A developmental and epileptic encephalopathy caused by de novo variants in SNAP25, which encodes SNAP-25 (synaptosomal-associated protein 25), a core plasma-membrane (t-)SNARE that assembles with syntaxin-1 and synaptobrevin-2 to drive calcium-triggered synaptic vesicle fusion. Pathogenic missense and loss-of-function variants impair SNARE-complex function, reducing evoked neurotransmitter release. The core phenotype is intellectual disability and early-onset epilepsy (usually before age two), with recurrent movement disorders, cerebral visual impairment, and brain atrophy. It is one of the SNAREopathies and a synaptic vesicle cycle disorder, representing — with STXBP1, STX1B, and VAMP2 — the fusion-machinery arm of the cycle.
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Conditions with similar clinical presentations that must be differentiated from SNAP25-Related Developmental and Epileptic Encephalopathy:
name: SNAP25-Related Developmental and Epileptic Encephalopathy
creation_date: "2026-07-06T00:00:00Z"
description: >-
A developmental and epileptic encephalopathy caused by de novo variants in
SNAP25, which encodes SNAP-25 (synaptosomal-associated protein 25), a core
plasma-membrane (t-)SNARE that assembles with syntaxin-1 and synaptobrevin-2 to
drive calcium-triggered synaptic vesicle fusion. Pathogenic missense and
loss-of-function variants impair SNARE-complex function, reducing evoked
neurotransmitter release. The core phenotype is intellectual disability and
early-onset epilepsy (usually before age two), with recurrent movement
disorders, cerebral visual impairment, and brain atrophy. It is one of the
SNAREopathies and a synaptic vesicle cycle disorder, representing — with STXBP1,
STX1B, and VAMP2 — the fusion-machinery arm of the cycle.
category: Mendelian
parents:
- Neurodevelopmental Disorder
- Epileptic Encephalopathy
synonyms:
- SNAP25-DEE
- developmental and epileptic encephalopathy 117
- DEE117
- congenital myasthenic syndrome 18 (formerly)
- CMS18 (formerly)
disease_term:
preferred_term: SNAP25-related developmental and epileptic encephalopathy
term:
id: MONDO:0014590
label: congenital myasthenic syndrome 18
notes: >-
The disease_term label reads "congenital myasthenic syndrome 18" only because
that is MONDO:0014590's current canonical label, which term validation requires
be reproduced verbatim. It is NOT a mis-binding: OMIM:616330 (to which
MONDO:0014590 is equivalent) has been retitled "developmental and epileptic
encephalopathy-117 (DEE117)", with "myasthenic syndrome, congenital, 18"
retained only as a former title, and its OMIM definition is now the DEE
description drawn from Klockner et al. 2021 (PMID:33299146) — the same cohort
this entry curates. OMIM models one MIM number as one phenotype concept, so
the myasthenic presentation is a variant-associated feature of this spectrum
rather than a separate disease. MONDO triage concluded the two titles denote
one concept, and a rename and re-parent of MONDO:0014590 has been proposed but
not yet made (monarch-initiative/mondo#10532, still open); update this label if
and when that lands. Do not "correct" the binding by moving it to
MONDO:0032678, which is the unrelated GLS/glutaminase entity.
Scope: because MONDO:0014590 denotes the whole OMIM:616330 concept, this entry
formally spans the myasthenic presentation as well, but deliberately curates
only the developmental and epileptic encephalopathy arm — the 23-patient
Klockner cohort, in which most individuals had no prominent neuromuscular
symptoms. The presynaptic myasthenic arm, described in the original SNAP25B
p.Ile67Asn index case, is under-curated here and is not represented in the
phenotypes below.
prevalence:
- population: Worldwide
measure_type: UNKNOWN
prevalence_class: ULTRA_RARE
notes: >-
Ultra-rare monogenic developmental and epileptic encephalopathy; precise population prevalence not established.
references:
- reference: PMID:33299146
title: "De novo variants in SNAP25 cause an early-onset developmental and epileptic encephalopathy."
- reference: PMID:32559416
title: "SNAREopathies: Diversity in Mechanisms and Symptoms."
inheritance:
- name: Autosomal Dominant (De Novo)
inheritance_term:
preferred_term: Autosomal dominant inheritance
term:
id: HP:0000006
label: Autosomal dominant inheritance
description: >-
The disorder arises from de novo heterozygous SNAP25 missense or
loss-of-function variants.
evidence:
- reference: PMID:33299146
reference_title: "De novo variants in SNAP25 cause an early-onset developmental and epileptic encephalopathy."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: >-
The cohort comprises 23 individuals with pathogenic or likely pathogenic de
novo variants in SNAP25.
explanation: >-
Establishes the de novo dominant genetic basis across a patient cohort.
pathophysiology:
- name: SNAP-25 SNARE Assembly Defect
conforms_to: "synaptic_vesicle_cycle#Synaptic Vesicle Cycle Protein Deficiency"
description: >-
De novo missense and loss-of-function variants in SNAP25 impair SNAP-25, a core
t-SNARE of the neuronal fusion machine. Structural modeling of disease variants
predicts defects in SNAP-25 itself or in its interaction with the other SNARE
components (syntaxin-1, synaptobrevin-2), degrading assembly of the SNARE
complex that executes vesicle fusion.
role: trigger
cell_types:
- preferred_term: neuron
term:
id: CL:0000540
label: neuron
biological_processes:
- preferred_term: synaptic vesicle cycle
term:
id: GO:0099504
label: synaptic vesicle cycle
modifier: ABNORMAL
locations:
- preferred_term: brain
term:
id: UBERON:0000955
label: brain
evidence:
- reference: PMID:33299146
reference_title: "De novo variants in SNAP25 cause an early-onset developmental and epileptic encephalopathy."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: >-
Structural modeling for all variants predicted possible functional defects
concerning SNAP25 or impaired interaction with other components of the SNARE
complex.
explanation: >-
Establishes that disease variants disrupt SNAP-25 or its SNARE-complex
interactions, the molecular lesion of this node.
downstream:
- target: Impaired SNARE-Mediated Vesicle Fusion
causal_link_type: DIRECT
- name: Impaired SNARE-Mediated Vesicle Fusion
conforms_to: "synaptic_vesicle_cycle#Impaired Calcium-Triggered SNARE-Mediated Vesicle Fusion"
description: >-
SNAP-25 is one of the three core SNAREs whose zippering, triggered by the
calcium sensor synaptotagmin-1, fuses the synaptic vesicle with the presynaptic
membrane. Impaired SNAP-25 function degrades SNARE-complex assembly and reduces
calcium-triggered neurotransmitter release. This is the module's key conformance
target — the fusion-machinery arm.
role: central_effector
cell_types:
- preferred_term: neuron
term:
id: CL:0000540
label: neuron
biological_processes:
- preferred_term: calcium-dependent activation of synaptic vesicle fusion
term:
id: GO:0099502
label: calcium-dependent activation of synaptic vesicle fusion
modifier: DECREASED
- preferred_term: synaptic vesicle exocytosis
term:
id: GO:0016079
label: synaptic vesicle exocytosis
modifier: DECREASED
evidence:
- reference: PMID:32559416
reference_title: "SNAREopathies: Diversity in Mechanisms and Symptoms."
supports: SUPPORT
evidence_source: OTHER
snippet: >-
Neuronal SNAREs and their key regulators together drive synaptic vesicle
exocytosis and synaptic transmission as a single integrated membrane fusion
machine.
explanation: >-
Establishes SNAP-25 (a core SNARE) as part of the integrated fusion machine
impaired in this disorder.
- reference: PMID:33299146
reference_title: "De novo variants in SNAP25 cause an early-onset developmental and epileptic encephalopathy."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: >-
Structural modeling for all variants predicted possible functional defects
concerning SNAP25 or impaired interaction with other components of the SNARE
complex.
explanation: >-
Links the disease variants specifically to impaired SNARE-complex function,
the fusion step.
downstream:
- target: Cortical Excitation-Inhibition Imbalance and Seizures
causal_link_type: DIRECT
- name: Cortical Excitation-Inhibition Imbalance and Seizures
conforms_to: "epilepsy_excitation_inhibition_imbalance#Neuronal Hyperexcitability and Hypersynchrony"
description: >-
Reduced and imbalanced neurotransmitter release disturbs cortical
excitatory/inhibitory balance, producing neuronal hyperexcitability and an
early-onset epilepsy, together with impaired activity-dependent neurodevelopment
manifesting as intellectual disability.
role: effector
cell_types:
- preferred_term: neuron
term:
id: CL:0000540
label: neuron
biological_processes:
- preferred_term: chemical synaptic transmission
term:
id: GO:0007268
label: chemical synaptic transmission
modifier: ABNORMAL
locations:
- preferred_term: neocortex
term:
id: UBERON:0001950
label: neocortex
evidence:
- reference: PMID:33299146
reference_title: "De novo variants in SNAP25 cause an early-onset developmental and epileptic encephalopathy."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: >-
Intellectual disability and early-onset epilepsy were identified as the core
symptoms of SNAP25-DEE, with recurrent findings of movement disorders,
cerebral visual impairment, and brain atrophy.
explanation: >-
Documents early-onset epilepsy and intellectual disability as the core
clinical outcomes.
downstream:
- target: Epilepsy
causal_link_type: DIRECT
- target: Intellectual Disability
causal_link_type: INDIRECT_KNOWN_INTERMEDIATES
intermediate_mechanisms:
- Impaired activity-dependent synaptic transmission during development.
phenotypes:
- name: Epilepsy
category: Clinical
description: >-
Early-onset epilepsy, a core symptom, most often beginning before age two.
diagnostic: true
phenotype_term:
preferred_term: Epileptic encephalopathy
term:
id: HP:0200134
label: Epileptic encephalopathy
evidence:
- reference: PMID:33299146
reference_title: "De novo variants in SNAP25 cause an early-onset developmental and epileptic encephalopathy."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: >-
We provide a comprehensive description of SNAP25-DEE with intellectual
disability and early-onset epilepsy mostly occurring before the age of two
years.
explanation: >-
Documents early-onset epilepsy as a core symptom with onset before age two.
- name: Intellectual Disability
category: Clinical
description: >-
Intellectual disability is a core symptom of SNAP25-DEE.
diagnostic: true
phenotype_term:
preferred_term: Intellectual disability
term:
id: HP:0001249
label: Intellectual disability
evidence:
- reference: PMID:33299146
reference_title: "De novo variants in SNAP25 cause an early-onset developmental and epileptic encephalopathy."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: >-
Intellectual disability and early-onset epilepsy were identified as the core
symptoms of SNAP25-DEE
explanation: >-
Documents intellectual disability as a core symptom.
- name: Movement Disorder
category: Clinical
description: >-
Movement disorders are a recurrent feature.
phenotype_term:
preferred_term: Abnormality of movement
term:
id: HP:0100022
label: Abnormality of movement
evidence:
- reference: PMID:33299146
reference_title: "De novo variants in SNAP25 cause an early-onset developmental and epileptic encephalopathy."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: >-
with recurrent findings of movement disorders, cerebral visual impairment,
and brain atrophy.
explanation: >-
Documents movement disorders as a recurrent feature.
- name: Cerebral Visual Impairment
category: Clinical
description: >-
Cerebral (cortical) visual impairment is a recurrent feature.
phenotype_term:
preferred_term: Cerebral visual impairment
term:
id: HP:0100704
label: Cerebral visual impairment
evidence:
- reference: PMID:33299146
reference_title: "De novo variants in SNAP25 cause an early-onset developmental and epileptic encephalopathy."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: >-
with recurrent findings of movement disorders, cerebral visual impairment,
and brain atrophy.
explanation: >-
Documents cerebral visual impairment as a recurrent feature.
- name: Cerebral Atrophy
category: Clinical
description: >-
Brain atrophy is a recurrent neuroimaging finding.
phenotype_term:
preferred_term: Cerebral atrophy
term:
id: HP:0002059
label: Cerebral atrophy
evidence:
- reference: PMID:33299146
reference_title: "De novo variants in SNAP25 cause an early-onset developmental and epileptic encephalopathy."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: >-
with recurrent findings of movement disorders, cerebral visual impairment,
and brain atrophy.
explanation: >-
Documents brain atrophy as a recurrent finding.
genetic:
- name: SNAP25
gene_term:
preferred_term: SNAP25
term:
id: hgnc:11132
label: SNAP25
association: Loss-of-Function and Missense Mutations
presence: Positive
variant_origin: GERMLINE
inheritance:
- name: Autosomal Dominant (De Novo)
inheritance_term:
preferred_term: Autosomal dominant inheritance
term:
id: HP:0000006
label: Autosomal dominant inheritance
notes: >-
De novo heterozygous missense and loss-of-function variants in SNAP25 impair
SNAP-25 function or its interaction with the other SNARE-complex components.
evidence:
- reference: PMID:33299146
reference_title: "De novo variants in SNAP25 cause an early-onset developmental and epileptic encephalopathy."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: >-
Individuals harboring heterozygous missense or loss-of-function variants in
SNAP25 were assembled through collaboration with international colleagues,
matchmaking platforms, and literature review.
explanation: >-
Defines the heterozygous missense and loss-of-function variant spectrum.
diagnosis:
- name: SNAP25 Molecular Diagnosis
description: >-
Diagnosis is established by identifying a de novo heterozygous pathogenic
SNAP25 variant in a child with early-onset epilepsy and intellectual disability.
diagnosis_term:
preferred_term: molecular genetic testing
term:
id: NCIT:C19770
label: Molecular Analysis
qualifiers:
- predicate:
preferred_term: has participant
term:
id: RO:0000057
label: has participant
value:
preferred_term: SNAP25
term:
id: hgnc:11132
label: SNAP25
results: A de novo pathogenic SNAP25 variant establishes the diagnosis.
evidence:
- reference: PMID:33299146
reference_title: "De novo variants in SNAP25 cause an early-onset developmental and epileptic encephalopathy."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: >-
The cohort comprises 23 individuals with pathogenic or likely pathogenic de
novo variants in SNAP25.
explanation: >-
Molecular identification of de novo SNAP25 variants establishes the diagnosis.
differential_diagnoses:
- name: Other SNAREopathies and synaptic vesicle cycle disorders
description: >-
Other SNARE-machinery and synaptic vesicle cycle disorders (STXBP1, STX1B,
VAMP2, UNC13A) share early-onset epilepsy and developmental impairment and are
distinguished by molecular testing.
distinguishing_features:
- A de novo SNAP25 variant favors this disorder.
- A variant in another SNARE/vesicle-cycle gene favors the corresponding SNAREopathy.
evidence:
- reference: PMID:33299146
reference_title: "De novo variants in SNAP25 cause an early-onset developmental and epileptic encephalopathy."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: >-
These core symptoms and additional recurrent phenotypes show an overlap to
genes encoding other components or associated proteins of the SNARE complex
such as STX1B, STXBP1, or VAMP2.
explanation: >-
Establishes the overlapping SNAREopathy differential diagnosis.
progression:
- phase: Infancy to Early Childhood
notes: >-
Onset is typically before age two with early-onset epilepsy and evolving
intellectual disability; movement disorders, cerebral visual impairment, and
brain atrophy are recurrent.
evidence:
- reference: PMID:33299146
reference_title: "De novo variants in SNAP25 cause an early-onset developmental and epileptic encephalopathy."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: >-
intellectual disability and early-onset epilepsy mostly occurring before the
age of two years.
explanation: >-
Documents onset before age two.
treatments:
- name: Antiseizure Medication
description: >-
Seizures are managed with antiseizure medications; response is variable. No
agent corrects the underlying SNARE-assembly defect.
therapeutic_modality: SMALL_MOLECULE
treatment_term:
preferred_term: Pharmacotherapy
term:
id: NCIT:C15986
label: Pharmacotherapy
therapeutic_agent:
- preferred_term: levetiracetam
term:
id: CHEBI:6437
label: levetiracetam
- name: Supportive and Developmental Care
description: >-
Multidisciplinary supportive care, including developmental therapies and
vision support for cerebral visual impairment, is the mainstay.
treatment_term:
preferred_term: Supportive Care
term:
id: NCIT:C15747
label: Supportive Care
- name: Genetic Counseling
description: >-
Genetic counseling addresses the de novo dominant mechanism and generally low
recurrence risk.
treatment_term:
preferred_term: genetic counseling
term:
id: NCIT:C15240
label: Genetic Counseling
discussions:
- discussion_id: gap_snap25_direction_of_effect
prompt: >-
For a given pathogenic SNAP25 variant, what determines whether it acts by
simple loss of function (haploinsufficiency, reduced evoked release) versus a
dominant-negative or gain-of-function mechanism (altered SNARE zippering or
increased complex-binding affinity), and does the direction of effect predict
the clinical subphenotype (DEE versus milder intellectual disability versus
ataxic or myasthenic features)?
kind: KNOWLEDGE_GAP
status: OPEN
attaches_to:
- pathophysiology#SNAP-25 SNARE Assembly Defect
- pathophysiology#Impaired SNARE-Mediated Vesicle Fusion
rationale: >-
SNAP25-DEE is caused by a mix of missense and loss-of-function de novo
variants, but structural modeling in the defining cohort could only predict
"possible functional defects" without resolving whether release is reduced by
haploinsufficiency or by a dominant-negative variant that is incorporated into
the SNARE complex and poisons it. The blind-drunk mouse shows that a SNAP-25
missense change can act paradoxically by *increasing* SNARE-complex binding
affinity rather than abolishing it, so direction of effect cannot be assumed
from the variant class alone. This matters therapeutically: allele-silencing
or protein-replacement strategies help only true loss of function, whereas a
dominant-negative allele may need selective knockdown of the mutant transcript.
evidence:
- reference: PMID:33299146
reference_title: "De novo variants in SNAP25 cause an early-onset developmental and epileptic encephalopathy."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: >-
Structural modeling for all variants predicted possible functional defects
concerning SNAP25 or impaired interaction with other components of the SNARE
complex.
explanation: >-
Shows that the human cohort establishes disruption of SNAP-25 or its SNARE
interactions but does not resolve the direction of effect (loss versus
dominant-negative) for individual variants.
- reference: PMID:17283335
reference_title: "A dominant mutation in Snap25 causes impaired vesicle trafficking, sensorimotor gating, and ataxia in the blind-drunk mouse."
supports: SUPPORT
evidence_source: MODEL_ORGANISM
snippet: >-
The causative I67T missense mutation results in increased binding affinities
within the SNARE complex, impaired exocytotic vesicle recycling and granule
exocytosis in pancreatic beta-cells, and a reduction in the amplitude of
evoked cortical excitatory postsynaptic potentials.
explanation: >-
Demonstrates that a SNAP-25 missense variant can act by increasing, not
abolishing, SNARE-complex binding affinity, showing the direction of effect
is not predictable from variant class and motivating the gap.
- reference: PMID:32559416
reference_title: "SNAREopathies: Diversity in Mechanisms and Symptoms."
supports: SUPPORT
evidence_source: OTHER
snippet: >-
We argue that disease severity generally scales with functional redundancy
explanation: >-
Frames the SNAREopathy expectation that mechanism and severity vary with
redundancy, supporting the need to resolve per-variant direction of effect.
proposed_experiments:
- experiment_id: exp_snap25_variant_direction_release_panel
name: SNAP25 variant direction-of-effect release panel
description: >-
Express representative SNAP25 DEE variants (missense and loss-of-function) in
Snap25-null neurons alone and co-expressed with wild-type SNAP-25 in an
isogenic background, then measure evoked release and SNARE-complex assembly
to classify each variant as loss-of-function versus dominant-negative.
experiment_type:
preferred_term: variant functional-classification and rescue experiment
perturbations:
- name: SNAP25 variant expression on null background
target: pathophysiology#SNAP-25 SNARE Assembly Defect
genes:
- preferred_term: SNAP25
term:
id: hgnc:11132
label: SNAP25
description: >-
Introduce each DEE variant into Snap25-null neurons, with and without
co-expressed wild-type SNAP-25, to test for haploinsufficiency versus
dominant interference.
readouts:
- name: Evoked release and SNARE assembly
target: pathophysiology#Impaired SNARE-Mediated Vesicle Fusion
biological_processes:
- preferred_term: calcium-dependent activation of synaptic vesicle fusion
term:
id: GO:0099502
label: calcium-dependent activation of synaptic vesicle fusion
modifier: DECREASED
- preferred_term: synaptic vesicle exocytosis
term:
id: GO:0016079
label: synaptic vesicle exocytosis
modifier: DECREASED
assays:
- preferred_term: patch-clamp electrophysiology assay
- preferred_term: co-immunoprecipitation assay
direction: NEGATIVE
controls:
- name: Wild-type SNAP-25 rescue
description: Snap25-null neurons rescued with wild-type human SNAP-25.
- name: Null baseline
description: Snap25-null neurons without rescue as the loss-of-function floor.
decision_criterion: >-
A variant is loss-of-function if it fails to restore evoked release on the
null background and does not depress wild-type-mediated release when
co-expressed; it is dominant-negative if co-expression with wild-type
SNAP-25 reduces release below the wild-type-only level.
would_support:
- pathophysiology#SNAP-25 SNARE Assembly Defect
- pathophysiology#Impaired SNARE-Mediated Vesicle Fusion
- discussion_id: gap_snap25_channel_modulation_vs_release_failure
prompt: >-
How much of the cortical hyperexcitability and seizure phenotype in
SNAP25-DEE arises from impaired calcium-triggered vesicle fusion (release
failure) versus SNAP-25's separable, non-fusion modulation of presynaptic
voltage-gated calcium and potassium channels (a channelopathy-like change in
intrinsic excitability)?
kind: OPEN_QUESTION
status: OPEN
attaches_to:
- pathophysiology#Impaired SNARE-Mediated Vesicle Fusion
- pathophysiology#Cortical Excitation-Inhibition Imbalance and Seizures
rationale: >-
The curated causal chain routes the phenotype through reduced SNARE-mediated
release, but SNAP-25 has well-described roles beyond exocytosis, including
negative modulation of voltage-gated calcium channels and interactions that
tune neuronal excitability. Because DEE variants sit in the same protein that
performs both jobs, the seizure phenotype could reflect a release deficit, a
channelopathy-like intrinsic-excitability shift, or both — and the balance may
differ by variant and neuron type. Distinguishing these arms is needed before
excitability-targeted therapy is rationalized, and it is not resolved by the
current release-centric evidence.
evidence:
- reference: PMID:17283335
reference_title: "A dominant mutation in Snap25 causes impaired vesicle trafficking, sensorimotor gating, and ataxia in the blind-drunk mouse."
supports: SUPPORT
evidence_source: MODEL_ORGANISM
snippet: >-
The causative I67T missense mutation results in increased binding affinities
within the SNARE complex, impaired exocytotic vesicle recycling and granule
exocytosis in pancreatic beta-cells, and a reduction in the amplitude of
evoked cortical excitatory postsynaptic potentials.
explanation: >-
Documents that a SNAP-25 variant reduces evoked cortical release (the fusion
arm) but does not measure the channel-modulation contribution to
excitability, leaving the relative weighting open.
- reference: PMID:32559416
reference_title: "SNAREopathies: Diversity in Mechanisms and Symptoms."
supports: SUPPORT
evidence_source: OTHER
snippet: >-
subtle differences in components being rate limiting in different types of
neurons helps to explain the main symptoms.
explanation: >-
Supports the expectation that SNARE-component effects are neuron-type
dependent, consistent with a mixed release-plus-excitability contribution
that must be disentangled.
proposed_experiments:
- experiment_id: exp_snap25_release_vs_intrinsic_excitability
name: SNAP25 release versus intrinsic-excitability dissection
description: >-
In neurons expressing SNAP25 DEE variants, separately quantify evoked
synaptic release and cell-autonomous intrinsic excitability (voltage-gated
calcium and potassium current density, action-potential threshold and
firing) to apportion the excitability change between fusion failure and
channel modulation.
experiment_type:
preferred_term: electrophysiological mechanism-dissection experiment
perturbations:
- name: SNAP25 DEE variant expression
target: pathophysiology#Impaired SNARE-Mediated Vesicle Fusion
genes:
- preferred_term: SNAP25
term:
id: hgnc:11132
label: SNAP25
description: >-
Express DEE variants in neurons and compare against wild-type SNAP-25 and
null controls.
readouts:
- name: Evoked synaptic transmission
target: pathophysiology#Impaired SNARE-Mediated Vesicle Fusion
biological_processes:
- preferred_term: chemical synaptic transmission
term:
id: GO:0007268
label: chemical synaptic transmission
modifier: DECREASED
assays:
- preferred_term: patch-clamp electrophysiology assay
direction: NEGATIVE
- name: Intrinsic excitability and channel currents
target: pathophysiology#Cortical Excitation-Inhibition Imbalance and Seizures
assays:
- preferred_term: voltage-clamp current-density assay
- preferred_term: current-clamp firing assay
direction: POSITIVE
controls:
- name: Wild-type SNAP-25
description: Neurons expressing wild-type SNAP-25.
- name: Snap25-null
description: Null neurons isolating the loss-of-function reference.
decision_criterion: >-
The channel-modulation arm is supported if DEE variants shift intrinsic
excitability (altered calcium or potassium current density, firing, or
threshold) beyond what is accounted for by the measured reduction in evoked
release; otherwise the phenotype is release-dominated.
would_support:
- pathophysiology#Impaired SNARE-Mediated Vesicle Fusion
- pathophysiology#Cortical Excitation-Inhibition Imbalance and Seizures
- discussion_id: gap_snap25_mouse_model_human_dee_fidelity
prompt: >-
Do existing Snap25 point-mutant mouse models, which reproduce ataxia,
sensorimotor-gating deficits, and reduced cortical release, faithfully model
the human SNAP25-DEE trajectory of before-age-two epileptic encephalopathy
with intellectual disability, or do they capture only a partial, non-epileptic
slice of the human phenotype?
kind: HUMAN_MODEL_MISMATCH
status: OPEN
attaches_to:
- pathophysiology#Impaired SNARE-Mediated Vesicle Fusion
- pathophysiology#Cortical Excitation-Inhibition Imbalance and Seizures
rationale: >-
The strongest mechanistic in vivo evidence for SNAP-25 dysfunction comes from
the blind-drunk I67T mouse, whose overt phenotype is ataxia and impaired
sensorimotor gating with reduced evoked cortical release — features linked to
psychiatric rather than epileptic disease. Human SNAP25-DEE, by contrast, is
defined by early-onset epilepsy and intellectual disability with onset mostly
before age two. Whether the mouse recapitulates the human epileptic
encephalopathy trajectory, or only the synaptic and motor substrate, is the
open translational question; this determines whether the model is a valid
platform for testing DEE-directed therapies.
evidence:
- reference: PMID:17283335
reference_title: "A dominant mutation in Snap25 causes impaired vesicle trafficking, sensorimotor gating, and ataxia in the blind-drunk mouse."
supports: SUPPORT
evidence_source: MODEL_ORGANISM
snippet: >-
The mice also display ataxia and impaired sensorimotor gating, a phenotype
which has been associated with psychiatric disorders in humans.
explanation: >-
Establishes the model-organism phenotype (ataxia, sensorimotor gating)
whose correspondence to the human DEE trajectory is uncertain.
- reference: PMID:33299146
reference_title: "De novo variants in SNAP25 cause an early-onset developmental and epileptic encephalopathy."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: >-
intellectual disability and early-onset epilepsy mostly occurring before the
age of two years.
explanation: >-
States the human clinical trajectory against which the mouse model's
fidelity must be judged.
proposed_experiments:
- experiment_id: exp_snap25_ki_epileptogenesis_phenotyping
name: SNAP25 patient-variant knock-in epileptogenesis phenotyping
description: >-
Generate knock-in mice carrying recurrent human SNAP25 DEE variants and
phenotype for spontaneous seizures and epileptiform EEG, developmental
cognitive assays, and cortical excitatory/inhibitory balance, comparing the
trajectory and age of onset against the human before-age-two course.
experiment_type:
preferred_term: patient-variant knock-in mouse phenotyping experiment
perturbations:
- name: Human DEE variant knock-in
target: pathophysiology#SNAP-25 SNARE Assembly Defect
genes:
- preferred_term: SNAP25
term:
id: hgnc:11132
label: SNAP25
description: >-
Introduce a recurrent human SNAP25 DEE variant at the mouse locus.
readouts:
- name: Seizures and cortical excitability
target: pathophysiology#Cortical Excitation-Inhibition Imbalance and Seizures
biological_processes:
- preferred_term: chemical synaptic transmission
term:
id: GO:0007268
label: chemical synaptic transmission
modifier: ABNORMAL
assays:
- preferred_term: video-EEG seizure monitoring
direction: POSITIVE
controls:
- name: Wild-type littermates
description: Littermate controls without the knock-in variant.
decision_criterion: >-
The model faithfully represents SNAP25-DEE if knock-in mice develop
early spontaneous seizures with epileptiform EEG and developmental cognitive
deficits on a timeline analogous to the human before-age-two onset; absence
of an epileptic phenotype indicates a human-model mismatch limited to the
synaptic/motor substrate.
would_support:
- pathophysiology#Impaired SNARE-Mediated Vesicle Fusion
- pathophysiology#Cortical Excitation-Inhibition Imbalance and Seizures