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Pathophysiology Nodes

13
13 shared nodes are defined in this module.
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Cell Types

4
Skeletal muscle fiber CL:0008002 Cell Ontology (CL) Relation: this mechanism module involves this cell type This mechanism module involves Skeletal muscle fiber (CL:0008002). CL:0008002 is a cell type from the Cell Ontology. Macrophage CL:0000235 Cell Ontology (CL) Relation: this mechanism module involves this cell type This mechanism module involves Macrophage (CL:0000235). CL:0000235 is a cell type from the Cell Ontology. Skeletal muscle satellite cell CL:0000594 Cell Ontology (CL) Relation: this mechanism module involves this cell type This mechanism module involves Skeletal muscle satellite cell (CL:0000594). CL:0000594 is a cell type from the Cell Ontology. Fibro-adipogenic progenitor (PDGFRalpha+ mesenchymal cell) CL:0008019 Cell Ontology (CL) Relation: this mechanism module involves this cell type This mechanism module involves Fibro-adipogenic progenitor (PDGFRalpha+ mesenchymal cell) (CL:0008019). CL:0008019 is a cell type from the Cell Ontology.
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Biological Processes

10
Plasma membrane repair GO:0001778 ↓ DECREASED Gene Ontology (GO) Relation: this mechanism module involves this biological process This mechanism module involves decreased Plasma membrane repair (GO:0001778). GO:0001778 is a biological process from the Gene Ontology. Calcium ion import across the sarcolemma GO:0098703 ↑ INCREASED Gene Ontology (GO) Relation: this mechanism module involves this biological process This mechanism module involves increased Calcium ion import across the sarcolemma (GO:0098703). GO:0098703 is a biological process from the Gene Ontology. Store-operated calcium entry GO:0002115 ↑ INCREASED Gene Ontology (GO) Relation: this mechanism module involves this biological process This mechanism module involves increased Store-operated calcium entry (GO:0002115). GO:0002115 is a biological process from the Gene Ontology. Mitochondrial calcium ion transmembrane transport GO:0006851 ↑ INCREASED Gene Ontology (GO) Relation: this mechanism module involves this biological process This mechanism module involves increased Mitochondrial calcium ion transmembrane transport (GO:0006851). GO:0006851 is a biological process from the Gene Ontology. positive regulation of mitochondrial membrane permeability GO:0035794 ↑ INCREASED Gene Ontology (GO) Relation: this mechanism module involves this biological process This mechanism module involves increased positive regulation of mitochondrial membrane permeability (GO:0035794). GO:0035794 is a biological process from the Gene Ontology. Programmed necrotic cell death GO:0097300 ↑ INCREASED Gene Ontology (GO) Relation: this mechanism module involves this biological process This mechanism module involves increased Programmed necrotic cell death (GO:0097300). GO:0097300 is a biological process from the Gene Ontology. Inflammatory response GO:0006954 ↑ INCREASED Gene Ontology (GO) Relation: this mechanism module involves this biological process This mechanism module involves increased Inflammatory response (GO:0006954). GO:0006954 is a biological process from the Gene Ontology. Skeletal muscle tissue regeneration GO:0043403 ↓ DECREASED Gene Ontology (GO) Relation: this mechanism module involves this biological process This mechanism module involves decreased Skeletal muscle tissue regeneration (GO:0043403). GO:0043403 is a biological process from the Gene Ontology. Collagen fibril organization GO:0030199 ↑ INCREASED Gene Ontology (GO) Relation: this mechanism module involves this biological process This mechanism module involves increased Collagen fibril organization (GO:0030199). GO:0030199 is a biological process from the Gene Ontology. Fat cell differentiation GO:0045444 ↑ INCREASED Gene Ontology (GO) Relation: this mechanism module involves this biological process This mechanism module involves increased Fat cell differentiation (GO:0045444). GO:0045444 is a biological process from the Gene Ontology.
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Notes

This is a mechanism module, not a disease; do NOT create a "sarcolemmal fragility" or "myofiber necrosis" Disease entry from it. It is deliberately skeletal-muscle focused: the dystrophic cardiomyopathy arm belongs to cardiomyopathy_maladaptive_remodeling, and the generic bioenergetic arm to mitochondrial_dysfunction, so conforming disorders should route their cardiac nodes there rather than here. It is not an Xogenesis (pathological structure-formation) module. Scope and boundary decisions: (1) The membrane mechanical-fragility arm (Dystrophin-Glycoprotein Complex Mechanical Link Loss to Contraction-Induced Sarcolemmal Lesions) is solid for dystrophin, sarcoglycan, and alpha-dystroglycan hypoglycosylation; for laminin-alpha2 (LAMA2 / MDC1A) documented membrane rupture is contested, so those entries conform at Sarcolemmal Mechanical Fragility (vulnerability to contraction stress, which fits fibre detachment) rather than at Contraction-Induced Sarcolemmal Lesions, which asserts frank tracer-proven membrane tears. The curated MDC1A conformer (Contraction-Induced Myofibre Detachment and Mechanical Injury) does exactly this; its own evidence records that detached fibres retain membrane integrity. (2) A membrane-repair arm (Sarcolemmal Membrane Repair Failure) is where dysferlinopathy (DYSF) and anoctaminopathy (ANO5) enter: the DGC is intact but tears fail to reseal, so these conform at the repair node and the calcium node, bypassing the mechanical-link trigger. (3) Calpain-3 deficiency (CAPN3, LGMDR1) is OUT of scope as a conformer: calpain-3 is a titin-bound sarcomeric protease whose loss (not calcium-driven overactivation of ubiquitous mu/m-calpain) causes disease. (4) Modulator genes such as TRPC, ORAI1/STIM1 and PPIF are not disease genes here; they are represented through the calcium node and the drug-target treatments, not as genes on pathophysiology nodes. Modules bind GO and CL terms only (plus UBERON locations / GO cellular components) and do not use chemical (CHEBI) or disease (MONDO) term bindings in nodes; drug chemistry is carried in the treatments block's therapeutic_agent per the treatment schema. Worked conformers: Duchenne and Becker muscular dystrophy (dystrophinopathy), autosomal recessive limb-girdle muscular dystrophy (sarcoglycanopathy / dysferlinopathy), dystroglycanopathy, and congenital merosin-deficient muscular dystrophy 1A (LAMA2).
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Used By Disorder Entries

5
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Pathograph

Use the checkboxes to hide or show graph categories. Hover nodes for evidence-backed metadata.
Pathograph: causal mechanism network for Sarcolemmal Fragility and Myofiber Necrosis Module Interactive directed graph showing how this shared module's pathophysiology nodes connect.
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Pathophysiology

13
Sarcolemmal Membrane Repair Failure
trigger
An alternative upstream arm, independent of the DGC mechanical link. In healthy fibers, dysferlin-dependent vesicle fusion reseals sarcolemmal tears in a calcium-dependent membrane-repair response. Where the repair machinery is defective (dysferlinopathy, anoctaminopathy), the DGC is structurally intact but tears that normally reseal instead persist, so even ordinary contraction-induced lesions remain open conduits for calcium entry. This arm enters the shared chain at the calcium node, bypassing the mechanical-link trigger.
Skeletal muscle fiber CL:0008002 Cell Ontology (CL) Relation: this pathophysiological event involves this cell type This pathophysiological event involves Skeletal muscle fiber (CL:0008002). CL:0008002 is a cell type from the Cell Ontology.
Plasma membrane repair GO:0001778 ↓ DECREASED Gene Ontology (GO) Relation: this pathophysiological event involves this biological process This pathophysiological event involves decreased Plasma membrane repair (GO:0001778). GO:0001778 is a biological process from the Gene Ontology.
Show evidence (2 references)
PMID:12736685 SUPPORT Model Organism
"dysferlin-null mice maintain a functional dystrophin-glycoprotein complex but nevertheless develop a progressive muscular dystrophy"
Dysferlin-null mice show that muscular dystrophy can arise from a membrane-repair defect with an intact DGC, establishing this arm as independent of the mechanical-link trigger. Evidence source is MODEL_ORGANISM because the finding is from knockout mice.
PMID:12736685 SUPPORT Model Organism
"dysferlin-deficient muscle fibres are defective in Ca2+-dependent sarcolemma resealing"
Two-photon membrane-wounding assays show dysferlin-deficient fibers fail to reseal the sarcolemma, the molecular lesion of this repair-failure node. Evidence source is MODEL_ORGANISM because the assay was performed on mouse muscle fibers.
Sarcolemmal Mechanical Fragility
amplifier
With the cytoskeleton-to-matrix link gone, the sarcolemma loses the mechanical reinforcement the DGC normally provides and becomes abnormally vulnerable to the stresses developed during contraction. This is a change in the membrane's physical robustness that precedes any actual tear.
Skeletal muscle fiber CL:0008002 Cell Ontology (CL) Relation: this pathophysiological event involves this cell type This pathophysiological event involves Skeletal muscle fiber (CL:0008002). CL:0008002 is a cell type from the Cell Ontology.
Sarcolemma GO:0042383 Gene Ontology (GO) Relation: this pathophysiological event involves this cellular component This pathophysiological event involves Sarcolemma (GO:0042383). GO:0042383 is a cellular component from the Gene Ontology.
Show evidence (1 reference)
PMID:8475120 SUPPORT Model Organism
"These findings strongly support the proposition that the primary function of dystrophin is to provide mechanical reinforcement to the sarcolemma and thereby protect it from the membrane stresses developed during muscle contraction."
The mdx mouse study concludes that dystrophin's primary role is mechanical reinforcement of the sarcolemma against contraction stress, so its loss produces the membrane fragility of this node. Evidence source is MODEL_ORGANISM because the work was done in mdx mouse muscle.
Contraction-Induced Sarcolemmal Lesions
effector
Eccentric (lengthening) contractions impose the largest mechanical stress on the membrane, and in the fragile dystrophic sarcolemma they produce frank membrane lesions. These breaches are demonstrable because low-molecular-weight tracers that are excluded from healthy fibers (Evans blue dye, procion orange) now enter the cytoplasm, and the amount of damage scales with the magnitude of the mechanical stress rather than with the number of contractions.
Skeletal muscle fiber CL:0008002 Cell Ontology (CL) Relation: this pathophysiological event involves this cell type This pathophysiological event involves Skeletal muscle fiber (CL:0008002). CL:0008002 is a cell type from the Cell Ontology.
Sarcolemma GO:0042383 Gene Ontology (GO) Relation: this pathophysiological event involves this cellular component This pathophysiological event involves Sarcolemma (GO:0042383). GO:0042383 is a cellular component from the Gene Ontology.
Show evidence (2 references)
PMID:8475120 SUPPORT Model Organism
"The level of sarcolemmal damage is directly correlated with the magnitude of mechanical stress placed upon the membrane during contraction rather than the number of activations of the muscle."
Shows that sarcolemmal damage in mdx muscle scales with contraction-induced mechanical stress, establishing eccentric contraction as the source of the lesions. Evidence source is MODEL_ORGANISM because it is an mdx mouse contraction protocol.
PMID:9334342 SUPPORT Model Organism
"mdx mice, a dystrophin-deficient animal model for Duchenne muscular dystrophy, showed significant Evans blue accumulation in skeletal muscle fibers"
Evans blue dye enters dystrophin-deficient fibers but not healthy ones, directly demonstrating sarcolemmal breaches. Evidence source is MODEL_ORGANISM because the tracer study was done in mice (the same paper notes dy/dy laminin-alpha2 mice accumulate little dye, the basis of the LAMA2 caveat in notes).
Myofiber Cytosolic Calcium Overload
central effector
The rate-limiting central effector and the module's key conformance target. Calcium enters the fiber both through the membrane lesions and through stretch-activated and store-operated channels (TRPC and the Orai1-STIM1 complex) whose activity is increased in dystrophic muscle, raising cytosolic calcium above its normal tightly regulated level. This is where the mechanical-fragility arm and the membrane-repair-failure arm converge, and it is sufficient on its own: artificially raising calcium influx reproduces muscular dystrophy independent of membrane fragility, while enhancing calcium clearance is protective. Every conforming disorder funnels through this node.
Skeletal muscle fiber CL:0008002 Cell Ontology (CL) Relation: this pathophysiological event involves this cell type This pathophysiological event involves Skeletal muscle fiber (CL:0008002). CL:0008002 is a cell type from the Cell Ontology.
Calcium ion import across the sarcolemma GO:0098703 ↑ INCREASED Gene Ontology (GO) Relation: this pathophysiological event involves this biological process This pathophysiological event involves increased Calcium ion import across the sarcolemma, annotated with calcium ion import across plasma membrane (GO:0098703). GO:0098703 is a biological process from the Gene Ontology. Store-operated calcium entry GO:0002115 ↑ INCREASED Gene Ontology (GO) Relation: this pathophysiological event involves this biological process This pathophysiological event involves increased Store-operated calcium entry (GO:0002115). GO:0002115 is a biological process from the Gene Ontology.
Show evidence (4 references)
PMID:19864620 SUPPORT Model Organism
"Here we demonstrate that calcium itself is sufficient to cause a dystrophic phenotype in skeletal muscle independent of membrane fragility."
TRPC3 overexpression raises calcium influx and reproduces muscular dystrophy with no primary membrane defect, establishing cytosolic calcium overload as the sufficient central effector and justifying it as the key conformance target. Evidence source is MODEL_ORGANISM because it is a transgenic mouse experiment.
PMID:19864620 SUPPORT Model Organism
"These results demonstrate that calcium itself is sufficient to induce muscular dystrophy in vivo, and that TRPC channels are key disease initiators downstream of the unstable membrane that characterizes many types of muscular dystrophy."
Identifies TRPC channels as a calcium-entry route downstream of the unstable membrane across many dystrophies, supporting the channel arm of this node. Evidence source is MODEL_ORGANISM because it is an in vivo mouse study.
PMID:35939054 SUPPORT Model Organism
"Enhanced store-operated Ca2+ entry (SOCE), a Ca2+ influx mechanism coordinated by STIM1 sensors of luminal Ca2+ within the sarcoplasmic reticulum (SR) and Ca2+-permeable Orai1 channels in the sarcolemma, is proposed to contribute to Ca2+-mediated muscle damage in DMD."
Documents the store-operated Orai1-STIM1 calcium-entry route as a contributor to calcium-mediated damage in DMD, supporting the SOCE process on this node. Evidence source is MODEL_ORGANISM because the dystrophic model is the mdx mouse.
+ 1 more reference
Calpain Activation
effector
Sustained cytosolic calcium activates the ubiquitous calcium-dependent cysteine proteases (mu- and m-calpain), which degrade myofibrillar and membrane-cytoskeletal substrates. Inhibiting these calpains with a calpastatin transgene reduces necrosis without changing the upstream membrane damage, placing calpain activation downstream of the primary defect as a killing arm rather than a cause.
Skeletal muscle fiber CL:0008002 Cell Ontology (CL) Relation: this pathophysiological event involves this cell type This pathophysiological event involves Skeletal muscle fiber (CL:0008002). CL:0008002 is a cell type from the Cell Ontology.
Show evidence (1 reference)
PMID:12354790 SUPPORT Model Organism
"Membrane damage, as assessed by procion orange and creatine kinase assays, was unchanged, supporting the idea that calpains act downstream of the primary muscle defect."
Calpastatin overexpression in mdx muscle reduces necrosis while leaving membrane damage unchanged, establishing calpain activation as a downstream killing step rather than the primary lesion. Evidence source is MODEL_ORGANISM because it is a transgenic mdx mouse.
Mitochondrial Permeability Transition
effector
Cytosolic calcium overload loads the mitochondria with calcium and opens the mitochondrial permeability transition pore (MPTP), whose components include the adenine nucleotide translocase and whose opening requires cyclophilin D. Pore opening collapses the mitochondrial membrane potential and precipitates necrotic fiber death. Genetic deletion of cyclophilin D (Ppif) or of ANT1 (Slc25a4) protects dystrophic muscle, and this arm is shared by non-DGC myopathies (for example collagen VI myopathy) that converge on the pore.
Skeletal muscle fiber CL:0008002 Cell Ontology (CL) Relation: this pathophysiological event involves this cell type This pathophysiological event involves Skeletal muscle fiber (CL:0008002). CL:0008002 is a cell type from the Cell Ontology.
Mitochondrial calcium ion transmembrane transport GO:0006851 ↑ INCREASED Gene Ontology (GO) Relation: this pathophysiological event involves this biological process This pathophysiological event involves increased Mitochondrial calcium ion transmembrane transport (GO:0006851). GO:0006851 is a biological process from the Gene Ontology. positive regulation of mitochondrial membrane permeability GO:0035794 ↑ INCREASED Gene Ontology (GO) Relation: this pathophysiological event involves this biological process This pathophysiological event involves increased positive regulation of mitochondrial membrane permeability (GO:0035794). GO:0035794 is a biological process from the Gene Ontology.
Mitochondrial permeability transition pore complex GO:0005757 Gene Ontology (GO) Relation: this pathophysiological event involves this cellular component This pathophysiological event involves Mitochondrial permeability transition pore complex (GO:0005757). GO:0005757 is a cellular component from the Gene Ontology.
Show evidence (2 references)
PMID:18345011 SUPPORT Model Organism
"deletion of the gene encoding cyclophilin D (Ppif) rendered mitochondria largely insensitive to the calcium overload-induced swelling associated with a defective sarcolemma, thus reducing myofiber necrosis in two distinct models of muscular dystrophy"
Cyclophilin-D deletion makes mitochondria insensitive to calcium-overload swelling and cuts necrosis in two dystrophy models, establishing the calcium-driven permeability transition as the route to fiber death. Evidence source is MODEL_ORGANISM because it is a mouse knockout study.
DOI:10.1126/sciadv.adi2767 SUPPORT Model Organism
"This study provides direct evidence that ANT1 and CypD are required MPTP components governing in vivo cell death"
In vivo deletion of ANT1 and cyclophilin D in a dystrophic mouse shows both are required MPTP components governing necrotic death, identifying the pore molecularly. Evidence source is MODEL_ORGANISM because it is a mouse genetic study.
Myofiber Necrosis
effector
Calpain activity and mitochondrial permeability transition together kill the muscle fiber by necrosis. Mitochondrial-dependent necrosis is a prominent and rate-contributing mechanism of fiber loss across muscular dystrophies, and the dying fiber is the source of the inflammation, regeneration demand, and enzyme leakage that follow.
Skeletal muscle fiber CL:0008002 Cell Ontology (CL) Relation: this pathophysiological event involves this cell type This pathophysiological event involves Skeletal muscle fiber (CL:0008002). CL:0008002 is a cell type from the Cell Ontology.
Programmed necrotic cell death GO:0097300 ↑ INCREASED Gene Ontology (GO) Relation: this pathophysiological event involves this biological process This pathophysiological event involves increased Programmed necrotic cell death (GO:0097300). GO:0097300 is a biological process from the Gene Ontology.
Show evidence (2 references)
PMID:18345011 SUPPORT Model Organism
"Thus, mitochondrial-dependent necrosis represents a prominent disease mechanism in muscular dystrophy"
States that mitochondrial-dependent necrosis is a prominent disease mechanism in muscular dystrophy, the fiber-death node. Evidence source is MODEL_ORGANISM because the conclusion rests on mouse dystrophy models.
PMID:23620650 SUPPORT REVIEW SYNTHESIS Other
"Originating from vulnerable myofibres, muscle cell necrosis and inflammatory processes are present in DMD."
A DMD review states that necrosis of vulnerable myofibers and inflammation are present, linking fiber death to the downstream inflammatory node. Evidence source is OTHER and quote_role REVIEW_SYNTHESIS because this is a review article.
Creatine Kinase Leakage into Serum
consequence
Because the necrotic fiber's membrane is breached and permeable, soluble cytoplasmic enzymes - most prominently creatine kinase - escape into the circulation, producing the markedly elevated serum creatine kinase that is the hallmark laboratory readout of active myofiber damage in these diseases. This is a systemic consequence of fiber necrosis rather than a step that drives further pathology.
Show evidence (1 reference)
PMID:21084059 SUPPORT REVIEW SYNTHESIS Other
"increased membrane permeability which allows soluble enzymes such as creatine kinase to leak out of the cell and ions such as calcium to enter the cell"
States that the permeable dystrophic membrane lets creatine kinase leak out while calcium enters, the basis of the serum-CK readout node. Evidence source is OTHER and quote_role REVIEW_SYNTHESIS because this is a review of the permeability mechanism.
Necrosis-Driven Muscle Inflammation
effector
Necrotic fibers release damage signals that recruit and activate macrophages into the muscle. In the dystrophic environment the pro-inflammatory (M1) macrophage phenotype worsens fiber injury, so the inflammatory infiltrate is not merely reactive but amplifies the damage and shapes the regenerative response that follows.
Macrophage CL:0000235 Cell Ontology (CL) Relation: this pathophysiological event involves this cell type This pathophysiological event involves Macrophage (CL:0000235). CL:0000235 is a cell type from the Cell Ontology.
Inflammatory response GO:0006954 ↑ INCREASED Gene Ontology (GO) Relation: this pathophysiological event involves this biological process This pathophysiological event involves increased Inflammatory response (GO:0006954). GO:0006954 is a biological process from the Gene Ontology.
Show evidence (2 references)
PMID:21118895 SUPPORT Model Organism
"M1 macrophages play a major role in worsening muscle injury in the mdx mouse model of Duchenne muscular dystrophy."
Establishes that M1 macrophages actively worsen muscle injury in dystrophic muscle, supporting inflammation as a damage-amplifying node. Evidence source is MODEL_ORGANISM because the work is in the mdx mouse.
PMID:23620650 SUPPORT REVIEW SYNTHESIS Other
"Originating from vulnerable myofibres, muscle cell necrosis and inflammatory processes are present in DMD."
Links myofiber necrosis to the inflammatory processes of DMD, the necrosis-to-inflammation edge. Evidence source is OTHER and quote_role REVIEW_SYNTHESIS because this is a review.
Exhausted Satellite-Cell Regeneration
effector
Each round of necrosis demands repair by muscle satellite cells. Repeated degeneration-regeneration cycles progressively deplete the satellite-cell pool and its proliferative capacity, so regeneration eventually fails to keep pace with fiber loss. This cell-autonomous decline in regenerative capacity is a major determinant of disease progression, and in humans satellite-cell / myoblast proliferative capacity is already defective.
Skeletal muscle satellite cell CL:0000594 Cell Ontology (CL) Relation: this pathophysiological event involves this cell type This pathophysiological event involves Skeletal muscle satellite cell (CL:0000594). CL:0000594 is a cell type from the Cell Ontology.
Skeletal muscle tissue regeneration GO:0043403 ↓ DECREASED Gene Ontology (GO) Relation: this pathophysiological event involves this biological process This pathophysiological event involves decreased Skeletal muscle tissue regeneration (GO:0043403). GO:0043403 is a biological process from the Gene Ontology.
Show evidence (2 references)
PMID:21145579 SUPPORT Model Organism
"DMD progression results, in part, from a cell-autonomous failure of MuSC to maintain the damage-repair cycle initiated by dystrophin deficiency."
The mdx/mTR model shows DMD progression stems from cell-autonomous satellite-cell (MuSC) failure to sustain the repair cycle, the basis of this regeneration-exhaustion node. Evidence source is MODEL_ORGANISM because it is a mouse genetic model.
PMID:6576361 SUPPORT In Vitro
"A defect in the proliferative capacity of satellite cells, mononucleated precursors of mature muscle fibers, was found in clonal analyses of cells cultured from Duchenne muscular dystrophy (DMD) patients."
Clonal analysis of DMD patient-derived cells shows a defect in satellite cell proliferative capacity, the human correlate of the exhaustion node. Evidence source is IN_VITRO because the defect was measured in cultured patient myoblasts.
Fibro-Adipose Replacement of Muscle
effector
When regeneration can no longer replace lost fibers, resident platelet-derived growth factor receptor alpha (PDGFRalpha)-positive fibro-adipogenic progenitors proliferate and differentiate into collagen-producing fibroblasts and adipocytes, replacing contractile muscle with fibrous and fatty tissue. These interstitial mesenchymal progenitors - distinct from satellite cells - are the common origin of both the fibrosis and the fat. This node is the muscle-specific instance of the generic fibrotic mesenchymal-cell activation step.
Fibro-adipogenic progenitor (PDGFRalpha+ mesenchymal cell) CL:0008019 Cell Ontology (CL) Relation: this pathophysiological event involves this cell type This pathophysiological event involves Fibro-adipogenic progenitor (PDGFRalpha+ mesenchymal cell), annotated with mesenchymal cell (CL:0008019). CL:0008019 is a cell type from the Cell Ontology.
Collagen fibril organization GO:0030199 ↑ INCREASED Gene Ontology (GO) Relation: this pathophysiological event involves this biological process This pathophysiological event involves increased Collagen fibril organization (GO:0030199). GO:0030199 is a biological process from the Gene Ontology. Fat cell differentiation GO:0045444 ↑ INCREASED Gene Ontology (GO) Relation: this pathophysiological event involves this biological process This pathophysiological event involves increased Fat cell differentiation (GO:0045444). GO:0045444 is a biological process from the Gene Ontology.
Show evidence (2 references)
PMID:20081842 SUPPORT Model Organism
"PDGFRalpha(+) mesenchymal progenitors are the major contributor to ectopic fat cell formation in skeletal muscle"
Identifies interstitial PDGFRalpha+ mesenchymal progenitors, distinct from satellite cells, as the source of ectopic muscle fat, the adipose arm of this replacement node. Evidence source is MODEL_ORGANISM because the lineage work was done in mouse muscle.
PMID:22045730 SUPPORT Model Organism
"PDGFRα(+) cells accumulated in fibrotic areas of the diaphragm in the mdx mouse, a model of Duchenne muscular dystrophy."
Shows the same PDGFRalpha+ progenitors accumulate in and produce the fibrosis of mdx diaphragm, the fibrotic arm of this node and the basis for its conformance to the generic fibrotic mesenchymal-activation step. Evidence source is MODEL_ORGANISM because it is the mdx mouse.
Progressive Muscle Weakness
consequence
The organism-level end state. Cumulative fiber loss, failed regeneration, and replacement of contractile tissue by fibrosis and fat reduce functional muscle mass, so strength declines progressively. This is the shared clinical consequence toward which every conforming dystrophy converges, varying only in tempo and distribution by disorder.
Show evidence (3 references)
PMID:26676145 SUPPORT REVIEW SYNTHESIS Other
"repeated bouts of muscle damage lead to atrophy and fibrosis, and eventually muscle degeneration"
States that repeated muscle damage culminates in atrophy, fibrosis, and muscle degeneration, the progressive-weakness end state. Evidence source is OTHER and quote_role REVIEW_SYNTHESIS because this is a review.
PMID:23620650 SUPPORT REVIEW SYNTHESIS Other
"Severity was gauged by muscle strength and age at loss of ambulation."
Ties disease severity directly to declining muscle strength and loss of ambulation - the progressive loss of strength this node names.
PMID:23620650 SUPPORT REVIEW SYNTHESIS Other
"Muscular recovery is limited due to the limited number and capacity of satellite cells."
Links limited satellite-cell number and capacity to limited muscular recovery, the regeneration-failure contribution to progressive weakness. Evidence source is OTHER and quote_role REVIEW_SYNTHESIS because this is a review.
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Treatments

3
Corticosteroid Therapy (Prednisone or Deflazacort)
Pharmacotherapy NCIT:C15986 NCI Thesaurus (NCIT) Relation: this treatment is this clinical intervention This treatment is Pharmacotherapy (NCIT:C15986). NCIT:C15986 is a clinical intervention from the NCI Thesaurus.
Agent: prednisone CHEBI:8382 Chemical Entities of Biological Interest (CHEBI) Relation: this treatment uses this therapeutic agent This treatment uses prednisone (CHEBI:8382). CHEBI:8382 is a therapeutic agent from Chemical Entities of Biological Interest. deflazacort CHEBI:135720 Chemical Entities of Biological Interest (CHEBI) Relation: this treatment uses this therapeutic agent This treatment uses deflazacort (CHEBI:135720). CHEBI:135720 is a therapeutic agent from Chemical Entities of Biological Interest.
Platform: Small molecule
Daily glucocorticoids - prednisone/prednisolone or deflazacort - are the long-standing standard-of-care pharmacotherapy that preserves muscle strength in Duchenne muscular dystrophy. Their precise mechanism is debated - proposed actions include anti-inflammatory effects, membrane stabilization, and effects on regeneration - and the trial evidence shows a clinical strength benefit rather than action on any single node. They are placed on the inflammatory node here because dampening the macrophage-driven inflammation that amplifies myofiber injury is the best-characterized of those actions; they do not restore the upstream mechanical link.
Mechanism target:
INHIBITS Necrosis-Driven Muscle Inflammation — Glucocorticoids are proposed to suppress the pro-inflammatory macrophage response that worsens fiber injury; this is the best-characterized of several debated actions, and the cited trial shows a strength benefit rather than a node-specific effect.
Evidence: 1
Cyclophilin D / mPTP Inhibition (Alisporivir / Debio-025, experimental)
Pharmacotherapy NCIT:C15986 NCI Thesaurus (NCIT) Relation: this treatment is this clinical intervention This treatment is Pharmacotherapy (NCIT:C15986). NCIT:C15986 is a clinical intervention from the NCI Thesaurus.
Agent: alisporivir CHEBI:149837 Chemical Entities of Biological Interest (CHEBI) Relation: this treatment uses this therapeutic agent This treatment uses alisporivir (CHEBI:149837). CHEBI:149837 is a therapeutic agent from Chemical Entities of Biological Interest.
Platform: Small molecule
An experimental, not yet approved, strategy that targets the permeability-transition node directly. Debio-025 (alisporivir) is a non-immunosuppressive cyclophilin inhibitor that desensitizes the mitochondrial permeability transition pore, reducing calcium-overload-driven necrosis. In mdx and sarcoglycan-null mice it reduces dystrophic pathology at least as effectively as prednisone. It illustrates the module's drug-target pattern of acting on a specific internal node (here the mitochondrial pore) rather than the upstream genetic lesion.
Mechanism target:
INHIBITS Mitochondrial Permeability Transition — Cyclophilin inhibition desensitizes the mitochondrial permeability transition pore, blocking the calcium-driven route to necrotic fiber death.
Evidence: 1
Micro-dystrophin Gene Replacement
Gene Therapy NCIT:C15238 NCI Thesaurus (NCIT) Relation: this treatment is this clinical intervention This treatment is Gene Therapy (NCIT:C15238). NCIT:C15238 is a clinical intervention from the NCI Thesaurus.
Platform: Gene therapy
Gene-replacement therapy delivering a truncated but functional micro-dystrophin by AAV vector aims to restore the cytoskeleton-to-matrix mechanical link at the trigger node, so the sarcolemma regains mechanical protection and the whole downstream chain is pre-empted. Highly functional micro-dystrophins protect dystrophic muscle from contraction-induced damage in mice, and systemic AAV micro-dystrophin has entered clinical testing in DMD.
Mechanism target:
INHIBITS Dystrophin-Glycoprotein Complex Mechanical Link Loss — Restoring a functional (micro-)dystrophin re-establishes the cytoskeleton to extracellular-matrix mechanical link, acting at the trigger node to pre-empt the downstream chain.
Evidence: 2