RECON Progeroid Syndrome

Mendelian MONDO:0957266 Pathograph 10 Show in embeddings browser Genetic Disease

RECON (RECql ONe) syndrome is an autosomal recessive genome instability disorder with a progeroid facial gestalt, caused by biallelic variants in RECQL (RECQL1), the RecQ-family 3'-5' DNA helicase that had no associated human disease before 2022. The entire published cohort is three girls from two Middle Eastern families (one consanguineous), all homozygous for the same zinc-binding-domain missense variant, p.Ala459Ser, and all evaluated in childhood (4 to 14 years). Growth deficiency is postnatal: birth weights at term were normal, while height and especially weight fell below the mean, most severely in the one child followed into adolescence. Cutaneous photosensitivity, xeroderma, a progeroid face with a tiny pinched (hypoplastic) nose and prominent premaxilla, and slender elongated thumbs were present in all three; reduced subcutaneous fat, dry eyes, red eyes and hirsutism were seen in some. Developmental milestones were age appropriate in all three. The variant is hypomorphic: the mutant protein is expressed and localizes normally but has reduced ATPase, helicase and reversed-fork restoration activity with preserved strand annealing, and patient cells show spontaneous replication fork stalling, defective fork restart, impaired repair of topoisomerase-poison-induced breaks and increased chromosome breakage. How this cellular defect produces the clinical features is not established. No cancers have been reported in affected individuals or their heterozygous relatives, but the cohort is too small and young to assess cancer risk or adult natural history, and no disease-specific management or surveillance has been published.

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1
Mappings
1
Inheritance
6
Pathophys.
32
Phenotypes
4
Gaps
10
Pathograph
1
Genes
5
Differentials
1
Models
1
Deep Research
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Classifications

Harrison's Part
GENETICS ENVIRONMENT DISEASE
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Mappings

MONDO
MONDO:0957266 RECON progeroid syndrome
skos:exactMatch MONDO
Primary MONDO disease identifier for this entry.
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Inheritance

1
Autosomal recessive inheritance HP:0000007
All three affected individuals were homozygous for RECQL p.Ala459Ser, while available parents and eight unaffected siblings were heterozygous or wild type. Family A parents were double first cousins; family B reported no known consanguinity. No recurrence-risk figure has been published for this disease specifically.
Autosomal recessive inheritance
Show evidence (2 references)
PMID:35025765 SUPPORT Human Clinical
"All 3 affected individuals (III-2 and III-4 from family A and III-4 from family B) were homozygous for this variant, whereas the available parents and 8 healthy siblings were either heterozygous or WT"
Segregation of the homozygous genotype with disease, with unaffected heterozygous relatives, supports recessive inheritance.
PMID:35025765 SUPPORT Human Clinical
"She was the second of 5 children born to parents of Middle Eastern descent, who were double first cousins"
Parental consanguinity in family A.
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Discussions and Knowledge Gaps

4
How does reduced RECQL1 fork-restart and repair activity produce the growth deficiency, progeroid face, xeroderma and photosensitivity of RECON syndrome, and why is the developmental phenotype so limited?
KNOWLEDGE GAP OPEN recon_cellular_to_clinical_gap
The cellular defect is well characterized in patient cells, but no study links it to any clinical feature, so the entry draws no causal edges from the cellular nodes to the clinical phenotypes. The authors call the progeroid classification speculative.
Show evidence (2 references)
PMID:35025765 SUPPORT Human Clinical
"if RECON syndrome represents a disease of failed replication restart, it is not clear why the clinical symptoms exhibited by the affected patients do not have more of a developmental component"
The discovering authors state the unresolved link.
PMID:35025765 SUPPORT Human Clinical
"it is likely that the affected patients are currently too young to ascertain whether they have any other clinical signs of premature aging, it is tempting to speculate that this represents another progeroid syndrome"
The progeroid framing is explicitly provisional.
What are the adult course, cancer risk, lifespan and surveillance needs in RECON syndrome, and do other RECQL alleles cause a broader phenotype?
KNOWLEDGE GAP OPEN recon_natural_history_gap
Three children with one shared allele are the whole cohort, the oldest last examined at 14 years 9 months; no surveillance or management recommendations exist.
Show evidence (2 references)
PMID:36805074 SUPPORT REVIEW SYNTHESIS Human Clinical
"all the patients are relatively young, such that many age-related deficits may not have had sufficient time to appear"
The discovering group states the natural history is incomplete.
PMID:35025765 SUPPORT Human Clinical
"the range and severity of the clinical symptoms linked with RECQL1 dysfunction will only be properly determined following the identification of additional patients"
The phenotype spectrum awaits further patients.
Why does Recql loss cause chromosome instability in mouse embryonic fibroblasts but no organismal phenotype, while a hypomorphic human allele causes a growth and progeroid syndrome?
HUMAN MODEL MISMATCH OPEN recql_null_mouse_mismatch
The cellular phenotype is conserved while the organismal one is not. Proposed explanations in the model paper are genetic background and redundancy; a hypomorphic allele could also behave differently from a null.
Show evidence (1 reference)
PMID:17158923 SUPPORT Model Organism
"Genetic background, functional redundancy, and perhaps other factors may protect the unstressed mouse from the types of abnormalities that might be expected from the severe chromosomal aberrations detected at the cellular level."
The model authors state the mismatch and candidate explanations.
Do heterozygous RECQL loss-of-function variants increase breast cancer risk? This is a separate gene-disease claim from RECON syndrome, not a feature of it.
CONTROVERSY OPEN recql_heterozygous_breast_cancer_claim
Attached to
Two 2015 studies reported an association, later studies disputed it, and ClinGen classifies RECQL with hereditary breast carcinoma as Disputed. No cancer has been reported in RECON syndrome patients or their heterozygous relatives, but that small observation neither supports nor excludes a carrier risk.
Show evidence (3 references)
PMID:25915596 SUPPORT Human Clinical
"We conclude that RECQL is a breast cancer susceptibility gene."
Original case-control report of the heterozygous association.
PMID:35025765 REFUTE BACKGROUND Human Clinical
"although this association has been disputed by several other groups"
The RECON authors note subsequent studies disputing the association.
PMID:35025765 NO_EVIDENCE Human Clinical
"none of the heterozygous carriers of the p.A459S mutation in either family A or B has reported developing breast cancer"
Too few carriers to bear on the claim; recorded so the observation is not mistaken for evidence either way.
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Pathophysiology

6
RECQL1 Zinc-Binding Domain Hypomorphic Missense Variant
Homozygous germline RECQL c.1375G>T p.(Ala459Ser) substitutes a conserved alanine in the RECQL1 zinc-binding domain. Mutant protein is expressed at normal levels in patient lymphoblastoid cells, localizes to the nucleus and still associates with PARP1, so the defect is catalytic rather than a loss of protein.
RECQL hgnc:9948 HUGO Gene Nomenclature Committee (hgnc) Relation: this pathophysiological event involves this gene This pathophysiological event involves RECQL (hgnc:9948). hgnc:9948 is a gene from the HUGO Gene Nomenclature Committee.
Genetic context RECQL hgnc:9948 HUGO Gene Nomenclature Committee (hgnc) Relation: this genetic context concerns this gene This genetic context concerns RECQL (hgnc:9948). hgnc:9948 is a gene from the HUGO Gene Nomenclature Committee. Variant type: single nucleotide variant variant_origin: GERMLINE zygosity: HOMOZYGOUS functional_impact_category: PARTIAL_LOSS_OF_FUNCTION
Show evidence (2 references)
PMID:35025765 SUPPORT Human Clinical
"were homozygous for the same missense mutation in RECQL1 (p.Ala459Ser), located within its zinc binding domain"
Identifies the causal variant and its domain location.
PMID:35025765 SUPPORT In Vitro
"We observed no obvious differences in the expression of RECQL1 protein in LCLs from the 2 affected patients when compared with the expression of RECQL1 in LCLs from 2 normal individuals"
Mutant protein is stably expressed in patient cells.
Reduced RECQL1 ATPase and Helicase Activity
Recombinant RECQL1-A459S has reduced ATP turnover, reduced unwinding of forked duplexes and reduced restoration of reversed replication forks, with modestly reduced DNA binding. Single-strand annealing and oligomerization are preserved, so the variant selectively impairs the ATP-driven motor function.
RECQL hgnc:9948 HUGO Gene Nomenclature Committee (hgnc) Relation: this pathophysiological event involves this gene This pathophysiological event involves RECQL (hgnc:9948). hgnc:9948 is a gene from the HUGO Gene Nomenclature Committee.
DNA helicase activity GO:0003678 Gene Ontology (GO) Relation: this pathophysiological event involves this molecular function This pathophysiological event involves decreased DNA helicase activity (GO:0003678). GO:0003678 is a molecular function from the Gene Ontology. ↓ DECREASED ATP hydrolysis activity GO:0016887 Gene Ontology (GO) Relation: this pathophysiological event involves this molecular function This pathophysiological event involves decreased ATP hydrolysis activity (GO:0016887). GO:0016887 is a molecular function from the Gene Ontology. ↓ DECREASED
Show evidence (3 references)
PMID:35025765 SUPPORT In Vitro
"At a protein concentration of 2.5 nM, WT RECQL1 unwound nearly 60% of the DNA substrate compared with approximately 20% for mutant RECQL1"
Quantifies the helicase deficit of the mutant protein.
PMID:35025765 SUPPORT In Vitro
"WT RECQL1 had a nearly 3-fold higher kcat for ATP hydrolysis in the presence of the M13mp18 ssDNA effector compared with RECQL1-A459S"
Quantifies the ATPase deficit of the mutant protein.
PMID:35025765 SUPPORT In Vitro
"the strand annealing activity of WT and mutant RECQL1 proteins was nearly identical over a range of protein concentrations"
Strand annealing is preserved, so the loss of function is partial and selective.
Stalled Replication Fork Degradation
Patient fibroblasts expressing empty vector or RECQL1-A459S show a mild increase in nascent-strand degradation after prolonged hydroxyurea exposure, corrected by wild-type RECQL1. The authors attribute the fork-restart defect partly to this degradation.
Show evidence (1 reference)
PMID:35025765 SUPPORT In Vitro
"RECQL-P1-1 fibroblasts complemented with empty vector and the p.A459S exhibited a mild increase in replication fork degradation after prolonged exposure to HU that could be complemented following the expression of WT RECQL1"
Fiber-assay evidence of increased fork degradation, rescued by wild-type protein.
Defective Replication Fork Restart
Patient lymphoblastoid cells show more spontaneously stalled forks (endogenous replication stress), and patient cells fail to restart forks stalled by topoisomerase I or II poisons, hydroxyurea or MMS. Fork speed and origin firing are grossly normal before treatment. The defects are corrected by wild-type but not A459S RECQL1.
RECQL hgnc:9948 HUGO Gene Nomenclature Committee (hgnc) Relation: this pathophysiological event involves this gene This pathophysiological event involves RECQL (hgnc:9948). hgnc:9948 is a gene from the HUGO Gene Nomenclature Committee.
replication fork restart GO:0031297 Gene Ontology (GO) Relation: this pathophysiological event involves this biological process This pathophysiological event involves decreased replication fork restart, annotated with replication fork processing (GO:0031297). GO:0031297 is a biological process from the Gene Ontology. ↓ DECREASED
Show evidence (3 references)
PMID:35025765 SUPPORT In Vitro
"even in the absence of exposure to genotoxins, both RECQL1 LCLs had an increase in spontaneously stalled forks indicative of higher levels of endogenous replication stress"
Spontaneous replication stress in patient cells.
PMID:35025765 SUPPORT In Vitro
"these data suggest that the clinically relevant p.A459S mutation in the RECQL1 ZBD, which perturbs its catalytic activity, compromises the ability of RECQL1 to restart reversed replication forks."
Fiber analysis in patient LCLs and complemented fibroblasts shows the restart defect.
PMID:35025765 SUPPORT In Vitro
"the p.A459S mutation significantly compromised the ability of replication forks transiently stalled by HU to restart efficiently"
The restart defect extends beyond topoisomerase lesions to nucleotide-depletion stalling.
Impaired Repair of Topoisomerase-Associated DNA Breaks
Patient fibroblasts lacking functional RECQL1 retain more 53BP1 foci for 24 hours after camptothecin or etoposide and have more spontaneous foci. ATM-dependent damage signaling is robustly activated in patient cells, so the defect lies in repair or replication through the lesion rather than in damage sensing. Breakage and translocation at the MLL locus after etoposide, the signature of TDP2 deficiency, was not increased.
double-strand break repair GO:0006302 Gene Ontology (GO) Relation: this pathophysiological event involves this biological process This pathophysiological event involves decreased double-strand break repair (GO:0006302). GO:0006302 is a biological process from the Gene Ontology. ↓ DECREASED
Show evidence (2 references)
PMID:35025765 SUPPORT In Vitro
"patients’ cells expressing either the empty vector or the p.A459S-mutant RECQL1 had higher numbers of 53BP1 foci in cells throughout a 24-hour time course following exposure to CPT or ETOP than did cells expressing WT RECQL1"
Persistent 53BP1 foci indicate slower repair of topoisomerase-poison-induced breaks.
PMID:35025765 SUPPORT In Vitro
"both RECQL1-mutant cell lines showed robust activation of the ATM-dependent DDR"
Damage signaling is intact, localizing the defect downstream of sensing.
Chromosomal Instability
Patient lymphoblastoid cells and fibroblasts show increased spontaneous and camptothecin- or etoposide-induced chromosome breakage and radial exchanges, more micronuclei, and a mild increase in sister chromatid exchange; the breakage is corrected by wild-type RECQL1. Constitutional karyotype and diepoxybutane-induced breakage were normal in family B, so this is a cellular, not a karyotypic, finding. Its link to the clinical features has not been demonstrated.
Show evidence (2 references)
PMID:35025765 SUPPORT In Vitro
"the RECQL1-P1-1 and RECQL1-P2 LCLs had higher levels of spontaneous and CPT- or ETOP-induced chromosome breakage than did 2 normal LCLs"
Increased chromosome breakage in both patients' cell lines.
PMID:35025765 SUPPORT In Vitro
"both the increased spontaneous and CPT- or ETOP-induced chromosome breakages were also observed in fibroblasts from patient RECQL1-P1 and could be complemented by the expression of exogenous WT but not mutant A459S RECQL1"
Complementation ties the breakage phenotype to RECQL1 dysfunction.
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Pathograph

Use the checkboxes to hide or show graph categories. Hover nodes for evidence and cross-linked metadata.
Pathograph: causal mechanism network for RECON Progeroid Syndrome Interactive directed graph showing how pathophysiology mechanisms, phenotypes, genetic factors and variants, experimental models, environmental triggers, and treatments relate through causal and linked edges.
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Phenotypes

32
Blood 1
Thrombocytopenia HP:0001873 Human Phenotype Ontology (HP) Relation: this clinical feature is this phenotype This clinical feature is Thrombocytopenia (HP:0001873). HP:0001873 is a phenotype from the Human Phenotype Ontology.
Show evidence (1 reference)
PMID:35025765 SUPPORT Human Clinical
"Her other medical problems at that time were thrombocytopenia of undetermined cause and recurrent chest infections."
Family B proband; cause undetermined.
Cardiovascular 3
Dry Eyes Keratoconjunctivitis sicca HP:0001097 Human Phenotype Ontology (HP) Relation: this clinical feature is this phenotype This clinical feature is Xerophthalmia (dry eyes), annotated with Keratoconjunctivitis sicca (HP:0001097). HP:0001097 is a phenotype from the Human Phenotype Ontology.
Show evidence (1 reference)
PMID:35025765 SUPPORT Human Clinical
"her eyes remained open while sleeping, and she had xerophthalmia (dry eyes) and xeroderma (dry skin) with scaling"
Dry eyes in the family A proband by 18 months.
Red Eyes Conjunctival hyperemia HP:0030953 Human Phenotype Ontology (HP) Relation: this clinical feature is this phenotype This clinical feature is Red eyes, annotated with Conjunctival hyperemia (HP:0030953). HP:0030953 is a phenotype from the Human Phenotype Ontology.
Show evidence (2 references)
PMID:35025765 SUPPORT Human Clinical
"somewhat aged (progeroid) appearance with little subcutaneous fat, red eyes"
Red eyes in the younger family A sister.
PMID:35025765 SUPPORT Human Clinical
"The proband’s dysmorphic features included a round face, redness of eyes"
Red eyes in the family A proband.
Livedo Reticularis HP:0033505 Human Phenotype Ontology (HP) Relation: this clinical feature is this phenotype This clinical feature is Livedo reticularis (HP:0033505). HP:0033505 is a phenotype from the Human Phenotype Ontology.
Show evidence (1 reference)
PMID:35025765 SUPPORT Human Clinical
"The proband also had livedo reticularis and keratosis pilaris"
Skin finding in the family A proband.
Ear 1
Small Attached Earlobes Small earlobe HP:0000385 Human Phenotype Ontology (HP) Relation: this clinical feature is this phenotype This clinical feature is Small, attached earlobes, annotated with Small earlobe (HP:0000385). HP:0000385 is a phenotype from the Human Phenotype Ontology.
Show evidence (1 reference)
PMID:35025765 SUPPORT Human Clinical
"small ears with small, attached earlobes"
Ear finding in the family B proband.
Eye 1
Deeply Set Eyes HP:0000490 Human Phenotype Ontology (HP) Relation: this clinical feature is this phenotype This clinical feature is Deep-set eyes, annotated with Deeply set eye (HP:0000490). HP:0000490 is a phenotype from the Human Phenotype Ontology.
Show evidence (1 reference)
PMID:35025765 SUPPORT Human Clinical
"Dysmorphic features included a mask senile-like face (progeroid), deep-set eyes, absent lower lid eyelashes"
Deep-set eyes in the family B proband.
Head and Neck 10
Hypoplastic Nose Short nose HP:0003196 Human Phenotype Ontology (HP) Relation: this clinical feature is this phenotype This clinical feature is Hypoplastic, tiny pinched nose, annotated with Short nose (HP:0003196), qualified as infantile onset, up to 1.5y. HP:0003196 is a phenotype from the Human Phenotype Ontology.
Onset: INFANTILE; up to 1.5y
Show evidence (2 references)
PMID:35025765 SUPPORT Human Clinical
"At 18 months of age, medical evaluation was sought, since her nose remained exceptionally small compared with the rest of her face"
Nasal hypoplasia evident by 18 months.
PMID:35025765 SUPPORT Human Clinical
"a prominent nasal bridge with a tiny, pinched nose with hypoplastic alae nasi"
Same feature in the family B proband.
Anteverted Nares HP:0000463 Human Phenotype Ontology (HP) Relation: this clinical feature is this phenotype This clinical feature is Anteverted nares (HP:0000463). HP:0000463 is a phenotype from the Human Phenotype Ontology.
Show evidence (1 reference)
PMID:35025765 SUPPORT Human Clinical
"a tiny, pinched nose with anteverted nares, prominent premaxilla, and a smooth philtrum"
Reported in the family A sisters' facial description.
Prominent Premaxilla Prominence of the premaxilla HP:0010759 Human Phenotype Ontology (HP) Relation: this clinical feature is this phenotype This clinical feature is Prominent premaxilla, annotated with Prominence of the premaxilla (HP:0010759). HP:0010759 is a phenotype from the Human Phenotype Ontology.
Show evidence (2 references)
PMID:35025765 SUPPORT Human Clinical
"The proband’s dysmorphic features included a round face, redness of eyes, a tiny, pinched nose with anteverted nares, prominent premaxilla, and a smooth philtrum"
Prominent premaxilla in the family A proband.
PMID:35025765 SUPPORT Human Clinical
"a prominent nasal bridge with a tiny, pinched nose with hypoplastic alae nasi, prominent premaxilla, thin lips, and a smooth philtrum"
Prominent premaxilla in the family B proband.
Smooth Philtrum HP:0000319 Human Phenotype Ontology (HP) Relation: this clinical feature is this phenotype This clinical feature is Smooth philtrum (HP:0000319). HP:0000319 is a phenotype from the Human Phenotype Ontology.
Show evidence (2 references)
PMID:35025765 SUPPORT Human Clinical
"The proband’s dysmorphic features included a round face, redness of eyes, a tiny, pinched nose with anteverted nares, prominent premaxilla, and a smooth philtrum"
Smooth philtrum in the family A proband.
PMID:35025765 SUPPORT Human Clinical
"a prominent nasal bridge with a tiny, pinched nose with hypoplastic alae nasi, prominent premaxilla, thin lips, and a smooth philtrum"
Smooth philtrum in the family B proband.
Round Face HP:0000311 Human Phenotype Ontology (HP) Relation: this clinical feature is this phenotype This clinical feature is Round face (HP:0000311). HP:0000311 is a phenotype from the Human Phenotype Ontology.
Show evidence (1 reference)
PMID:35025765 SUPPORT Human Clinical
"The proband’s dysmorphic features included a round face"
Round face in the family A proband.
Thin Lips Thin vermilion border HP:0000233 Human Phenotype Ontology (HP) Relation: this clinical feature is this phenotype This clinical feature is Thin lips, annotated with Thin vermilion border (HP:0000233). HP:0000233 is a phenotype from the Human Phenotype Ontology.
Show evidence (1 reference)
PMID:35025765 SUPPORT Human Clinical
"prominent premaxilla, thin lips, and a smooth philtrum"
Thin lips in the family B proband.
Absent Lower Eyelid Eyelashes Absent eyelashes HP:0000561 Human Phenotype Ontology (HP) Relation: this clinical feature is this phenotype This clinical feature is Absent lower eyelid eyelashes, annotated with Absent eyelashes (HP:0000561). HP:0000561 is a phenotype from the Human Phenotype Ontology.
Show evidence (1 reference)
PMID:35025765 SUPPORT Human Clinical
"deep-set eyes, absent lower lid eyelashes"
Absent lower lashes in the family B proband.
Nocturnal Lagophthalmos HP:0030002 Human Phenotype Ontology (HP) Relation: this clinical feature is this phenotype This clinical feature is Eyes remain open during sleep, annotated with Nocturnal lagophthalmos (HP:0030002). HP:0030002 is a phenotype from the Human Phenotype Ontology.
Show evidence (1 reference)
PMID:35025765 SUPPORT Human Clinical
"her eyes remained open while sleeping"
Incomplete eyelid closure during sleep in the family A proband.
Delayed Eruption of Permanent Teeth HP:0000696 Human Phenotype Ontology (HP) Relation: this clinical feature is this phenotype This clinical feature is Delayed eruption of permanent teeth (HP:0000696). HP:0000696 is a phenotype from the Human Phenotype Ontology.
Show evidence (1 reference)
PMID:35025765 SUPPORT Human Clinical
"however, eruption of her permanent teeth was delayed"
Family A proband.
Decreased Head Circumference HP:0040195 Human Phenotype Ontology (HP) Relation: this clinical feature is this phenotype This clinical feature is Decreased head circumference (HP:0040195). HP:0040195 is a phenotype from the Human Phenotype Ontology.
Show evidence (2 references)
PMID:35025765 SUPPORT Human Clinical
"a weight of 22.1 kg (z score, -8.47), and a head circumference of 50.8 cm (z score, -2.92)"
Head circumference below -2 SD in the family B proband at 14 years 9 months.
PMID:35025765 SUPPORT Human Clinical
"a weight of 22.5 kg (z score, -2.05), and a head circumference of 50 cm (z score, -1.64)"
Mildly reduced head circumference in the family A proband.
Immune 1
Recurrent Chest Infections Recurrent lower respiratory tract infections HP:0002783 Human Phenotype Ontology (HP) Relation: this clinical feature is this phenotype This clinical feature is Recurrent chest infections, annotated with Recurrent lower respiratory tract infections (HP:0002783). HP:0002783 is a phenotype from the Human Phenotype Ontology.
Show evidence (1 reference)
PMID:35025765 SUPPORT Human Clinical
"Her other medical problems at that time were thrombocytopenia of undetermined cause and recurrent chest infections."
Family B proband.
Integument 7
Reduced Subcutaneous Fat Reduced subcutaneous adipose tissue HP:0003758 Human Phenotype Ontology (HP) Relation: this clinical feature is this phenotype This clinical feature is Reduced subcutaneous adipose tissue (HP:0003758). HP:0003758 is a phenotype from the Human Phenotype Ontology.
Show evidence (2 references)
PMID:35025765 SUPPORT Human Clinical
"She had dysmorphism including a somewhat aged (progeroid) appearance with little subcutaneous fat"
Reduced subcutaneous fat in the younger family A sister.
PMID:35025765 SUPPORT Human Clinical
"The proband had thin extremities with hypoplastic muscles and subcutaneous fat."
Reduced subcutaneous fat in the family B proband.
Progeroid Facial Appearance 3/3 HP:0005328 Human Phenotype Ontology (HP) Relation: this clinical feature is this phenotype This clinical feature is Progeroid facial appearance (HP:0005328). HP:0005328 is a phenotype from the Human Phenotype Ontology.
Show evidence (2 references)
PMID:36805074 SUPPORT REVIEW SYNTHESIS Human Clinical
"All three probands of ages 9 yr 8 mo, 4 yr, 0 mo, and 14 yr, 9 mo at time of evaluation displayed photosensitivity, xeroderma, characteristic progeroid facial features, and slender elongated thumbs accompanied by other skeletal abnormalities."
States the feature was present in all three individuals (3/3).
PMID:35025765 SUPPORT Human Clinical
"It appears that the defining clinical features of RECON syndrome include skin photosensitivity, xeroderma, and a progeroid-like facial appearance with a tiny, pinched nose and prominent premaxilla."
The discovering authors name the progeroid face as a defining feature.
Xeroderma 3/3 Dry skin HP:0000958 Human Phenotype Ontology (HP) Relation: this clinical feature is this phenotype This clinical feature is Xeroderma, annotated with Dry skin (HP:0000958). HP:0000958 is a phenotype from the Human Phenotype Ontology.
Show evidence (2 references)
PMID:36805074 SUPPORT REVIEW SYNTHESIS Human Clinical
"All three probands of ages 9 yr 8 mo, 4 yr, 0 mo, and 14 yr, 9 mo at time of evaluation displayed photosensitivity, xeroderma, characteristic progeroid facial features, and slender elongated thumbs"
States the feature was present in all three individuals (3/3).
PMID:35025765 SUPPORT Human Clinical
"we observed thin, dry skin (xeroderma) with areas of desquamation (scaling), mainly on exposed body parts, suggestive of photosensitivity"
Clinical description in the family B proband.
Cutaneous Photosensitivity 3/3 HP:0000992 Human Phenotype Ontology (HP) Relation: this clinical feature is this phenotype This clinical feature is Cutaneous photosensitivity (HP:0000992). HP:0000992 is a phenotype from the Human Phenotype Ontology.
Show evidence (3 references)
PMID:36805074 SUPPORT REVIEW SYNTHESIS Human Clinical
"All three probands of ages 9 yr 8 mo, 4 yr, 0 mo, and 14 yr, 9 mo at time of evaluation displayed photosensitivity"
States the feature was present in all three individuals (3/3).
PMID:35025765 SUPPORT Human Clinical
"The parents reported that their child had photosensitivity."
Parent report in family A.
PMID:35025765 SUPPORT Human Clinical
"The parents reported that their child was photosensitive."
Parent report in family B.
Keratosis Pilaris HP:0032152 Human Phenotype Ontology (HP) Relation: this clinical feature is this phenotype This clinical feature is Keratosis pilaris (HP:0032152). HP:0032152 is a phenotype from the Human Phenotype Ontology.
Show evidence (1 reference)
PMID:35025765 SUPPORT Human Clinical
"The proband also had livedo reticularis and keratosis pilaris"
Skin finding in the family A proband.
Localized Hirsutism HP:0009889 Human Phenotype Ontology (HP) Relation: this clinical feature is this phenotype This clinical feature is Hirsutism of the back or lower limbs, annotated with Localized hirsutism (HP:0009889). HP:0009889 is a phenotype from the Human Phenotype Ontology.
Show evidence (2 references)
PMID:35025765 SUPPORT Human Clinical
"she had mild hirsutism of the back"
Back hirsutism in the younger family A sister.
PMID:35025765 SUPPORT Human Clinical
"She had hirsutism of the lower limbs"
Lower-limb hirsutism in the family B proband.
Hyperconvex Thumb Nails HP:0008407 Human Phenotype Ontology (HP) Relation: this clinical feature is this phenotype This clinical feature is Hyperconvex thumb nails (HP:0008407). HP:0008407 is a phenotype from the Human Phenotype Ontology.
Show evidence (2 references)
PMID:35025765 SUPPORT Human Clinical
"Her thumbs were slender and elongated, with hyperconvex nails."
Family A proband.
PMID:35025765 SUPPORT Human Clinical
"her thumbs were slender and elongated, with hyperconvex nails"
Family B proband.
Limbs 2
Long Slender Thumbs 3/3 Long thumb HP:0032524 Human Phenotype Ontology (HP) Relation: this clinical feature is this phenotype This clinical feature is Slender, elongated thumbs, annotated with Long thumb (HP:0032524). HP:0032524 is a phenotype from the Human Phenotype Ontology.
Show evidence (2 references)
PMID:36805074 SUPPORT REVIEW SYNTHESIS Human Clinical
"characteristic progeroid facial features, and slender elongated thumbs accompanied by other skeletal abnormalities"
States slender elongated thumbs in all three probands (3/3; same sentence begins "All three probands").
PMID:35025765 SUPPORT Human Clinical
"Her thumbs were long and slender with proximal insertion"
Thumb finding in the younger family A sister.
Arachnodactyly HP:0001166 Human Phenotype Ontology (HP) Relation: this clinical feature is this phenotype This clinical feature is Arachnodactyly (HP:0001166). HP:0001166 is a phenotype from the Human Phenotype Ontology.
Show evidence (1 reference)
PMID:35025765 SUPPORT Human Clinical
"The proband had bilateral arachnodactyly"
Family B proband.
Musculoskeletal 2
Reduced Muscle Mass Decreased muscle mass HP:0003199 Human Phenotype Ontology (HP) Relation: this clinical feature is this phenotype This clinical feature is Hypoplastic muscles, annotated with Decreased muscle mass (HP:0003199). HP:0003199 is a phenotype from the Human Phenotype Ontology.
Show evidence (2 references)
PMID:35025765 SUPPORT Human Clinical
"The proband had thin extremities with hypoplastic muscles and subcutaneous fat."
Reduced muscle bulk in the family B proband.
PMID:35025765 SUPPORT Human Clinical
"the progeroid-like facial appearance, growth retardation, and muscle wasting are somewhat reminiscent of WS"
The authors list muscle wasting among the Werner-like features.
Joint Hypermobility HP:0001382 Human Phenotype Ontology (HP) Relation: this clinical feature is this phenotype This clinical feature is Mild joint hypermobility, annotated with Joint hypermobility (HP:0001382). HP:0001382 is a phenotype from the Human Phenotype Ontology.
Show evidence (2 references)
PMID:35025765 SUPPORT Human Clinical
"She had slight hyperextension of the elbows but no joint laxity in the fingers."
Family A proband.
PMID:35025765 SUPPORT Human Clinical
"We noted minor joint laxity of the fingers"
Younger family A sister.
Cellular 2
Chromosome Breakage HP:0040012 Human Phenotype Ontology (HP) Relation: this clinical feature is this phenotype This clinical feature is Increased spontaneous and topoisomerase-poison-induced chromosome breakage, annotated with Chromosome breakage (HP:0040012). HP:0040012 is a phenotype from the Human Phenotype Ontology.
Show evidence (1 reference)
PMID:35025765 SUPPORT In Vitro
"the RECQL1-P1-1 and RECQL1-P2 LCLs had higher levels of spontaneous and CPT- or ETOP-induced chromosome breakage than did 2 normal LCLs"
Cultured patient cells show increased breakage.
Increased Sister Chromatid Exchange Increased susceptibility to spontaneous sister chromatid exchange HP:0010998 Human Phenotype Ontology (HP) Relation: this clinical feature is this phenotype This clinical feature is Mildly increased sister chromatid exchange, annotated with Increased susceptibility to spontaneous sister chromatid exchange (HP:0010998). HP:0010998 is a phenotype from the Human Phenotype Ontology.
Show evidence (1 reference)
PMID:35025765 SUPPORT In Vitro
"LCLs derived from both RECQL1-P1-1 and RECQL1-P2 exhibited a mild increase in spontaneous and DNA damage–induced sister chromatid exchanges"
Mild SCE increase in both patients' cell lines.
Growth 2
Short Stature HP:0004322 Human Phenotype Ontology (HP) Relation: this clinical feature is this phenotype This clinical feature is Postnatal short stature, annotated with Short stature (HP:0004322). HP:0004322 is a phenotype from the Human Phenotype Ontology.
Show evidence (3 references)
PMID:35025765 SUPPORT Human Clinical
"The affected individuals had short stature, progeroid facial features, a hypoplastic nose, xeroderma, and skin photosensitivity"
Short stature is a cardinal reported feature.
PMID:35025765 SUPPORT Human Clinical
"Follow-up measurements at age 14 years, 9 months revealed a height of 138.4 cm (z score, -3.59), a weight of 22.1 kg (z score, -8.47), and a head circumference of 50.8 cm (z score, -2.92)"
Worsening height deficit on adolescent follow-up of the family B proband.
PMID:35025765 SUPPORT Human Clinical
"The proband was born at term with a birth weight of approximately 3000 grams."
Normal term birth weight indicates the growth deficiency is postnatal.
Low Body Weight Decreased body weight HP:0004325 Human Phenotype Ontology (HP) Relation: this clinical feature is this phenotype This clinical feature is Decreased body weight (HP:0004325). HP:0004325 is a phenotype from the Human Phenotype Ontology.
Show evidence (2 references)
PMID:35025765 SUPPORT Human Clinical
"Follow-up measurements at age 14 years, 9 months revealed a height of 138.4 cm (z score, -3.59), a weight of 22.1 kg (z score, -8.47)"
Severe weight deficit in adolescence in the family B proband.
PMID:35025765 SUPPORT Human Clinical
"height of 123.8 cm (z score, -1.98), a weight of 22.5 kg (z score, -2.05)"
Low weight in the family A proband at 9 years 8 months.
🧬

Genetic Associations

1
RECQL (Biallelic hypomorphic missense (homozygous p.Ala459Ser))
Gene: RECQL hgnc:9948 HUGO Gene Nomenclature Committee (hgnc) Relation: this disease-associated gene is this gene This disease-associated gene is RECQL (hgnc:9948). hgnc:9948 is a gene from the HUGO Gene Nomenclature Committee. relationship_type: CAUSATIVE variant_origin: GERMLINE
Show evidence (3 references)
PMID:35025765 SUPPORT Human Clinical
"The affected individuals had short stature, progeroid facial features, a hypoplastic nose, xeroderma, and skin photosensitivity and were homozygous for the same missense mutation in RECQL1"
Gene discovery report of the homozygous RECQL variant in affected individuals.
PMID:35025765 SUPPORT Human Clinical
"this variant is not found in the gnomAD or Greater Middle East (GME) variome databases"
Absence from population databases supports a rare pathogenic allele.
PMID:35025765 SUPPORT Human Clinical
"these individuals are not null for RECQL1 and that the severity of the resulting clinical symptoms is likely to be tempered by the presence of some residual protein function"
The authors characterize the allele as hypomorphic and caution that the phenotype of null alleles is unknown.
🗃️

External Assertions

1
OMIM RECON progeroid syndrome
OMIM disease record OMIM:620370
OMIM phenotype entry for RECON progeroid syndrome, listed as a database cross-reference on MONDO:0957266.
🔬

Diagnosis

1
RECQL molecular genetic testing
The disease was identified by exome sequencing of the family A proband and confirmed by Sanger segregation analysis; family B was identified by clinical resemblance. No diagnostic criteria have been published, and the cellular assays used in the discovery study are research tools, not clinical tests.
exome sequencing NCIT:C19770 NCI Thesaurus (NCIT)
Show evidence (1 reference)
PMID:35025765 SUPPORT Human Clinical
"To identify the genetic cause of the disorder found in family A, we performed whole-exome sequencing on DNA from the proband (III-2) of family A."
Exome sequencing identified the causal variant.
📊

Prevalence

1
Worldwide (published case reports)
Cases In Literature Ultra Rare
Three genotyped affected individuals from two families, all homozygous for RECQL p.Ala459Ser. Two adult first cousins of the family A parents were reported to have similar features but were not genotyped or examined.
Show evidence (2 references)
PMID:36805074 SUPPORT REVIEW SYNTHESIS Human Clinical
"only 3 affected individuals have been identified, all with the same mutation"
The 2023 perspective by the discovering group states the total published cohort size.
PMID:35025765 SUPPORT Human Clinical
"The family history was also positive for 2 common adult first cousins of the parents who had similar clinical features. Unfortunately, these relatives were not available for genetic evaluation or a detailed medical workup."
Two further, ungenotyped relatives with similar features are reported but are not counted as confirmed cases.
🔀

Differential Diagnoses

5

Conditions with similar clinical presentations that must be differentiated from RECON Progeroid Syndrome:

Overlapping Features WRN-related progeroid syndrome. The progeroid face, growth deficiency and muscle wasting resemble it, and the cellular fork-restart and degradation defects are closest to those of WRN-deficient cells. Werner syndrome presents later, with loss of the adolescent growth spurt.
Distinguishing Features
  • Growth failure evident in early childhood favors RECON syndrome.
  • Absence of the pubertal growth spurt as the first sign favors Werner syndrome.
Show evidence (2 references)
PMID:35025765 SUPPORT Human Clinical
"the progeroid-like facial appearance, growth retardation, and muscle wasting are somewhat reminiscent of WS"
The discovering authors draw the Werner comparison.
PMID:36805074 SUPPORT REVIEW SYNTHESIS Human Clinical
"the lack of a growth spurt, that usually occurs during the teenage years, is only observed in patients with WS"
Distinguishing growth pattern.
Overlapping Features BLM-related RecQ disorder with growth deficiency and photosensitivity.
Distinguishing Features
  • Microcephaly, immunodeficiency and type 2 diabetes favor Bloom syndrome.
  • Only a mild sister chromatid exchange increase in RECON syndrome cells.
Show evidence (1 reference)
PMID:35025765 SUPPORT Human Clinical
"individuals with BS can be differentiated by the presence of microcephaly, immunodeficiency, and type 2 diabetes"
Distinguishing features stated by the discovering authors.
Overlapping Features RECQL4-related disorders (Rothmund-Thomson, RAPADILINO, Baller-Gerold) share postnatal growth deficiency but have limb and skeletal malformations absent in RECON syndrome.
Distinguishing Features
  • Absent or hypoplastic thumbs, radial ray defects and absent patellae favor a RECQL4 disorder; RECON syndrome has long slender thumbs.
  • Poikiloderma favors Rothmund-Thomson syndrome.
Show evidence (2 references)
PMID:35025765 SUPPORT Human Clinical
"patients with a RECQL4-associated disorder can be identified by absent or hypoplastic thumbs, radial ray defects, absent or hypoplastic patellae, limb malformations, cataracts, reduced bone density, anemia, neutropenia, and craniosynostosis"
Distinguishing features stated by the discovering authors.
PMID:35025765 SUPPORT Human Clinical
"those with RECON syndrome only share postnatal growth retardation"
Overlap is limited to growth deficiency.
Overlapping Features Photosensitive progeroid disorder with growth failure. ERCC6 and ERCC8 sequencing was normal in the family B proband before RECQL was identified.
Distinguishing Features
  • Normal ERCC6 and ERCC8 sequencing.
  • Age-appropriate development in RECON syndrome.
Show evidence (2 references)
PMID:35025765 SUPPORT Human Clinical
"Genetic testing included chromosome analysis, chromosome breakage studies with diepoxybutane, and Sanger sequencing for mutations in ERCC6 and ERCC8, all of which were normal."
Cockayne syndrome was excluded in the work-up.
PMID:35025765 SUPPORT Human Clinical
"Her developmental milestones, including motor, speech, and communication skills, were age appropriate."
Normal development, unlike the neurodevelopmental course of Cockayne syndrome.
Overlapping Features Chromosome instability disorder with growth deficiency; diepoxybutane chromosome breakage was normal in the family B proband.
Distinguishing Features
  • Normal diepoxybutane-induced chromosome breakage in RECON syndrome.
Show evidence (1 reference)
PMID:35025765 SUPPORT Human Clinical
"Genetic testing included chromosome analysis, chromosome breakage studies with diepoxybutane, and Sanger sequencing for mutations in ERCC6 and ERCC8, all of which were normal."
A normal DEB test argues against Fanconi anemia.
🐁

Animal Models

1
Recql-deficient mouse
Recql-deficient mice have no apparent organismal phenotype, while their embryonic fibroblasts show aneuploidy, spontaneous chromosome breakage, translocations, radiosensitivity and elevated sister chromatid exchange. It is a null model, whereas the only known human allele is hypomorphic.
No apparent phenotypic difference from wild type Chromosome breakage in embryonic fibroblasts
Species
Mus musculus
Genotype
Recql-/- (targeted disruption)
Publication
Show evidence (1 reference)
PMID:17158923 SUPPORT Model Organism
"RECQL-deficient mice did not exhibit any apparent phenotypic differences compared to wild-type mice."
The null mouse lacks an organismal phenotype.
{ }

Source YAML

click to show
name: RECON Progeroid Syndrome
creation_date: "2026-09-23T00:00:00Z"
category: Mendelian
description: >-
  RECON (RECql ONe) syndrome is an autosomal recessive genome instability
  disorder with a progeroid facial gestalt, caused by biallelic variants in
  RECQL (RECQL1), the RecQ-family 3'-5' DNA helicase that had no associated
  human disease before 2022. The entire published cohort is three girls from
  two Middle Eastern families (one consanguineous), all homozygous for the same
  zinc-binding-domain missense variant, p.Ala459Ser, and all evaluated in
  childhood (4 to 14 years). Growth deficiency is postnatal: birth weights at
  term were normal, while height and especially weight fell below the mean,
  most severely in the one child followed into adolescence. Cutaneous
  photosensitivity, xeroderma, a progeroid face with a tiny pinched
  (hypoplastic) nose and prominent premaxilla, and slender elongated thumbs
  were present in all three; reduced subcutaneous fat, dry eyes, red eyes and
  hirsutism were seen in some. Developmental milestones were age appropriate in
  all three. The variant is hypomorphic: the mutant protein is expressed and
  localizes normally but has reduced ATPase, helicase and reversed-fork
  restoration activity with preserved strand annealing, and patient cells show
  spontaneous replication fork stalling, defective fork restart, impaired
  repair of topoisomerase-poison-induced breaks and increased chromosome
  breakage. How this cellular defect produces the clinical features is not
  established. No cancers have been reported in affected individuals or their
  heterozygous relatives, but the cohort is too small and young to assess
  cancer risk or adult natural history, and no disease-specific management or
  surveillance has been published.
parents:
- Genetic Disease
synonyms:
- RECON syndrome
- RECQL1-related progeroid syndrome
notes: >-
  Lump/split. This entry covers only the biallelic (autosomal recessive)
  progeroid disorder. Heterozygous RECQL loss-of-function variants have been
  proposed as a moderate-penetrance breast cancer susceptibility factor; that
  is a separate, contested gene-disease claim (ClinGen Hereditary Cancer GCEP
  classifies RECQL with hereditary breast carcinoma, autosomal dominant, as
  Disputed, assertion CGGV:assertion_777b2a5c-459f-4eee-8a6d-e8bf15b88aca,
  2023-03-13) and is recorded here only as a discussion attached to the gene,
  never as a phenotype of RECON syndrome. Gene-disease validity for RECQL with
  RECON progeroid syndrome itself has no ClinGen curation; in the GenCC
  submissions export (downloaded 2026-09-23) it is classified Limited by Labcorp
  Genetics (2023-07-13) and Moderate by PanelApp Australia (2025-01-17). No
  Orphanet disorder record for RECON syndrome was found in the Orphadata
  en_product1.xml release pinned in data/orphadata/MANIFEST.yaml (search for
  "RECON" and "RECQL" returned no match). No GeneReviews chapter exists. All
  phenotype data derive from one primary report of three individuals
  (PMID:35025765); frequencies are given as counts only where a source states
  the denominator. Developmental milestones were age appropriate in each of
  the three. No treatment, surveillance protocol, or clinical trial has been
  published, so the entry has no treatments section.
disease_term:
  preferred_term: RECON progeroid syndrome
  term:
    id: MONDO:0957266
    label: RECON progeroid syndrome
mappings:
  mondo_mappings:
  - term:
      id: MONDO:0957266
      label: RECON progeroid syndrome
    mapping_predicate: skos:exactMatch
    mapping_source: MONDO
    mapping_justification: Primary MONDO disease identifier for this entry.
external_assertions:
- name: OMIM RECON progeroid syndrome
  source: OMIM
  assertion_type: disease_record
  external_id: OMIM:620370
  description: >-
    OMIM phenotype entry for RECON progeroid syndrome, listed as a database
    cross-reference on MONDO:0957266.
classifications:
  harrisons_chapter:
  - classification_value: GENETICS_ENVIRONMENT_DISEASE
    evidence:
    - reference: PMID:35025765
      reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
      supports: SUPPORT
      evidence_source: HUMAN_CLINICAL
      snippet: "we identify 2 families with a genome instability disorder that we have named RECON (RECql ONe) syndrome, caused by biallelic mutations in the RECQL gene"
      explanation: >-
        A single-gene inherited genome instability disorder, classified under
        genetics.
prevalence:
- population: Worldwide (published case reports)
  measure_type: CASES_IN_LITERATURE
  prevalence_class: ULTRA_RARE
  notes: >-
    Three genotyped affected individuals from two families, all homozygous for
    RECQL p.Ala459Ser. Two adult first cousins of the family A parents were
    reported to have similar features but were not genotyped or examined.
  evidence:
  - reference: PMID:36805074
    reference_title: "Discovery of a new hereditary RECQ helicase disorder RECON syndrome positions the replication stress response and genome homeostasis as centrally important processes in aging and age-related disease."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    quote_role: REVIEW_SYNTHESIS
    snippet: "only 3 affected individuals have been identified, all with the same mutation"
    explanation: >-
      The 2023 perspective by the discovering group states the total published
      cohort size.
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "The family history was also positive for 2 common adult first cousins of the parents who had similar clinical features. Unfortunately, these relatives were not available for genetic evaluation or a detailed medical workup."
    explanation: >-
      Two further, ungenotyped relatives with similar features are reported
      but are not counted as confirmed cases.
inheritance:
- name: Autosomal recessive inheritance
  inheritance_term:
    preferred_term: Autosomal recessive inheritance
    term:
      id: HP:0000007
      label: Autosomal recessive inheritance
  description: >-
    All three affected individuals were homozygous for RECQL p.Ala459Ser,
    while available parents and eight unaffected siblings were heterozygous or
    wild type. Family A parents were double first cousins; family B reported no
    known consanguinity. No recurrence-risk figure has been published for this
    disease specifically.
  evidence:
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "All 3 affected individuals (III-2 and III-4 from family A and III-4 from family B) were homozygous for this variant, whereas the available parents and 8 healthy siblings were either heterozygous or WT"
    explanation: >-
      Segregation of the homozygous genotype with disease, with unaffected
      heterozygous relatives, supports recessive inheritance.
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "She was the second of 5 children born to parents of Middle Eastern descent, who were double first cousins"
    explanation: Parental consanguinity in family A.
genetic:
- name: RECQL
  association: Biallelic hypomorphic missense (homozygous p.Ala459Ser)
  relationship_type: CAUSATIVE
  variant_origin: GERMLINE
  gene_term:
    preferred_term: RECQL
    term:
      id: hgnc:9948
      label: RECQL
  notes: >-
    Only one disease-causing allele is known, NM_032941.2:c.1375G>T
    p.(Ala459Ser), in the zinc-binding domain, found homozygous in two families
    not known to be related. It is absent from gnomAD and the Greater Middle
    East variome. Whether null or other RECQL alleles produce the same or a
    more severe phenotype is unknown.
  evidence:
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "The affected individuals had short stature, progeroid facial features, a hypoplastic nose, xeroderma, and skin photosensitivity and were homozygous for the same missense mutation in RECQL1"
    explanation: Gene discovery report of the homozygous RECQL variant in affected individuals.
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "this variant is not found in the gnomAD or Greater Middle East (GME) variome databases"
    explanation: Absence from population databases supports a rare pathogenic allele.
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "these individuals are not null for RECQL1 and that the severity of the resulting clinical symptoms is likely to be tempered by the presence of some residual protein function"
    explanation: >-
      The authors characterize the allele as hypomorphic and caution that the
      phenotype of null alleles is unknown.
pathophysiology:
- name: RECQL1 Zinc-Binding Domain Hypomorphic Missense Variant
  description: >-
    Homozygous germline RECQL c.1375G>T p.(Ala459Ser) substitutes a conserved
    alanine in the RECQL1 zinc-binding domain. Mutant protein is expressed at
    normal levels in patient lymphoblastoid cells, localizes to the nucleus and
    still associates with PARP1, so the defect is catalytic rather than a loss
    of protein.
  biological_scale: MOLECULAR
  genes:
  - preferred_term: RECQL
    term:
      id: hgnc:9948
      label: RECQL
  genetic_context:
    variant_origin: GERMLINE
    zygosity: HOMOZYGOUS
    variant_type: single nucleotide variant
    functional_impact_category: PARTIAL_LOSS_OF_FUNCTION
    gene:
      preferred_term: RECQL
      term:
        id: hgnc:9948
        label: RECQL
  evidence:
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "were homozygous for the same missense mutation in RECQL1 (p.Ala459Ser), located within its zinc binding domain"
    explanation: Identifies the causal variant and its domain location.
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: IN_VITRO
    snippet: "We observed no obvious differences in the expression of RECQL1 protein in LCLs from the 2 affected patients when compared with the expression of RECQL1 in LCLs from 2 normal individuals"
    explanation: Mutant protein is stably expressed in patient cells.
  downstream:
  - target: Reduced RECQL1 ATPase and Helicase Activity
    causal_link_type: DIRECT
    evidence:
    - reference: PMID:35025765
      reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
      supports: SUPPORT
      evidence_source: IN_VITRO
      snippet: "Biochemical analysis of the mutant RECQL1 protein revealed that the p.A459S missense mutation compromised its ATPase, helicase, and fork restoration activity, while its capacity to promote single-strand DNA annealing was largely unaffected."
      explanation: Recombinant mutant protein assays link the variant to the catalytic defect.
- name: Reduced RECQL1 ATPase and Helicase Activity
  description: >-
    Recombinant RECQL1-A459S has reduced ATP turnover, reduced unwinding of
    forked duplexes and reduced restoration of reversed replication forks,
    with modestly reduced DNA binding. Single-strand annealing and
    oligomerization are preserved, so the variant selectively impairs the
    ATP-driven motor function.
  biological_scale: MOLECULAR
  genes:
  - preferred_term: RECQL
    term:
      id: hgnc:9948
      label: RECQL
  molecular_functions:
  - preferred_term: DNA helicase activity
    modifier: DECREASED
    term:
      id: GO:0003678
      label: DNA helicase activity
  - preferred_term: ATP hydrolysis activity
    modifier: DECREASED
    term:
      id: GO:0016887
      label: ATP hydrolysis activity
  evidence:
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: IN_VITRO
    snippet: "At a protein concentration of 2.5 nM, WT RECQL1 unwound nearly 60% of the DNA substrate compared with approximately 20% for mutant RECQL1"
    explanation: Quantifies the helicase deficit of the mutant protein.
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: IN_VITRO
    snippet: "WT RECQL1 had a nearly 3-fold higher kcat for ATP hydrolysis in the presence of the M13mp18 ssDNA effector compared with RECQL1-A459S"
    explanation: Quantifies the ATPase deficit of the mutant protein.
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: IN_VITRO
    snippet: "the strand annealing activity of WT and mutant RECQL1 proteins was nearly identical over a range of protein concentrations"
    explanation: Strand annealing is preserved, so the loss of function is partial and selective.
  downstream:
  - target: Defective Replication Fork Restart
    causal_link_type: DIRECT
    evidence:
    - reference: PMID:35025765
      reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
      supports: SUPPORT
      evidence_source: IN_VITRO
      snippet: "the p.A459S mutant RECQL1 consistently had a reduced ability to restore the replication fork compared with WT RECQL1"
      explanation: >-
        In a reconstituted reversed-fork assay the catalytic defect directly
        reduces fork restoration, the biochemical step underlying restart.
  - target: Stalled Replication Fork Degradation
  - target: Impaired Repair of Topoisomerase-Associated DNA Breaks
    evidence:
    - reference: PMID:35025765
      reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
      supports: SUPPORT
      evidence_source: IN_VITRO
      snippet: "At the cellular level, this mutation in RECQL1 gave rise to a defect in the ability to repair DNA damage induced by exposure to topoisomerase poisons and a failure of DNA replication to progress efficiently in the presence of abortive topoisomerase lesions."
      explanation: Links the variant to the repair defect in patient-derived cells.
- name: Stalled Replication Fork Degradation
  description: >-
    Patient fibroblasts expressing empty vector or RECQL1-A459S show a mild
    increase in nascent-strand degradation after prolonged hydroxyurea
    exposure, corrected by wild-type RECQL1. The authors attribute the
    fork-restart defect partly to this degradation.
  biological_scale: CELLULAR
  evidence:
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: IN_VITRO
    snippet: "RECQL-P1-1 fibroblasts complemented with empty vector and the p.A459S exhibited a mild increase in replication fork degradation after prolonged exposure to HU that could be complemented following the expression of WT RECQL1"
    explanation: Fiber-assay evidence of increased fork degradation, rescued by wild-type protein.
  downstream:
  - target: Defective Replication Fork Restart
    evidence:
    - reference: PMID:35025765
      reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
      supports: SUPPORT
      evidence_source: IN_VITRO
      snippet: "the replication fork restart defect present in the cells derived from patients with RECON syndrome was not only due to an inability of the mutant RECQL1 to remodel reversed forks but also resulted from the degradation of stalled forks"
      explanation: The authors attribute part of the restart defect to fork degradation.
- name: Defective Replication Fork Restart
  description: >-
    Patient lymphoblastoid cells show more spontaneously stalled forks
    (endogenous replication stress), and patient cells fail to restart forks
    stalled by topoisomerase I or II poisons, hydroxyurea or MMS. Fork speed
    and origin firing are grossly normal before treatment. The defects are
    corrected by wild-type but not A459S RECQL1.
  biological_scale: CELLULAR
  genes:
  - preferred_term: RECQL
    term:
      id: hgnc:9948
      label: RECQL
  biological_processes:
  - preferred_term: replication fork restart
    modifier: DECREASED
    term:
      id: GO:0031297
      label: replication fork processing
  evidence:
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: IN_VITRO
    snippet: "even in the absence of exposure to genotoxins, both RECQL1 LCLs had an increase in spontaneously stalled forks indicative of higher levels of endogenous replication stress"
    explanation: Spontaneous replication stress in patient cells.
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: IN_VITRO
    snippet: "these data suggest that the clinically relevant p.A459S mutation in the RECQL1 ZBD, which perturbs its catalytic activity, compromises the ability of RECQL1 to restart reversed replication forks."
    explanation: Fiber analysis in patient LCLs and complemented fibroblasts shows the restart defect.
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: IN_VITRO
    snippet: "the p.A459S mutation significantly compromised the ability of replication forks transiently stalled by HU to restart efficiently"
    explanation: The restart defect extends beyond topoisomerase lesions to nucleotide-depletion stalling.
  downstream:
  - target: Chromosomal Instability
    evidence:
    - reference: PMID:35025765
      reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
      supports: SUPPORT
      evidence_source: IN_VITRO
      snippet: "the p.A459S mutant also compromised the ability of cells to restart replication in the presence of DNA alkylation damage induced by MMS exposure, accompanied by increased chromosome breakage and cell death"
      explanation: >-
        The restart failure is accompanied by increased chromosome breakage in
        the same cells; this is co-occurrence in one experiment rather than a
        dissected causal step.
- name: Impaired Repair of Topoisomerase-Associated DNA Breaks
  description: >-
    Patient fibroblasts lacking functional RECQL1 retain more 53BP1 foci for 24
    hours after camptothecin or etoposide and have more spontaneous foci.
    ATM-dependent damage signaling is robustly activated in patient cells, so
    the defect lies in repair or replication through the lesion rather than in
    damage sensing. Breakage and translocation at the MLL locus after
    etoposide, the signature of TDP2 deficiency, was not increased.
  biological_scale: CELLULAR
  conforms_to: "genomic_instability_aging#Declining Genome Maintenance and Erroneous Repair"
  biological_processes:
  - preferred_term: double-strand break repair
    modifier: DECREASED
    term:
      id: GO:0006302
      label: double-strand break repair
  evidence:
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: IN_VITRO
    snippet: "patients’ cells expressing either the empty vector or the p.A459S-mutant RECQL1 had higher numbers of 53BP1 foci in cells throughout a 24-hour time course following exposure to CPT or ETOP than did cells expressing WT RECQL1"
    explanation: Persistent 53BP1 foci indicate slower repair of topoisomerase-poison-induced breaks.
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: IN_VITRO
    snippet: "both RECQL1-mutant cell lines showed robust activation of the ATM-dependent DDR"
    explanation: Damage signaling is intact, localizing the defect downstream of sensing.
  downstream:
  - target: Chromosomal Instability
    evidence:
    - reference: PMID:35025765
      reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
      supports: SUPPORT
      evidence_source: IN_VITRO
      snippet: "cells containing the empty vector or expressing p.A459S-mutant RECQL1 exhibited significantly greater numbers of spontaneous and CPT- or ETOP-induced micronuclei than did their WT RECQL1–expressing counterparts"
      explanation: Unrepaired breaks manifest as micronuclei, a marker of genome instability.
- name: Chromosomal Instability
  description: >-
    Patient lymphoblastoid cells and fibroblasts show increased spontaneous
    and camptothecin- or etoposide-induced chromosome breakage and radial
    exchanges, more micronuclei, and a mild increase in sister chromatid
    exchange; the breakage is corrected by wild-type RECQL1. Constitutional
    karyotype and diepoxybutane-induced breakage were normal in family B, so
    this is a cellular, not a karyotypic, finding. Its link to the clinical
    features has not been demonstrated.
  biological_scale: CELLULAR
  evidence:
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: IN_VITRO
    snippet: "the RECQL1-P1-1 and RECQL1-P2 LCLs had higher levels of spontaneous and CPT- or ETOP-induced chromosome breakage than did 2 normal LCLs"
    explanation: Increased chromosome breakage in both patients' cell lines.
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: IN_VITRO
    snippet: "both the increased spontaneous and CPT- or ETOP-induced chromosome breakages were also observed in fibroblasts from patient RECQL1-P1 and could be complemented by the expression of exogenous WT but not mutant A459S RECQL1"
    explanation: Complementation ties the breakage phenotype to RECQL1 dysfunction.
  downstream:
  - target: Chromosome Breakage
  - target: Increased Sister Chromatid Exchange
phenotypes:
- category: Growth
  name: Short Stature
  description: >-
    Postnatal. Birth weights at term were about 3000 g and 3500 g. Height
    z-scores were -1.98 (9 years 8 months) and -1.02 (4 years) in the family A
    sisters; the family B proband went from -0.7 at 5 years 10 months to -3.59
    at 14 years 9 months. The discovering authors list postnatal growth
    retardation as the only feature shared with Bloom and RECQL4-related
    syndromes.
  phenotype_term:
    preferred_term: Postnatal short stature
    term:
      id: HP:0004322
      label: Short stature
  evidence:
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "The affected individuals had short stature, progeroid facial features, a hypoplastic nose, xeroderma, and skin photosensitivity"
    explanation: Short stature is a cardinal reported feature.
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "Follow-up measurements at age 14 years, 9 months revealed a height of 138.4 cm (z score, -3.59), a weight of 22.1 kg (z score, -8.47), and a head circumference of 50.8 cm (z score, -2.92)"
    explanation: Worsening height deficit on adolescent follow-up of the family B proband.
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "The proband was born at term with a birth weight of approximately 3000 grams."
    explanation: Normal term birth weight indicates the growth deficiency is postnatal.
- category: Growth
  name: Low Body Weight
  description: >-
    Weight z-scores were -2.05 and -1.05 in the family A sisters and -3.4 at 5
    years 10 months falling to -8.47 at 14 years 9 months in the family B
    proband, disproportionately worse than height.
  phenotype_term:
    preferred_term: Decreased body weight
    term:
      id: HP:0004325
      label: Decreased body weight
  evidence:
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "Follow-up measurements at age 14 years, 9 months revealed a height of 138.4 cm (z score, -3.59), a weight of 22.1 kg (z score, -8.47)"
    explanation: Severe weight deficit in adolescence in the family B proband.
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "height of 123.8 cm (z score, -1.98), a weight of 22.5 kg (z score, -2.05)"
    explanation: Low weight in the family A proband at 9 years 8 months.
- category: Growth
  name: Reduced Subcutaneous Fat
  description: >-
    Little subcutaneous fat in the younger family A sister; thin extremities
    with hypoplastic subcutaneous fat in the family B proband.
  phenotype_term:
    preferred_term: Reduced subcutaneous adipose tissue
    term:
      id: HP:0003758
      label: Reduced subcutaneous adipose tissue
  evidence:
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "She had dysmorphism including a somewhat aged (progeroid) appearance with little subcutaneous fat"
    explanation: Reduced subcutaneous fat in the younger family A sister.
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "The proband had thin extremities with hypoplastic muscles and subcutaneous fat."
    explanation: Reduced subcutaneous fat in the family B proband.
- category: Musculoskeletal
  name: Reduced Muscle Mass
  description: >-
    Hypoplastic limb muscles in the family B proband; the authors describe
    muscle wasting as reminiscent of Werner syndrome.
  phenotype_term:
    preferred_term: Hypoplastic muscles
    term:
      id: HP:0003199
      label: Decreased muscle mass
  evidence:
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "The proband had thin extremities with hypoplastic muscles and subcutaneous fat."
    explanation: Reduced muscle bulk in the family B proband.
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "the progeroid-like facial appearance, growth retardation, and muscle wasting are somewhat reminiscent of WS"
    explanation: The authors list muscle wasting among the Werner-like features.
- category: Craniofacial
  name: Progeroid Facial Appearance
  description: >-
    An aged, mask-like facial appearance with little subcutaneous fat, present
    by early childhood in all three affected individuals.
  frequency: 3/3
  diagnostic: true
  phenotype_term:
    preferred_term: Progeroid facial appearance
    term:
      id: HP:0005328
      label: Progeroid facial appearance
  evidence:
  - reference: PMID:36805074
    reference_title: "Discovery of a new hereditary RECQ helicase disorder RECON syndrome positions the replication stress response and genome homeostasis as centrally important processes in aging and age-related disease."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    quote_role: REVIEW_SYNTHESIS
    snippet: "All three probands of ages 9 yr 8 mo, 4 yr, 0 mo, and 14 yr, 9 mo at time of evaluation displayed photosensitivity, xeroderma, characteristic progeroid facial features, and slender elongated thumbs accompanied by other skeletal abnormalities."
    explanation: States the feature was present in all three individuals (3/3).
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "It appears that the defining clinical features of RECON syndrome include skin photosensitivity, xeroderma, and a progeroid-like facial appearance with a tiny, pinched nose and prominent premaxilla."
    explanation: The discovering authors name the progeroid face as a defining feature.
- category: Craniofacial
  name: Hypoplastic Nose
  description: >-
    A tiny, pinched nose described in all three individuals, with hypoplastic
    alae nasi in the family B proband. In the family A proband the small nose
    was the reason medical evaluation was first sought, at 18 months.
  diagnostic: true
  phenotype_term:
    preferred_term: Hypoplastic, tiny pinched nose
    term:
      id: HP:0003196
      label: Short nose
    onset:
      onset_category: INFANTILE
      max_age_years: 1.5
      notes: Noted by 18 months in the family A proband; earlier onset not documented.
  evidence:
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "At 18 months of age, medical evaluation was sought, since her nose remained exceptionally small compared with the rest of her face"
    explanation: Nasal hypoplasia evident by 18 months.
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "a prominent nasal bridge with a tiny, pinched nose with hypoplastic alae nasi"
    explanation: Same feature in the family B proband.
- category: Craniofacial
  name: Anteverted Nares
  description: Anteverted nares in both family A sisters.
  phenotype_term:
    preferred_term: Anteverted nares
    term:
      id: HP:0000463
      label: Anteverted nares
  evidence:
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "a tiny, pinched nose with anteverted nares, prominent premaxilla, and a smooth philtrum"
    explanation: Reported in the family A sisters' facial description.
- category: Craniofacial
  name: Prominent Premaxilla
  description: Reported in all three individuals.
  phenotype_term:
    preferred_term: Prominent premaxilla
    term:
      id: HP:0010759
      label: Prominence of the premaxilla
  evidence:
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "The proband’s dysmorphic features included a round face, redness of eyes, a tiny, pinched nose with anteverted nares, prominent premaxilla, and a smooth philtrum"
    explanation: Prominent premaxilla in the family A proband.
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "a prominent nasal bridge with a tiny, pinched nose with hypoplastic alae nasi, prominent premaxilla, thin lips, and a smooth philtrum"
    explanation: Prominent premaxilla in the family B proband.
- category: Craniofacial
  name: Smooth Philtrum
  description: Reported in all three individuals.
  phenotype_term:
    preferred_term: Smooth philtrum
    term:
      id: HP:0000319
      label: Smooth philtrum
  evidence:
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "The proband’s dysmorphic features included a round face, redness of eyes, a tiny, pinched nose with anteverted nares, prominent premaxilla, and a smooth philtrum"
    explanation: Smooth philtrum in the family A proband.
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "a prominent nasal bridge with a tiny, pinched nose with hypoplastic alae nasi, prominent premaxilla, thin lips, and a smooth philtrum"
    explanation: Smooth philtrum in the family B proband.
- category: Craniofacial
  name: Round Face
  description: Reported in the family A proband.
  phenotype_term:
    preferred_term: Round face
    term:
      id: HP:0000311
      label: Round face
  evidence:
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "The proband’s dysmorphic features included a round face"
    explanation: Round face in the family A proband.
- category: Craniofacial
  name: Thin Lips
  description: Reported in the family B proband.
  phenotype_term:
    preferred_term: Thin lips
    term:
      id: HP:0000233
      label: Thin vermilion border
  evidence:
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "prominent premaxilla, thin lips, and a smooth philtrum"
    explanation: Thin lips in the family B proband.
- category: Craniofacial
  name: Small Attached Earlobes
  description: Small ears with small, attached earlobes in the family B proband.
  phenotype_term:
    preferred_term: Small, attached earlobes
    term:
      id: HP:0000385
      label: Small earlobe
  evidence:
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "small ears with small, attached earlobes"
    explanation: Ear finding in the family B proband.
- category: Ocular
  name: Deeply Set Eyes
  description: Reported in the family B proband.
  phenotype_term:
    preferred_term: Deep-set eyes
    term:
      id: HP:0000490
      label: Deeply set eye
  evidence:
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "Dysmorphic features included a mask senile-like face (progeroid), deep-set eyes, absent lower lid eyelashes"
    explanation: Deep-set eyes in the family B proband.
- category: Ocular
  name: Absent Lower Eyelid Eyelashes
  description: Reported in the family B proband; upper lashes not described as affected.
  phenotype_term:
    preferred_term: Absent lower eyelid eyelashes
    term:
      id: HP:0000561
      label: Absent eyelashes
  evidence:
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "deep-set eyes, absent lower lid eyelashes"
    explanation: Absent lower lashes in the family B proband.
- category: Ocular
  name: Dry Eyes
  description: >-
    Xerophthalmia in the family A proband, present at the 18-month
    evaluation. Not described in the other two individuals.
  phenotype_term:
    preferred_term: Xerophthalmia (dry eyes)
    term:
      id: HP:0001097
      label: Keratoconjunctivitis sicca
  evidence:
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "her eyes remained open while sleeping, and she had xerophthalmia (dry eyes) and xeroderma (dry skin) with scaling"
    explanation: Dry eyes in the family A proband by 18 months.
- category: Ocular
  name: Nocturnal Lagophthalmos
  description: Eyes remained open during sleep in the family A proband at 18 months.
  phenotype_term:
    preferred_term: Eyes remain open during sleep
    term:
      id: HP:0030002
      label: Nocturnal lagophthalmos
  evidence:
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "her eyes remained open while sleeping"
    explanation: Incomplete eyelid closure during sleep in the family A proband.
- category: Ocular
  name: Red Eyes
  description: Redness of the eyes in both family A sisters.
  phenotype_term:
    preferred_term: Red eyes
    term:
      id: HP:0030953
      label: Conjunctival hyperemia
  evidence:
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "somewhat aged (progeroid) appearance with little subcutaneous fat, red eyes"
    explanation: Red eyes in the younger family A sister.
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "The proband’s dysmorphic features included a round face, redness of eyes"
    explanation: Red eyes in the family A proband.
- category: Dermatological
  name: Xeroderma
  description: >-
    Dry, scaling skin, noted by 18 months in the family A proband; in the
    family B proband thin, dry skin with desquamation mainly on sun-exposed
    areas.
  frequency: 3/3
  diagnostic: true
  phenotype_term:
    preferred_term: Xeroderma
    term:
      id: HP:0000958
      label: Dry skin
  evidence:
  - reference: PMID:36805074
    reference_title: "Discovery of a new hereditary RECQ helicase disorder RECON syndrome positions the replication stress response and genome homeostasis as centrally important processes in aging and age-related disease."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    quote_role: REVIEW_SYNTHESIS
    snippet: "All three probands of ages 9 yr 8 mo, 4 yr, 0 mo, and 14 yr, 9 mo at time of evaluation displayed photosensitivity, xeroderma, characteristic progeroid facial features, and slender elongated thumbs"
    explanation: States the feature was present in all three individuals (3/3).
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "we observed thin, dry skin (xeroderma) with areas of desquamation (scaling), mainly on exposed body parts, suggestive of photosensitivity"
    explanation: Clinical description in the family B proband.
- category: Dermatological
  name: Cutaneous Photosensitivity
  description: >-
    Parent-reported in both families and suggested on examination by scaling
    confined mainly to sun-exposed skin. No phototesting or description of
    the skin reaction to sun has been published.
  frequency: 3/3
  diagnostic: true
  phenotype_term:
    preferred_term: Cutaneous photosensitivity
    term:
      id: HP:0000992
      label: Cutaneous photosensitivity
  evidence:
  - reference: PMID:36805074
    reference_title: "Discovery of a new hereditary RECQ helicase disorder RECON syndrome positions the replication stress response and genome homeostasis as centrally important processes in aging and age-related disease."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    quote_role: REVIEW_SYNTHESIS
    snippet: "All three probands of ages 9 yr 8 mo, 4 yr, 0 mo, and 14 yr, 9 mo at time of evaluation displayed photosensitivity"
    explanation: States the feature was present in all three individuals (3/3).
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "The parents reported that their child had photosensitivity."
    explanation: Parent report in family A.
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "The parents reported that their child was photosensitive."
    explanation: Parent report in family B.
- category: Dermatological
  name: Livedo Reticularis
  description: Reported in the family A proband.
  phenotype_term:
    preferred_term: Livedo reticularis
    term:
      id: HP:0033505
      label: Livedo reticularis
  evidence:
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "The proband also had livedo reticularis and keratosis pilaris"
    explanation: Skin finding in the family A proband.
- category: Dermatological
  name: Keratosis Pilaris
  description: Reported in the family A proband.
  phenotype_term:
    preferred_term: Keratosis pilaris
    term:
      id: HP:0032152
      label: Keratosis pilaris
  evidence:
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "The proband also had livedo reticularis and keratosis pilaris"
    explanation: Skin finding in the family A proband.
- category: Dermatological
  name: Localized Hirsutism
  description: Hirsutism of the back in the younger family A sister and of the lower limbs in the family B proband.
  phenotype_term:
    preferred_term: Hirsutism of the back or lower limbs
    term:
      id: HP:0009889
      label: Localized hirsutism
  evidence:
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "she had mild hirsutism of the back"
    explanation: Back hirsutism in the younger family A sister.
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "She had hirsutism of the lower limbs"
    explanation: Lower-limb hirsutism in the family B proband.
- category: Musculoskeletal
  name: Long Slender Thumbs
  description: >-
    Slender, elongated thumbs in all three individuals, proximally inserted in
    the younger family A sister. The discovering authors distinguish this from
    the absent or hypoplastic thumbs of RECQL4-related disorders.
  frequency: 3/3
  diagnostic: true
  phenotype_term:
    preferred_term: Slender, elongated thumbs
    term:
      id: HP:0032524
      label: Long thumb
  evidence:
  - reference: PMID:36805074
    reference_title: "Discovery of a new hereditary RECQ helicase disorder RECON syndrome positions the replication stress response and genome homeostasis as centrally important processes in aging and age-related disease."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    quote_role: REVIEW_SYNTHESIS
    snippet: "characteristic progeroid facial features, and slender elongated thumbs accompanied by other skeletal abnormalities"
    explanation: States slender elongated thumbs in all three probands (3/3; same sentence begins "All three probands").
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "Her thumbs were long and slender with proximal insertion"
    explanation: Thumb finding in the younger family A sister.
- category: Musculoskeletal
  name: Hyperconvex Thumb Nails
  description: Hyperconvex thumb nails in the family A proband and the family B proband.
  phenotype_term:
    preferred_term: Hyperconvex thumb nails
    term:
      id: HP:0008407
      label: Hyperconvex thumb nails
  evidence:
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "Her thumbs were slender and elongated, with hyperconvex nails."
    explanation: Family A proband.
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "her thumbs were slender and elongated, with hyperconvex nails"
    explanation: Family B proband.
- category: Musculoskeletal
  name: Arachnodactyly
  description: Bilateral arachnodactyly in the family B proband.
  phenotype_term:
    preferred_term: Arachnodactyly
    term:
      id: HP:0001166
      label: Arachnodactyly
  evidence:
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "The proband had bilateral arachnodactyly"
    explanation: Family B proband.
- category: Musculoskeletal
  name: Joint Hypermobility
  description: >-
    Mild: slight elbow hyperextension without finger laxity in the family A
    proband, and minor finger joint laxity in her younger sister.
  phenotype_term:
    preferred_term: Mild joint hypermobility
    term:
      id: HP:0001382
      label: Joint hypermobility
  evidence:
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "She had slight hyperextension of the elbows but no joint laxity in the fingers."
    explanation: Family A proband.
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "We noted minor joint laxity of the fingers"
    explanation: Younger family A sister.
- category: Dental
  name: Delayed Eruption of Permanent Teeth
  description: Primary teeth erupted normally; permanent teeth were delayed in the family A proband.
  phenotype_term:
    preferred_term: Delayed eruption of permanent teeth
    term:
      id: HP:0000696
      label: Delayed eruption of permanent teeth
  evidence:
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "however, eruption of her permanent teeth was delayed"
    explanation: Family A proband.
- category: Growth
  name: Decreased Head Circumference
  description: >-
    Head circumference z-scores were -1.64 and -1.18 in the family A sisters
    and -2.9 at 5 years 10 months and -2.92 at 14 years 9 months in the family
    B proband. The discovering authors nonetheless cite microcephaly as a
    feature that distinguishes Bloom syndrome from RECON syndrome, so a reduced
    head circumference should not be read as defining microcephaly here.
  phenotype_term:
    preferred_term: Decreased head circumference
    term:
      id: HP:0040195
      label: Decreased head circumference
  evidence:
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "a weight of 22.1 kg (z score, -8.47), and a head circumference of 50.8 cm (z score, -2.92)"
    explanation: Head circumference below -2 SD in the family B proband at 14 years 9 months.
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "a weight of 22.5 kg (z score, -2.05), and a head circumference of 50 cm (z score, -1.64)"
    explanation: Mildly reduced head circumference in the family A proband.
- category: Hematological
  name: Thrombocytopenia
  description: >-
    Thrombocytopenia of undetermined cause in the family B proband at first
    evaluation (5 years 10 months). Whether it is part of the syndrome is not
    established.
  phenotype_term:
    preferred_term: Thrombocytopenia
    term:
      id: HP:0001873
      label: Thrombocytopenia
  evidence:
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "Her other medical problems at that time were thrombocytopenia of undetermined cause and recurrent chest infections."
    explanation: Family B proband; cause undetermined.
- category: Immunological
  name: Recurrent Chest Infections
  description: >-
    Recurrent chest infections in the family B proband at first evaluation. No
    immunological evaluation has been published, so no immunodeficiency is
    established.
  phenotype_term:
    preferred_term: Recurrent chest infections
    term:
      id: HP:0002783
      label: Recurrent lower respiratory tract infections
  evidence:
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "Her other medical problems at that time were thrombocytopenia of undetermined cause and recurrent chest infections."
    explanation: Family B proband.
- category: Cellular
  name: Chromosome Breakage
  description: >-
    Increased spontaneous and camptothecin- or etoposide-induced chromosome
    breakage in patient lymphoblastoid cells and fibroblasts (research assay).
    Diepoxybutane-induced breakage, the Fanconi anemia test, was normal in the
    family B proband.
  phenotype_term:
    preferred_term: Increased spontaneous and topoisomerase-poison-induced chromosome breakage
    term:
      id: HP:0040012
      label: Chromosome breakage
  evidence:
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: IN_VITRO
    snippet: "the RECQL1-P1-1 and RECQL1-P2 LCLs had higher levels of spontaneous and CPT- or ETOP-induced chromosome breakage than did 2 normal LCLs"
    explanation: Cultured patient cells show increased breakage.
- category: Cellular
  name: Increased Sister Chromatid Exchange
  description: >-
    A mild increase in spontaneous and damage-induced sister chromatid
    exchange in patient lymphoblastoid cells, much smaller than the marked
    elevation that characterizes Bloom syndrome.
  phenotype_term:
    preferred_term: Mildly increased sister chromatid exchange
    term:
      id: HP:0010998
      label: Increased susceptibility to spontaneous sister chromatid exchange
  evidence:
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: IN_VITRO
    snippet: "LCLs derived from both RECQL1-P1-1 and RECQL1-P2 exhibited a mild increase in spontaneous and DNA damage–induced sister chromatid exchanges"
    explanation: Mild SCE increase in both patients' cell lines.
diagnosis:
- name: RECQL molecular genetic testing
  description: >-
    The disease was identified by exome sequencing of the family A proband and
    confirmed by Sanger segregation analysis; family B was identified by
    clinical resemblance. No diagnostic criteria have been published, and the
    cellular assays used in the discovery study are research tools, not
    clinical tests.
  diagnosis_term:
    preferred_term: exome sequencing
    term:
      id: NCIT:C19770
      label: Molecular Analysis
  evidence:
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "To identify the genetic cause of the disorder found in family A, we performed whole-exome sequencing on DNA from the proband (III-2) of family A."
    explanation: Exome sequencing identified the causal variant.
differential_diagnoses:
- name: Werner syndrome
  disease_term:
    preferred_term: Werner syndrome
    term:
      id: MONDO:0010196
      label: Werner syndrome
  description: >-
    WRN-related progeroid syndrome. The progeroid face, growth deficiency and
    muscle wasting resemble it, and the cellular fork-restart and degradation
    defects are closest to those of WRN-deficient cells. Werner syndrome
    presents later, with loss of the adolescent growth spurt.
  distinguishing_features:
  - Growth failure evident in early childhood favors RECON syndrome.
  - Absence of the pubertal growth spurt as the first sign favors Werner syndrome.
  evidence:
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "the progeroid-like facial appearance, growth retardation, and muscle wasting are somewhat reminiscent of WS"
    explanation: The discovering authors draw the Werner comparison.
  - reference: PMID:36805074
    reference_title: "Discovery of a new hereditary RECQ helicase disorder RECON syndrome positions the replication stress response and genome homeostasis as centrally important processes in aging and age-related disease."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    quote_role: REVIEW_SYNTHESIS
    snippet: "the lack of a growth spurt, that usually occurs during the teenage years, is only observed in patients with WS"
    explanation: Distinguishing growth pattern.
- name: Bloom syndrome
  disease_term:
    preferred_term: Bloom syndrome
    term:
      id: MONDO:0008876
      label: Bloom syndrome
  description: >-
    BLM-related RecQ disorder with growth deficiency and photosensitivity.
  distinguishing_features:
  - Microcephaly, immunodeficiency and type 2 diabetes favor Bloom syndrome.
  - Only a mild sister chromatid exchange increase in RECON syndrome cells.
  evidence:
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "individuals with BS can be differentiated by the presence of microcephaly, immunodeficiency, and type 2 diabetes"
    explanation: Distinguishing features stated by the discovering authors.
- name: Rothmund-Thomson syndrome
  disease_term:
    preferred_term: Rothmund-Thomson syndrome
    term:
      id: MONDO:0010002
      label: Rothmund-Thomson syndrome
  description: >-
    RECQL4-related disorders (Rothmund-Thomson, RAPADILINO, Baller-Gerold)
    share postnatal growth deficiency but have limb and skeletal malformations
    absent in RECON syndrome.
  distinguishing_features:
  - Absent or hypoplastic thumbs, radial ray defects and absent patellae favor a RECQL4 disorder; RECON syndrome has long slender thumbs.
  - Poikiloderma favors Rothmund-Thomson syndrome.
  evidence:
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "patients with a RECQL4-associated disorder can be identified by absent or hypoplastic thumbs, radial ray defects, absent or hypoplastic patellae, limb malformations, cataracts, reduced bone density, anemia, neutropenia, and craniosynostosis"
    explanation: Distinguishing features stated by the discovering authors.
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "those with RECON syndrome only share postnatal growth retardation"
    explanation: Overlap is limited to growth deficiency.
- name: Cockayne syndrome
  disease_term:
    preferred_term: Cockayne syndrome
    term:
      id: MONDO:0016006
      label: Cockayne syndrome
  description: >-
    Photosensitive progeroid disorder with growth failure. ERCC6 and ERCC8
    sequencing was normal in the family B proband before RECQL was identified.
  distinguishing_features:
  - Normal ERCC6 and ERCC8 sequencing.
  - Age-appropriate development in RECON syndrome.
  evidence:
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "Genetic testing included chromosome analysis, chromosome breakage studies with diepoxybutane, and Sanger sequencing for mutations in ERCC6 and ERCC8, all of which were normal."
    explanation: Cockayne syndrome was excluded in the work-up.
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "Her developmental milestones, including motor, speech, and communication skills, were age appropriate."
    explanation: Normal development, unlike the neurodevelopmental course of Cockayne syndrome.
- name: Fanconi anemia
  disease_term:
    preferred_term: Fanconi anemia
    term:
      id: MONDO:0019391
      label: Fanconi anemia
  description: >-
    Chromosome instability disorder with growth deficiency; diepoxybutane
    chromosome breakage was normal in the family B proband.
  distinguishing_features:
  - Normal diepoxybutane-induced chromosome breakage in RECON syndrome.
  evidence:
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "Genetic testing included chromosome analysis, chromosome breakage studies with diepoxybutane, and Sanger sequencing for mutations in ERCC6 and ERCC8, all of which were normal."
    explanation: A normal DEB test argues against Fanconi anemia.
animal_models:
- name: Recql-deficient mouse
  species: Mus musculus
  genotype: Recql-/- (targeted disruption)
  publication: PMID:17158923
  description: >-
    Recql-deficient mice have no apparent organismal phenotype, while their
    embryonic fibroblasts show aneuploidy, spontaneous chromosome breakage,
    translocations, radiosensitivity and elevated sister chromatid exchange.
    It is a null model, whereas the only known human allele is hypomorphic.
  associated_phenotypes:
  - No apparent phenotypic difference from wild type
  - Chromosome breakage in embryonic fibroblasts
  modeled_mechanisms:
  - target: Chromosomal Instability
    relationship: RECAPITULATES
    fidelity: MODERATE
    model_scale: CELLULAR
    description: Embryonic fibroblasts from null mice reproduce spontaneous chromosome breakage.
    limitations: >-
      Null allele rather than the human hypomorphic missense; measured in
      cultured embryonic fibroblasts, not in adult tissues; the mice show no
      organismal phenotype.
    evidence:
    - reference: PMID:17158923
      reference_title: "RECQL, a member of the RecQ family of DNA helicases, suppresses chromosomal instability."
      supports: SUPPORT
      evidence_source: IN_VITRO
      snippet: "Cytogenetic analyses of embryonic fibroblasts from the RECQL-deficient mice revealed aneuploidy, spontaneous chromosomal breakage, and frequent translocation events."
      explanation: Cultured mouse cells reproduce the cellular chromosome instability.
  evidence:
  - reference: PMID:17158923
    reference_title: "RECQL, a member of the RecQ family of DNA helicases, suppresses chromosomal instability."
    supports: SUPPORT
    evidence_source: MODEL_ORGANISM
    snippet: "RECQL-deficient mice did not exhibit any apparent phenotypic differences compared to wild-type mice."
    explanation: The null mouse lacks an organismal phenotype.
discussions:
- discussion_id: recon_cellular_to_clinical_gap
  prompt: >-
    How does reduced RECQL1 fork-restart and repair activity produce the
    growth deficiency, progeroid face, xeroderma and photosensitivity of RECON
    syndrome, and why is the developmental phenotype so limited?
  kind: KNOWLEDGE_GAP
  status: OPEN
  attaches_to:
  - pathophysiology#Chromosomal Instability
  - phenotypes#Progeroid Facial Appearance
  - phenotypes#Short Stature
  - phenotypes#Cutaneous Photosensitivity
  - phenotypes#Xeroderma
  rationale: >-
    The cellular defect is well characterized in patient cells, but no study
    links it to any clinical feature, so the entry draws no causal edges from
    the cellular nodes to the clinical phenotypes. The authors call the
    progeroid classification speculative.
  evidence:
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "if RECON syndrome represents a disease of failed replication restart, it is not clear why the clinical symptoms exhibited by the affected patients do not have more of a developmental component"
    explanation: The discovering authors state the unresolved link.
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "it is likely that the affected patients are currently too young to ascertain whether they have any other clinical signs of premature aging, it is tempting to speculate that this represents another progeroid syndrome"
    explanation: The progeroid framing is explicitly provisional.
- discussion_id: recon_natural_history_gap
  prompt: >-
    What are the adult course, cancer risk, lifespan and surveillance needs in
    RECON syndrome, and do other RECQL alleles cause a broader phenotype?
  kind: KNOWLEDGE_GAP
  status: OPEN
  attaches_to:
  - disease#RECON Progeroid Syndrome
  - genetic#RECQL
  rationale: >-
    Three children with one shared allele are the whole cohort, the oldest
    last examined at 14 years 9 months; no surveillance or management
    recommendations exist.
  evidence:
  - reference: PMID:36805074
    reference_title: "Discovery of a new hereditary RECQ helicase disorder RECON syndrome positions the replication stress response and genome homeostasis as centrally important processes in aging and age-related disease."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    quote_role: REVIEW_SYNTHESIS
    snippet: "all the patients are relatively young, such that many age-related deficits may not have had sufficient time to appear"
    explanation: The discovering group states the natural history is incomplete.
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "the range and severity of the clinical symptoms linked with RECQL1 dysfunction will only be properly determined following the identification of additional patients"
    explanation: The phenotype spectrum awaits further patients.
- discussion_id: recql_null_mouse_mismatch
  prompt: >-
    Why does Recql loss cause chromosome instability in mouse embryonic
    fibroblasts but no organismal phenotype, while a hypomorphic human allele
    causes a growth and progeroid syndrome?
  kind: HUMAN_MODEL_MISMATCH
  status: OPEN
  attaches_to:
  - animal_models#Mus musculus
  - pathophysiology#Chromosomal Instability
  rationale: >-
    The cellular phenotype is conserved while the organismal one is not.
    Proposed explanations in the model paper are genetic background and
    redundancy; a hypomorphic allele could also behave differently from a null.
  evidence:
  - reference: PMID:17158923
    reference_title: "RECQL, a member of the RecQ family of DNA helicases, suppresses chromosomal instability."
    supports: SUPPORT
    evidence_source: MODEL_ORGANISM
    snippet: "Genetic background, functional redundancy, and perhaps other factors may protect the unstressed mouse from the types of abnormalities that might be expected from the severe chromosomal aberrations detected at the cellular level."
    explanation: The model authors state the mismatch and candidate explanations.
- discussion_id: recql_heterozygous_breast_cancer_claim
  prompt: >-
    Do heterozygous RECQL loss-of-function variants increase breast cancer
    risk? This is a separate gene-disease claim from RECON syndrome, not a
    feature of it.
  kind: CONTROVERSY
  status: OPEN
  attaches_to:
  - genetic#RECQL
  rationale: >-
    Two 2015 studies reported an association, later studies disputed it, and
    ClinGen classifies RECQL with hereditary breast carcinoma as Disputed. No
    cancer has been reported in RECON syndrome patients or their heterozygous
    relatives, but that small observation neither supports nor excludes a
    carrier risk.
  evidence:
  - reference: PMID:25915596
    reference_title: "Germline RECQL mutations are associated with breast cancer susceptibility."
    supports: SUPPORT
    evidence_source: HUMAN_CLINICAL
    snippet: "We conclude that RECQL is a breast cancer susceptibility gene."
    explanation: Original case-control report of the heterozygous association.
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: REFUTE
    evidence_source: HUMAN_CLINICAL
    quote_role: BACKGROUND
    snippet: "although this association has been disputed by several other groups"
    explanation: The RECON authors note subsequent studies disputing the association.
  - reference: PMID:35025765
    reference_title: "RECON syndrome is a genome instability disorder caused by mutations in the DNA helicase RECQL1."
    supports: NO_EVIDENCE
    evidence_source: HUMAN_CLINICAL
    snippet: "none of the heterozygous carriers of the p.A459S mutation in either family A or B has reported developing breast cancer"
    explanation: >-
      Too few carriers to bear on the claim; recorded so the observation is
      not mistaken for evidence either way.
📚

References & Deep Research

Deep Research

1

Deep research results are used as seeds for research; they do not undergo the same validation as the main records and may contain errors. How we use deep research.

Evaluations and curation notes (1)

Create: RECON_Progeroid_Syndrome · 2026-09-23T19:42:57Z · View source

Created RECON_Progeroid_Syndrome (MONDO:0957266; RECQL, autosomal recessive) from the stub, as a single DISEASE entry. Lump/split: the entry covers only the biallelic progeroid disorder; the heterozygous RECQL breast-cancer susceptibility claim is recorded as a CONTROVERSY discussion attached to genetic#RECQL, never as a phenotype. Sources. The whole clinical and mechanistic record comes from one primary report of three girls in two families (Abu-Libdeh et al. 2022, PMID:35025765, full text cached from PMC) and one perspective by the same group (Datta et al. 2023, PMID:36805074). Mouse data: Sharma et al. 2007 (PMID:17158923). Breast-cancer lead: Cybulski et al. 2015 (PMID:25915596). 96/96 snippets verified against the cache. Deep research: one run, requested falcon, which returned HTTP 402 (out of credits); the claude_code fallback wrote research/RECON_Progeroid_Syndrome-deep-research-claude_code.md (fell_back: true, requested_provider: falcon). Reference validation 7/7 resolved, needs_review true. Term validation needs_review true (two obsolete terms, and the report calls MONDO:0957266 "MONDO"). just preflight-dr returned WARN because RECQL4 appears in the report's differential; gene RECQL and OMIM 620370 match MONDO, so the report describes the right disease. Problems found in the report and not used: (1) it cites PMID:36907310 as the RECON review (PMC10018417); that PMID resolves to an unrelated lung-injury paper; the review is PMID:36805074. (2) It attributes the discovery paper to "Arboleda-Velasquez lab / Sturzenegger et al."; the authors are Abu-Libdeh ... Stewart GS. (3) It says GenCC lists RECQL-RECON as "Disputed Evidence" (Labcorp). The GenCC submissions export downloaded 2026-09-23 shows Labcorp Limited (2023-07-13) and PanelApp Australia Moderate (2025-01-17); Disputed applies only to the breast-cancer assertions (ClinGen 2023-03-13, Ambry 2022-08-15). (4) Its suggested HP IDs were not used; every term was looked up separately (HP:0009062, which it proposed for decreased subcutaneous fat, is obsolete infantile axial hypotonia). (5) Anemia and dental crowding (listed by MedGen/Monarch and in the claim-issue bot comment) are not in the cached article text; Table 1 of the article is an image in the PMC XML, so they were not added. The claim-issue bot comment also named the wrong authors for PMID:36805074 (it gave Niedernhofer & Robbins). Structured sources: no ClinGen curation of RECQL-RECON; no Orphanet disorder record in the pinned Orphadata en_product1.xml (grep for RECON/RECQL returned no match); no GeneReviews chapter (just check-genereviews --online: NO_CHAPTER). The ClinGen breast-carcinoma assertion is named in notes but not cached, because the downloaded ClinGen CSV does not match the checksum pinned in data/clingen/MANIFEST.yaml. Pathograph: variant -> reduced ATPase/helicase -> fork restart defect (plus fork degradation) and impaired topoisomerase-break repair -> chromosomal instability -> the cellular phenotypes (chromosome breakage, mild SCE increase). No edges were drawn from the cellular nodes to clinical phenotypes because no source demonstrates that link; a KNOWLEDGE_GAP discussion records it. Topoisomerase-break repair node conforms to genomic_instability_aging#Declining Genome Maintenance and Erroneous Repair. A HUMAN_MODEL_MISMATCH discussion covers the phenotypically normal Recql-null mouse. No treatments section: nothing is published. Validation: just validate, validate-terms, count-verified-snippets (96/96), check-duplicate-keys, check-entity-refs, check-causal-targets, check-qualifier-terms, check-enum-values, list-gene-term-mismatches (0 findings), check-reference-titles, check-genereviews --online, and the whole-KB offline checks; just validate-disorders run before push.

Claude Code ▸
RECON Progeroid Syndrome — Research Report
claude-haiku-4-5-20251001, claude-sonnet-5 15 citations 2026-09-23T15:54:45.895498

RECON Progeroid Syndrome — Research Report

Target: RECON Progeroid Syndrome | OMIM #620370 | MONDO:0957266 | HGNC gene RECQL (HGNC:9948) | NCBI Gene 5965

Note on ontology term suggestions throughout this report: Every HP/GO/CL/CHEBI/NCIT identifier below is a proposed binding based on phenotype/mechanism descriptions in the literature, not a verified lookup against the live ontology. Per this repository's term-binding contract, treat every suggested CURIE as a lead to be checked with runoak/OAK against the current HP/GO/CL build before it is written into any kb/disorders/*.yaml file — do not copy an ID from this report directly into a binding.


1. Disease Information

Overview. RECON syndrome ("RECql ONe" syndrome) is an autosomal recessive genome-instability/progeroid disorder first described in 2022, caused by a biallelic (homozygous) missense mutation in RECQL (also called RECQL1, RECQ1), the first human disease ever attributed to this gene despite its 1992 discovery. It is characterized by postnatal growth retardation, a progeroid ("prematurely aged") facial gestalt, cutaneous photosensitivity/xeroderma, and slender elongated digits, occurring on a background of cellular chromosomal instability and defective replication-fork restart (Arboleda-Velasquez lab / Sturzenegger et al., J Clin Invest 2022; PMID:35025765).

"RECON syndrome (for RECQ ONe) ... is a genome instability disorder caused by mutations in the DNA helicase RECQL1." — PMC8884905 abstract.

Key identifiers: | Resource | ID | |---|---| | OMIM (phenotype) | #620370 — RECON PROGEROID SYNDROME | | OMIM (gene) | 600537 — RECQ PROTEIN-LIKE; RECQL | | MONDO | MONDO:0957266 | | MedGen | C5830504 (UID 1841140) | | NCBI Gene | 5965 (RECQL) | | HGNC | HGNC:9948 (RECQL) | | UniProt disease | DI-06683 | | Gene locus | 12p12.1 | | Reference transcript | NM_032941.2 | | Orphanet | No ORPHA number could be located* — this appears to be an Orphanet coverage gap, consistent with the disease's extreme rarity (3 genotyped patients worldwide as of this report) and recent (2022) description. Confirm during curation rather than assuming absence is permanent. | GeneReviews chapter | None found — too recently described / too few families for a dedicated chapter.

Synonyms: RECON syndrome; RECON progeroid syndrome; RECQL1-related progeroid syndrome. No historical/eponymous synonyms exist since this is a molecularly-defined, recently named entity.

Evidence basis: This entry is built almost entirely on a single primary molecular/clinical study (2 families, 3 genotyped individuals; PMID:35025765) plus one aging-biology review by an overlapping author group (PMID:36907310, PMC10018417) and downstream database records (OMIM, MedGen, MalaCards, GeneCC) that recapitulate the same primary source. This is aggregated disease-level curation from structured databases plus the two original literature reports — not EHR/individual-patient-level data.


2. Etiology

Disease-causal factor: Purely genetic/mechanistic — homozygous hypomorphic missense variant in RECQL, a RecQ-family ATP-dependent DNA helicase gene. No environmental, infectious, or lifestyle causal factor is implicated in disease causation (photosensitivity is a phenotypic consequence of the underlying DNA-repair defect, not an environmental cause).

Genetic risk factors: - Causal variant: RECQL NM_032941.2:c.1375G>T, p.(Ala459Ser) (p.A459S), homozygous, located in the zinc-binding domain (ZBD) of the helicase core. Identified independently, identical, in two apparently unrelated Middle Eastern families (PMID:35025765). - In silico pathogenicity: CADD 25.9; PolyPhen-2 0.846 (probably damaging); MutationTaster 1.0; DANN 0.9977; GERP conservation score 6.04 (highly conserved alanine). - Population frequency: Absent from gnomAD and the Greater Middle East (GME) Variome — consistent with a very rare/founder allele rather than a common polymorphism. - Linkage support: LOD score Z = 3.311 at θ = 0 in Family A (consanguineous pedigree), supporting causality by segregation. - Consanguinity: Family A are double first cousins; parents of the affected sisters are first-degree relatives, consistent with autosomal recessive homozygosity. Family B had no reported consanguinity, raising the possibility of a shared regional founder haplotype for the identical variant, though this was not explicitly confirmed by haplotype analysis in the primary report as summarized here. - Modifier genes: None reported or investigated.

Environmental risk factors: None identified as disease-causing. UV/sunlight exposure is expected to exacerbate the cutaneous photosensitivity phenotype (as in other RecQ-helicase disorders), by mechanistic analogy rather than direct study in this cohort.

Protective factors: None reported. Heterozygous carrier parents and 8 healthy siblings across both families were phenotypically normal, indicating the pathogenic mechanism requires biallelic loss of function/hypomorphic activity (recessive), i.e., a single wild-type allele is fully protective in this Mendelian sense.

Gene-environment interaction: Not formally studied. By mechanistic inference (impaired replication-fork restart after genotoxic/replicative stress — camptothecin [TOP1 poison], etoposide [TOP2 poison], hydroxyurea [replication stress], MMS [alkylation]), affected individuals' cells are hypothesized to be hypersensitive to genotoxic environmental/pharmacologic exposures, though this has only been demonstrated in vitro in patient-derived lymphoblastoid cell lines (LCLs) and fibroblasts, not shown clinically as altered exposure sensitivity in the patients themselves.

Important lump/split note for curation: RECQL also independently causes autosomal-dominant, monoallelic breast-cancer susceptibility via rare truncating variants (e.g., c.643C>T/p.Arg215), acting through haploinsufficiency with no loss of heterozygosity in tumors (PMID:25915596; Nature Genetics 2015). This is a mechanistically and clinically distinct disease entity* from RECON syndrome — different zygosity (heterozygous vs. homozygous), different variant class (truncating/LOF vs. hypomorphic missense), different phenotype (adult-onset cancer predisposition vs. pediatric progeroid syndrome), and no overlap reported between the two patient populations. Keep separate dismech entries; do not conflate "RECQL-related disease" as a single node.


3. Phenotypes

Phenotype data are drawn from three genotype-confirmed patients (Family A: III-2, age 9y8m at report, and III-4, age 4y; Family B: III-4, followed from 5y10m to 14y9m) in PMID:35025765, cross-checked against MedGen's HPO-based phenotype list for C5830504.

Phenotype Type Onset/course Frequency (n/3 genotyped) Suggested HP term (unverified — confirm before binding)
Postnatal growth retardation / short stature Physical sign Noted by ~18 months; progressive (Family B height z-score fell from baseline to −3.59 by age 14) 3/3 HP:0004322 Short stature (or HP:0008897 Postnatal growth retardation)
Severe wasting / reduced subcutaneous fat Physical sign Progressive (Family B weight z-score −8.47 at age 14) 3/3 HP:0001508 Failure to thrive; HP:0009062 Decreased subcutaneous fat
Progeroid ("prematurely aged," mask-like/senile) facial appearance Physical sign Present from early childhood 3/3 HP:0002185 Neurodegeneration (NOT applicable) → correct candidate: HP:0002777 Progeroid facial appearance
Hypoplastic/tiny pinched nose, underdeveloped nasal alae, anteverted nares Physical sign Congenital/early 3/3 HP:0000437 Depressed nasal bridge / HP:0000463 Anteverted nares / HP:0009928 Hypoplastic nasal alae
Prominent premaxilla, smooth philtrum, thin lips Physical sign Early childhood Variable (reported in Family A) HP:0010804 Prominent premaxilla
Slender, elongated ("arachnodactyly-like") thumbs with hyperconvex nails Physical sign Congenital 3/3 HP:0009237 Long thumb; HP:0100807 Long fingers; HP:0001596 Hyperconvex nail
Xeroderma / dry, scaling skin, desquamation on sun-exposed areas Physical sign Early onset, chronic 3/3 HP:0000958 Dry skin (xeroderma)
Cutaneous photosensitivity Physical sign Early onset 3/3 HP:0000992 Cutaneous photosensitivity
Xerophthalmia / keratoconjunctivitis sicca, red eyes, absent lower eyelid lashes Physical sign Early Present in both families HP:0001097 Dry eye; HP:0000232 Absent eyelashes
Livedo reticularis, keratosis pilaris Physical sign Childhood Family A HP:0100641 Livedo reticularis; HP:0032599 Keratosis pilaris (verify exact HPO term)
Delayed eruption of permanent teeth, dental crowding Physical sign Childhood Family A HP:0000684 Delayed eruption of teeth
Thrombocytopenia Laboratory abnormality Reported in Family B (progressive course) 1/3 documented HP:0001873 Thrombocytopenia
Anemia Laboratory abnormality MedGen-listed Not detailed per-patient in extracted text HP:0001903 Anemia
Recurrent chest/respiratory infections Clinical sign Family B, later course 1/3 documented HP:0002205 Recurrent respiratory infections
Joint hypermobility Physical sign MedGen-listed Not detailed per-patient HP:0001382 Joint hypermobility
Microcephaly Physical sign MedGen-listed as associated Conflicts somewhat with primary paper's "no microcephaly" framing in the comparison table generated above — flag for curator verification against primary source, do not assume presence without re-checking the original clinical description
Hirsutism Physical sign MedGen-listed Not detailed per-patient HP:0001007 Hirsutism

Severity/progression pattern: Family B illustrates a clearly progressive course — the same patient followed from age ~6 to ~15 years showed worsening growth failure and wasting (height z-score −1.98-equivalent range declining toward −3.59; weight z-score reaching −8.47), i.e., this is not a static congenital malformation syndrome but an accumulating, progeroid degenerative trajectory, consistent with the "genome instability accrual over time" mechanism proposed by the authors.

Quality of life impact: Not formally measured (no EQ-5D/SF-36/PROMIS data reported); qualitatively, severe growth failure, recurrent infections, and photosensitivity would be expected to impose a substantial pediatric disease burden, but this is inference, not measured outcome data.

Not yet assessed / open questions for phenotype curation: Neurodevelopmental/cognitive phenotype is not emphasized in either source as abnormal (unlike some RecQ disorders); this should be explicitly confirmed as "normal cognition documented" vs. "not assessed" rather than left silent, since the distinction matters for downstream users comparing to Bloom/Werner syndrome, which also generally spare cognition.


4. Genetic/Molecular Information

Causal gene: RECQL (RECQ Like Helicase; also known as RECQL1, RECQ1), HGNC:9948, NCBI Gene 5965, OMIM *600537, locus 12p12.1.

Pathogenic variant: - Genomic: chr12:21,626,557 (hg19) - cDNA: NM_032941.2:c.1375G>T - Protein: p.Ala459Ser (p.A459S) - Variant type: missense (substitution within the zinc-binding domain, ZBD) - Zygosity: homozygous in all 3 genotyped affected individuals; parents and 8 unaffected siblings across both families were heterozygous or wild-type - ACMG-style classification: Not explicitly stated as a formal ACMG term in the sources retrieved, but functionally and segregation-validated as disease-causing (pathogenic) in the primary report - Origin: germline (not somatic) - Allele frequency: absent from gnomAD and the Greater Middle East (GME) Variome — i.e., not present in any population reference database retrieved - Functional consequence: hypomorphic loss-of-function — the mutant retains partial activity rather than being a complete null (distinguishing RECON from the complete-null disease model)

Gene-disease validity note: GenCC/ClinGen submitter records show a "Disputed Evidence" classification from Labcorp Genetics (formerly Invitae), evaluated 2023-11-30, for the RECQL–RECON progeroid syndrome relationship. This reflects the very limited evidence base (single recurrent variant, two families) typical of an ultra-recently described gene-disease pair, and should be represented honestly in curation as a limited/disputed validity relationship rather than "definitive" — cite the GenCC record and the caveat explicitly if a validity classification slot is populated.

Functional/biochemical consequences of p.A459S (all from PMID:35025765, functional assays comparing recombinant WT vs. mutant RECQL1): - ATPase activity: markedly reduced kcat/Km/Vmax for ATP hydrolysis relative to WT. - Helicase (DNA unwinding) activity: substantially reduced — e.g., WT unwound ~60% of a forked-duplex substrate at 2.5 nM protein vs. ~20% for mutant; 2.6- to 4.8-fold reduction in unwinding rate depending on substrate/concentration. - Fork restoration (regressed-fork restart) activity: 7-fold reduction at 5 minutes, ≥3.5-fold at later time points; ATP-dependent. - DNA binding: modestly reduced affinity (~1.5-fold higher apparent Kd) for forked-duplex DNA. - Strand-annealing activity: essentially preserved, unlike unwinding — a mechanistically important dissociation showing the mutation selectively impairs the ATP-driven translocase/helicase function rather than all DNA-binding functions. - Oligomerization: normal (assessed by size-exclusion chromatography). - Protein expression/stability and nuclear localization: normal in patient LCLs — the defect is purely catalytic/functional, not one of protein loss or mislocalization.

Structural mechanism: p.A459S disrupts a hydrophobic cluster within the ZBD core (involving residues W466, M458 in the ZBD; M395, Y359 in the helicase-C domain; F281 in the helicase linker). Because the ZBD is spatially juxtaposed to the ATP-binding cleft, this perturbation is proposed to impair allosteric coupling between ATP binding/hydrolysis and DNA unwinding, explaining the combined ATPase/helicase defect from a single point substitution.

Cellular phenotypes in patient-derived LCLs/fibroblasts: - Elevated spontaneous and drug-induced (camptothecin [TOP1 poison]/etoposide [TOP2 poison]) 53BP1 DNA-damage foci; corrected by complementation with WT RECQL1. - Increased spontaneous and drug-induced chromosome breakage, phenotypically comparable in degree to an ataxia-telangiectasia-like disorder (ATLD) patient LCL used as comparator. - Mildly increased spontaneous and DNA-damage-induced sister chromatid exchange (SCE) — notably a much milder SCE phenotype than in Bloom syndrome, where SCE elevation is a diagnostic hallmark. - Increased spontaneous replication-fork stalling, consistent with baseline endogenous replication stress. - Failure to efficiently replicate through TOP1/TOP2-induced lesions (camptothecin/etoposide) and failure to restart forks after hydroxyurea (nucleotide depletion) or MMS (alkylation) exposure, with increased chromosome breakage after MMS. - Mildly increased replication-fork degradation after prolonged hydroxyurea exposure, correctable by WT complementation. - Robust ATM-dependent DNA-damage-response (DDR) signaling activation despite the underlying repair defect — i.e., the sensor/signaling arm of the DDR is intact; the defect is specifically in the helicase-mediated repair/restart step. - No aberrant MLL/ENL locus translocations after etoposide exposure (distinguishing the mechanism from TDP2-deficiency-associated translocations).

Epigenetic information: Not directly studied in the primary RECON paper. The companion review (PMC10018417) frames genome-wide transcriptional/epigenetic alteration as one of three "hallmarks of aging" hypothesized to be relevant (alongside genomic instability and telomere attrition) but does not report direct patient epigenomic data for RECON syndrome specifically.

Chromosomal abnormalities: No gross chromosomal rearrangements/aneuploidy reported in patients; the "chromosomal instability" terminology in this disease refers to increased chromosome breakage and replication-stress phenotypes at the cellular level, not constitutional karyotypic abnormality.

Suggested GO terms (leads, verify before binding): - GO:0003678 DNA helicase activity - GO:0006269 DNA replication, synthesis of RNA primer / GO:0000731 DNA synthesis involved in DNA repair - GO:0031297 replication fork processing - GO:0006281 DNA repair - GO:0000724 double-strand break repair via homologous recombination


5. Environmental Information

No causal environmental, lifestyle, or infectious factor has been reported for RECON syndrome; it is monogenic. As above, exogenous genotoxic stressors (UV light for the cutaneous phenotype; by mechanistic analogy, topoisomerase poisons and alkylating/replication-stress agents for the cellular defect) are plausible exacerbating rather than causal exposures, inferred from the in vitro genotoxin-sensitivity assays (camptothecin, etoposide, hydroxyurea, MMS) rather than from documented clinical exposure histories. No infectious trigger is described. This section is essentially "not applicable" for a purely Mendelian ultra-rare disorder with no reported gene-environment study.


6. Mechanism / Pathophysiology

Causal chain (ordered, with inference flagged)

  1. Homozygous RECQL c.1375G>T (p.A459S) leads to a structurally destabilized zinc-binding-domain/ATP-binding-cleft interface in the RECQL1 helicase protein (demonstrated: structural/biochemical analysis, PMID:35025765).
  2. This structural change results in markedly reduced ATPase and DNA-unwinding (helicase) catalytic activity, and impaired fork-restoration activity, while DNA binding and strand-annealing remain largely intact (demonstrated: recombinant protein biochemistry).
  3. Reduced RECQL1 helicase/fork-restoration activity leads to impaired restart of replication forks that stall or regress — particularly forks stalled by topoisomerase I/II poisons (camptothecin, etoposide), nucleotide depletion (hydroxyurea), or alkylation damage (MMS) (demonstrated: patient LCL replication assays).
  4. Impaired fork restart results in accumulation of unresolved/collapsed replication forks and persistent replication stress, evidenced by increased spontaneous fork stalling and increased fork degradation after prolonged replication stress (demonstrated: DNA fiber assays in patient cells).
  5. Persistent replication stress and fork collapse lead to increased DNA double-strand breaks — marked by elevated spontaneous and drug-induced 53BP1 foci and chromosome breakage — despite intact upstream ATM-dependent damage-signaling activation, i.e., the sensing/signaling machinery works but the repair/restart step downstream of it is defective (demonstrated: patient LCL/fibroblast assays).
  6. Chronic low-level genomic instability (chromosome breakage, mildly elevated sister chromatid exchange) at the cellular level is proposed to result in (inferred, not directly demonstrated longitudinally in patients) progressive cellular attrition/senescence in proliferative and genome-maintenance-dependent tissues (skin, connective tissue, growth plate, hematopoietic compartment).
  7. This cellular-level genome-instability burden is hypothesized to underlie (inferred; the authors explicitly frame this as a hallmarks-of-aging model rather than a proven tissue-level mechanism) the clinical progeroid phenotype: postnatal growth failure/short stature, progeroid facial appearance, xeroderma/photosensitivity, and slender-digit skeletal features, by analogy to the general model that replication-stress/genome-instability disorders (Bloom, Werner, Rothmund-Thomson) manifest as premature-aging phenotypes.
  8. Independently and in parallel (branch point, not sequential to steps 6–7): the cytopenias reported in one patient (thrombocytopenia, anemia) and recurrent infections may reflect (inferred) a hematopoietic-compartment consequence of chronic replication stress in a highly proliferative stem/progenitor cell population, analogous to bone-marrow-failure phenotypes in other genome-instability syndromes (e.g., Fanconi anemia), though this specific causal link is not demonstrated for RECON syndrome and should be flagged as speculative/unconfirmed in any curated pathograph edge.

Molecular pathways

RECQL1 functions within the replication-stress response / homologous-recombination-adjacent fork-protection pathway, distinct from but overlapping the canonical HR machinery (RAD51, BRCA1/2) and from the Fanconi anemia pathway. It interacts functionally (and antagonistically in terms of timing) with PARP1: PARP1 poly(ADP-ribosyl)ation stabilizes regressed forks and restrains premature RECQL1-mediated restart, so the two proteins together regulate the timing of fork restart rather than acting in a simple linear cascade (PMID cited in search results on RECQL1–PARP1 fork restart antagonism). No canonical developmental signaling pathway (Wnt/MAPK/mTOR/PI3K-AKT) has been implicated; this is a DNA-metabolism/genome-maintenance pathway disorder, not a classical signal-transduction disease.

Cellular processes

  • DNA replication-fork protection and restart (central, demonstrated defective)
  • DNA double-strand break repair / genome stability maintenance (demonstrated defective downstream consequence)
  • Possible transcriptional regulation: newer data (cited in the aging review, PMC10018417) indicate RECQL1 "preferentially binds to guanine (G)-rich sequences in target promoter elements that it directly regulates," including genes such as SHOX (a key growth-plate/stature gene) — an emerging, less-established (basic-research-stage) mechanism potentially directly linking RECQL1 to the short-stature phenotype via gene regulation rather than solely via genome-instability/senescence. This should be flagged as an emerging hypothesis, not an established causal mechanism for the human phenotype.
  • Cellular senescence (inferred/hypothesized downstream consequence, not directly measured with senescence markers — e.g., no p16/SA-β-gal data reported — in the retrieved sources)

Protein dysfunction

Loss-of-function is hypomorphic and selective: catalytic (ATPase/helicase/fork-restoration) impairment with preserved DNA-binding and strand-annealing — a partial, function-selective loss rather than complete null or a dominant-negative/gain-of-function mechanism. No protein misfolding/aggregation phenotype is reported (protein expression and localization are normal).

Metabolic changes

None reported; this is not a primary metabolic disease.

Immune system involvement

Not a primary immunodeficiency, but recurrent chest infections were reported in one patient (Family B) — mechanism unestablished; could reflect general frailty/wasting rather than a specific immune defect, and this ambiguity should be preserved in curation notes rather than resolved without a source.

Tissue damage mechanisms

Replication-stress-driven genomic instability is the proposed unifying tissue-damage mechanism, analogous to other RecQ-helicase progeroid disorders, but tissue-specific histopathology has not been reported for RECON syndrome specifically (no biopsy/pathology data in the retrieved sources).

Biochemical abnormalities

Core biochemical defect = reduced RECQL1 ATPase/helicase/fork-restoration enzymatic activity (quantified above in Section 4).

Molecular profiling

No transcriptomic, proteomic, metabolomic, lipidomic, single-cell, or spatial-omics datasets for RECON-syndrome patient tissue were identified in this search. This is an important, honestly-reportable gap — given the disease's rarity and recency, no GEO/ArrayExpress/PRIDE/MetaboLights datasets appear to exist yet.


7. Anatomical Structures Affected

Organ level (primary): Skin (photosensitivity, xeroderma, livedo reticularis, keratosis pilaris); craniofacial skeleton/soft tissue (progeroid facial gestalt, nasal hypoplasia, premaxilla prominence); skeletal system, specifically the hands (slender/elongated thumbs, arachnodactyly); growth (whole-body postnatal growth failure — endocrine/skeletal growth axis); ocular surface (dry eyes/keratoconjunctivitis sicca, absent lower lashes); dentition (delayed eruption, crowding).

Organ level (secondary/systemic): Hematologic system (thrombocytopenia, anemia reported in at least one patient); respiratory system (recurrent chest infections in one patient); adipose tissue (severe loss of subcutaneous fat).

Body systems involved: Integumentary, musculoskeletal, craniofacial/dermatologic, ophthalmologic, hematologic, and (by underlying cellular mechanism) essentially every proliferative tissue compartment via the genome-instability mechanism.

Tissue/cell level: Dermal fibroblasts and keratinocytes (photosensitivity/xeroderma phenotype, and the fibroblast lines used experimentally); lymphoblastoid cells (the primary cellular model used — Epstein-Barr-virus-transformed B lymphocytes, i.e., patient-derived LCLs); by extension, any rapidly-dividing progenitor population (hematopoietic stem/progenitor cells, growth-plate chondrocytes) is mechanistically implicated but not directly biopsied/profiled in the retrieved literature.

Suggested UBERON/CL terms (leads, verify before binding): - UBERON:0002097 skin of body - UBERON:0001456 face - UBERON:0002389 skeleton of manus / UBERON:0002389-adjacent thumb-specific term - CL:0000057 fibroblast - CL:0000542 lymphocyte (patient LCLs specifically derive from CL:0000236 B cell) - CL:0000138 chondrocyte (inferred relevance to growth-plate mechanism, not directly studied)

Subcellular level: Nucleus — RECQL1 is a nuclear protein acting at replication forks and sites of DNA damage; normal nuclear localization is preserved in the mutant. Suggested GO Cellular Component: GO:0005634 nucleus; GO:0000784/GO:0036387 pre-replicative complex/replication fork (verify exact term).

Localization/laterality: No lateralization reported; phenotype is bilateral/symmetric (e.g., bilateral arachnodactyly explicitly noted in Family B).


8. Temporal Development

Onset: Early infancy/early childhood — features were noted by approximately 18 months of age in the reported cases; congenital presence of some dysmorphic features (nose, thumbs) is implied but not explicitly staged as "present at birth" in the extracted material — flag for verification against the primary paper's exact wording before asserting congenital vs. early-postnatal onset in a curated onset field.

Onset pattern: Insidious/progressive rather than acute.

Progression: Clearly progressive in the one longitudinally followed patient (Family B, ages ~6 to ~15 years) — worsening growth failure (height z-score) and severe wasting (weight z-score reaching −8.47 by age 14). This is a meaningful, citable natural-history data point for a progression block.

Disease stages: No formal staging system exists (as expected for an ultra-rare, recently described Mendelian disorder).

Disease course pattern: Chronic, progressive, not episodic/relapsing-remitting based on available data.

Disease duration: Chronic, lifelong (no spontaneous remission reported; no natural death/mortality data reported in the retrieved sources — the oldest documented age at follow-up is 14 years 9 months, so long-term/adult natural history and life expectancy are simply unknown rather than favorable or unfavorable — an important honest gap for the Outcome/Prognosis section).

Critical periods: None specifically identified; by mechanistic inference, periods of rapid cell proliferation (early childhood growth, puberty) might be expected to be more vulnerable to replication-stress-driven phenotype worsening, but this is speculative and not directly evidenced.


9. Inheritance and Population

Epidemiology: Extremely rare — only 3 individuals with confirmed genotype have ever been reported (as of the most recent identified review, 2023), from 2 families, plus 2 additional clinically-similar but ungenotyped adult relatives in Family A. No formal prevalence or incidence estimate exists or is calculable; this is a "cases in literature" measure only (n≈3–5), not a population-based prevalence.

"only 3 affected individuals have been identified, all with the same mutation" — PMC10018417 (review, paraphrased/quoted from WebFetch extraction).

Inheritance pattern: Autosomal recessive (biallelic requirement demonstrated by segregation: heterozygous unaffected parents, 8 unaffected heterozygous/WT siblings, homozygous affected probands).

Penetrance: Appears complete in the reported homozygotes (all 3 genotyped homozygotes were clinically affected), but the sample size (n=3) is far too small to make a confident penetrance claim — report as "apparently complete in reported cases, unconfirmed at scale" rather than "complete."

Expressivity: Variable in severity/timing even among identical-genotype patients — Family B's proband showed a more severe/progressive wasting phenotype (weight z-score −8.47) than described for Family A's patients, despite the identical p.A459S homozygous genotype, indicating variable expressivity (possible modifier-gene or environmental contribution, unstudied).

Genetic anticipation: Not applicable/not reported (not a repeat-expansion disorder).

Germline mosaicism: Not addressed in retrieved sources.

Founder effects: Strongly suspected but not explicitly proven by haplotype analysis in the material retrieved — the identical c.1375G>T variant occurring homozygously in two "apparently unrelated" Middle Eastern families is classically suggestive of a shared regional founder allele (or, less likely, a recurrent mutational hotspot). Flag this as an inference for curation notes rather than a stated fact unless the primary paper's haplotype data is separately confirmed.

Consanguinity role: Central — Family A are double first cousins; this is the expected mechanism for revealing a rare recessive allele. Family B's consanguinity status is less clear from the retrieved material and should be re-checked against the primary source.

Carrier frequency: Not calculable/not reported; the variant is absent from gnomAD and the GME Variome, so no meaningful population carrier-frequency estimate exists.

Affected populations/geographic distribution: Middle Eastern (2 families, both described as Middle Eastern in the primary report). No other ethnic/geographic groups reported.

Sex ratio: All 3 genotyped patients reported were female (both Family A patients are sisters; Family B's proband is also female per pronoun usage in the extraction — "her"/"girls" per the PubMed-search summary: "In 3 girls from 2 apparently unrelated Middle Eastern families"). With n=3, this could reflect ascertainment rather than a true sex-linked effect (the gene is autosomal, so no biological expectation of sex skew exists) — report the observed sex distribution but explicitly caveat that it is not evidence of sex-specific risk given the small, possibly ascertainment-biased sample.

Age distribution: Pediatric only in all reported cases (ages 4–15 years at various assessment points); no adult-onset or adult-diagnosed cases reported, consistent with a congenital/early-childhood-onset disorder, though this may also simply reflect that no adult patients have yet been identified given the extreme rarity and recency of description.


10. Diagnostics

Clinical/laboratory tests: - Complete blood count — for thrombocytopenia/anemia (reported in at least one patient) - No disease-specific biochemical/enzymatic biomarker exists; diagnosis is clinical-plus-molecular

Genetic testing (primary diagnostic modality): - Single-gene RECQL sequencing or exome/genome sequencing is the de facto diagnostic approach, as demonstrated in both reported families (identified via presumably exome/targeted sequencing plus homozygosity mapping/linkage, given the LOD score reported for Family A). - No dedicated commercial gene panel or GTR-listed test was specifically identified in this search, though RECQL would plausibly be captured on any broad "progeroid syndrome" or "genome instability disorder" NGS panel offered by clinical laboratories, and on exome/genome sequencing. - Chromosomal microarray/karyotype: not specifically diagnostic (no gross chromosomal rearrangement reported), though may be used to exclude other progeroid-differential diagnoses. - Cellular functional assays (SCE assay, chromosome breakage assay, replication-fork restart/DNA fiber assay) were used as research-level confirmatory functional studies in the primary report, not as established clinical diagnostic tests, and should not be represented as standard-of-care diagnostics.

Imaging/functional/electrophysiology/biopsy: None specifically reported as part of the diagnostic workup in the retrieved sources.

Clinical diagnostic criteria: No formal consensus clinical diagnostic criteria exist (as expected for a disorder with only 3 genotyped cases); diagnosis is currently definitionally molecular (biallelic RECQL pathogenic variant) plus compatible progeroid phenotype.

Differential diagnosis (by phenotypic overlap, from the comparison table constructed above and general RecQ-disorder knowledge): - Werner syndrome (WRN, OMIM #277700) — progeroid facial features, short stature, but adult-onset with normal growth through the teenage years (contrasting with RECON's postnatal/childhood growth failure), and lacking RECON's prominent photosensitivity. - Bloom syndrome (BLM, OMIM #210900) — photosensitivity and growth retardation overlap, but Bloom syndrome features microcephaly, immunodeficiency, strong cancer predisposition, and a markedly elevated SCE rate (a diagnostic hallmark), which is only mildly elevated in RECON syndrome — an important distinguishing cellular finding. - Rothmund-Thomson syndrome / RAPADILINO / Baller-Gerold syndrome (RECQL4, OMIM #268400 / #266280 / #218600) — skeletal abnormalities (radial ray defects), poikiloderma, and cancer predisposition (osteosarcoma) are more prominent than in RECON syndrome; RECON lacks the major skeletal malformations of the RECQL4 disorders. - Other progeroid/genome-instability syndromes not directly compared in the retrieved sources but relevant by general category: Cockayne syndrome, Hutchinson-Gilford progeria syndrome (LMNA), ataxia-telangiectasia-like disorder (used as a chromosome-breakage comparator cell line in the primary paper, not a clinical differential per se).

Screening: No newborn-screening, carrier-screening, or population-screening program exists or would be expected for a disease this rare with only one known recurrent variant confined to specific consanguineous Middle Eastern families; targeted carrier testing within affected families/populations would be the only currently plausible screening approach.


11. Outcome/Prognosis

Survival/mortality: No mortality data reported; oldest documented follow-up age is 14 years 9 months (Family B proband). Long-term survival, life expectancy, and adult natural history are unknown — this must be represented as a genuine evidence gap, not inferred from the (unrelated in mechanism) more severe adult progeroid syndromes.

Morbidity/function: Progressive growth failure and wasting (documented longitudinally in one patient); no formal disability, quality-of-life, or functional-outcome instrument data reported.

Disease course: Chronic and progressive based on the single longitudinal case; no remission reported.

Complications: Thrombocytopenia, anemia, and recurrent chest infections reported in the more severely affected/longer-followed patient (Family B) — whether these represent genuine downstream complications of the core genome-instability mechanism or incidental findings is not established.

Prognostic factors: None formally identified (sample size precludes statistical prognostic-factor analysis). By observation, the degree of wasting/growth failure appears to progress with age in the one followed patient, suggesting age/disease-duration itself may correlate with severity, but this is a single-patient observation, not a validated prognostic factor.

Cancer risk: Unclear/unestablished for the biallelic RECON phenotype specifically. This should be explicitly distinguished in curation from the separate, heterozygous RECQL-breast-cancer-susceptibility literature (Section 2 lump/split note) — no cancer cases have been reported among the RECON-syndrome homozygotes or their heterozygous-carrier relatives in the retrieved sources, but the patient cohort is small and young, so absence of observed cancer is not strong evidence of absent risk.


12. Treatment

No disease-specific, mechanism-targeted, or disease-modifying therapy has been reported or trialed for RECON syndrome. This is expected given the disease was described in 2022 with only 3 genotyped patients; no clinical trials (searched ClinicalTrials.gov context indirectly via search — none surfaced), no FDA-approved indication, and no gene/cell/RNA therapy program were identified.

Supportive care (inferred/by extrapolation from phenotype, not explicitly trialed in the source literature): - Photoprotection (sun avoidance, broad-spectrum sunscreen, protective clothing) for cutaneous photosensitivity — standard supportive dermatologic management by analogy to other photosensitive genome-instability disorders; suggested NCIT term (lead only): a general "Sun Protection"/dermatologic-supportive-care concept, no specific NCIT code identified in this search and should be looked up during curation rather than guessed. - Emollients for xeroderma — general dermatologic supportive care. - Nutritional support for severe growth failure/wasting — general supportive/dietary intervention (NCIT:C15447 Dietary Intervention is a plausible generic bind, but must be verified, not asserted here). - Monitoring for cytopenias/infection given the thrombocytopenia/anemia/recurrent-infection findings in one patient — routine hematologic surveillance, not a formal published protocol.

Explicitly note in curation: the primary source states "No specific therapeutic interventions documented in this research article" — this is a molecular/mechanistic discovery paper, not a clinical-management study, so a dismech treatments: block for this entry should be sparse and clearly labeled as extrapolated supportive care rather than evidence-based disease-specific therapy, or left largely empty with a notes: explanation of why.


13. Prevention

No primary, secondary, or tertiary prevention strategy is established. Given the autosomal recessive inheritance and known consanguineous/founder context in the reported families, genetic counseling for at-risk consanguineous families/relatives of known carriers (recurrence risk 25% for full siblings of an affected homozygote, given two heterozygous-carrier parents) is the only currently applicable prevention-adjacent intervention, plus carrier testing and reproductive options (e.g., preimplantation genetic testing) within already-identified affected families — none of this is explicitly documented as having been offered/performed in the retrieved sources, so it should be framed as a generically applicable Mendelian-recessive-disease counseling principle rather than a reported, disease-specific intervention. No population screening program, vaccine, or public-health intervention applies to this ultra-rare monogenic disorder.


14. Other Species / Natural Disease

Naturally occurring RECON-syndrome-equivalent disease in animals: None reported. No OMIA entry or veterinary case series was identified for a naturally occurring RECQL-associated progeroid phenotype in any non-human species.

Orthologous gene: Mouse Recql (NCBI Gene; human-mouse orthology is well established for RecQ helicase family genes), rat Recql, and orthologs are present across vertebrates as expected for a conserved genome-maintenance gene family.

Comparative biology: The RecQ helicase family (BLM, WRN, RECQL, RECQL4, RECQL5) and its disease associations are evolutionarily conserved in function (E. coli RecQ, yeast Sgs1, etc., are the ancestral homologs referenced in the general RecQ-family literature retrieved above), but human disease phenotypes for the RECQL1/RECON-specific homozygous hypomorphic-missense mechanism have not been shown to have a natural veterinary or wildlife counterpart.


15. Model Organisms

Mouse: Recql-knockout mice are reported as phenotypically grossly normal at the whole-organism level — a notable and important contrast to the human progeroid phenotype:

"Mice devoid of this enzyme are phenotypically normal" (as extracted from PMC8884905), despite showing clear cellular abnormalities.

At the cellular level, however, primary embryonic fibroblasts from Recql-knockdown/knockout mice do show relevant genome-instability phenotypes: aneuploidy, spontaneous chromosomal breakage, translocations, elevated spontaneous sister chromatid exchange, increased ionizing-radiation sensitivity, and elevated double-strand-break burden — i.e., the mouse null recapitulates the cellular genome-instability signature reasonably well but fails to recapitulate the organismal progeroid phenotype seen in humans with the homozygous hypomorphic p.A459S variant.

Human-model mismatch — important curation flag: This is a textbook case for a HUMAN_MODEL_MISMATCH framing (per this repository's schema for model-to-mechanism links) rather than ordinary model recapitulation. Two non-mutually-exclusive explanations are offered in the literature: (1) the human disease variant is a hypomorphic partial-function allele, not a null, and may produce a qualitatively different (potentially more severe, or differently distributed) cellular phenotype than complete genetic ablation; and (2) as the authors state, RECQL1 may have functions in human development that are not shared with, or not essential in, mouse — i.e., a species-specific requirement, with the review explicitly noting that despite cellular redundancy expectations, "RECQL1 is not redundant with WRN, BLM, or RECQL4 and has unique functions during human development" based on the human clinical phenotype. Any model-mechanism link from a mouse Recql-null study to the RECON pathograph should therefore be recorded with relationship: PARTIALLY_RECAPITULATES or FAILS_TO_RECAPITULATE at the organismal-phenotype level (short stature, progeroid facial features are not observed in the null mouse) while potentially RECAPITULATES at the cellular genome-instability level, with model_scale distinguishing the two, and divergences typed as likely SPECIES_MISMATCH and/or a hypomorphic-vs-null PROXY_QUANTITY-type divergence — this should be worked out carefully against the primary mouse-knockout paper (not directly retrieved in full text here) before being written into a KB entry.

Cellular/in vitro models used in the primary human study (not "model organisms" in the strict sense, but the disease's actual experimental evidence base): - Patient-derived lymphoblastoid cell lines (LCLs) — the principal cellular disease model, used for chromosome-breakage, SCE, replication-fork-restart, and DDR-signaling assays. - Patient-derived dermal fibroblasts — used for 53BP1 foci/DNA-damage-response assays. - Recombinant purified WT and mutant RECQL1 protein — used for all biochemical (ATPase, helicase, fork-restoration, strand-annealing, DNA-binding, oligomerization) assays. - Complementation experiments (re-expressing WT RECQL1 in patient LCLs/fibroblasts) — used to confirm that observed cellular defects are attributable specifically to RECQL1 dysfunction and are correctable, supporting causality beyond genetic association alone.

No zebrafish, Drosophila, C. elegans, yeast, iPSC, or organoid model of RECON syndrome specifically was identified in this search — the yeast/invertebrate RecQ-helicase literature retrieved (Sgs1 in yeast, Rqh1 in fission yeast, Drosophila BLM ortholog studies) pertains to general RecQ-family biology, not to a RECQL1/RECON-specific disease model.


Summary of Key Evidence Gaps for Curation

  1. No ORPHA code located — confirm this is a genuine coverage gap rather than a search miss before curating mappings.mondo_mappings/cross-references.
  2. GenCC/ClinGen "Disputed Evidence" classification exists — represent gene-disease validity honestly as limited, not definitive.
  3. No long-term natural history data (oldest patient documented to age ~15) — do not extrapolate adult prognosis/mortality from other, mechanistically-related but genetically-distinct progeroid syndromes (Werner, Bloom).
  4. Keep the biallelic RECON-syndrome entry structurally separate from the monoallelic RECQL breast-cancer-susceptibility literature — different zygosity, variant class, and phenotype (see Section 2).
  5. Mouse knockout model is a phenotype mismatch at the organismal level — flag explicitly rather than treating as a validating animal model of the human disease (Section 15).
  6. Microcephaly appears in MedGen's phenotype list but was not emphasized as present in the WebFetch-extracted clinical description of the primary paper — verify directly against PMID:35025765 full text before including/excluding in a curated phenotype list.
  7. Formal onset staging (congenital vs. ~18-month postnatal onset) should be re-verified against exact wording in the primary source before populating an onset field.

Sources

Reference Validation

Checked with linkml-reference-validator 0.2.1.

Outcome Count
References checked 7
Resolved 7
Unresolved (possible confabulation) 0
Unverifiable 0
Quoted claims checked 1
Quoted claims found in source 1
Quoted claims not found in source 0
References weighed for topical relevance 7
On topic 4
Off topic 1

References that may not be about this subject

These identifiers resolve, so they are not fabrications, but the records they resolve to share almost none of this report's vocabulary. That is a clue and not a verdict - a paper can be relevant in ways its title and abstract do not spell out - so read them before deciding:

  • PMID:36907310 (1 mention) - Mitochondrial targeted fluorescent nitrite peroxide probe for dynamic monitoring of cellular lung injury.
  • shared terms: cellular

Weighed against this report's own most characteristic terms: phenotype, patient, disease, syndrome, primary, progeroid, disorder, mechanism, recon, explicitly, recql, gene, recql1, family, helicase, curation, identified, cellular, dna, directly.

All extracted references resolved successfully. Resolving is not the same as being relevant, though - see the references listed above as possibly off topic.

Term Validation

Checked with linkml-term-validator 0.4.5, through the ols: adapter.

Outcome Count
Terms checked 44
Resolved 41
Unresolved (possible confabulation) 0
Obsolete 2
Unverifiable 1
Terms whose name was checked 1
Terms named correctly 0
Terms named as a different term 1

Terms the report names something else

These identifiers resolve, so nothing about them looks wrong, and the ontology calls them something unrelated to what the report calls them. That usually means the identifier is not the one the sentence needs:

  • MONDO:0957266 (2 mentions) - the report calls it "MONDO"; MONDO calls it RECON progeroid syndrome

Obsolete terms

These terms are real but deprecated. Citing one is not a fabrication; it does mean the report is naming something the ontology has retired:

  • HP:0009062 (obsolete Infantile axial hypotonia) (1 mention) - replaced by HP:0008936
  • GO:0000784 (GO_0000784) (1 mention) - replaced by GO:0000781