Normal function · from ai-gene-review (Q96PY6, commit 79fe13b38970) · AI-generated, not KB evidence

NEK1 is a NIMA-related serine/threonine protein kinase with an N-terminal catalytic domain and an extended regulatory region. It forms a stable cellular complex with CFAP410 (C21ORF2) and acts in primary-cilium assembly and genome maintenance. NEK1 kinase activity limits centriole microtubule elongation through a pathway operating alongside CP110-CEP97, and is required for normal ciliogenesis, while nuclear and cytoplasmic pools support DNA-damage checkpoint signaling and homologous-recombination repair. NEK1 helps maintain the ATR-ATRIP signaling complex and also phosphorylates VDAC1 in a mitochondrial-associated pathway that limits injury-induced cell death. In human motor-neuron models, NEK1 loss also perturbs microtubule homeostasis and nuclear import. Biallelic loss of function causes skeletal ciliopathies, and other NEK1 variants confer susceptibility to amyotrophic lateral sclerosis.

Catalyzes protein phosphorylation that restrains centriolar microtubule elongation and supports normal primary-cilium assembly. The length-control pathway acts alongside CP110-CEP97, and CFAP410 association supports ciliogenesis; the physiological substrates remain unresolved.
Uses kinase activity to support DNA-damage checkpoint signaling and homologous-recombination repair. NEK1 primes ATR-ATRIP signaling; its relevant substrate assignments in repair remain incompletely resolved.
Phosphorylates VDAC1 at Ser193 in an experimentally characterized mitochondrial survival pathway that limits injury-induced apoptotic signaling.
molecular function: protein serine kinase activity · directly involved in: negative regulation of apoptotic process · locations: mitochondrion
In the knowledge base · computed from kb/ at build time

Disorders

Relationship is the entry's genetic[].relationship_type. untyped means the entry has a genetic record for the gene but does not type it; its free-text association is shown instead.

DisorderRelationshipWhere the gene appears
Amyotrophic Lateral Sclerosis susceptibility
Axial Spondylometaphyseal Dysplasia causative
variant: NEK1 c.3107C>G (p.Ser1036Ter); NEK1 c.3830A>C (p.Asp1277Ala)
Short-Rib Thoracic Dysplasia 6 With or Without Polydactyly causative
mechanism: NEK1 Loss of Function
animal model: kat2J Nek1-deficient mouse
ClinGen gene–disease validity · snapshot 2026-10-03 · matched to entries by MONDO

An entry matches when ClinGen's MONDO disease is the entry's own disease term, a subtype term, or an exact-match mapping. An amber status marks an entry ClinGen supports the gene for (Definitive, Strong or Moderate) whose own record does not type it. A Limited, Disputed or Refuted tier on such an entry is not a gap.

ClinGen diseaseMOIClassificationdismech entry
amyotrophic lateral sclerosis, susceptibility to, 24 MONDO:0054750 AD Definitive
2022-04-29
no dismech entry

Identity from HGNC (snapshot 2026-10-01). Page layers are described in the gene pages documentation.