Bacterial RNA Polymerase (Rifamycin Target)
therapeutic vulnerability
Bacterial DNA-dependent RNA polymerase (RNAP) performs the first step of gene expression, transcribing DNA into RNA. Rifamycins bind the RpoB (beta) subunit within the RNA exit channel and sterically block elongation of the nascent RNA chain past 2-3 nucleotides, arresting transcription. The bacterial RNAP sequence diverges sufficiently from the human enzyme to make this target selective, and rifamycins penetrate host cells and biofilms well, extending their utility to mycobacterial, intracellular, and device-associated infection.
Used by disorders
Buruli ulcer
as Mycobacterial RNA Polymerase (Rifampicin Target)
Leprosy
as Mycobacterial RNA Polymerase (Rifampicin Target)
Downstream
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rpoB-Mediated Rifamycin Resistance
Single rpoB point mutations confer high-level resistance, which is why rifamycins are used in combination.
Show evidence (2 references)
"The most clinically important and extensively studied class of antibiotics known to inhibit bacterial RNAP are the rifamycins."
Review establishing bacterial RNA polymerase as the rifamycin target, the step this node represents. Evidence source is OTHER as this is a review.
"the sequence divergence between bacterial and human RNAPs makes the bacterial RNAP a promising target for antibiotic development."
Supports the selectivity basis (bacterial vs human RNAP divergence) noted in this node. Evidence source is OTHER as this is a review article.