Klippel-Feil syndrome (KFS) is a congenital axial-skeleton malformation defined by failure of segmentation of the cervical spine, producing fusion of two or more cervical vertebrae. The classic clinical triad is a short neck, low posterior hairline, and restricted neck mobility, often with scoliosis, Sprengel deformity, and cranial-base anomalies. It is an axial serial-homology disorder: the cervical vertebrae are serially repeated somite (sclerotome) derivatives, and KFS represents a failure of the somite-boundary / resegmentation program that normally separates adjacent vertebrae. Autosomal recessive KFS is caused by biallelic loss-of-function variants in MEOX1, a homeobox transcription factor with a nonredundant role in somite development and sclerotome polarity; autosomal dominant forms are caused by GDF6 and GDF3 (BMP-family) variants. KFS conforms to the axial-skeleton serial-homology module at its somite-boundary and vertebral-malsegmentation nodes.
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name: Klippel-Feil Syndrome
creation_date: "2026-06-29T00:00:00Z"
category: Mendelian
description: >-
Klippel-Feil syndrome (KFS) is a congenital axial-skeleton malformation
defined by failure of segmentation of the cervical spine, producing fusion of
two or more cervical vertebrae. The classic clinical triad is a short neck,
low posterior hairline, and restricted neck mobility, often with scoliosis,
Sprengel deformity, and cranial-base anomalies. It is an axial serial-homology
disorder: the cervical vertebrae are serially repeated somite (sclerotome)
derivatives, and KFS represents a failure of the somite-boundary / resegmentation
program that normally separates adjacent vertebrae. Autosomal recessive KFS is
caused by biallelic loss-of-function variants in MEOX1, a homeobox
transcription factor with a nonredundant role in somite development and
sclerotome polarity; autosomal dominant forms are caused by GDF6 and GDF3
(BMP-family) variants. KFS conforms to the axial-skeleton serial-homology
module at its somite-boundary and vertebral-malsegmentation nodes.
disease_term:
preferred_term: Klippel-Feil syndrome
term:
id: MONDO:0001029
label: Klippel-Feil syndrome
parents:
- Vertebral Malformation Disorders
has_subtypes:
- name: KFS1
display_name: KFS1 (GDF6-related, autosomal dominant)
subtype_term:
preferred_term: GDF6-related Klippel-Feil syndrome
term:
id: MONDO:0007306
label: Klippel-Feil syndrome 1, autosomal dominant
genes:
- preferred_term: GDF6
term:
id: hgnc:4221
label: GDF6
inheritance:
- name: Autosomal Dominant
inheritance_term:
preferred_term: Autosomal dominant inheritance
term:
id: HP:0000006
label: Autosomal dominant inheritance
description: >-
The GDF6-related dominant form. Reported alleles include a recurrent missense
change at a highly conserved residue, found with mirror movements, and an
inversion breakpoint downstream of the gene, found with carpal, tarsal and
vertebral fusions. GDF6 is expressed at the boundaries of the developing
vertebrae, carpals and tarsals, which is why the fusion phenotype of this form
extends beyond the cervical spine.
evidence:
- reference: PMID:18425797
reference_title: Mutations in GDF6 are associated with vertebral segmentation defects in Klippel-Feil syndrome.
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
quote_role: PRIMARY_RESULT
snippet: >-
Here we report mutations at the GDF6 gene locus in familial and sporadic
cases of KFS including the recurrent missense mutation of an extremely
conserved residue c.866T>C (p.Leu289Pro) in association with mirror movements
and an inversion breakpoint downstream of the gene in association with
carpal, tarsal, and vertebral fusions.
explanation: >-
Original report of GDF6 variants in familial and sporadic Klippel-Feil
syndrome, and the source of the recurrent missense allele, the mirror
movements and the downstream inversion breakpoint described in this row.
- reference: PMID:18425797
reference_title: Mutations in GDF6 are associated with vertebral segmentation defects in Klippel-Feil syndrome.
supports: SUPPORT
evidence_source: OTHER
quote_role: BACKGROUND
snippet: >-
GDF6 is expressed at the boundaries of the developing carpals, tarsals, and
vertebrae and within the adult vertebral disc.
explanation: >-
Expression at developing skeletal boundaries is why the GDF6-related form
also produces carpal and tarsal fusions. The sentence names no organism or
cohort, so no study type is graded.
- name: KFS2
display_name: KFS2 (MEOX1-related, autosomal recessive)
subtype_term:
preferred_term: MEOX1-related Klippel-Feil syndrome
term:
id: MONDO:0008958
label: Klippel-Feil syndrome 2, autosomal recessive
genes:
- preferred_term: MEOX1
term:
id: hgnc:7013
label: MEOX1
inheritance:
- name: Autosomal Recessive
inheritance_term:
preferred_term: Autosomal recessive inheritance
term:
id: HP:0000007
label: Autosomal recessive inheritance
description: >-
The MEOX1-related recessive form, and the mechanism this entry's pathograph is
built on. Biallelic truncating and frameshift MEOX1 alleles destabilise the
transcript completely, and both reported families are consanguineous.
evidence:
- reference: PMID:23290072
reference_title: "Mutations in MEOX1, encoding mesenchyme homeobox 1, cause Klippel-Feil anomaly."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
quote_role: PRIMARY_RESULT
snippet: >-
We describe a multiplex consanguineous family in which isolated KFS maps to
a single 17q21.31 locus that harbors a homozygous frameshift deletion in
MEOX1; this deletion results in complete instability of the transcript.
explanation: >-
Maps isolated Klippel-Feil syndrome to MEOX1 at 17q21.31 and shows the
frameshift allele destroys the transcript.
- reference: PMID:24073994
reference_title: Mutation in MEOX1 gene causes a recessive Klippel-Feil syndrome subtype.
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
quote_role: PRIMARY_RESULT
snippet: Here, we report a truncating mutation in the MEOX1 gene in a KFS family with an autosomal recessive trait.
explanation: >-
Independent consanguineous family confirming biallelic MEOX1 truncation as a
recessive cause, establishing this as a distinct subtype.
- name: KFS3
display_name: KFS3 (GDF3-related, autosomal dominant)
subtype_term:
preferred_term: GDF3-related Klippel-Feil syndrome
term:
id: MONDO:0013375
label: Klippel-Feil syndrome 3, autosomal dominant
genes:
- preferred_term: GDF3
term:
id: hgnc:4218
label: GDF3
inheritance:
- name: Autosomal Dominant
inheritance_term:
preferred_term: Autosomal dominant inheritance
term:
id: HP:0000006
label: Autosomal dominant inheritance
description: >-
The GDF3-related dominant form. The reported variants are pleiotropic, found
in patients with ocular as well as skeletal Klippel-Feil anomalies, and one
reported individual carried heterozygous alterations in both GDF3 and GDF6.
Inhibiting the zebrafish co-orthologue of GDF3 reproduces the patient
phenotypes.
evidence:
- reference: PMID:19864492
reference_title: Mutation of the bone morphogenetic protein GDF3 causes ocular and skeletal anomalies.
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
quote_role: PRIMARY_RESULT
snippet: >-
Multiple mis-sense variants were identified in patients with ocular and/or
skeletal (Klippel-Feil) anomalies including one individual with
heterozygous alterations in GDF3 and GDF6.
explanation: >-
Original report of GDF3 variants in Klippel-Feil anomaly, and the source of
the ocular pleiotropy and the co-occurring GDF6 allele noted here.
- reference: PMID:19864492
reference_title: Mutation of the bone morphogenetic protein GDF3 causes ocular and skeletal anomalies.
supports: SUPPORT
evidence_source: MODEL_ORGANISM
quote_role: PRIMARY_RESULT
snippet: Notably, inhibition of the zebrafish co-orthologue of GDF3 accurately recapitulates patient phenotypes.
explanation: >-
Zebrafish knockdown of the GDF3 co-orthologue reproduces the patient
phenotype, supporting the gene-disease relationship.
- name: KFS4
display_name: KFS4 (MYO18B-related, autosomal recessive, with myopathy)
subtype_term:
preferred_term: MYO18B-related Klippel-Feil syndrome with myopathy and facial dysmorphism
term:
id: MONDO:0014689
label: Klippel-Feil anomaly-myopathy-facial dysmorphism syndrome
genes:
- preferred_term: MYO18B
term:
id: hgnc:18150
label: MYO18B
inheritance:
- name: Autosomal Recessive
inheritance_term:
preferred_term: Autosomal recessive inheritance
term:
id: HP:0000007
label: Autosomal recessive inheritance
description: >-
The MYO18B-related recessive form, the one numbered subtype that is
syndromic rather than isolated: biallelic MYO18B variants add myopathy, facial
dysmorphism and short stature to the Klippel-Feil anomaly. The myopathy is
universal and follows a slowly progressive or non-progressive course,
affecting mainly the proximal lower-limb musculature. ClinGen's Congenital
Myopathies expert panel reads the muscle phenotype as congenital myopathy
rather than nemaline myopathy, with nemaline rods a secondary consequence,
which is why this row binds a generic myopathy phenotype rather than a
nemaline one.
evidence:
- reference: PMID:33179433
reference_title: Further delineation of MYO18B-related autosomal recessive Klippel-Feil syndrome with myopathy and facial dysmorphism.
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
quote_role: BACKGROUND
snippet: >-
Klippel-Feil syndrome 4 (KFS4; MIM# 616549) is an autosomal recessive
disorder caused by biallelic pathogenic variants in MYO18B and comprises, in
addition to Klippel-Feil anomaly (KFA), nemaline myopathy, facial
dysmorphism, and short stature.
explanation: >-
Names this concept as Klippel-Feil syndrome 4 and gives its gene, inheritance
and the syndromic features beyond the vertebral anomaly.
- reference: PMID:33179433
reference_title: Further delineation of MYO18B-related autosomal recessive Klippel-Feil syndrome with myopathy and facial dysmorphism.
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
quote_role: PRIMARY_RESULT
snippet: >-
All patients had myopathy of varying severity that followed a slowly
progressive or non-progressive course, affecting primarily the proximal
musculature of the lower limb
explanation: >-
Seven-patient natural-history series establishing the myopathy as a universal
feature and describing its distribution and course.
- reference: CGGV:assertion_00998e50-dd3f-4bfa-8500-34d34980d5c8-2025-04-28T160000.000Z
reference_title: "MYO18B / Klippel-Feil anomaly-myopathy-facial dysmorphism syndrome (Definitive)"
supports: SUPPORT
evidence_source: OTHER
snippet: "MYO18B | HGNC:18150 | Klippel-Feil anomaly-myopathy-facial dysmorphism syndrome | MONDO:0014689 | AR | Definitive"
explanation: >-
ClinGen classifies the MYO18B relationship to this MONDO class as definitive
with autosomal recessive inheritance, which is the term this row binds.
- reference: CGGV:assertion_00998e50-dd3f-4bfa-8500-34d34980d5c8-2025-04-28T160000.000Z
reference_title: "MYO18B / Klippel-Feil anomaly-myopathy-facial dysmorphism syndrome (Definitive)"
supports: SUPPORT
evidence_source: OTHER
snippet: >-
both clinical and functional evidence to date suggest variants in MYO18B are
associated with congenital myopathy, not nemaline myopathy, although nemaline
rods may occur as a secondary consequence of disease
explanation: >-
ClinGen's expert-panel reading of the muscle phenotype, which this row
follows in binding a generic myopathy rather than a nemaline-myopathy term.
inheritance:
- name: Autosomal Recessive
description: >-
Autosomal recessive KFS is caused by biallelic truncating variants in MEOX1.
Autosomal dominant forms caused by GDF6 and GDF3 variants also occur.
evidence:
- reference: PMID:24073994
reference_title: Mutation in MEOX1 gene causes a recessive Klippel-Feil syndrome subtype.
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: Here, we report a truncating mutation in the MEOX1 gene in a KFS family with an autosomal recessive trait.
explanation: >-
Documents autosomal recessive inheritance via a truncating MEOX1 variant in
a consanguineous KFS family.
- name: Autosomal Dominant
description: >-
Two autosomal dominant KFS subtypes are recognized: KFS1 (OMIM 118100),
caused by GDF6 mutations, and KFS3 (OMIM 613702), caused by GDF3 mutations.
The MEOX1-related form (KFS2, OMIM 214300) is the autosomal recessive
subtype.
evidence:
- reference: PMID:24073994
reference_title: Mutation in MEOX1 gene causes a recessive Klippel-Feil syndrome subtype.
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "Genetically, KFS has two subtypes with an autosomal dominant trait: KFS1 (OMIM #118100) is caused by mutations in the GDF6 gene, while KFS3 (OMIM #613702) harbors mutations in the GDF3 gene."
explanation: >-
Documents the two autosomal dominant KFS subtypes and their causative
genes (GDF6 in KFS1, GDF3 in KFS3).
classifications:
isds_skeletal_category:
- classification_value: dysostoses_with_predominant_vertebral_and_costal_involvement
notes: >-
ISDS Nosology and Classification of Genetic Skeletal Disorders, 2019
revision (Mortier et al., PMID:31633310), Table 1 group 35 "Dysostoses with
predominant vertebral with and without costal involvement"; listed as
"Klippel-Feil syndrome".
prevalence:
- population: General
prevalence_class: UNKNOWN
percentage: Unknown
notes: >-
KFS is rare and mostly sporadic; familial cases (including the autosomal
recessive MEOX1 subtype) are uncommon and described in consanguineous
families. Formal population-prevalence estimates are not well established.
pathophysiology:
- name: MEOX1 Somite and Sclerotome Polarity Defect
conforms_to: "axial_segmentation_serial_homology#Disrupted Somite Boundary Formation"
description: >-
Loss of MEOX1, a homeobox transcription factor with a nonredundant role in
somite development, disrupts sclerotome polarity and the somite-boundary /
resegmentation program in the paraxial mesoderm. KFS is the human phenotypic
equivalent of the sclerotome polarity defect seen in Meox1-null mice. The
dominant GDF6- and GDF3-related forms are carried on the separate BMP ligand
node below, and the recessive MYO18B-related form on its own node.
role: central_effector
genes:
- preferred_term: MEOX1
term:
id: hgnc:7013
label: MEOX1
cell_types:
- preferred_term: Presomitic (Paraxial) Mesoderm Cell
term:
id: CL:0011007
label: paraxial cell
biological_processes:
- preferred_term: Somitogenesis
term:
id: GO:0001756
label: somitogenesis
modifier: ABNORMAL
evidence:
- reference: PMID:23290072
reference_title: Mutations in MEOX1, encoding mesenchyme homeobox 1, cause Klippel-Feil anomaly.
supports: SUPPORT
evidence_source: OTHER
snippet: This gene encodes a transcription factor with a well-established and nonredundant role in somite development
explanation: >-
Establishes MEOX1 as a transcription factor with a nonredundant role in
somite development, the mechanism disrupted in KFS.
- reference: PMID:23290072
reference_title: Mutations in MEOX1, encoding mesenchyme homeobox 1, cause Klippel-Feil anomaly.
supports: SUPPORT
evidence_source: MODEL_ORGANISM
snippet: KFS is the human phenotypic equivalent of the sclerotome polarity defect that results from Meox1 deficiency in mice.
explanation: >-
Identifies KFS as the human equivalent of the Meox1-null sclerotome
polarity defect, the somite-boundary mechanism. Evidence source is
MODEL_ORGANISM (mouse).
downstream:
- target: Cervical Vertebral Fusion
description: Failure of the somite-boundary / resegmentation program leaves adjacent cervical vertebrae fused.
causal_link_type: INDIRECT_KNOWN_INTERMEDIATES
intermediate_mechanisms:
- failure of sclerotome resegmentation between adjacent somites
- target: Scoliosis
description: >-
The same somite-boundary defect produces curvature of the spine beyond the
fused cervical segments.
causal_link_type: INDIRECT_UNKNOWN_INTERMEDIATES
evidence:
- reference: PMID:24073994
reference_title: Mutation in MEOX1 gene causes a recessive Klippel-Feil syndrome subtype.
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
quote_role: PRIMARY_RESULT
snippet: >-
Radiological examinations revealed that they carry fusion defects and
numerical abnormalities in the cervical spine, scoliosis, malformations of
the cranial base, and Sprengel's deformity.
explanation: >-
Radiological findings in the family carrying the segregating nonsense MEOX1
allele, which is why this malformation is attributed to the MEOX1 defect
rather than only co-observed with the cervical fusion.
- target: Sprengel Anomaly
description: >-
Congenital elevation of the scapula accompanies the axial malformation in the
MEOX1-related recessive form.
causal_link_type: INDIRECT_UNKNOWN_INTERMEDIATES
evidence:
- reference: PMID:24073994
reference_title: Mutation in MEOX1 gene causes a recessive Klippel-Feil syndrome subtype.
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
quote_role: PRIMARY_RESULT
snippet: >-
Radiological examinations revealed that they carry fusion defects and
numerical abnormalities in the cervical spine, scoliosis, malformations of
the cranial base, and Sprengel's deformity.
explanation: >-
Radiological findings in the family carrying the segregating nonsense MEOX1
allele, which is why this malformation is attributed to the MEOX1 defect
rather than only co-observed with the cervical fusion.
- name: BMP Ligand Signaling Defect at Developing Vertebral Boundaries
description: >-
The two dominant Klippel-Feil forms act through GDF6 and GDF3 rather than
through the MEOX1 transcription factor. GDF6 is expressed at the boundaries of
the developing vertebrae, carpals and tarsals, and losing it in mouse and
Xenopus reproduces fusion at those boundaries together with anterior axial
defects, so this node is a defect of skeletal boundary patterning rather than
of the cervical spine alone. GDF3 is a paralogue investigated for the same
reason, and its mutation perturbs BMP signalling.
biological_scale: MOLECULAR
role: trigger
genes:
- preferred_term: GDF6
term:
id: hgnc:4221
label: GDF6
- preferred_term: GDF3
term:
id: hgnc:4218
label: GDF3
biological_processes:
- preferred_term: BMP signaling pathway
term:
id: GO:0030509
label: BMP signaling pathway
modifier: DYSREGULATED
evidence:
- reference: PMID:18425797
reference_title: Mutations in GDF6 are associated with vertebral segmentation defects in Klippel-Feil syndrome.
supports: SUPPORT
evidence_source: OTHER
quote_role: BACKGROUND
snippet: >-
GDF6 is expressed at the boundaries of the developing carpals, tarsals, and
vertebrae and within the adult vertebral disc.
explanation: >-
States where GDF6 acts, the developing skeletal boundaries this node is
about. The sentence names no organism or cohort, so no study type is graded.
- reference: PMID:18425797
reference_title: Mutations in GDF6 are associated with vertebral segmentation defects in Klippel-Feil syndrome.
supports: SUPPORT
evidence_source: MODEL_ORGANISM
quote_role: PRIMARY_RESULT
snippet: >-
GDF6 knockout mice are best distinguished by fusion of carpals and tarsals
and GDF6 knockdown in Xenopus results in a high incidence of anterior axial
defects consistent with a role for GDF6 in the etiology, diversity, and
variability of KFS.
explanation: >-
Mouse knockout and Xenopus knockdown both produce the fusion and anterior
axial phenotypes, which is the functional support for GDF6 acting at this
node.
- reference: PMID:19864492
reference_title: Mutation of the bone morphogenetic protein GDF3 causes ocular and skeletal anomalies.
supports: SUPPORT
evidence_source: OTHER
quote_role: BACKGROUND
snippet: >-
Due to the contribution of bone morphogenetic proteins to such processes, the
function of the paralogue Growth Differentiation Factor 3 was investigated.
explanation: >-
Places GDF3 as a bone-morphogenetic-protein paralogue, which is why this node
binds the BMP signalling pathway. The sentence states the study's rationale
and names no organism or cohort, so no study type is graded.
- reference: PMID:19864492
reference_title: Mutation of the bone morphogenetic protein GDF3 causes ocular and skeletal anomalies.
supports: SUPPORT
evidence_source: OTHER
quote_role: PRIMARY_RESULT
snippet: >-
By demonstrating the pleiotropic effects of GDF3 mutation, these results
extend the contribution of perturbed BMP signaling to human disease and
potentially implicate multi-allelic inheritance of BMP variants in
developmental disorders.
explanation: >-
The study's own concluding synthesis over its biochemical and zebrafish
analyses, attributing the phenotypes to perturbed BMP signalling; no single
study type applies to the sentence, hence OTHER.
downstream:
- target: Cervical Vertebral Fusion
description: >-
Perturbed BMP ligand signalling at the developing vertebral boundaries
leaves adjacent cervical vertebrae fused.
causal_link_type: INDIRECT_UNKNOWN_INTERMEDIATES
evidence:
- reference: PMID:18425797
reference_title: Mutations in GDF6 are associated with vertebral segmentation defects in Klippel-Feil syndrome.
supports: SUPPORT
evidence_source: MODEL_ORGANISM
quote_role: PRIMARY_RESULT
snippet: >-
GDF6 knockout mice are best distinguished by fusion of carpals and tarsals
and GDF6 knockdown in Xenopus results in a high incidence of anterior axial
defects consistent with a role for GDF6 in the etiology, diversity, and
variability of KFS.
explanation: >-
Loss of GDF6 in two model organisms produces skeletal fusion and anterior
axial defects, the consequence this edge asserts.
- name: MYO18B Loss of Function
description: >-
Biallelic loss-of-function MYO18B alleles are degraded by nonsense-mediated
decay, leaving no functional myosin XVIIIB. ClinGen's expert-panel summary
reads the disease mechanism as homozygous loss of function. The deficiency
yields the Klippel-Feil anomaly together with a myopathy, facial dysmorphism
and short stature, so it is the one Klippel-Feil lesion whose consequences
reach outside the axial skeleton.
biological_scale: MOLECULAR
role: trigger
genes:
- preferred_term: MYO18B
term:
id: hgnc:18150
label: MYO18B
evidence:
- reference: PMID:25748484
reference_title: "A novel syndrome of Klippel-Feil anomaly, myopathy, and characteristic facies is linked to a null mutation in MYO18B."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
quote_role: PRIMARY_RESULT
snippet: >-
There was virtually complete loss of the transcript in peripheral blood,
indicative of nonsense-mediated decay.
explanation: >-
Patient transcript measurement showing the truncating allele is degraded, the
loss-of-function state this node asserts.
- reference: CGGV:assertion_00998e50-dd3f-4bfa-8500-34d34980d5c8-2025-04-28T160000.000Z
reference_title: "MYO18B / Klippel-Feil anomaly-myopathy-facial dysmorphism syndrome (Definitive)"
supports: SUPPORT
evidence_source: OTHER
snippet: >-
the overall mechanism for disease is postulated to be homozygous loss of
function
explanation: >-
ClinGen's expert-panel statement of the disease mechanism, which is what this
node records.
downstream:
- target: Cervical Vertebral Fusion
description: >-
MYO18B deficiency yields the Klippel-Feil anomaly as well as the myopathy. No
intermediate between the loss of myosin XVIIIB and the vertebral fusion is
established.
causal_link_type: INDIRECT_UNKNOWN_INTERMEDIATES
evidence:
- reference: PMID:25748484
reference_title: "A novel syndrome of Klippel-Feil anomaly, myopathy, and characteristic facies is linked to a null mutation in MYO18B."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
quote_role: PRIMARY_RESULT
snippet: >-
Deficiency of MYO18B is linked to a novel developmental disorder which
combines KFA with myopathy.
explanation: >-
Attributes the Klippel-Feil anomaly, alongside the myopathy, to MYO18B
deficiency, without naming an intervening mechanism.
- target: Sarcomeric Myosin Filament Disorganization
description: >-
Loss of myosin XVIIIB disorganizes the sarcomeric myosin filaments of skeletal
muscle fibers.
causal_link_type: DIRECT
evidence:
- reference: PMID:25748484
reference_title: "A novel syndrome of Klippel-Feil anomaly, myopathy, and characteristic facies is linked to a null mutation in MYO18B."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
quote_role: PRIMARY_RESULT
snippet: >-
Electron microscopy of muscle confirms abnormal myosin filaments with
accompanying myopathic changes.
explanation: >-
Muscle ultrastructure in an affected individual, the filament disorder this
edge reaches.
- target: Ptosis
description: >-
Characteristic facial dysmorphism, ptosis among its features, accompanies the
MYO18B-related form.
causal_link_type: INDIRECT_UNKNOWN_INTERMEDIATES
evidence:
- reference: PMID:33179433
reference_title: Further delineation of MYO18B-related autosomal recessive Klippel-Feil syndrome with myopathy and facial dysmorphism.
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
quote_role: PRIMARY_RESULT
snippet: >-
KFA and characteristic dysmorphic features, including ptosis and bulbous
nose, were observed in all but two patients.
explanation: >-
Names ptosis among the dysmorphic features observed in this cohort of
individuals with biallelic MYO18B variants.
- target: Bulbous Nose
description: >-
Characteristic facial dysmorphism, a bulbous nose among its features,
accompanies the MYO18B-related form.
causal_link_type: INDIRECT_UNKNOWN_INTERMEDIATES
evidence:
- reference: PMID:33179433
reference_title: Further delineation of MYO18B-related autosomal recessive Klippel-Feil syndrome with myopathy and facial dysmorphism.
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
quote_role: PRIMARY_RESULT
snippet: >-
KFA and characteristic dysmorphic features, including ptosis and bulbous
nose, were observed in all but two patients.
explanation: >-
Names the bulbous nose among the dysmorphic features observed in this cohort
of individuals with biallelic MYO18B variants.
- target: Short Stature
description: >-
Short stature is part of the MYO18B-related syndrome alongside the vertebral
anomaly, the myopathy and the facial dysmorphism.
causal_link_type: INDIRECT_UNKNOWN_INTERMEDIATES
evidence:
- reference: PMID:33179433
reference_title: Further delineation of MYO18B-related autosomal recessive Klippel-Feil syndrome with myopathy and facial dysmorphism.
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
quote_role: BACKGROUND
snippet: >-
Klippel-Feil syndrome 4 (KFS4; MIM# 616549) is an autosomal recessive
disorder caused by biallelic pathogenic variants in MYO18B and comprises, in
addition to Klippel-Feil anomaly (KFA), nemaline myopathy, facial
dysmorphism, and short stature.
explanation: >-
Lists short stature among the features the MYO18B-related syndrome comprises.
- name: Sarcomeric Myosin Filament Disorganization
description: >-
Muscle from individuals with biallelic MYO18B variants shows abnormal myosin
filaments on electron microscopy with accompanying myopathic change. This node
carries the muscle-fiber consequence of the loss of function, separately from
the vertebral malsegmentation, because nothing reported connects the two.
biological_scale: CELLULAR
role: effector
cell_types:
- preferred_term: Skeletal muscle fiber
term:
id: CL:0008002
label: skeletal muscle fiber
biological_processes:
- preferred_term: Myofibril assembly
term:
id: GO:0030239
label: myofibril assembly
modifier: ABNORMAL
evidence:
- reference: PMID:25748484
reference_title: "A novel syndrome of Klippel-Feil anomaly, myopathy, and characteristic facies is linked to a null mutation in MYO18B."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
quote_role: PRIMARY_RESULT
snippet: >-
Electron microscopy of muscle confirms abnormal myosin filaments with
accompanying myopathic changes.
explanation: >-
Muscle ultrastructure in an affected individual: the disordered myosin
filaments and myopathic change this node binds.
downstream:
- target: Myopathy
description: >-
The disordered sarcomeric myosin presents clinically as a myopathy, universal
in the MYO18B-related form.
causal_link_type: DIRECT
evidence:
- reference: PMID:33179433
reference_title: Further delineation of MYO18B-related autosomal recessive Klippel-Feil syndrome with myopathy and facial dysmorphism.
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
quote_role: PRIMARY_RESULT
snippet: >-
All patients had myopathy of varying severity that followed a slowly
progressive or non-progressive course, affecting primarily the proximal
musculature of the lower limb
explanation: >-
Seven-patient series in which every individual with biallelic MYO18B
variants had a myopathy, the phenotype this edge reaches.
- name: Cervical Vertebral Fusion
conforms_to: "axial_segmentation_serial_homology#Vertebral and Costal Malsegmentation"
description: >-
The somite-boundary defect manifests as a segmentation malformation of the
cervical spine: two or more cervical vertebrae fail to separate and remain
fused, frequently accompanied by scoliosis, Sprengel deformity, and
cranial-base malformations. Because the vertebrae are serially homologous
somite derivatives, the malsegmentation typically involves multiple
contiguous segments.
role: consequence
cell_types:
- preferred_term: Chondrocyte
term:
id: CL:0000138
label: chondrocyte
- preferred_term: Osteoblast
term:
id: CL:0000062
label: osteoblast
biological_processes:
- preferred_term: Embryonic Skeletal System Morphogenesis
term:
id: GO:0048704
label: embryonic skeletal system morphogenesis
modifier: ABNORMAL
evidence:
- reference: PMID:23290072
reference_title: Mutations in MEOX1, encoding mesenchyme homeobox 1, cause Klippel-Feil anomaly.
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: Klippel-Feil syndrome (KFS) is a segmentation malformation of the cervical spine
explanation: >-
Defines KFS as a segmentation malformation of the cervical spine, the
consequence of the somite-boundary defect.
- reference: PMID:24073994
reference_title: Mutation in MEOX1 gene causes a recessive Klippel-Feil syndrome subtype.
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: they carry fusion defects and numerical abnormalities in the cervical spine, scoliosis, malformations of the cranial base, and Sprengel's deformity
explanation: >-
Documents the multi-segment axial malformation bundle — cervical fusion,
scoliosis, cranial-base anomalies, and Sprengel deformity.
downstream:
- target: Short Neck
description: >-
The cervical segmentation malformation manifests clinically as a short neck
with reduced mobility.
causal_link_type: DIRECT
evidence:
- reference: PMID:23290072
reference_title: "Mutations in MEOX1, encoding mesenchyme homeobox 1, cause Klippel-Feil anomaly."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
quote_role: BACKGROUND
snippet: >-
Klippel-Feil syndrome (KFS) is a segmentation malformation of the cervical
spine; clinically, it manifests as a short neck with reduced mobility and a
low posterior hairline.
explanation: >-
States that the cervical segmentation malformation is what manifests
clinically as the short neck and low posterior hairline, which is the edge
asserted here.
- target: Low Posterior Hairline
description: >-
The cervical segmentation malformation manifests clinically as a low
posterior hairline.
causal_link_type: DIRECT
evidence:
- reference: PMID:23290072
reference_title: "Mutations in MEOX1, encoding mesenchyme homeobox 1, cause Klippel-Feil anomaly."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
quote_role: BACKGROUND
snippet: >-
Klippel-Feil syndrome (KFS) is a segmentation malformation of the cervical
spine; clinically, it manifests as a short neck with reduced mobility and a
low posterior hairline.
explanation: >-
States that the cervical segmentation malformation is what manifests
clinically as the short neck and low posterior hairline, which is the edge
asserted here.
genetic:
- name: MEOX1
gene_term:
preferred_term: MEOX1
term:
id: hgnc:7013
label: MEOX1
association: Biallelic loss-of-function variants
relationship_type: CAUSATIVE
subtype: KFS2
notes: >-
Both reported families are consanguineous and both alleles destroy the
transcript, one by frameshift and one by nonsense, so the recessive mechanism
is complete loss of MEOX1 function. The locus maps to 17q21.31.
evidence:
- reference: PMID:23290072
reference_title: "Mutations in MEOX1, encoding mesenchyme homeobox 1, cause Klippel-Feil anomaly."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
quote_role: PRIMARY_RESULT
snippet: >-
We describe a multiplex consanguineous family in which isolated KFS maps to
a single 17q21.31 locus that harbors a homozygous frameshift deletion in
MEOX1; this deletion results in complete instability of the transcript.
explanation: >-
Establishes MEOX1 at 17q21.31 as the isolated-KFS locus and the frameshift
allele as transcript-destroying, the loss-of-function mechanism recorded here.
- reference: PMID:24073994
reference_title: Mutation in MEOX1 gene causes a recessive Klippel-Feil syndrome subtype.
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
quote_role: PRIMARY_RESULT
snippet: >-
Exome sequencing identified the G > A p.Q84X mutation in the MEOX1 gene,
which is segregated based on pedigree status.
explanation: >-
Second consanguineous family with a segregating nonsense MEOX1 allele,
independent confirmation of the recessive gene-disease relationship.
- name: GDF6
gene_term:
preferred_term: GDF6
term:
id: hgnc:4221
label: GDF6
association: Heterozygous variants and a downstream inversion breakpoint
relationship_type: CAUSATIVE
subtype: KFS1
notes: >-
Reported in both familial and sporadic Klippel-Feil syndrome, with a recurrent
missense allele at a highly conserved residue and, separately, an inversion
breakpoint downstream of the gene. Diagnostic yield is low: a whole-exome
study of 37 consecutively recruited Chinese patients with Klippel-Feil
syndrome found no pathogenic variant in GDF6, MEOX1, GDF3 or RIPPLY2 and only
variants of uncertain significance in MYO18B.
evidence:
- reference: PMID:18425797
reference_title: Mutations in GDF6 are associated with vertebral segmentation defects in Klippel-Feil syndrome.
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
quote_role: PRIMARY_RESULT
snippet: >-
Here we report mutations at the GDF6 gene locus in familial and sporadic
cases of KFS
explanation: >-
Original report of GDF6 variants in familial and sporadic Klippel-Feil
syndrome.
- reference: PMID:32278351
reference_title: The mutational burden and oligogenic inheritance in Klippel-Feil syndrome.
supports: NO_EVIDENCE
evidence_source: HUMAN_CLINICAL
quote_role: PRIMARY_RESULT
snippet: >-
We primarily examined rare variants in five reported genes (GDF6, MEOX1,
GDF3, MYO18B and RIPPLY2) associated with KFS and detected three variants of
uncertain significance in MYO18B.
explanation: >-
A 37-patient exome cohort in which none of the four reported dominant or
recessive KFS genes carried a pathogenic variant. It bears on diagnostic
yield, which is the caveat in this note, and not on GDF6 causality, so it is
graded NO_EVIDENCE for the causal claim this record makes.
- name: GDF3
gene_term:
preferred_term: GDF3
term:
id: hgnc:4218
label: GDF3
association: Heterozygous missense variants
relationship_type: CAUSATIVE
subtype: KFS3
notes: >-
A paralogue of GDF6 in the same BMP family. Reported variants are pleiotropic
across ocular and skeletal phenotypes, and one reported individual carried
heterozygous alterations in GDF3 and GDF6 together, so a multi-allelic
contribution of BMP variants has been raised for this form.
evidence:
- reference: PMID:19864492
reference_title: Mutation of the bone morphogenetic protein GDF3 causes ocular and skeletal anomalies.
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
quote_role: PRIMARY_RESULT
snippet: >-
Multiple mis-sense variants were identified in patients with ocular and/or
skeletal (Klippel-Feil) anomalies including one individual with
heterozygous alterations in GDF3 and GDF6.
explanation: >-
Original report of GDF3 variants in Klippel-Feil anomaly and the source of
the co-occurring GDF6 allele noted here.
- reference: PMID:19864492
reference_title: Mutation of the bone morphogenetic protein GDF3 causes ocular and skeletal anomalies.
supports: SUPPORT
evidence_source: OTHER
quote_role: PRIMARY_RESULT
snippet: >-
By demonstrating the pleiotropic effects of GDF3 mutation, these results
extend the contribution of perturbed BMP signaling to human disease and
potentially implicate multi-allelic inheritance of BMP variants in
developmental disorders.
explanation: >-
The study's own concluding synthesis over its biochemical and zebrafish
analyses, which is why no single study type is graded here; it is the source
of the multi-allelic possibility recorded in this note.
- name: MYO18B
gene_term:
preferred_term: MYO18B
term:
id: hgnc:18150
label: MYO18B
association: Biallelic loss-of-function variants
relationship_type: CAUSATIVE
subtype: KFS4
notes: >-
The one Klippel-Feil gene with a ClinGen gene-disease validity assertion:
Definitive, autosomal recessive, curated against MONDO:0014689 by the
Congenital Myopathies expert panel in 2025. ClinGen's summary attributes the
disease mechanism to homozygous loss of function and notes that heterozygous
missense variants have also been reported in Klippel-Feil syndrome. MEOX1,
GDF6 and GDF3 have no ClinGen gene-disease validity row for Klippel-Feil
syndrome in the committed 2026-08-13 snapshot, so their support here rests on
primary literature.
evidence:
- reference: PMID:25748484
reference_title: "A novel syndrome of Klippel-Feil anomaly, myopathy, and characteristic facies is linked to a null mutation in MYO18B."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
quote_role: PRIMARY_RESULT
snippet: >-
They shared a single founder autozygous interval in which whole exome
sequencing revealed a truncating mutation in MYO18B. There was virtually
complete loss of the transcript in peripheral blood, indicative of
nonsense-mediated decay.
explanation: >-
Original report linking a truncating MYO18B allele, subject to
nonsense-mediated decay, to this syndrome in two consanguineous families.
- reference: CGGV:assertion_00998e50-dd3f-4bfa-8500-34d34980d5c8-2025-04-28T160000.000Z
reference_title: "MYO18B / Klippel-Feil anomaly-myopathy-facial dysmorphism syndrome (Definitive)"
supports: SUPPORT
evidence_source: OTHER
snippet: "MYO18B | HGNC:18150 | Klippel-Feil anomaly-myopathy-facial dysmorphism syndrome | MONDO:0014689 | AR | Definitive"
explanation: >-
ClinGen classifies the MYO18B relationship as definitive with autosomal
recessive inheritance.
- reference: CGGV:assertion_00998e50-dd3f-4bfa-8500-34d34980d5c8-2025-04-28T160000.000Z
reference_title: "MYO18B / Klippel-Feil anomaly-myopathy-facial dysmorphism syndrome (Definitive)"
supports: SUPPORT
evidence_source: OTHER
snippet: >-
Although heterozygous MYO18B missense variants were reported in patients
affected by Klippel-Feil syndrome (PMID: 32278351), the overall mechanism for
disease is postulated to be homozygous loss of function
explanation: >-
ClinGen's statement of the disease mechanism and of the heterozygous
missense reports, both recorded in this note.
- name: RIPPLY2
gene_term:
preferred_term: RIPPLY2
term:
id: hgnc:21390
label: RIPPLY2
association: Reported association
relationship_type: UNKNOWN
notes: >-
RIPPLY2 is the fifth gene named in the literature as associated with
Klippel-Feil syndrome alongside GDF6, MEOX1, GDF3 and MYO18B, and MONDO
defines no numbered Klippel-Feil subtype on it. It is recorded here as a
reported association only: no RIPPLY2-specific mechanism, subtype row or
pathophysiology node is asserted, because the support found for it is a
background citation rather than a primary series read for this entry.
evidence:
- reference: PMID:32278351
reference_title: The mutational burden and oligogenic inheritance in Klippel-Feil syndrome.
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
quote_role: PRIMARY_RESULT
snippet: >-
We primarily examined rare variants in five reported genes (GDF6, MEOX1,
GDF3, MYO18B and RIPPLY2) associated with KFS and detected three variants of
uncertain significance in MYO18B.
explanation: >-
Lists RIPPLY2 among the five genes reported as associated with Klippel-Feil
syndrome, which is the whole of the claim this record makes.
phenotypes:
- name: Cervical Vertebral Fusion
description: Fusion of two or more cervical vertebrae from failed segmentation.
phenotype_term:
preferred_term: Cervical segmentation defect
term:
id: HP:0004632
label: Cervical segmentation defect
evidence:
- reference: PMID:24073994
reference_title: Mutation in MEOX1 gene causes a recessive Klippel-Feil syndrome subtype.
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: fusion defects and numerical abnormalities in the cervical spine
explanation: KFS is characterized by cervical vertebral fusion defects.
- name: Short Neck
description: A short neck with reduced mobility, part of the classic KFS triad.
phenotype_term:
preferred_term: Short neck
term:
id: HP:0000470
label: Short neck
evidence:
- reference: PMID:23290072
reference_title: Mutations in MEOX1, encoding mesenchyme homeobox 1, cause Klippel-Feil anomaly.
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: short neck with reduced mobility
explanation: Short neck with reduced mobility is a defining feature of KFS.
- name: Low Posterior Hairline
description: A low posterior hairline, part of the classic KFS triad.
phenotype_term:
preferred_term: Low posterior hairline
term:
id: HP:0002162
label: Low posterior hairline
evidence:
- reference: PMID:23290072
reference_title: Mutations in MEOX1, encoding mesenchyme homeobox 1, cause Klippel-Feil anomaly.
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: low posterior hairline
explanation: A low posterior hairline is part of the classic KFS clinical triad.
- name: Scoliosis
description: Scoliosis frequently accompanies the cervical segmentation defect.
phenotype_term:
preferred_term: Scoliosis
term:
id: HP:0002650
label: Scoliosis
evidence:
- reference: PMID:24073994
reference_title: Mutation in MEOX1 gene causes a recessive Klippel-Feil syndrome subtype.
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: fusion defects and numerical abnormalities in the cervical spine, scoliosis
explanation: Scoliosis is documented among the axial malformations in KFS.
- name: Sprengel Anomaly
description: Congenital elevation of the scapula (Sprengel deformity) is a recognized association.
phenotype_term:
preferred_term: Sprengel anomaly
term:
id: HP:0000912
label: Sprengel anomaly
evidence:
- reference: PMID:24073994
reference_title: Mutation in MEOX1 gene causes a recessive Klippel-Feil syndrome subtype.
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: malformations of the cranial base, and Sprengel's deformity
explanation: Sprengel deformity is documented in the KFS phenotype.
- name: Myopathy
subtype: KFS4
description: >-
Myopathy of varying severity, universal in the MYO18B-related recessive form.
It follows a slowly progressive or non-progressive course and affects mainly
the proximal musculature of the lower limb; distal arthrogryposis and abnormal
interphalangeal creases are also reported.
phenotype_term:
preferred_term: Myopathy
term:
id: HP:0003198
label: Myopathy
evidence:
- reference: PMID:33179433
reference_title: Further delineation of MYO18B-related autosomal recessive Klippel-Feil syndrome with myopathy and facial dysmorphism.
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
quote_role: PRIMARY_RESULT
snippet: >-
All patients had myopathy of varying severity that followed a slowly
progressive or non-progressive course, affecting primarily the proximal
musculature of the lower limb although hand involvement with distal
arthrogryposis and abnormal interphalangeal creases was also observed.
explanation: >-
Seven-patient natural-history series establishing the myopathy as universal in
this subtype and describing its distribution and course.
- name: Ptosis
subtype: KFS4
description: >-
Ptosis, one of the characteristic dysmorphic features of the MYO18B-related
form, observed in all but two of the seven reported patients.
phenotype_term:
preferred_term: Ptosis
term:
id: HP:0000508
label: Ptosis
evidence:
- reference: PMID:33179433
reference_title: Further delineation of MYO18B-related autosomal recessive Klippel-Feil syndrome with myopathy and facial dysmorphism.
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
quote_role: PRIMARY_RESULT
snippet: >-
KFA and characteristic dysmorphic features, including ptosis and bulbous
nose, were observed in all but two patients.
explanation: >-
Names ptosis among the characteristic dysmorphic features of this subtype and
gives its frequency in the reported series.
- name: Bulbous Nose
subtype: KFS4
description: >-
A bulbous nose, one of the characteristic dysmorphic features of the
MYO18B-related form, observed in all but two of the seven reported patients.
phenotype_term:
preferred_term: Bulbous nose
term:
id: HP:0000414
label: Bulbous nose
evidence:
- reference: PMID:33179433
reference_title: Further delineation of MYO18B-related autosomal recessive Klippel-Feil syndrome with myopathy and facial dysmorphism.
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
quote_role: PRIMARY_RESULT
snippet: >-
KFA and characteristic dysmorphic features, including ptosis and bulbous
nose, were observed in all but two patients.
explanation: >-
Names the bulbous nose among the characteristic dysmorphic features of this
subtype and gives its frequency in the reported series.
- name: Short Stature
subtype: KFS4
description: >-
Short stature is one of the features the MYO18B-related syndrome comprises,
alongside the Klippel-Feil anomaly, the myopathy and the facial dysmorphism.
phenotype_term:
preferred_term: Short stature
term:
id: HP:0004322
label: Short stature
evidence:
- reference: PMID:33179433
reference_title: Further delineation of MYO18B-related autosomal recessive Klippel-Feil syndrome with myopathy and facial dysmorphism.
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
quote_role: BACKGROUND
snippet: >-
Klippel-Feil syndrome 4 (KFS4; MIM# 616549) is an autosomal recessive
disorder caused by biallelic pathogenic variants in MYO18B and comprises, in
addition to Klippel-Feil anomaly (KFA), nemaline myopathy, facial
dysmorphism, and short stature.
explanation: >-
Lists short stature among the features the MYO18B-related syndrome comprises.
treatments:
- name: Physical Therapy
description: >-
Symptomatic management with physical therapy to maintain mobility and manage
neck and back pain; the mainstay of KFS care is symptomatic.
therapeutic_modality: BEHAVIORAL
treatment_term:
preferred_term: Physical Therapy
term:
id: NCIT:C15302
label: Physical Therapy
- name: Cervical Spine Surgical Stabilization
description: >-
Surgical stabilization or decompression for cervical instability, neurologic
compromise, or significant scoliosis.
therapeutic_modality: SURGERY
treatment_term:
preferred_term: orthopedic surgical procedure
term:
id: NCIT:C16186
label: Orthopedic Surgical Procedure