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3
Pathophys.
3
Phenotypes
4
Pathograph
1
Medical Actions

Pathophysiology

3
Inhalation and Intracellular Replication in Alveolar Macrophages
Q fever follows inhalation of aerosolized Coxiella burnetii, which is an obligate intracellular bacterium that replicates within alveolar macrophages in a lysosome-derived replicative vacuole. This intracellular lifestyle is the basis for the requirement for cell-penetrant antibiotics, because beta-lactams cannot reach the cytoplasmic organism.
alveolar macrophage CL:0000583
symbiont entry into host cell GO:0046718 biological process involved in interaction with host GO:0051701
Show evidence (2 references)
PMID:42075771 SUPPORT Other
"C. burnetii (Cb) is an obligate intracellular bacterial pathogen that replicates within alveolar macrophages following aerosol infection."
Establishes Coxiella burnetii as an obligate intracellular pathogen replicating in alveolar macrophages after aerosol infection. Evidence source is OTHER as this is a review article.
PMID:12762362 SUPPORT Other
"This spore-forming microorganism is a small gram-negative coccobacillus that is an obligate intracellular parasite."
Confirms C. burnetii as an obligate intracellular parasite, the basis for the intracellular-niche conformance. Evidence source is OTHER as this is a review article.
Acute Q Fever (Pneumonia and Hepatitis)
Acute Q fever manifests as one of three syndromes: a nonspecific febrile illness, pneumonia (which can range from mild to severe requiring ventilation, classically with multiple round opacities on chest radiography), or hepatitis.
inflammatory response GO:0006954 ↑ INCREASED
Show evidence (1 reference)
PMID:12762362 SUPPORT Other
"There are three distinct clinical syndromes of the acute form of the illness: nonspecific febrile illness, pneumonia, and hepatitis."
Documents the three acute Q fever syndromes (febrile illness, pneumonia, hepatitis). Evidence source is OTHER as this is a review article.
Coxiella Ribosomal Translation (Tetracycline Target)
C. burnetii depends on its bacterial ribosome for protein synthesis. Doxycycline, a tetracycline, binds the 30S ribosomal subunit and arrests bacterial protein synthesis; this ribosomal target — combined with doxycycline's intracellular penetration — is why a tetracycline rather than a beta-lactam is first-line.
translation GO:0006412
Show evidence (1 reference)
PMID:24336183 SUPPORT Other
"The ribosome is one of the main antibiotic targets in the bacterial cell."
Establishes the bacterial ribosome as the target of tetracyclines and other protein-synthesis inhibitors, the step this node represents. Evidence source is OTHER as this is a review article.

Pathograph

Use the checkboxes to hide or show graph categories. Hover nodes for evidence and cross-linked metadata.
Pathograph: causal mechanism network for Q Fever Interactive directed graph showing how pathophysiology mechanisms, phenotypes, genetic factors and variants, experimental models, environmental triggers, and treatments relate through causal and linked edges.

Phenotypes

3
Digestive 1
Hepatitis Hepatitis HP:0012115
Show evidence (1 reference)
PMID:12762362 SUPPORT Other
"There are three distinct clinical syndromes of the acute form of the illness: nonspecific febrile illness, pneumonia, and hepatitis."
Hepatitis is one of the three acute Q fever syndromes. Evidence source is OTHER as this is a review article.
Immune 1
Pneumonia Pneumonia HP:0002090
Show evidence (1 reference)
PMID:12762362 SUPPORT Other
"There are three distinct clinical syndromes of the acute form of the illness: nonspecific febrile illness, pneumonia, and hepatitis."
Pneumonia is one of the three acute Q fever syndromes. Evidence source is OTHER as this is a review article.
Metabolism 1
Fever Fever HP:0001945
Show evidence (1 reference)
PMID:12762362 SUPPORT Other
"There are three distinct clinical syndromes of the acute form of the illness: nonspecific febrile illness, pneumonia, and hepatitis."
Nonspecific febrile illness is one of the three acute Q fever syndromes. Evidence source is OTHER as this is a review article.
💊

Medical Actions

1
Doxycycline
Action: Pharmacotherapy NCIT:C15986
Agent: doxycycline CHEBI:50845
Tetracycline antibiotic that accumulates intracellularly and inhibits bacterial protein synthesis at the 30S ribosome; the preferred treatment for Q fever because it reaches the intracellular organism. A fluoroquinolone is an alternative; macrolide susceptibility is variable.
Mechanism Target:
INHIBITS Coxiella Ribosomal Translation (Tetracycline Target) — Doxycycline binds the 30S ribosome and arrests C. burnetii protein synthesis, the molecular target that makes a tetracycline first-line.
INHIBITS Inhalation and Intracellular Replication in Alveolar Macrophages — Doxycycline accumulates intracellularly and so reaches the cytoplasmic organism that beta-lactams cannot.
Show evidence (1 reference)
PMID:12762362 SUPPORT Other
"Treatment with doxycycline or a fluoroquinolone is preferred."
Identifies doxycycline (or a fluoroquinolone) as the preferred treatment for Q fever. Evidence source is OTHER as this is a review article.
{ }

Source YAML

click to show
name: Q Fever
creation_date: "2026-06-28T00:00:00Z"
description: >
  Q fever is a zoonotic infection caused by Coxiella burnetii, an obligate
  intracellular Gram-negative bacterium that replicates within alveolar macrophages
  after inhalation of contaminated aerosols (the reservoir is livestock, with high
  organism concentrations in the placenta of infected animals). Acute Q fever
  presents as one of three syndromes — nonspecific febrile illness, pneumonia, or
  hepatitis — while chronic Q fever is most often endocarditis. Because the
  organism is intracellular, treatment requires cell-penetrant antibiotics;
  doxycycline (a tetracycline acting on the bacterial ribosome) or a fluoroquinolone
  is preferred, and beta-lactams are ineffective.
category: Infectious Disease
parents:
- Bacterial Respiratory Infection
synonyms:
- Coxiella burnetii infection
- Coxiellosis
disease_term:
  preferred_term: Q fever
  term:
    id: MONDO:0019186
    label: Q fever
pathophysiology:
- name: Inhalation and Intracellular Replication in Alveolar Macrophages
  role: trigger
  conforms_to: "intracellular_pathogen_persistence#Intracellular Niche and Beta-Lactam Exclusion"
  description: >
    Q fever follows inhalation of aerosolized Coxiella burnetii, which is an
    obligate intracellular bacterium that replicates within alveolar macrophages in
    a lysosome-derived replicative vacuole. This intracellular lifestyle is the
    basis for the requirement for cell-penetrant antibiotics, because beta-lactams
    cannot reach the cytoplasmic organism.
  cell_types:
  - preferred_term: alveolar macrophage
    term:
      id: CL:0000583
      label: alveolar macrophage
  biological_processes:
  - preferred_term: symbiont entry into host cell
    term:
      id: GO:0046718
      label: symbiont entry into host cell
  - preferred_term: biological process involved in interaction with host
    term:
      id: GO:0051701
      label: biological process involved in interaction with host
  evidence:
  - reference: PMID:42075771
    supports: SUPPORT
    evidence_source: OTHER
    snippet: >-
      C. burnetii (Cb) is an obligate intracellular bacterial pathogen that
      replicates within alveolar macrophages following aerosol infection.
    explanation: >-
      Establishes Coxiella burnetii as an obligate intracellular pathogen
      replicating in alveolar macrophages after aerosol infection. Evidence source
      is OTHER as this is a review article.
  - reference: PMID:12762362
    supports: SUPPORT
    evidence_source: OTHER
    snippet: >-
      This spore-forming microorganism is a small gram-negative coccobacillus that
      is an obligate intracellular parasite.
    explanation: >-
      Confirms C. burnetii as an obligate intracellular parasite, the basis for the
      intracellular-niche conformance. Evidence source is OTHER as this is a review
      article.
  downstream:
  - target: Acute Q Fever (Pneumonia and Hepatitis)
    description: >-
      Intracellular replication produces the acute febrile, pneumonic, and hepatic
      syndromes.
  - target: Coxiella Ribosomal Translation (Tetracycline Target)
    description: >-
      The organism's ribosome is the molecular target of tetracycline therapy.

- name: Acute Q Fever (Pneumonia and Hepatitis)
  role: consequence
  description: >
    Acute Q fever manifests as one of three syndromes: a nonspecific febrile
    illness, pneumonia (which can range from mild to severe requiring ventilation,
    classically with multiple round opacities on chest radiography), or hepatitis.
  biological_processes:
  - preferred_term: inflammatory response
    term:
      id: GO:0006954
      label: inflammatory response
    modifier: INCREASED
  locations:
  - preferred_term: lung
    term:
      id: UBERON:0002048
      label: lung
  evidence:
  - reference: PMID:12762362
    supports: SUPPORT
    evidence_source: OTHER
    snippet: >-
      There are three distinct clinical syndromes of the acute form of the illness:
      nonspecific febrile illness, pneumonia, and hepatitis.
    explanation: >-
      Documents the three acute Q fever syndromes (febrile illness, pneumonia,
      hepatitis). Evidence source is OTHER as this is a review article.
  downstream: []

- name: Coxiella Ribosomal Translation (Tetracycline Target)
  role: therapeutic_vulnerability
  conforms_to: "bacterial_protein_synthesis_inhibition#Bacterial mRNA Translation by the Ribosome"
  description: >
    C. burnetii depends on its bacterial ribosome for protein synthesis. Doxycycline,
    a tetracycline, binds the 30S ribosomal subunit and arrests bacterial protein
    synthesis; this ribosomal target — combined with doxycycline's intracellular
    penetration — is why a tetracycline rather than a beta-lactam is first-line.
  biological_processes:
  - preferred_term: translation
    term:
      id: GO:0006412
      label: translation
  evidence:
  - reference: PMID:24336183
    supports: SUPPORT
    evidence_source: OTHER
    snippet: >-
      The ribosome is one of the main antibiotic targets in the bacterial cell.
    explanation: >-
      Establishes the bacterial ribosome as the target of tetracyclines and other
      protein-synthesis inhibitors, the step this node represents. Evidence source
      is OTHER as this is a review article.
  downstream: []
phenotypes:
- category: Respiratory
  name: Pneumonia
  description: >
    Pneumonia is one of the three acute Q fever syndromes, ranging from mild to
    severe.
  phenotype_term:
    preferred_term: Pneumonia
    term:
      id: HP:0002090
      label: Pneumonia
  evidence:
  - reference: PMID:12762362
    supports: SUPPORT
    evidence_source: OTHER
    snippet: >-
      There are three distinct clinical syndromes of the acute form of the illness:
      nonspecific febrile illness, pneumonia, and hepatitis.
    explanation: >-
      Pneumonia is one of the three acute Q fever syndromes. Evidence source is
      OTHER as this is a review article.
- category: Constitutional
  name: Fever
  description: >
    A nonspecific febrile illness is one of the acute Q fever presentations.
  phenotype_term:
    preferred_term: Fever
    term:
      id: HP:0001945
      label: Fever
  evidence:
  - reference: PMID:12762362
    supports: SUPPORT
    evidence_source: OTHER
    snippet: >-
      There are three distinct clinical syndromes of the acute form of the illness:
      nonspecific febrile illness, pneumonia, and hepatitis.
    explanation: >-
      Nonspecific febrile illness is one of the three acute Q fever syndromes.
      Evidence source is OTHER as this is a review article.
- category: Hepatic
  name: Hepatitis
  description: >
    Hepatitis is one of the three acute Q fever syndromes.
  phenotype_term:
    preferred_term: Hepatitis
    term:
      id: HP:0012115
      label: Hepatitis
  evidence:
  - reference: PMID:12762362
    supports: SUPPORT
    evidence_source: OTHER
    snippet: >-
      There are three distinct clinical syndromes of the acute form of the illness:
      nonspecific febrile illness, pneumonia, and hepatitis.
    explanation: >-
      Hepatitis is one of the three acute Q fever syndromes. Evidence source is
      OTHER as this is a review article.
treatments:
- name: Doxycycline
  description: >
    Tetracycline antibiotic that accumulates intracellularly and inhibits bacterial
    protein synthesis at the 30S ribosome; the preferred treatment for Q fever
    because it reaches the intracellular organism. A fluoroquinolone is an
    alternative; macrolide susceptibility is variable.
  therapeutic_modality: SMALL_MOLECULE
  treatment_term:
    preferred_term: Pharmacotherapy
    term:
      id: NCIT:C15986
      label: Pharmacotherapy
    therapeutic_agent:
    - preferred_term: doxycycline
      term:
        id: CHEBI:50845
        label: doxycycline
  target_mechanisms:
  - target: Coxiella Ribosomal Translation (Tetracycline Target)
    treatment_effect: INHIBITS
    description: >-
      Doxycycline binds the 30S ribosome and arrests C. burnetii protein synthesis,
      the molecular target that makes a tetracycline first-line.
  - target: Inhalation and Intracellular Replication in Alveolar Macrophages
    treatment_effect: INHIBITS
    description: >-
      Doxycycline accumulates intracellularly and so reaches the cytoplasmic
      organism that beta-lactams cannot.
  evidence:
  - reference: PMID:12762362
    supports: SUPPORT
    evidence_source: OTHER
    snippet: >-
      Treatment with doxycycline or a fluoroquinolone is preferred.
    explanation: >-
      Identifies doxycycline (or a fluoroquinolone) as the preferred treatment for
      Q fever. Evidence source is OTHER as this is a review article.
notes: >
  Created as part of the Respiratory Infections project. Intracellular zoonotic
  atypical pneumonia; conforms to the intracellular_pathogen_persistence module
  (intracellular niche / cell-penetrant-drug requirement) and the
  bacterial_protein_synthesis_inhibition module (tetracycline ribosomal target),
  mirroring the Murine_Typhus doxycycline pattern. Chronic Q fever (endocarditis)
  is noted in the description but not modeled in depth here. The infectious_agent
  (NCBITaxon) block was omitted at creation and Coxiella burnetii is described in
  the text.