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Pathophysiology Nodes

5
5 shared nodes are defined in this module.
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Cell Types

0
No cell types are annotated for this module.
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Biological Processes

4
Ergosterol Biosynthetic Process GO:0006696 ↑ INCREASED Gene Ontology (GO) Relation: this mechanism module involves this biological process This mechanism module involves increased Ergosterol Biosynthetic Process (GO:0006696). GO:0006696 is a biological process from the Gene Ontology. Response to Oxidative Stress GO:0006979 ↑ INCREASED Gene Ontology (GO) Relation: this mechanism module involves this biological process This mechanism module involves increased Response to Oxidative Stress (GO:0006979). GO:0006979 is a biological process from the Gene Ontology. Cytolysis GO:0019835 ↑ INCREASED Gene Ontology (GO) Relation: this mechanism module involves this biological process This mechanism module involves increased Cytolysis (GO:0019835). GO:0019835 is a biological process from the Gene Ontology. Ergosterol Biosynthetic Process GO:0006696 ↓ DECREASED Gene Ontology (GO) Relation: this mechanism module involves this biological process This mechanism module involves decreased Ergosterol Biosynthetic Process (GO:0006696). GO:0006696 is a biological process from the Gene Ontology.
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Notes

This is an antifungal drug-mechanism module structured as a biological cascade, not a specific disease. Its nodes are successive steps of the polyene mechanism on the ergosterol membrane (ergosterol-enriched membrane -> polyene binding and ergosterol extraction / pore formation -> membrane permeabilization, ion leakage and oxidative damage -> fungicidal cell death), with an adaptive-escape resistance branch; the polyene drug class (amphotericin B, nystatin) is described in the node text rather than modelled as a separate node. Disorder entries reference individual nodes via conforms_to (e.g., "fungal_membrane_ergosterol_binding#Polyene Binding and Ergosterol Extraction / Pore Formation"), and their polyene treatments point at the inhibited node via target_mechanisms (analogous to how cell-wall-active antibiotic treatments link to "bacterial_cell_wall_synthesis_inhibition#Peptidoglycan Cross-Linking by Penicillin-Binding Proteins"). Key conformance / treatment target: "Polyene Binding and Ergosterol Extraction / Pore Formation" — the sterol-sponge / pore-forming step at which amphotericin B and nystatin engage membrane ergosterol. This module is complementary to the proposed fungal_ergosterol_synthesis_inhibition module — azoles/allylamines block ergosterol synthesis while polyenes bind the finished sterol — so a single fungal disease may conform to both. The resistance node captures the gating knowledge that distinguishes "a polyene is used" from durable activity: rare ergosterol-depletion resistance, plus the imperfect ergosterol-vs-cholesterol selectivity that drives amphotericin B host toxicity. See projects/ANTIFUNGAL.md.
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Used By Disorder Entries

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Pathograph

Use the checkboxes to hide or show graph categories. Hover nodes for evidence-backed metadata.
Pathograph: causal mechanism network for Fungal Membrane Ergosterol Binding Module Interactive directed graph showing how this shared module's pathophysiology nodes connect.
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Pathophysiology

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Ergosterol-Enriched Fungal Plasma Membrane
trigger
Ergosterol is the principal sterol of the fungal plasma membrane and the eukaryotic counterpart of mammalian cholesterol, regulating membrane fluidity, microdomain organization, endocytosis, and the function of many membrane proteins. The synthesis and enrichment of ergosterol in the bilayer creates the fungal-specific physical target that polyene antifungals recognize: polyenes bind ergosterol far more avidly than they bind the cholesterol of mammalian membranes, and the conservation of ergosterol as the dominant fungal sterol is what makes the polyene class broad-spectrum across yeasts and molds. This is the upstream trigger of the cascade — the drug-bindable membrane sterol whose presence licenses the entire polyene mechanism.
Ergosterol Biosynthetic Process GO:0006696 ↑ INCREASED Gene Ontology (GO) Relation: this pathophysiological event involves this biological process This pathophysiological event involves increased Ergosterol Biosynthetic Process (GO:0006696). GO:0006696 is a biological process from the Gene Ontology.
Show evidence (1 reference)
PMID:31643715 SUPPORT Other
"Polyene antifungals have an amphiphilic structure which binds to ergosterol"
LiverTox review establishing that polyene antifungals act by binding the fungal membrane sterol ergosterol — the membrane sterol this trigger node represents. Evidence source is OTHER as this is a review article.
Polyene Binding and Ergosterol Extraction / Pore Formation
therapeutic vulnerability
Polyene antifungals — amphotericin B and nystatin — are amphiphilic macrolactones that engage membrane ergosterol directly rather than inhibiting an enzyme. In the dominant "sterol sponge" mechanism, large extramembranous amphotericin B aggregates physically extract ergosterol out of the lipid bilayer; a minor membrane-inserted fraction additionally assembles ion-conducting pores. Ergosterol binding (not the channel-forming capacity) is the event essential for fungicidal action, so this binding-and-extraction step is the committed mechanistic core of the cascade and the canonical conformance / treatment target of the module. Conforming polyene treatments point their target_mechanisms edge at this node.
Show evidence (2 references)
PMID:24681535 SUPPORT In Vitro
"binding ergosterol (Erg) (Fig. 1a) is essential"
Solid-state NMR / cell-based study showing that ergosterol binding (rather than channel formation) is essential for amphotericin B's fungicidal action, defining this binding step as the drug-target core. Evidence source is IN_VITRO as this is a biophysical and cell-based mechanistic study.
PMID:24681535 SUPPORT In Vitro
"amphotericin exists primarily in the form of large, extramembranous aggregates that kill yeast by extracting ergosterol from lipid bilayers"
Demonstrates the sterol-sponge mechanism — extraction of ergosterol from the membrane into extramembranous aggregates is the molecular action of this node. Evidence source is IN_VITRO as this is a biophysical and cell-based study.
Membrane Permeabilization, Ion Leakage and Oxidative Damage
effector
Extraction of ergosterol and the minor pore-forming fraction together breach the integrity of the fungal plasma membrane. Depletion of the sterol disables the many membrane proteins and cellular processes that depend on ergosterol, while the loss of membrane integrity allows leakage of potassium and other ions and is accompanied by oxidative injury. This is the effector step that converts the upstream physical binding event into lethal cellular damage; the same sterol-extracting activity acting on host-cell cholesterol underlies amphotericin B's dose-limiting toxicity.
Response to Oxidative Stress GO:0006979 ↑ INCREASED Gene Ontology (GO) Relation: this pathophysiological event involves this biological process This pathophysiological event involves increased Response to Oxidative Stress (GO:0006979). GO:0006979 is a biological process from the Gene Ontology.
Show evidence (1 reference)
PMID:24681535 SUPPORT In Vitro
"parallel potassium efflux experiments revealed readily observable membrane permeabilization"
Confirms the membrane-permeabilizing / ion-leakage component (potassium efflux) that accompanies sterol extraction at this effector step. Evidence source is IN_VITRO as this is a liposome-based biophysical assay.
Fungicidal Cell Death
consequence
The combined sterol depletion and membrane permeabilization are fungicidal rather than merely fungistatic: the fungal plasma membrane is converted to a more crystalline, leaky state and the cell undergoes osmotic collapse and lysis. This fungicidal endpoint — cell killing rather than growth arrest — is the therapeutic consequence of engaging the ergosterol target and is the basis for amphotericin B's role in severe, disseminated, and life-threatening mycoses (with nystatin used topically).
Cytolysis GO:0019835 ↑ INCREASED Gene Ontology (GO) Relation: this pathophysiological event involves this biological process This pathophysiological event involves increased Cytolysis (GO:0019835). GO:0019835 is a biological process from the Gene Ontology.
Show evidence (1 reference)
PMID:31643715 SUPPORT Other
"converting the fluid cell membrane of the fungal cell into a more crystalline state increasing permeability and precipitating cell lysis"
LiverTox review directly states the fungicidal consequence of polyene ergosterol binding — increased membrane permeability and precipitation of fungal cell lysis. Evidence source is OTHER as this is a review article.
Polyene Resistance via Reduced Membrane Ergosterol
adaptive escape
Because polyenes recognize the membrane sterol rather than a mutable enzyme active site, clinically significant resistance is uncommon — the drug would have to select against the cell's entire ergosterol-dependent membrane biology, a high genetic barrier. When polyene resistance does arise, it is typically through reduced membrane ergosterol content: loss-of-function changes in the ERG ergosterol-biosynthesis pathway (e.g. ERG2, ERG3, ERG6, ERG11) cause the fungus to accumulate alternative sterols/precursors that polyenes bind poorly, so there is less drug-bindable target in the membrane. This trade-off usually impairs membrane fitness and virulence, which is part of why such resistance is rare in the clinic. This adaptive-escape branch off the binding/extraction node documents the gating knowledge that distinguishes "a polyene is being used" from durable activity and explains why polyene resistance, when present, often co-occurs with susceptibility shifts at the ergosterol-synthesis (azole) target.
Ergosterol Biosynthetic Process GO:0006696 ↓ DECREASED Gene Ontology (GO) Relation: this pathophysiological event involves this biological process This pathophysiological event involves decreased Ergosterol Biosynthetic Process (GO:0006696). GO:0006696 is a biological process from the Gene Ontology.
Show evidence (2 references)
PMID:37998390 SUPPORT Other
"ergosterol biosynthesis pathway mutations (ERG11 and UPC2)"
Review of Candida antifungal resistance documenting that mutations in the ergosterol-biosynthesis pathway alter membrane sterol content, the basis of polyene resistance via reduced drug-bindable ergosterol. Evidence source is OTHER as this is a literature review.
PMID:37998390 SUPPORT Other
"polyenes (amphotericin B and nystatin)"
Confirms the review covers resistance mechanisms for the polyene class (amphotericin B, nystatin) addressed by this node. Evidence source is OTHER as this is a literature review.