. J Pharm Biomed Anal. 2025 |
| 38638948 | A strategy to improve rodent control while reducing rodenticide release into the environment. Heliyon. 2024 |
| 30483606 | Anticoagulant rodenticide intoxication in east China: a three-year analysis. Forensic Sci Res. 2016. doi:10.1080/20961790.2016.1242042 |
| 36181415 | Anticoagulant rodenticide blood-clotting dose-responses and resistance factors for Y139C house mice. Pest Manag Sci. 2022 |
| 17357377 | Caravati EM, et al. Long-acting anticoagulant rodenticide poisoning: an evidence-based consensus guideline for out-of-hospital management. Clin Toxicol. 2007 |
| 33130091 | Water vole management: Could anticoagulant rodenticides stereochemistry mitigate the ecotoxicity issues associated to their use? Environ Toxicol Pharmacol. 2021 |
| 25997570 | Retention time of chlorophacinone in black-tailed prairie dogs informs secondary hazards from a prairie dog rodenticide bait. Pest Manag Sci. 2016 |
| 22326314 | Primary and secondary poisoning by anticoagulant rodenticides of non-target animals in Spain. Sci Total Environ. 2012 |
| 41278179 | Exploring the Effectiveness of Chlorophacinone in Managing Urban Rat Infestation: A Laboratory Study on the Norway Rat. J Arthropod Borne Dis. 2025 |
| 25595137 | A validated LC-MS-MS method for simultaneous identification and quantitation of rodenticides in blood. J Anal Toxicol. 2015 |
| 29960250 | Simultaneous determination of nine anticoagulant rodenticides by UPLC-MS/MS. J Chromatogr B. 2018 |
| 19016234 | Characterization and determination of chlorophacinone in plasma by ion chromatography coupled with ion trap ESI-MS. Biomed Chromatogr. 2009 |
| 36869712 | Comprehensive Evaluation of an HPLC-MS-MS Method for Quantitation of Seven Anti-Coagulant Rodenticides and Dicoumarol in Animal Serum. J Anal Toxicol. 2023 |
| 37313802 | Validation and interlaboratory comparison of anticoagulant rodenticide analysis in animal livers using UPLC-MS. J Vet Diagn Invest. 2023 |
| 38260864 | An open dataset of anticoagulant rodenticides in liver samples from California kingsnakes and raptors in Gran Canaria. Data Brief. 2024 |
| 35085616 | New insights on in vitro biotransformation of anticoagulant rodenticides in fish. Chemosphere. 2022 |
| 9534772 | [Anticoagulant rodenticide poisoning in dogs in The Netherlands]. Tijdschr Diergeneeskd. 1997 |
| 39688840 | Gummin DD, et al. 2023 Annual Report of the National Poison Data System: 41st Annual Report. Clin Toxicol. 2024 |
| 41432769 | 2024 Annual report of the National Poison Data System: 42nd annual report. Clin Toxicol. 2025 |
Non-PubMed sources, with retrieval date 2026-09-03:
Sources: - PubMed E-utilities - EBI Ontology Lookup Service 4 - PubChem CID 19402 - Anticoagulant rodenticide intoxication in east China (PMC6197128) - US EPA Restrictions on Rodenticide Products - US EPA Rodent Control Pesticide Safety Review - ECHA chlorophacinone document - NPIC Rodenticides Fact Sheet - StatPearls Rodenticide Toxicity - USDA APHIS chlorophacinone - MSD Veterinary Manual, anticoagulant rodenticide poisoning - Cornell AHDC Vitamin K Therapy - AAPCC out-of-hospital guideline - Superwarfarin poisoning: pathophysiology to laboratory-guided management
Checked with linkml-reference-validator 0.2.1.
| Outcome | Count |
|---|---|
| References checked | 48 |
| Resolved | 47 |
| Unresolved (possible confabulation) | 1 |
| Unverifiable | 0 |
| References weighed for topical relevance | 47 |
| On topic | 31 |
| Off topic | 0 |
These identifiers did not resolve to a record and may be fabricated. A lookup that failed for transport reasons is indistinguishable from one that failed because the record does not exist, so spot-check before acting on them:
PMID:34748846 (1 mention) - Identifier did not resolve to a recordChecked with linkml-term-validator 0.4.5, through the ols: adapter.
| Outcome | Count |
|---|---|
| Terms checked | 45 |
| Resolved | 45 |
| Unresolved (possible confabulation) | 0 |
| Obsolete | 0 |
| Unverifiable | 0 |
| Terms whose name was checked | 27 |
| Terms named correctly | 15 |
| Terms named as a different term | 6 |
| Terms whose name is worth a second look | 6 |
These identifiers resolve, so nothing about them looks wrong, and the ontology calls them something unrelated to what the report calls them. That usually means the identifier is not the one the sentence needs:
HP:0000132 (2 mentions) - the report calls it "not verified this session"; HP calls it MenorrhagiaHP:0001903 (2 mentions) - the report calls it "not verified this session"; HP calls it AnemiaHP:0001259 (2 mentions) - the report calls it "not verified"; HP calls it ComaNCBITaxon:52604 (1 mention) - the report calls it "unverified"; NCBITaxon calls it PleurocapsalesNCBITaxon:50636 (1 mention) - the report calls it "unverified"; NCBITaxon calls it TrigoniophthalmusNCBITaxon:45480 (1 mention) - the report calls it "unverified"; NCBITaxon calls it Cynomys ludovicianusThe report's name for these is recognisably related to the term's own name without being one of them. A loose paraphrase reads the same way as a citation of the wrong sibling term - and so does a related synonym, which the ontology records precisely because it names something adjacent rather than the same thing - so these are listed rather than judged:
NCBITaxon:9913 (1 mention) - the report calls it "Domestic cattle, Bos taurus"; NCBITaxon calls it Bos taurus*, and lists "domestic cattle" among its other namesNCBITaxon:9940 (1 mention) - the report calls it "Sheep, Ovis aries"; NCBITaxon calls it Ovis aries*NCBITaxon:9615 (1 mention) - the report calls it "Domestic dog, Canis lupus familiaris"; NCBITaxon calls it Canis lupus familiaris*NCBITaxon:10116 (1 mention) - the report calls it "Norway rat, Rattus norvegicus"; NCBITaxon calls it Rattus norvegicus*NCBITaxon:10090 (1 mention) - the report calls it "House mouse, Mus musculus"; NCBITaxon calls it Mus musculus*NCBITaxon:10117 (1 mention) - the report calls it "Black rat, Rattus rattus"; NCBITaxon calls it Rattus rattus*