Aliases: GBP, LCEH, LCHAD, MTPA.
HADHA encodes the alpha subunit of the mitochondrial trifunctional protein (MTP/TFP), a heterotetrameric complex (alpha2-beta2) with HADHB that is bound to the matrix face of the mitochondrial inner membrane and catalyzes the last three steps of long-chain fatty acid beta-oxidation. The alpha subunit carries TWO of these activities: long-chain enoyl-CoA hydratase (LCEH, EC 4.2.1.17), which hydrates 2-trans-enoyl-CoA to (3S)-3-hydroxyacyl-CoA, and long-chain 3-hydroxyacyl-CoA dehydrogenase (LCHAD, EC 1.1.1.211), which oxidizes (3S)-3-hydroxyacyl-CoA to 3-oxoacyl-CoA using NAD+. The third step (thiolytic cleavage to acetyl-CoA) is carried by the beta subunit (HADHB). The enzyme is specific for long-chain (C10-C16) acyl-CoA substrates, including saturated and unsaturated species. Independently of the beta subunit, the alpha subunit also exhibits a monolysocardiolipin acyltransferase activity that participates in cardiolipin remodeling. Deficiency of HADHA causes isolated LCHAD deficiency and generalized mitochondrial trifunctional protein deficiency, presenting with hypoketotic hypoglycemia, cardiomyopathy, peripheral neuropathy and pigmentary retinopathy, and associated with maternal HELLP syndrome / acute fatty liver of pregnancy.
Relationship is the entry's genetic[].relationship_type. untyped means the entry has a genetic record for the gene but does not type it; its free-text association is shown instead.
| Disorder | Relationship | Where the gene appears |
|---|---|---|
| HELLP Syndrome | modifier germline |
mechanism: Fetal Long-Chain Fatty-Acid Oxidation Defect
|
| Long-chain 3-hydroxyacyl-CoA Dehydrogenase Deficiency | untyped |
mechanism: HADHA molecular function deficiency within mitochondrial trifunctional protein
|
| Mitochondrial Trifunctional Protein Deficiency | untyped |
mechanism: HADHA/HADHB molecular function deficiency in mitochondrial trifunctional protein
|
An entry matches when ClinGen's MONDO disease is the entry's own disease term, a subtype term, or an exact-match mapping. An amber status marks an entry ClinGen supports the gene for (Definitive, Strong or Moderate) whose own record does not type it. A Limited, Disputed or Refuted tier on such an entry is not a gap.
| ClinGen disease | MOI | Classification | dismech entry |
|---|---|---|---|
| long chain 3-hydroxyacyl-CoA dehydrogenase deficiency MONDO:0012173 | AR | Definitive 2018-02-12 |
Identity from HGNC (snapshot 2026-10-01). Page layers are described in the gene pages documentation.