Atelosteogenesis Type II phenotype curation notes
Date: 2026-04-19
Curator: Codex
Scope: phenotype section only for kb/disorders/Atelosteogenesis_Type_II.yaml
Sources used
- PMID:20301493, SLC26A2-Related Atelosteogenesis.
- PMID:1279661, Atelosteogenesis type II: sonographic and radiological correlation.
- PMID:3799721, de la Chapelle dysplasia.
- PMID:7632220, De la Chapelle dysplasia (atelosteogenesis type II): case report and review of the literature [corrected].
Phenotypes added or tightened
- Added
Micromeliafrom PMID:1279661. - Added
Midface retrusion,Epicanthus,Ulnar deviation of the hand or of fingers of the hand, andSandal gapfrom PMID:20301493. - Added
Coronal cleft vertebraeandCervical kyphosisfrom PMID:1279661. - Added
Bowing of the long bonesandLaryngeal stenosisfrom PMID:3799721. - Softened unsupported wording such as
hallmark,commonly, andfrequentin free-text descriptions where the cited abstracts did not make a frequency claim.
Claims considered but not added
Protuberant abdomenis present in the GeneReviews text, but I did not add it because I did not confirm a clean, repo-validated HPO mapping during this pass.Metaphyseal and epiphyseal abnormalities,horizontal sacrum, andadditional ossification centres in the pelvisare clearly described in PMID:1279661, but I did not add them without a more confident term choice.Ulna/fibula hypoplasiais described in PMID:3799721, but the abstract wording supports severe reduction rather than a clean absent-versus-hypoplastic distinction, so I left it out rather than overstate the ontology mapping.
Frequency and onset
- No new
frequencyvalues were added. - No
onsetvalues were added. - Although prenatal detection is reported in PMID:1279661, I left onset unset because the abstracts here more clearly support prenatal detectability than a disease-wide onset annotation policy for individual phenotypes.