Normal function · from ai-gene-review (Q3SYG4, commit 79fe13b38970) · AI-generated, not KB evidence

BBS9 (PTHB1) is a core structural subunit of the BBSome, an octameric coat-like adaptor complex (BBS1, BBS2, BBS4, BBS5, BBS7, BBS8/TTC8, BBS9 and BBIP1/BBIP10) that sorts and traffics specific membrane and signaling-receptor cargo into and out of the primary cilium in conjunction with intraflagellar transport (IFT) and the small GTPase ARL6/BBS3. The N-terminal ~407 residues fold into a seven-bladed beta-propeller, followed by gamma-adaptin-ear (GAE), platform, hairpin and a C-terminal alpha-helical region; together with BBS2 and BBS7, BBS9 forms the central scaffold that organizes the complex. BBSome assembly is chaperonin-assisted (BBS6/BBS10/BBS12 with CCT/TRiC), and BBS9 stability is required for assembly. The protein localizes to nonmembranous centriolar satellites and the pericentriolar region in the cytoplasm and to the ciliary membrane, transition zone and tip. Its ciliary trafficking is regulated by partners including LZTFL1, ARL6/BBS3, AZI1/CEP131 and the NPHP5(IQCB1)/CEP290 module. Loss-of-function mutations (e.g. the destabilizing G141R variant) cause autosomal-recessive Bardet-Biedl syndrome, a ciliopathy featuring retinal degeneration, obesity, polydactyly, hypogenitalism, renal anomalies and cognitive impairment.

As a core structural/scaffolding subunit of the BBSome (with BBS2 and BBS7), BBS9 contributes to the BBSome's cargo-sorting coat-adaptor activity, mediating trafficking of specific membrane and signaling-receptor cargo into and within the primary cilium (protein localization to cilium).
molecular function: structural molecule activity · directly involved in: protein localization to cilium · locations: ciliary membrane; cilium
In the knowledge base · computed from kb/ at build time

Disorders

Relationship is the entry's genetic[].relationship_type. untyped means the entry has a genetic record for the gene but does not type it; its free-text association is shown instead.

DisorderRelationshipWhere the gene appears
Bardet-Biedl syndrome untyped
Pathogenic biallelic variants
mechanism: BBSome subunit deficiency
BBSome-related retinitis pigmentosa untyped
Pathogenic biallelic variants, including a hypomorphic splice-affecting allele
mechanism: Partial or retina-selective BBSome dysfunction
subtype: BBS9 isolated RP
scoped to subtype: BBS9 isolated RP
ClinGen gene–disease validity · snapshot 2026-10-03 · matched to entries by MONDO

An entry matches when ClinGen's MONDO disease is the entry's own disease term, a subtype term, or an exact-match mapping. An amber status marks an entry ClinGen supports the gene for (Definitive, Strong or Moderate) whose own record does not type it. A Limited, Disputed or Refuted tier on such an entry is not a gap.

ClinGen diseaseMOIClassificationdismech entry
BBS9-related ciliopathy MONDO:0700236 AR Definitive
2023-08-03
no dismech entry
Mechanism modules · computed from kb/

Identity from HGNC (snapshot 2026-10-01). Page layers are described in the gene pages documentation.