Normal function · from ai-gene-review (Q07837, commit 79fe13b38970) · AI-generated, not KB evidence

SLC3A1 encodes rBAT, a heavily glycosylated type II membrane protein that is expressed chiefly at the apical brush border of kidney proximal-tubule and intestinal epithelial cells. rBAT forms a disulfide-linked heterodimer with the SLC7A9 light chain and promotes assembly, maturation, oligomerization, and delivery of the heteromeric amino-acid transporter to the cell surface. The SLC7 light chain supplies the transmembrane transport pathway, whereas SLC3A1 is the heavy-chain accessory and trafficking subunit. The resulting complex supports renal and intestinal reabsorption of cystine and dibasic amino acids; loss-of-function SLC3A1 variants cause cystinuria, with poorly soluble urinary cystine producing recurrent stones. The extracellular alpha-amylase-like fold is structurally important but lacks demonstrated glucosidase activity.

At the apical brush border, SLC3A1/rBAT heterodimerizes with the catalytic SLC7A9 light chain and activates the transporter by supporting its maturation, oligomerization, and delivery to the plasma membrane. SLC3A1 therefore contributes to, but does not independently catalyze, cystine and dibasic-amino- acid transmembrane exchange used for renal amino-acid reabsorption.
In the knowledge base · computed from kb/ at build time

Disorders

Relationship is the entry's genetic[].relationship_type. untyped means the entry has a genetic record for the gene but does not type it; its free-text association is shown instead.

DisorderRelationshipWhere the gene appears
Cystinuria untyped
Causal loss-of-function variant
mechanism: Proximal Tubule Cystine Transport Defect
animal model: Mouse
Hypotonia-cystinuria syndrome untyped
Causal deletion
mechanism: Proximal tubular cystine transport defect; SLC3A1-PREPL contiguous gene deletion
ClinGen gene–disease validity · snapshot 2026-10-03 · matched to entries by MONDO

An entry matches when ClinGen's MONDO disease is the entry's own disease term, a subtype term, or an exact-match mapping. An amber status marks an entry ClinGen supports the gene for (Definitive, Strong or Moderate) whose own record does not type it. A Limited, Disputed or Refuted tier on such an entry is not a gap.

ClinGen diseaseMOIClassificationdismech entry
cystinuria MONDO:0009067 AR Definitive
2020-06-29
Cystinuria untyped

Identity from HGNC (snapshot 2026-10-01). Page layers are described in the gene pages documentation.