Hypertrophic cardiomyopathy 9 (CMH9; OMIM 613765) is the OMIM/MONDO designation for hypertrophic cardiomyopathy (HCM) attributed to variants in TTN, which encodes titin. The entity originates from a single 1999 report of an Arg740Leu substitution identified in one of 82 HCM probands who lacked mutations in the then-known sarcomere genes. The TTN-HCM gene-disease relationship is disputed. ClinGen's Hereditary Cardiovascular Disease Gene Curation Expert Panel classifies TTN-hypertrophic cardiomyopathy as Limited (SOP11, 2025-10-28), and cohort studies find titin-truncating variants (TTNtv) no more frequently in HCM patients than in controls. This contrasts sharply with TTN-dilated cardiomyopathy, which ClinGen classifies as Definitive and for which TTNtv are the single commonest genetic cause; the large DCM literature is NOT transferable to this entity and is deliberately excluded here. dismech therefore models CMH9 as a nominal disease entity carrying a disputed causal gene rather than an established mechanism. The two proposed molecular mechanisms — altered titin Z-disc binding to alpha-actinin, and perturbed titin/MURF1 interaction with enhanced titin degradation near the M-line — are recorded as explicitly hypothetical mechanistic hypotheses, each anchored to a small primary study, and the outstanding validity question is recorded as a knowledge gap.
Ask a research question about Hypertrophic Cardiomyopathy 9. OpenScientist will conduct autonomous deep research using the Disorder Mechanisms Knowledge Base and PubMed literature (typically 10-30 minutes).
Do not include personal health information in your question. Questions and results are cached in your browser's local storage.
Conditions with similar clinical presentations that must be differentiated from Hypertrophic Cardiomyopathy 9:
name: Hypertrophic Cardiomyopathy 9
creation_date: "2026-08-01T00:00:00Z"
description: >-
Hypertrophic cardiomyopathy 9 (CMH9; OMIM 613765) is the OMIM/MONDO
designation for hypertrophic cardiomyopathy (HCM) attributed to variants in
TTN, which encodes titin. The entity originates from a single 1999 report of
an Arg740Leu substitution identified in one of 82 HCM probands who lacked
mutations in the then-known sarcomere genes.
The TTN-HCM gene-disease relationship is disputed. ClinGen's Hereditary
Cardiovascular Disease Gene Curation Expert Panel classifies
TTN-hypertrophic cardiomyopathy as Limited (SOP11, 2025-10-28), and cohort
studies find titin-truncating variants (TTNtv) no more frequently in HCM
patients than in controls. This contrasts sharply with TTN-dilated
cardiomyopathy, which ClinGen classifies as Definitive and for which TTNtv
are the single commonest genetic cause; the large DCM literature is NOT
transferable to this entity and is deliberately excluded here.
dismech therefore models CMH9 as a nominal disease entity carrying a disputed
causal gene rather than an established mechanism. The two proposed molecular
mechanisms — altered titin Z-disc binding to alpha-actinin, and perturbed
titin/MURF1 interaction with enhanced titin degradation near the M-line — are
recorded as explicitly hypothetical mechanistic hypotheses, each anchored to
a small primary study, and the outstanding validity question is recorded as a
knowledge gap.
synonyms:
- CMH9
- TTN hypertrophic cardiomyopathy
- cardiomyopathy, familial hypertrophic, 9
- hypertrophic cardiomyopathy type 9
- hypertrophic cardiomyopathy caused by mutation in TTN
category: Genetic
parents:
- Hypertrophic Cardiomyopathy
- autosomal dominant titinopathy
- Cardiomyopathy
- hereditary disease
disease_term:
preferred_term: hypertrophic cardiomyopathy 9
term:
id: MONDO:0013412
label: hypertrophic cardiomyopathy 9
references:
- reference: PMID:20301725
title: "Nonsyndromic Hypertrophic Cardiomyopathy Overview."
tags:
- GeneReviews
- reference: PMID:38718139
title: "2024 AHA/ACC/AMSSM/HRS/PACES/SCMR Guideline for the Management of Hypertrophic Cardiomyopathy: A Report of the American Heart Association/American College of Cardiology Joint Committee on Clinical Practice Guidelines."
- reference: PMID:39132495
title: "ClinGen Hereditary Cardiovascular Disease Gene Curation Expert Panel: Reappraisal of Genes associated with Hypertrophic Cardiomyopathy."
external_assertions:
- name: ClinGen TTN-hypertrophic cardiomyopathy gene-disease validity assertion
source: ClinGen
assertion_type: gene_disease_validity
external_id: "CGGV:assertion_c17e22eb-c6fc-487d-bcf6-001bb85fdabd-2025-10-28T160000.000Z"
url: https://search.clinicalgenome.org/kb/gene-validity/CGGV:assertion_c17e22eb-c6fc-487d-bcf6-001bb85fdabd-2025-10-28T160000.000Z
description: >-
ClinGen's Hereditary Cardiovascular Disease Gene Curation Expert Panel
classifies the autosomal dominant TTN-hypertrophic cardiomyopathy
(MONDO:0005045) relationship as Limited under SOP11, classified
2025-10-28. This is the authoritative external judgement on the validity
of the CMH9 entity and is the reason this entry does not assert an
established disease mechanism.
evidence:
- reference: CGGV:assertion_c17e22eb-c6fc-487d-bcf6-001bb85fdabd-2025-10-28T160000.000Z
reference_title: "TTN / hypertrophic cardiomyopathy (Limited)"
supports: SUPPORT
evidence_source: OTHER
snippet: "TTN | HGNC:12403 | hypertrophic cardiomyopathy | MONDO:0005045 | AD | Limited"
explanation: >-
ClinGen classifies the TTN-hypertrophic cardiomyopathy gene-disease
relationship as Limited with autosomal dominant inheritance.
- name: ClinGen TTN-dilated cardiomyopathy gene-disease validity assertion
source: ClinGen
assertion_type: gene_disease_validity
external_id: "CGGV:assertion_1ec53217-814e-44b3-a7b7-0f18311c20f3-2025-05-30T160000.000Z"
url: https://search.clinicalgenome.org/kb/gene-validity/CGGV:assertion_1ec53217-814e-44b3-a7b7-0f18311c20f3-2025-05-30T160000.000Z
description: >-
Recorded here only as a contrast and as an explicit anti-conflation guard:
the well-validated TTN cardiomyopathy association is with DILATED
cardiomyopathy (Definitive), not hypertrophic cardiomyopathy. Evidence and
mechanism from the TTN-DCM literature must not be imported into this HCM
entry.
evidence:
- reference: CGGV:assertion_1ec53217-814e-44b3-a7b7-0f18311c20f3-2025-05-30T160000.000Z
reference_title: "TTN / dilated cardiomyopathy (Definitive)"
supports: SUPPORT
evidence_source: OTHER
snippet: "TTN | HGNC:12403 | dilated cardiomyopathy | MONDO:0005021 | AD | Definitive"
explanation: >-
ClinGen classifies TTN-dilated cardiomyopathy as Definitive, in contrast
to the Limited classification for TTN-hypertrophic cardiomyopathy,
establishing that the two TTN-cardiomyopathy relationships are of very
different evidentiary standing.
- reference: PMID:39132495
reference_title: "ClinGen Hereditary Cardiovascular Disease Gene Curation Expert Panel: Reappraisal of Genes associated with Hypertrophic Cardiomyopathy."
supports: SUPPORT
evidence_source: OTHER
snippet: "TTN has definitive gene-disease validity for dilated cardiomyopathy"
explanation: >-
The HCM expert panel itself draws the DCM/HCM distinction explicitly,
confirming that the strong TTN evidence base belongs to dilated, not
hypertrophic, cardiomyopathy.
inheritance:
- name: Autosomal dominant inheritance
description: >-
The reported mode of inheritance for the TTN-HCM relationship is autosomal
dominant, as recorded in the ClinGen curation. Note that this records the
mode asserted for the claimed relationship; because the relationship itself
is classified Limited, published segregation evidence supporting dominant
transmission of an HCM phenotype with a TTN variant is minimal rather than
absent: the index CMH9 observation was a single proband, not a segregating
pedigree, and the one published pedigree (PMID:39895828) is a single
three-generation family in which the variant tracked with three affected
members and was absent from healthy adults, with one unaffected 3-year-old
carrier. Under ACMG that is PP1 at supporting strength only.
inheritance_term:
preferred_term: Autosomal dominant inheritance
term:
id: HP:0000006
label: Autosomal dominant inheritance
evidence:
- reference: CGGV:assertion_c17e22eb-c6fc-487d-bcf6-001bb85fdabd-2025-10-28T160000.000Z
reference_title: "TTN / hypertrophic cardiomyopathy (Limited)"
supports: SUPPORT
evidence_source: OTHER
snippet: "TTN | HGNC:12403 | hypertrophic cardiomyopathy | MONDO:0005045 | AD | Limited"
explanation: >-
The ClinGen row records autosomal dominant as the asserted mode of
inheritance, but simultaneously classifies the underlying gene-disease
relationship as Limited; support is therefore partial.
- reference: PMID:10462489
reference_title: "Structural analysis of the titin gene in hypertrophic cardiomyopathy: identification of a novel disease gene."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: >-
A G to T transversion in codon 740, from CGC to CTC, replacing Arginine
with Leucine was found in a patient.
explanation: >-
The founding CMH9 report describes a heterozygous missense change in a
single patient. It is consistent with dominant action but provides no
family segregation data, which is why support is recorded as partial.
mechanistic_hypotheses:
- hypothesis_group_id: ttn_zdisc_actinin_binding
hypothesis_label: Altered titin Z-disc binding to alpha-actinin
status: EMERGING
description: >-
The original CMH9 proposal: a missense substitution in the titin Z-repeat
region increases the binding affinity of titin for alpha-actinin, perturbing
Z-disc assembly or Z-disc mechanical signalling and thereby producing
hypertrophic remodelling. The supporting data are one proband plus a yeast
two-hybrid binding assay; no animal model, no segregation data, and no
replication in an independent HCM cohort have been reported for the
Arg740Leu variant specifically. (Segregation has since been reported for a
different TTN allele, p.Arg6745Cys, in one family - see the genetic section
- but that does not replicate this variant or this mechanism.)
evidence:
- reference: PMID:10462489
reference_title: "Structural analysis of the titin gene in hypertrophic cardiomyopathy: identification of a novel disease gene."
supports: SUPPORT
evidence_source: IN_VITRO
snippet: >-
This mutation was not found in more than 500 normal chromosomes and
increased the binding affinity of titin to alpha-actitin in the yeast
two-hybrid assay.
explanation: >-
Provides the in vitro binding result on which the hypothesis rests. It is
an interaction assay in yeast, not a demonstration of cardiac
pathogenesis, so it supports the hypothesis only partially. (The abstract
contains the typographical error "alpha-actitin" for alpha-actinin; the
snippet is quoted verbatim.)
notes: >-
Status is EMERGING rather than CANONICAL or ALTERNATIVE because no
independent replication has been published in the 25+ years since the
original report.
- hypothesis_group_id: ttn_murf1_degradation
hypothesis_label: Perturbed titin/MURF1 interaction with enhanced titin ubiquitination
status: EMERGING
description: >-
A later proposal derived from a medaka fish mutant (non-spring heart) with
hypertrophic myocardium and diastolic dysfunction caused by a missense
change in a titin immunoglobulin domain at the M-line/A-band transition.
Screening 96 familial HCM patients without known sarcomeric mutations
identified two further M-line-proximal Ig domain variants; in vitro, both
the fish and human variants increased titin binding to MURF1 and enhanced
ubiquitin-mediated titin degradation. This remains a model-organism plus
in vitro hypothesis and has not established clinical validity for TTN as an
HCM gene.
evidence:
- reference: PMID:31628103
reference_title: "Perturbation of the titin/MURF1 signaling complex is associated with hypertrophic cardiomyopathy in a fish model and in human patients."
supports: SUPPORT
evidence_source: MODEL_ORGANISM
snippet: >-
These findings implicate an impaired interaction between titin and MURF1
as a novel mechanism underlying the pathogenesis of HCM.
explanation: >-
States the hypothesis. The primary evidence is a medaka fish mutant, so
translational validity to human HCM is not established; support is
partial.
- reference: PMID:39132495
reference_title: "ClinGen Hereditary Cardiovascular Disease Gene Curation Expert Panel: Reappraisal of Genes associated with Hypertrophic Cardiomyopathy."
supports: SUPPORT
evidence_source: OTHER
snippet: >-
in a medaka mutagenesis fish model with diastolic dysfunction,
highlighting this as an important region
explanation: >-
ClinGen's expert panel explicitly acknowledges the M-line/A-band
transition region finding as noteworthy while still holding the overall
gene-disease relationship at Limited — which is precisely the epistemic
status this hypothesis is recorded with.
notes: >-
Deliberately not merged with the Z-disc/alpha-actinin hypothesis: the two
implicate different titin regions (Z-repeat versus M-line-proximal Ig
domains) and different partner proteins.
pathophysiology:
- name: Rare TTN Variants in Sarcomere-Negative Hypertrophic Cardiomyopathy
biological_scale: MOLECULAR
mechanism_confidence: HYPOTHETICAL
description: >-
The proximal node of the claimed CMH9 mechanism: a rare heterozygous TTN
variant in a patient with hypertrophic cardiomyopathy who has no variant in
an established sarcomere gene. Both reported series ascertained patients
this way — by residual, gene-elusive HCM — which is a candidate-gene design
that cannot by itself establish causality. Titin is the largest human
protein and carries a high background burden of rare variation, so rare
TTN variants are expected in any sufficiently large cohort. This node is
tagged HYPOTHETICAL because its causal link to the downstream hypertrophic
phenotype is exactly what remains unproven.
genes:
- preferred_term: TTN
term:
id: hgnc:12403
label: TTN
molecular_functions:
- preferred_term: structural constituent of muscle
term:
id: GO:0008307
label: structural constituent of muscle
cell_types:
- preferred_term: Cardiomyocyte
term:
id: CL:0000746
label: cardiac muscle cell
evidence:
- reference: PMID:10462489
reference_title: "Structural analysis of the titin gene in hypertrophic cardiomyopathy: identification of a novel disease gene."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: >-
we searched for a disease-associated mutation in the titin gene in 82 HCM
patients who had no mutation in the known disease genes
explanation: >-
Documents the sarcomere-negative ascertainment design of the founding
CMH9 study and the single variant it yielded.
- reference: PMID:31628103
reference_title: "Perturbation of the titin/MURF1 signaling complex is associated with hypertrophic cardiomyopathy in a fish model and in human patients."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: >-
Screening of mutations in 96 unrelated patients with familial HCM, who had
no previously implicated mutations in known sarcomeric gene candidates,
identified two mutations in Ig domains close to the M-line region of titin.
explanation: >-
The only independent human series reporting candidate TTN variants in HCM,
again using sarcomere-negative ascertainment; two variants in 96 patients.
- reference: PMID:16352453
reference_title: "Genotype-phenotype relationships involving hypertrophic cardiomyopathy-associated mutations in titin, muscle LIM protein, and telethonin."
supports: REFUTE
evidence_source: HUMAN_CLINICAL
snippet: "No TTN mutations were detected."
explanation: >-
A targeted resequencing study in 389 unrelated HCM patients found no TTN
mutations, weakening the claim that TTN is a recurrent HCM disease gene.
Not "no mutations at all": only exons 2, 3, 4 and 14 were sequenced - the
regions previously implicated in HCM or DCM - so this is a negative result
over four of TTN's 364 exons and refutes recurrence at the known sites
rather than excluding TTN involvement across the gene. The same caveat is
stated on this study's other use in the genetic section, so the two
explanations agree.
downstream:
- target: Altered Titin Z-Disc Binding to Alpha-Actinin
causal_link_type: UNKNOWN
hypothesis_groups:
- ttn_zdisc_actinin_binding
description: >-
Proposed consequence of the Z-repeat-region Arg740Leu substitution.
Directness is UNKNOWN because the link rests on a single in vitro binding
assay.
evidence:
- reference: PMID:10462489
reference_title: "Structural analysis of the titin gene in hypertrophic cardiomyopathy: identification of a novel disease gene."
supports: SUPPORT
evidence_source: IN_VITRO
snippet: >-
These observations suggest that the titin mutation may cause HCM in this
patient via altered affinity to alpha-actinin.
explanation: >-
The only published statement linking this variant to altered
alpha-actinin affinity; explicitly hedged by its authors.
- target: Perturbed Titin-MURF1 Interaction and Enhanced Titin Degradation
causal_link_type: UNKNOWN
hypothesis_groups:
- ttn_murf1_degradation
description: >-
Proposed consequence of M-line-proximal Ig domain substitutions, supported
by fish-model and in vitro data only.
evidence:
- reference: PMID:31628103
reference_title: "Perturbation of the titin/MURF1 signaling complex is associated with hypertrophic cardiomyopathy in a fish model and in human patients."
supports: SUPPORT
evidence_source: IN_VITRO
snippet: >-
In vitro studies revealed that the mutations found both in medaka fish
and in familial HCM increased binding of titin to muscle-specific ring
finger protein 1 (MURF1) and enhanced titin degradation by
ubiquitination.
explanation: >-
Links the reported human HCM variants to the MURF1 binding and
degradation change, in vitro.
- name: Altered Titin Z-Disc Binding to Alpha-Actinin
biological_scale: MOLECULAR
mechanism_confidence: HYPOTHETICAL
description: >-
Increased affinity of the titin Z-repeat region for alpha-actinin, reported
in a yeast two-hybrid assay for the Arg740Leu variant. The proposal is that
abnormally tight Z-disc anchoring perturbs sarcomere assembly or Z-disc
mechanosensing. No cardiac cell, tissue, or animal data have been published
for this variant, and the functional direction (gain of binding) has not
been connected experimentally to a hypertrophic response.
molecular_functions:
- preferred_term: actinin binding
term:
id: GO:0042805
label: actinin binding
modifier: INCREASED
biological_processes:
- preferred_term: Cardiac myofibril assembly
term:
id: GO:0055003
label: cardiac myofibril assembly
evidence:
- reference: PMID:10462489
reference_title: "Structural analysis of the titin gene in hypertrophic cardiomyopathy: identification of a novel disease gene."
supports: SUPPORT
evidence_source: IN_VITRO
snippet: >-
This mutation was not found in more than 500 normal chromosomes and
increased the binding affinity of titin to alpha-actitin in the yeast
two-hybrid assay.
explanation: >-
Direct in vitro support for the altered-binding claim itself (as distinct
from any claim that the altered binding causes HCM).
- reference: PMID:10462489
reference_title: "Structural analysis of the titin gene in hypertrophic cardiomyopathy: identification of a novel disease gene."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: >-
These observations suggest that the titin mutation may cause HCM in this
patient via altered affinity to alpha-actinin.
explanation: >-
The authors' own framing is explicitly hedged ("may cause ... in this
patient"), which is the level of confidence this node carries.
downstream:
- target: Hypertrophic Remodeling of the Left Ventricle
causal_link_type: INDIRECT_UNKNOWN_INTERMEDIATES
hypothesis_groups:
- ttn_zdisc_actinin_binding
description: >-
The step from altered Z-disc protein binding to clinical hypertrophy is
entirely unbridged for this variant; no intermediate mechanism has been
demonstrated.
- name: Perturbed Titin-MURF1 Interaction and Enhanced Titin Degradation
biological_scale: MOLECULAR
mechanism_confidence: HYPOTHETICAL
description: >-
Missense substitutions in titin immunoglobulin domains near the M-line
increase titin binding to muscle-specific RING finger protein 1 (MURF1), an
E3 ubiquitin ligase, and enhance ubiquitin-mediated titin degradation. In
the medaka model this was accompanied by fewer myofibrils, disrupted
sarcomeres, pathologically stiff titin isoforms, and M-line disassembly.
Human support is limited to two variants found in a 96-patient
sarcomere-negative familial HCM screen plus in vitro assays.
genes:
- preferred_term: TTN
term:
id: hgnc:12403
label: TTN
biological_processes:
- preferred_term: Protein ubiquitination
term:
id: GO:0016567
label: protein ubiquitination
modifier: INCREASED
- preferred_term: Myofibril assembly
term:
id: GO:0030239
label: myofibril assembly
modifier: DECREASED
cell_types:
- preferred_term: Cardiomyocyte
term:
id: CL:0000746
label: cardiac muscle cell
evidence:
- reference: PMID:31628103
reference_title: "Perturbation of the titin/MURF1 signaling complex is associated with hypertrophic cardiomyopathy in a fish model and in human patients."
supports: SUPPORT
evidence_source: IN_VITRO
snippet: >-
In vitro studies revealed that the mutations found both in medaka fish and
in familial HCM increased binding of titin to muscle-specific ring finger
protein 1 (MURF1) and enhanced titin degradation by ubiquitination.
explanation: >-
Direct in vitro support for increased MURF1 binding and enhanced
ubiquitin-mediated titin degradation.
- reference: PMID:31628103
reference_title: "Perturbation of the titin/MURF1 signaling complex is associated with hypertrophic cardiomyopathy in a fish model and in human patients."
supports: SUPPORT
evidence_source: MODEL_ORGANISM
snippet: >-
The nsh homozygotes had fewer myofibrils, disrupted sarcomeres and
expressed pathologically stiffer titin isoforms.
explanation: >-
Model-organism support for disrupted sarcomere and myofibril assembly. It
is a medaka fish phenotype, so it is partial support for a human
mechanism.
downstream:
- target: Hypertrophic Remodeling of the Left Ventricle
causal_link_type: INDIRECT_UNKNOWN_INTERMEDIATES
hypothesis_groups:
- ttn_murf1_degradation
description: >-
Demonstrated in a fish model; the corresponding chain in human myocardium
carrying these variants has not been shown.
evidence:
- reference: PMID:31628103
reference_title: "Perturbation of the titin/MURF1 signaling complex is associated with hypertrophic cardiomyopathy in a fish model and in human patients."
supports: SUPPORT
evidence_source: MODEL_ORGANISM
snippet: >-
we generated a cardiovascular-mutant medaka fish, non-spring heart
(nsh), which showed diastolic dysfunction and hypertrophic myocardium
explanation: >-
The titin-mutant medaka develops hypertrophic myocardium with diastolic
dysfunction, supporting the edge in a model organism only. Human
evidence for this step is absent, so support is partial.
- name: Hypertrophic Remodeling of the Left Ventricle
biological_scale: TISSUE
mechanism_confidence: HYPOTHETICAL
description: >-
The shared clinical endpoint of all hypertrophic cardiomyopathy: left
ventricular wall thickening with myocyte disarray and impaired diastolic
filling. This node is well established as the phenotype of HCM in general;
it is tagged HYPOTHETICAL here only in the sense that its attribution to a
TTN variant in this entity is unproven. The conserved downstream remodeling
chain is modelled generically in the kb/modules/
cardiomyopathy_maladaptive_remodeling module; no conforms_to link is
declared from this entry because the disease-specific causal edges into
this node are themselves hypothetical.
cell_types:
- preferred_term: Cardiomyocyte
term:
id: CL:0000746
label: cardiac muscle cell
biological_processes:
- preferred_term: Cardiac muscle hypertrophy in response to stress
term:
id: GO:0014898
label: cardiac muscle hypertrophy in response to stress
modifier: INCREASED
evidence:
- reference: PMID:10462489
reference_title: "Structural analysis of the titin gene in hypertrophic cardiomyopathy: identification of a novel disease gene."
supports: SUPPORT
evidence_source: OTHER
snippet: >-
Hypertrophic cardiomyopathy (HCM) is characterized by ventricular
hypertrophy accompanied by myofibrillar disarrays.
explanation: >-
Defines the hypertrophy-plus-disarray endpoint that CMH9, as a subtype
label of HCM, is asserted to produce.
phenotypes:
- category: Clinical
name: Left Ventricular Hypertrophy
description: >-
Ventricular wall thickening is the defining feature of the HCM phenotype
that CMH9 is nominally a subtype of. No TTN-variant-specific hypertrophy
pattern, severity, or distribution has been described. The one measured
observation available in a TTN-variant carrier comes from the p.Arg6745Cys
proband, with basal, mid and apical interventricular septal thicknesses of
approximately 32, 34 and 24 mm - severe asymmetric hypertrophy, but in a
single individual whose variant is not established as causal.
phenotype_term:
preferred_term: Left ventricular hypertrophy
term:
id: HP:0001712
label: Left ventricular hypertrophy
evidence:
- reference: PMID:10462489
reference_title: "Structural analysis of the titin gene in hypertrophic cardiomyopathy: identification of a novel disease gene."
supports: SUPPORT
evidence_source: OTHER
snippet: >-
Hypertrophic cardiomyopathy (HCM) is characterized by ventricular
hypertrophy accompanied by myofibrillar disarrays.
explanation: >-
Establishes ventricular hypertrophy as the defining phenotype of the
disease category to which the reported TTN patient belonged.
- reference: PMID:39895828
reference_title: "A Case Study Identified a New Mutation in the TTN Gene for Inherited Hypertrophic Cardiomyopathy."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: >-
the thickness of the basal interventricular septum was approximately 32
mm, middle interventricular septum was approximately 34 mm, and apical
interventricular septum was approximately 24 mm
explanation: >-
The only measured hypertrophy data in a reported TTN-variant HCM carrier,
and therefore the entry's one genuinely HUMAN_CLINICAL observation for
this phenotype rather than a disease definition. PARTIAL because it is a
single proband and the variant's causality is not established.
- category: Histologic
name: Myocardial Sarcomeric Disarray
description: >-
Myofibrillar/myocyte disarray is the histological hallmark of HCM. It is
inherited by this entry from the HCM phenotype definition rather than from
any TTN-specific pathology series.
phenotype_term:
preferred_term: Myocardial sarcomeric disarray
term:
id: HP:0031333
label: Myocardial sarcomeric disarray
evidence:
- reference: PMID:10462489
reference_title: "Structural analysis of the titin gene in hypertrophic cardiomyopathy: identification of a novel disease gene."
supports: SUPPORT
evidence_source: OTHER
snippet: >-
Hypertrophic cardiomyopathy (HCM) is characterized by ventricular
hypertrophy accompanied by myofibrillar disarrays.
explanation: >-
Names myofibrillar disarray as a defining feature of HCM.
- category: Clinical
name: Left Ventricular Diastolic Dysfunction
description: >-
Impaired diastolic filling accompanies the hypertrophic phenotype. In the
medaka titin model that motivates the MURF1 hypothesis, diastolic
dysfunction was the presenting cardiac abnormality.
phenotype_term:
preferred_term: Left ventricular diastolic dysfunction
term:
id: HP:0025168
label: Left ventricular diastolic dysfunction
evidence:
- reference: PMID:31628103
reference_title: "Perturbation of the titin/MURF1 signaling complex is associated with hypertrophic cardiomyopathy in a fish model and in human patients."
supports: SUPPORT
evidence_source: OTHER
snippet: >-
Hypertrophic cardiomyopathy (HCM) is a hereditary disease characterized by
cardiac hypertrophy with diastolic dysfunction.
explanation: >-
Supports diastolic dysfunction as a feature of HCM generally; it is not a
TTN-specific observation, hence PARTIAL. evidence_source is OTHER, not
HUMAN_CLINICAL: the quoted sentence is the paper's opening definition of
the disease, not a measurement it reports.
genetic:
- name: TTN
gene_term:
preferred_term: TTN
term:
id: hgnc:12403
label: TTN
relationship_type: DISPUTED
association: >-
Disputed causal gene. ClinGen classifies TTN-hypertrophic cardiomyopathy as
Limited. The claimed causal alleles are rare missense substitutions
(Arg740Leu in the Z-repeat region; two Ig-domain variants near the M-line),
each reported once in sarcomere-negative HCM cohorts. Titin-truncating
variants — the mechanism that makes TTN the commonest dilated cardiomyopathy
gene — are NOT enriched in HCM relative to controls, and a separate line of
evidence instead suggests TTNtv may act as an outcome modifier in
established HCM rather than as a cause of it.
evidence:
- reference: PMID:39895828
reference_title: "A Case Study Identified a New Mutation in the TTN Gene for Inherited Hypertrophic Cardiomyopathy."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: >-
WES combined with Sanger sequencing results showed that the other two HCM
patients in this family carried this TTN mutation, while none of the
healthy family members carried the mutation except for a 3 years old girl.
explanation: >-
The only published segregation evidence for any TTN allele in hypertrophic
cardiomyopathy: a fourth allele, p.Arg6745Cys, tracking with disease
across a three-generation Chinese Han family. Curated PARTIAL, and it does
not overturn the Limited classification - it is one small family, ACMG PP1
counts only at supporting strength, there is no functional work, and the
authors themselves note the Ig49 domain has no known protein binding site
nearby. One unaffected 3-year-old carrier is uninformative given
age-dependent penetrance rather than evidence against segregation. This
allele is recorded because omitting it would leave the entry asserting an
absence a reader could falsify in one search, and because the ClinGen
assertion post-dates it (2025-10-28 versus February 2025), which makes the
Limited classification more persuasive rather than less.
- reference: CGGV:assertion_c17e22eb-c6fc-487d-bcf6-001bb85fdabd-2025-10-28T160000.000Z
reference_title: "TTN / hypertrophic cardiomyopathy (Limited)"
supports: SUPPORT
evidence_source: OTHER
snippet: "TTN | HGNC:12403 | hypertrophic cardiomyopathy | MONDO:0005045 | AD | Limited"
explanation: >-
The authoritative gene-disease validity classification: Limited, from
ClinGen's Hereditary Cardiovascular Disease Gene Curation Expert Panel.
- reference: PMID:39132495
reference_title: "ClinGen Hereditary Cardiovascular Disease Gene Curation Expert Panel: Reappraisal of Genes associated with Hypertrophic Cardiomyopathy."
supports: SUPPORT
evidence_source: OTHER
snippet: "TTN 1.2 5.5 6.7 Limited"
explanation: >-
The expert panel's own scoring row for TTN in the HCM reappraisal: 1.2
genetic evidence points plus 5.5 experimental evidence points, total 6.7,
yielding a Limited classification. Note the evidence is weighted toward
experimental rather than genetic (case/segregation) support — the pattern
expected of a gene with a plausible biology but no case-level proof.
- reference: PMID:39132495
reference_title: "ClinGen Hereditary Cardiovascular Disease Gene Curation Expert Panel: Reappraisal of Genes associated with Hypertrophic Cardiomyopathy."
supports: REFUTE
evidence_source: OTHER
snippet: >-
No excess TTN variants were noted in cases compared to controls in two
studies.
explanation: >-
The expert panel's summary of the case-control evidence: no enrichment of
TTN variants in HCM cases over controls, the core reason the relationship
does not rise above Limited.
- reference: PMID:22335739
reference_title: "Truncations of titin causing dilated cardiomyopathy."
supports: REFUTE
evidence_source: HUMAN_CLINICAL
snippet: >-
The frequency of TTN truncating variants identified by next-generation
sequencing of samples from subjects with hypertrophic cardiomyopathy and
controls was similar (1% and 3%, respectively; P = 0.34).
explanation: >-
The directly on-point refutation: truncating TTN variants were no more
common in hypertrophic cardiomyopathy than in controls - numerically
slightly less common - so a truncating-variant mechanism does not account
for HCM. This entry previously quoted the study's dilated-cardiomyopathy
result here, which supported a claim about DCM while the machine-readable
assertion was about HCM; the HCM comparison is quoted instead.
- reference: PMID:22335739
reference_title: "Truncations of titin causing dilated cardiomyopathy."
supports: REFUTE
evidence_source: HUMAN_CLINICAL
snippet: >-
each subject with hypertrophic cardiomyopathy who had a TTN variant also
had a pathogenic mutation in an established hypertrophic cardiomyopathy
gene, suggesting that TTN truncations rarely, if ever, cause hypertrophic
cardiomyopathy.
explanation: >-
The strongest single datum against this entity in the literature. Every
TTN variant found in an HCM subject was accompanied by a pathogenic
variant in a gene with established HCM validity - so the TTN variants were
bystanders in genotype-explained patients, not the cause. Its force is
that it removes the alternative reading in which TTN variants are rare but
real HCM causes.
- reference: PMID:28822653
reference_title: "Titin-Truncating Variants Increase the Risk of Cardiovascular Death in Patients With Hypertrophic Cardiomyopathy."
supports: REFUTE
evidence_source: HUMAN_CLINICAL
snippet: >-
The prevalence of TTNtv in patients with HCM and in healthy controls was
comparable
explanation: >-
In 529 Chinese HCM patients versus 307 controls, TTNtv prevalence was
indistinguishable (2.5% vs 2.6%), independently refuting TTN truncating
variants as a cause of HCM.
- reference: PMID:28822653
reference_title: "Titin-Truncating Variants Increase the Risk of Cardiovascular Death in Patients With Hypertrophic Cardiomyopathy."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: >-
Our study suggests that TTNtv might be a genetic modifier of HCM and
confer an increased risk for cardiovascular death.
explanation: >-
Supports the alternative reading of the TTN-HCM relationship — modifier of
outcome rather than cause of disease. Hedged by the authors and based on 3
events among 13 TTNtv carriers, so support is partial.
- reference: PMID:16352453
reference_title: "Genotype-phenotype relationships involving hypertrophic cardiomyopathy-associated mutations in titin, muscle LIM protein, and telethonin."
supports: REFUTE
evidence_source: HUMAN_CLINICAL
snippet: "No TTN mutations were detected."
explanation: >-
Targeted analysis in 389 unrelated HCM patients yielded no TTN mutations,
providing negative replication for the founding CMH9 report. The scope
caveat matters and is stated rather than left implicit: only exons 2, 3, 4
and 14 were sequenced - the regions previously implicated in HCM or DCM -
which is four of TTN's 364 exons. This is a negative result over roughly
1% of the gene, so it refutes recurrence at the known sites rather than
excluding TTN involvement generally.
- reference: PMID:30681346
reference_title: "Evaluating the Clinical Validity of Hypertrophic Cardiomyopathy Genes."
supports: SUPPORT
evidence_source: OTHER
snippet: >-
The majority of genes previously reported as causative of HCM and commonly
included in diagnostic tests have limited or no evidence of disease
association.
explanation: >-
Provides the general context in which the TTN-HCM claim sits: a systematic
ClinGen-methodology curation found that only 8 of 33 curated HCM genes had
definitive evidence, with 22 having limited or no evidence. Partial because
this quoted conclusion is a summary statement rather than the TTN-specific
row.
notes: >-
Practical consequence for variant interpretation: a rare TTN variant found
on a multigene HCM panel should not be reported as an established cause of
the patient's hypertrophy.
prevalence:
- population: Published TTN-attributed hypertrophic cardiomyopathy probands worldwide
measure_type: CASES_IN_LITERATURE
prevalence_class: NOT_YET_DOCUMENTED
notes: >-
No prevalence can be stated for CMH9, and the reason is the entity's own
disputed status rather than a gap in ascertainment: counting cases requires
a rule for deciding which TTN variant carriers have the disease, and that is
exactly what is unsettled. The published case base is roughly four probands
- the 1999 Arg740Leu index case, two Ig-domain variants from a 96-patient
screen, and the 2025 p.Arg6745Cys family - none independently replicated. By
contrast, TTN variant carriage among HCM patients is well measured and runs
at control frequency, which is the finding that makes the case count
uninterpretable rather than merely small.
evidence:
- reference: PMID:22335739
reference_title: "Truncations of titin causing dilated cardiomyopathy."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: >-
The frequency of TTN truncating variants identified by next-generation
sequencing of samples from subjects with hypertrophic cardiomyopathy and
controls was similar (1% and 3%, respectively; P = 0.34).
explanation: >-
Supplies the carriage-versus-control comparison that makes a CMH9 case
count uninterpretable. PARTIAL because it measures truncating variants
rather than the missense alleles this entity is built on.
diagnosis:
- name: Multigene HCM panel, with TTN not reportable as an established cause
diagnosis_term:
preferred_term: Multigene hypertrophic cardiomyopathy panel testing
term:
id: NCIT:C15709
label: Genetic Testing
description: >-
This is the clinically actionable output of the entry, and it is a reporting
rule rather than a testing indication. TTN is on many cardiomyopathy panels
because of its Definitive relationship with DILATED cardiomyopathy; a rare
TTN variant returned in a patient being investigated for hypertrophic
cardiomyopathy must not be reported as an established cause of that
phenotype, must not drive predictive cascade testing in relatives, and does
not end the search for a variant in a gene with adequate validity. The
empirical basis is that TTN variant carriage in HCM runs at control
frequency, and that in the one study that checked, every HCM subject with a
TTN variant also carried a pathogenic variant in an established HCM gene -
so finding TTN and stopping risks missing the actual cause.
results: >-
A rare TTN variant in an HCM workup is an uncertain finding at gene level,
not a molecular diagnosis. Continue interpreting the panel as though TTN
were absent from it.
evidence:
- reference: PMID:22335739
reference_title: "Truncations of titin causing dilated cardiomyopathy."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: >-
each subject with hypertrophic cardiomyopathy who had a TTN variant also
had a pathogenic mutation in an established hypertrophic cardiomyopathy
gene, suggesting that TTN truncations rarely, if ever, cause hypertrophic
cardiomyopathy.
explanation: >-
The direct basis for the reporting rule: TTN variants in HCM patients
co-occurred with a genuine cause every time, so reporting TTN would have
been wrong in every case examined.
notes: >-
This rule previously existed only as free text in the genetic section's
notes. It is promoted here so it is machine-readable, since it is the single
most useful output of a disputed-validity entry.
differential_diagnoses:
- name: Sarcomeric hypertrophic cardiomyopathy
disease_term:
preferred_term: familial hypertrophic cardiomyopathy
term:
id: MONDO:0024573
label: familial hypertrophic cardiomyopathy
description: >-
The differential that matters most for this entity, because it is not merely
an alternative but the likelier explanation in any patient where a TTN
variant is found. The definitive HCM genes - MYBPC3, MYH7, TNNT2, TNNI3,
TPM1, ACTC1, MYL2, MYL3 - account for the great majority of genotype-positive
HCM, and in the one systematic comparison every HCM patient carrying a TTN
variant also carried a pathogenic variant in one of them.
distinguishing_features:
- 'Sarcomeric HCM: a pathogenic variant in a gene with definitive HCM validity.
CMH9: a TTN variant whose gene-disease relationship is classified Limited,
frequently alongside an unrecognised sarcomeric variant.'
evidence:
- reference: PMID:30681346
reference_title: "Evaluating the Clinical Validity of Hypertrophic Cardiomyopathy Genes."
supports: SUPPORT
evidence_source: OTHER
snippet: >-
Of 33 HCM genes, only 8 (24%) were categorized as definitive ( MYBPC3,
MYH7, TNNT2, TNNI3, TPM1, ACTC1, MYL2, and MYL3)
explanation: >-
Names the definitive-validity genes that constitute this differential, and
by omission places TTN outside them.
- name: TTN-related dilated cardiomyopathy
description: >-
The most consequential confusion risk for this entity, and the reason the
entry carries an external_assertions contrast. TTN-dilated cardiomyopathy is
ClinGen Definitive and titin-truncating variants are its commonest genetic
cause; TTN-hypertrophic cardiomyopathy is Limited. A curator or clinician
encountering "TTN cardiomyopathy" in the literature is far more likely to be
reading about the dilated entity, and that literature is not transferable
here.
distinguishing_features:
- 'TTN-DCM: truncating variants, ClinGen Definitive, ventricular dilation with
systolic impairment. CMH9: rare missense variants, ClinGen Limited,
hypertrophy - and truncating variants occur at control frequency.'
evidence:
- reference: PMID:22335739
reference_title: "Truncations of titin causing dilated cardiomyopathy."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: >-
The frequency of TTN truncating variants identified by next-generation
sequencing of samples from subjects with hypertrophic cardiomyopathy and
controls was similar (1% and 3%, respectively; P = 0.34).
explanation: >-
The same study that established the DCM association found no HCM
association, which is the cleanest single demonstration that the two
entities must be kept apart.
- name: Non-sarcomeric phenocopies of left ventricular hypertrophy
description: >-
Phenocopy exclusion carries extra weight in a sarcomere-negative HCM patient,
which is by definition the population in which TTN variants were sought - the
founding CMH9 cohort consisted of probands without mutations in the
then-known sarcomere genes. Fabry disease, ATTR and AL amyloidosis, Danon
disease, PRKAG2 glycogen storage cardiomyopathy, and the RASopathies all
produce unexplained left ventricular hypertrophy, several are treatable, and
all are better-established explanations than a Limited-validity TTN variant.
Athlete's heart and hypertensive hypertrophy account for the non-genetic end
of the differential.
notes: >-
Deliberately carries no evidence item. The phenocopy list is standard
practice for unexplained left ventricular hypertrophy rather than a
TTN-specific finding, and no cached source for this entity enumerates it;
stating that is preferable to attaching a citation that does not support it.
experimental_models:
- name: non-spring heart (nsh) medaka fish titin Ig-domain mutant
description: >-
The primary experimental support for the titin/MURF1 hypothesis, and the
only whole-organism model in this entry. A cardiovascular-mutant medaka
carrying a missense change in an Ig domain at the M-line-A-band transition
zone of titin shows diastolic dysfunction and hypertrophic myocardium;
homozygotes have fewer myofibrils, disrupted sarcomeres and stiffer titin
isoforms, while heterozygotes show M-line disassembly resembling the human
pathology. Positional cloning of that mutation is what directed the screen of
96 sarcomere-negative familial HCM patients in which the two human Ig-domain
alleles curated here were found.
experimental_model_type: OTHER
organism:
preferred_term: Japanese medaka
term:
id: NCBITaxon:8090
label: Oryzias latipes
publication: PMID:31628103
modeled_mechanisms:
- target: Perturbed Titin-MURF1 Interaction and Enhanced Titin Degradation
relationship: PARTIALLY_RECAPITULATES
fidelity: LOW
description: >-
Reproduces a hypertrophic, diastolically impaired myocardium from a titin
Ig-domain missense change, which is the mechanism this node proposes.
limitations: >-
Fidelity is LOW and deliberately so. This is a fish, the causal direction
in the model runs from a mutation found in fish to a human screen rather
than from a validated human allele, the human phenotype is dominant while
the fish structural phenotype is clearest in homozygotes, and no mammalian
model of any TTN HCM allele exists. The model motivates the hypothesis; it
does not establish the human mechanism, which is why every node in this
entry remains HYPOTHETICAL.
evidence:
- reference: PMID:31628103
reference_title: "Perturbation of the titin/MURF1 signaling complex is associated with hypertrophic cardiomyopathy in a fish model and in human patients."
supports: SUPPORT
evidence_source: MODEL_ORGANISM
snippet: >-
The nsh homozygotes had fewer myofibrils, disrupted sarcomeres and
expressed pathologically stiffer titin isoforms.
explanation: >-
The structural phenotype of the model, and the observation that ties a
titin Ig-domain lesion to sarcomeric disruption.
evidence:
- reference: PMID:31628103
reference_title: "Perturbation of the titin/MURF1 signaling complex is associated with hypertrophic cardiomyopathy in a fish model and in human patients."
supports: SUPPORT
evidence_source: MODEL_ORGANISM
snippet: >-
we generated a cardiovascular-mutant medaka fish, non-spring heart (nsh),
which showed diastolic dysfunction and hypertrophic myocardium.
explanation: >-
Describes the model and its cardiac phenotype.
discussions:
- discussion_id: ttn_hcm_gene_disease_validity
kind: KNOWLEDGE_GAP
status: OPEN
prompt: >-
Is TTN a genuine hypertrophic cardiomyopathy gene at all, or is CMH9 a
historical entity that should be retired?
rationale: >-
ClinGen classifies TTN-HCM as Limited. The entity rests on one 1999 proband
plus two variants in a later 96-patient screen, with segregation reported in
only one small three-generation family (PMID:39895828, p.Arg6745Cys, with
one unaffected 3-year-old carrier), no independent replication of the index
variant, a targeted 389-patient study that was negative across the four
exons it examined, and TTNtv frequencies in HCM that match controls. Note
that the ClinGen assertion is dated 2025-10-28 and that segregation report
is from February 2025, so the expert panel plausibly had it available and
still classified the relationship as Limited - which is a stronger argument
for the classification than an absence of segregation would have been. What is missing is precisely the evidence class that would settle
it: large-cohort case-control burden testing of rare TTN MISSENSE variation
(not truncating variation) in HCM against gnomAD-scale controls, plus
segregation in multiplex families. Until that exists, dismech records CMH9
as a disputed entity and declines to assert a mechanism.
proposed_experiments:
- experiment_id: ttn_hcm_rare_missense_burden
name: Region-stratified rare TTN missense burden test in HCM
description: >-
Case-control burden analysis of rare TTN missense variation in a large
sarcomere-negative HCM cohort against population reference data,
stratified by Z-disc, I-band, A-band, and M-line domains. Truncating
variation is explicitly not the variable of interest here, since it has
already been shown not to be enriched in HCM.
supporting_outcome:
- >-
Significant excess of rare missense variation in a specific titin region
in HCM cases would support a genuine, region-restricted TTN-HCM
relationship and could move the ClinGen classification above Limited.
refuting_outcome:
- >-
No regional excess over population expectation would support retiring
CMH9 as a distinct disease entity.
- experiment_id: ttn_hcm_variant_segregation
name: Segregation analysis of the reported CMH9 variants
description: >-
Recontact and genotype extended pedigrees, where available, for the
Arg740Leu Z-repeat variant and the two M-line-proximal Ig-domain variants,
testing co-segregation with an HCM phenotype.
supporting_outcome:
- >-
Co-segregation with HCM across multiple informative meioses would supply
the evidence class most conspicuously missing from the current curation.
- experiment_id: ttn_hcm_ipsc_cardiomyocyte_model
name: Isogenic iPSC-cardiomyocyte modelling of reported TTN variants
description: >-
Introduce the reported TTN variants into isogenic human iPSC-derived
cardiomyocytes and assess hypertrophic growth, sarcomere organisation,
titin turnover, and diastolic relaxation against isogenic controls.
supporting_outcome:
- >-
A reproducible hypertrophic and diastolic phenotype in human
cardiomyocytes would provide the human-cell functional evidence that the
yeast two-hybrid and medaka data currently substitute for.
evidence:
- reference: CGGV:assertion_c17e22eb-c6fc-487d-bcf6-001bb85fdabd-2025-10-28T160000.000Z
reference_title: "TTN / hypertrophic cardiomyopathy (Limited)"
supports: SUPPORT
evidence_source: OTHER
snippet: "TTN | HGNC:12403 | hypertrophic cardiomyopathy | MONDO:0005045 | AD | Limited"
explanation: >-
The Limited classification is the formal statement of the gap.
- reference: PMID:28822653
reference_title: "Titin-Truncating Variants Increase the Risk of Cardiovascular Death in Patients With Hypertrophic Cardiomyopathy."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: >-
However, their significance in hypertrophic cardiomyopathy (HCM) is still
unclear.
explanation: >-
Contemporary authors state the uncertainty explicitly.
- reference: PMID:39132495
reference_title: "ClinGen Hereditary Cardiovascular Disease Gene Curation Expert Panel: Reappraisal of Genes associated with Hypertrophic Cardiomyopathy."
supports: SUPPORT
evidence_source: OTHER
snippet: >-
Clinical laboratories are discouraged from reporting variants in genes
with disputed HCM-association
explanation: >-
Frames the clinical stakes of leaving this gap unresolved. TTN was held at
Limited rather than downgraded to Disputed, so it sits just above the
threshold at which the panel advises laboratories not to report variants
at all.
- discussion_id: ttn_hcm_cause_versus_modifier
kind: CONTROVERSY
status: OPEN
prompt: >-
If TTN variants are not a cause of hypertrophic cardiomyopathy, are
titin-truncating variants nonetheless a prognostic modifier within
established HCM?
rationale: >-
These are separable claims and the evidence points in opposite directions
for each. TTNtv prevalence in HCM equals that in controls (arguing against
causation), yet in the same cohort TTNtv carriers had a markedly higher rate
of cardiovascular death during follow-up (adjusted hazard ratio 6.88).
A modifier effect would not make TTN an HCM gene, but would make TTN
genotype clinically meaningful in HCM. The finding is single-cohort, rests
on 3 deaths among 13 carriers, and has not been replicated.
attaches_to:
- "genetic#TTN"
proposed_experiments:
- experiment_id: ttntv_hcm_mortality_replication
name: Independent replication of the TTNtv-cardiovascular-mortality signal in HCM
description: >-
Prospective or retrospective replication of the association between
titin-truncating variant carrier status and cardiovascular death within an
independent, ancestrally distinct HCM cohort powered for an adequate
number of events.
supporting_outcome:
- >-
Replication would establish TTN genotype as a prognostic modifier in HCM
even though TTN is not an HCM disease gene.
refuting_outcome:
- >-
Failure to replicate would leave the single-cohort finding as an
unconfirmed signal likely inflated by the small number of events.
evidence:
- reference: PMID:28822653
reference_title: "Titin-Truncating Variants Increase the Risk of Cardiovascular Death in Patients With Hypertrophic Cardiomyopathy."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: >-
Our study suggests that TTNtv might be a genetic modifier of HCM and
confer an increased risk for cardiovascular death.
explanation: >-
States the modifier hypothesis that this controversy is about.
notes: >-
Scope decision versus the existing titinopathy entry. MONDO:0013412 has two
parents: MONDO:0024573 (familial hypertrophic cardiomyopathy, not curated) and
MONDO:0100494 (autosomal dominant titinopathy, which IS curated as
kb/disorders/TTN_Related_Myopathy_Dominant_Negative_TTNsv.yaml). A
parent-term duplicate check was therefore run before creating this file. The
two entries are distinct sibling entities, not duplicates: the existing entry
covers a SKELETAL MUSCLE myopathy (distal weakness, contractures) caused by
heterozygous multi-exon IN-FRAME STRUCTURAL VARIANTS acting by a
dominant-negative internally-deleted titin protein, and it explicitly states
that it "does not attempt to cover the full TTN disease spectrum"; it never
mentions hypertrophic cardiomyopathy. This entry covers a CARDIAC hypertrophic
phenotype attributed to rare MISSENSE substitutions (Z-repeat Arg740Leu;
M-line-proximal Ig domains) with entirely different proposed mechanisms
(alpha-actinin binding, MURF1-mediated titin degradation), a different OMIM
number (613765), and its own exact MONDO term — which the titinopathy entry
lacks and only approximates via its parent. Because MONDO:0013412 exists as an
exact term, no `mappings` block is needed here.
Curation guard (Named Entity Confusion): TTN's dominant cardiomyopathy
association is with DILATED cardiomyopathy (MONDO:0005021, ClinGen
Definitive), where truncating variants explain roughly a quarter of familial
cases. That literature is far larger than the HCM literature and is easy to
import by mistake. It is intentionally excluded from this entry; see
kb/disorders/Dilated_Cardiomyopathy.yaml for the DCM entity. The umbrella
entry kb/disorders/Hypertrophic_Cardiomyopathy.yaml (MONDO:0005045) already
lists TTN among HCM panel genes and cites the same ClinGen Limited assertion.
Reference-mining note, recorded so it is not re-litigated: PMID:20301725
(GeneReviews Nonsyndromic Hypertrophic Cardiomyopathy Overview) and
PMID:38718139 (2024 AHA/ACC guideline) are both cached as abstract_only, and
neither record contains minable content - GeneReviews carries only its
six-point "purpose of this overview" list, and the guideline abstract carries
only AIM/METHODS/STRUCTURE sections. No evidence item cites either, and none
can without fabrication. In particular, the penetrance figures that circulate
for HCM generally must not be attributed to PMID:20301725 from this entry -
that text is not in the cached record and would fail reference validation.
ClinVar caveat for Arg740Leu: the ClinVar record for this allele
(VCV000012649) is a 0-star, OMIM-derived "Pathogenic" assertion dated
1999-08-27 with no assertion criteria provided, predating the ACMG/AMP
framework by 16 years. It is the same 1999 report this entity rests on, not
independent confirmation of it, and a reader who checks ClinVar and sees
"Pathogenic" should know that. This is directly relevant to why the
gene-disease relationship is disputed while a variant-level database still
reads as settled.
Treatments are deliberately absent, and this is a scoping decision rather than
an omission. No TTN-genotype-directed therapy exists, and every management
option that would appear here - negative inotropes, myosin inhibitors,
ICD, septal reduction, transplantation - is indicated on the hypertrophic
cardiomyopathy phenotype irrespective of genotype. Curating them under a
Limited-validity entity would imply that a TTN variant carries management
consequences, which is the opposite of this entry's central claim. See
kb/disorders/Hypertrophic_Cardiomyopathy.yaml for genotype-agnostic
management.
Hypertrophic cardiomyopathy 9 (CMH9) is the OMIM disease-series designation for hypertrophic cardiomyopathy (HCM) attributed to heterozygous variants in TTN (titin) on chromosome 2q31.2. MONDO defines it purely by gene attribution, not by any distinguishing clinical or mechanistic feature:
"Any hypertrophic cardiomyopathy in which the cause of the disease is a mutation in the TTN gene." — MONDO:0013412 definition (
MONDO:patterns/disease_series_by_gene)
The entity originates from Satoh et al. (1999), who screened TTN in 82 HCM probands negative for the then-known sarcomere genes and found one heterozygous c.2219G>T, p.Arg740Leu substitution (PMID:10462489, Biochem Biophys Res Commun 262:411‑7):
"A G to T transversion in codon 740, from CGC to CTC, replacing Arginine with Leucine was found in a patient. This mutation was not found in more than 500 normal chromosomes and increased the binding affinity of titin to alpha‑actitin [sic] in the yeast two‑hybrid assay. These observations suggest that the titin mutation may cause HCM in this patient via altered affinity to alpha‑actinin." (HUMAN_CLINICAL + IN_VITRO; note the authors' own hedge)
There is no CMH9-specific clinical syndrome. Reported patients present as ordinary nonsyndromic HCM. No TTN-specific hypertrophy pattern, age of onset, arrhythmic profile, or treatment response has ever been described.
| Resource | Identifier |
|---|---|
| OMIM | #613765 (CARDIOMYOPATHY, FAMILIAL HYPERTROPHIC, 9; CMH9) |
| MONDO | MONDO:0013412 (hypertrophic cardiomyopathy 9) |
| DOID | DOID:0110315 |
| MedGen / UMLS | MEDGEN:348780 / UMLS:C1861065 |
| MeSH (supplementary concept) | MESH:C566044 |
| GARD | GARD:0024921 |
| GTR condition | C1861065 ("Hypertrophic cardiomyopathy 9") |
| Gene | TTN, HGNC:12403, OMIM *188840, NCBI Gene 7273, Ensembl ENSG00000155657, UniProt Q8WZ42 |
| Parent MONDO classes | MONDO:0024573 (familial hypertrophic cardiomyopathy); MONDO:0100494 (autosomal dominant titinopathy); equivalent to MONDO:0005045 ∧ (RO:0004003 some HGNC:12403) |
| ICD‑10‑CM | I42.1 (obstructive HCM) / I42.2 (other HCM) — no CMH9-specific code |
| ICD‑11 | BC43 hypertrophic cardiomyopathy block (familial‑genetic and non‑obstructive subcategories BC43.10 / BC43.11) — no CMH9-specific code |
| Orphanet | No dedicated ORPHA code. Familial isolated HCM (ORPHA:155) is flagged "NON RARE IN EUROPE" and is outside the Orphanet rare-disease nomenclature; ORPHA:217569 ("rare hypertrophic cardiomyopathy") is a group-of-disorders node with prevalence/inheritance "not specified" |
Ontology suggestion for the KB disease_term: MONDO:0013412 (exact). Do not substitute MONDO:0005045 (hypertrophic cardiomyopathy) — that is the umbrella entity.
CMH9; cardiomyopathy, familial hypertrophic, 9 (or type 9); hypertrophic cardiomyopathy type 9; TTN hypertrophic cardiomyopathy; hypertrophic cardiomyopathy caused by mutation in TTN. (All are EXACT synonyms in MONDO.)
Disease-level aggregated resources only (OMIM, MONDO, ClinGen, ClinVar, GeneReviews) plus a handful of small primary case series. No EHR/registry-derived, patient-level CMH9 cohort exists. Because the entity is defined by gene attribution rather than a distinguishable phenotype, any EHR case-finding for "CMH9" would in practice retrieve generic HCM cases (I42.1/I42.2) plus a TTN genotype.
Claimed cause: heterozygous rare missense variation in TTN — a disputed causal claim.
Three lines of causal claim exist, all thin:
Counter-evidence is stronger than the positive evidence:
Interpretation for the KB: model TTN with relationship_type: DISPUTED, and record the mechanism nodes at mechanism_confidence: HYPOTHETICAL.
Genetic. - TTN rare missense variation — disputed (above). - Background rare-variant burden is the confounder. Titin is the largest human protein (~34,350 aa canonical; up to ~35,991 aa inferred‑complete isoform; ~364 exons in the meta‑transcript NM_001267550). Every genome carries multiple rare TTN missense alleles; ~2–3% of unselected individuals carry a truncating allele (3% of controls in PMID:22335739). Any sufficiently large candidate-gene screen will therefore find rare TTN variants irrespective of causality — the core methodological problem with CMH9. - Real HCM risk factors (parent phenotype): pathogenic variants in the 8 definitive sarcomere genes — MYBPC3 (~50% of genotype‑positive), MYH7 (~33%), TNNI3 (~5%), TNNT2 (~4%), then TPM1, ACTC1, MYL2, MYL3 (<3% each) (GeneReviews, PMID:20301725). The 2025 ClinGen reappraisal recognises 29 genes at moderate/strong/definitive for HCM or isolated LVH (MYBPC3, MYH7, TNNT2, TNNI3, TNNC1, TPM1, ACTC1, MYL2, MYL3, ACTN2, CSRP3, FHOD3, FLNC, PRKAG2, PLN, DES, FHL1, LAMP2, GLA, CACNA1C, TTR, PTPN11, RAF1, RIT1, and others). - Polygenic background modulates penetrance and expressivity in HCM generally; low-penetrance sarcomere variants contribute additive risk (Circulation 2025, "Low Penetrance Sarcomere Variants Contribute to Additive Risk in Hypertrophic Cardiomyopathy"). - Modifier claim specific to TTN: TTNtv may be an outcome modifier rather than a cause — see §4.5.
Environmental / demographic (parent phenotype; none TTN‑specific). - Age (penetrance is age-dependent; typical onset adolescence–early adulthood). - Male sex (over-represented in HCM cohorts; adverse events occur earlier in male TTN carriers in the DCM setting, PMID:22335739). - Intense competitive athletic training — a trigger for arrhythmic events and a differential-diagnosis confounder ("athlete's heart"), not an initiating cause. - Hypertension and aortic stenosis are phenocopy causes of LVH, not CMH9 risk factors. - No toxin, infectious, occupational, or dietary exposure has ever been linked to CMH9. Not applicable / no data.
No CMH9-specific protective genetic or environmental factor has been reported. For HCM generally: avoidance of burst/extreme exertion and of dehydration/volume depletion in LVOT-obstructive physiology; blood-pressure control; avoidance of pure vasodilators and high-dose diuretics in obstructive disease. These are management rather than validated primary prevention. No protective allele is documented in gnomAD-scale data.
No CMH9-specific GxE data. In the broader titin field, the best-characterised GxE is in DCM, not HCM: TTNtv carriers show a stress- or exposure-dependent phenotype (alcohol, peripartum, chemotherapy, atrial fibrillation, hypertension; e.g. Nat Cardiovasc Res 2024, "Titin truncating variants, cardiovascular risk factors and the risk of atrial fibrillation and heart failure"), and heterozygous Ttn-truncation mice are normal at baseline but decompensate under angiotensin II/isoproterenol or transverse aortic constriction (PMID:26504781; MODEL_ORGANISM). Do not transfer this to CMH9 — it is DCM biology.
No phenotype in this list is TTN-specific; all are inherited from the HCM parent phenotype, with the exception of the diastolic-dysfunction emphasis that comes from the medaka model. Frequencies below are HCM-cohort figures (GeneReviews PMID:20301725; 2024 AHA/ACC guideline PMID:38718139) and should be curated as parent-phenotype frequencies, not CMH9 frequencies.
| Phenotype | HPO term | Type | Onset | Course | Frequency (HCM overall) |
|---|---|---|---|---|---|
| Left ventricular hypertrophy (LV wall ≥15 mm adults; z>3 children) | HP:0001712 Left ventricular hypertrophy | Clinical sign / imaging | Adolescence–early adulthood typical; any age | Progressive then plateau | Obligate (defining) |
| Asymmetric septal hypertrophy | HP:0001670 Asymmetric septal hypertrophy | Imaging | as above | Stable/progressive | Most |
| Myocardial sarcomeric (myofibrillar) disarray | HP:0031333 Myocardial sarcomeric disarray | Histologic | — | — | Histological hallmark |
| LV diastolic dysfunction | HP:0025168 Left ventricular diastolic dysfunction | Functional | Early, often pre-hypertrophic | Progressive | Very frequent |
| LV outflow tract obstruction | HP:0031573 Left ventricular outflow tract obstruction | Hemodynamic | Adult | Dynamic/provocable | 25–30% at rest |
| Exertional dyspnea | HP:0002875 Exertional dyspnea | Symptom | Adult | Progressive | Common (leading symptom) |
| Chest pain / angina | HP:0100749 Chest pain | Symptom | Adult | Episodic | Common |
| Palpitations | HP:0001962 Palpitations | Symptom | Adult | Episodic | Common |
| Syncope / presyncope | HP:0001279 Syncope | Symptom | Adolescent–adult | Episodic | Important SCD risk marker |
| Atrial fibrillation | HP:0005110 Atrial fibrillation | Arrhythmia | Adult | Recurrent→permanent | ~60% by age 60 if diagnosed by 40 |
| Ventricular tachycardia | HP:0004756 Ventricular tachycardia | Arrhythmia | Any | Episodic | Substantial minority |
| Sudden cardiac death | HP:0001645 Sudden cardiac death | Outcome | Adolescent–young adult peak | Catastrophic | ~6% of cohorts experience SCD/aborted arrest/appropriate ICD therapy; HCM = 5–14% of SCD in competitive athletes |
| Systolic dysfunction / "burnt-out" end-stage phase | HP:0001635 Congestive heart failure; HP:0012722? (use HP:0005162 Abnormal left ventricular function) | Clinical | Late | Progressive | LV systolic dysfunction ~8% |
| Myocardial fibrosis (LGE on CMR) | HP:0001637 Abnormal myocardium morphology (no precise HP term for LGE) | Imaging/histology | Mid | Progressive | Common; prognostic |
| Mitral regurgitation (SAM-mediated) | HP:0001653 Mitral regurgitation | Clinical | Adult | Dynamic | Common in obstructive HCM |
| Elevated NT‑proBNP / troponin | HP:0031185 Abnormal circulating creatine kinase?—prefer LOINC (NT‑proBNP LOINC:33762‑6; hs‑cTnT LOINC:67151‑1) | Laboratory | — | — | Common; prognostic |
Quality-of-life impact. No CMH9-specific QoL data. In HCM generally, exertional dyspnea, chest pain and fatigue drive impairment; the SEQUOIA‑HCM aficamten trial used the Kansas City Cardiomyopathy Questionnaire (KCCQ) and pVO₂ as functional endpoints, with ~60% of aficamten-treated vs 24% of placebo patients improving NYHA class. Additional QoL burdens: exercise restriction counselling, ICD-related anxiety, and cascade-screening implications for relatives. Instruments in use: KCCQ, SF‑36, EQ‑5D, HCM Symptom Questionnaire (HCMSQ).
Severity/progression descriptors (HCM parent). Severity: variable, from lifelong asymptomatic to end-stage HF. Progression: slow and progressive with an episodic arrhythmic overlay. Penetrance 50–62% in P/LP heterozygotes, gene-dependent (~32% MYL3 to ~69% ACTC1) (PMID:20301725). None of these figures has ever been measured for TTN carriers.
TTN (titin), HGNC:12403, OMIM *188840, 2q31.2, UniProt Q8WZ42. Encodes the giant sarcomeric filament spanning the half-sarcomere from Z‑disc to M‑band (>1 µm), 3–4.2 MDa depending on splice isoform (N2B, N2BA, novex isoforms). Functional segments: Z‑disc (Z‑repeats binding α‑actinin, telethonin/TCAP anchoring), I‑band (elastic spring: tandem Ig, N2B/N2BA, PEVK), A‑band (super-repeats binding myosin/MyBP‑C), M‑band (titin kinase domain, MURF1/MURF2 binding, obscurin/myomesin interface).
GO annotations to use: GO:0008307 structural constituent of muscle; GO:0042805 actinin binding; GO:0031430 M band; GO:0030018 Z disc; GO:0030016 myofibril; GO:0055003 cardiac myofibril assembly; GO:0016567 protein ubiquitination; GO:0014898 cardiac muscle hypertrophy in response to stress.
| Variant | HGVS | Location | Reported | Evidence | ClinVar |
|---|---|---|---|---|---|
| p.Arg740Leu | NM_001267550.2:c.2219G>T; NP_001254479.2:p.Arg740Leu; NC_000002.12:g.178785999C>A; rs28933405 | Z‑disc Z‑repeat region | Satoh 1999, 1 proband/82 (PMID:10462489) | Absent from >500 normal chromosomes; ↑α‑actinin binding (~40%) in yeast two‑hybrid | VCV000012649, "Pathogenic", review status 0 stars — "no assertion criteria provided", single OMIM submission, last evaluated 1999‑08‑27; no population frequency displayed |
| p.Ser30186Ala | exon 301, TCT→GCT | Ig domain near M‑line/A‑band transition | Medaka/human study (PMID:31628103), 96 familial HCM probands | ↑MURF1 binding; ↑ubiquitin-mediated titin degradation (IN_VITRO) | — |
| p.Asp30994Asn | exon 306, GAT→AAT | Ig domain within the MURF1‑binding site | same | same | — |
| p.Arg6745Cys | c.20233C>T, exon 80 | I‑band region | Chinese family, WES, Int J Gen Med 2025 (PMID:39895828) | Present in affected relatives, absent in healthy relatives except one young child | Novel; classification not established |
Critical caveat on the R740L ClinVar record: its "Pathogenic" label is a 0‑star OMIM-derived assertion from 1999 predating ACMG/AMP criteria. Under ACMG/AMP 2015 rules the variant would today, at best, be a VUS: PS3 is weak (yeast two‑hybrid interaction assay, not a disease-relevant functional readout), PM2 support was "absent from 500 chromosomes" (not gnomAD-scale), and there is no PP1 segregation and no PS4 case-control enrichment. gnomAD frequency is not displayed on the ClinVar record and could not be retrieved programmatically for this report — flag as a gap to fill before curating any allele-frequency claim.
mechanistic_hypotheses groups.TTNtv frequencies: DCM 27% vs HCM 1% vs controls 3% (PMID:22335739); HCM 2.5% vs controls 2.6% (PMID:28822653). PSI/exon-usage analysis (PMID:25589632) established that only constitutively expressed (high‑PSI) A‑band TTNtv are DCM-relevant — "the most common genetic cause of DCM in ambulant patients in the community." The ClinGen panel found the only truncating-type HCM case evidence to be one A‑band frameshift (PSI 100%) and one I‑band termination (PSI 100%) — two isolated observations against a high background rate.
Wang et al. 2017 (PMID:28822653): among 529 HCM patients, TTNtv carriers had cardiovascular death in 3/13 (23.1%) vs 39/516 (7.6%) in non-carriers, adjusted HR 6.88 (95% CI 2.04–23.20; P=0.002). Authors: "Our study suggests that TTNtv might be a genetic modifier of HCM and confers increased risk for cardiovascular death." Single cohort, 3 events, unreplicated. Curate as CONTROVERSY, not as a causal mechanism. Note the logical structure: TTN can be simultaneously (a) not an HCM gene and (b) a prognostic modifier within HCM.
[HYPOTHETICAL, MOLECULAR]
Rare heterozygous TTN missense variant in a sarcomere-negative HCM patient
│ (ascertainment: residual, gene-elusive HCM — candidate-gene design)
├──► HYPOTHESIS A (Z-disc): ↑ titin Z-repeat binding to α-actinin (~40%, Y2H)
│ └─► perturbed Z-disc assembly / Z-disc mechanosensing [UNBRIDGED]
│ └─► ??? ─────────────────────────┐
└──► HYPOTHESIS B (M-line): ↑ titin Ig-domain binding to MURF1 │
└─► ↑ ubiquitin-mediated titin degradation │
└─► M-line disassembly, fewer myofibrils, │
stiffer (N2B-shifted) titin isoforms [fish] │
└─► ??? ────────────────────────────────► │
▼
[TISSUE] Hypertrophic remodeling of the LV
(wall thickening + myocyte disarray +
impaired diastolic filling)
│
▼
Generic HCM downstream cascade
(see kb/modules/cardiomyopathy_maladaptive_remodeling)
The step marked ??? is entirely unbridged in both hypotheses. No intermediate signalling has been demonstrated linking either binding perturbation to a hypertrophic transcriptional program in human cardiomyocytes.
Titin's N‑terminus spans the Z‑disc; the central Z‑repeats bind the C‑terminal calmodulin-like domain of α‑actinin‑2 (ACTN2), anchoring the filament and creating a mechanosensing hot spot. Arg740 lies in this Z‑repeat region. The 1999 claim is that a ~40% affinity increase alters Z‑disc assembly or mechanotransduction.
Evidence base: one yeast two-hybrid experiment. No cardiac cell, tissue, or animal data for this variant. Independent support that Z‑disc/α‑actinin‑2 disruption can cause human myocardial mechanical dysfunction exists (e.g., Circ Heart Fail/PMC10572656, "Disruption of Z‑Disc Function Promotes Mechanical Dysfunction in Human Myocardium: Evidence for a Dual Myofilament Modulatory Role by Alpha‑Actinin 2"), and ACTN2 itself is a ClinGen-recognised HCM gene — but that supports the pathway's plausibility, not this variant's causality. Notably, Herman 2012 found DCM-associated truncations were absent from the Z‑disc region, and Bos 2006 found nothing at all when directly resequencing the Z‑disc-encoding exons in 389 HCM patients.
GO: GO:0042805 actinin binding (modifier INCREASED); GO:0030018 Z disc; GO:0055003 cardiac myofibril assembly.
The titin M‑band harbours the titin kinase domain, now understood to be a catalytically inactive pseudokinase scaffold that recruits the E3 ubiquitin ligases MURF1 (TRIM63) and MURF2, coupling sarcomeric mechanics to ubiquitin-dependent turnover and myofibril trophicity (Bogomolovas et al., Open Biol 2014;4:140041, doi:10.1098/rsob.140041). TRIM63 is itself a recognised HCM-associated gene.
The medaka non‑spring heart (nsh) mutant carries an Ig-domain missense (D23186V, exon 204) at the M‑line/A‑band transition (PMID:31628103, Dis Model Mech 12:dmm041103):
"The nsh homozygotes had fewer myofibrils, disrupted sarcomeres and expressed pathologically stiffer titin isoforms. In addition, the nsh heterozygotes showed M‑line disassembly that is similar to the pathological changes found in HCM." (MODEL_ORGANISM)
"Screening of mutations in 96 unrelated patients with familial HCM, who had no previously implicated mutations in known sarcomeric gene candidates, identified two mutations in Ig domains close to the M‑line region of titin. In vitro studies revealed that the mutations found both in medaka fish and in familial HCM increased binding of titin to muscle‑specific ring finger protein 1 (MURF1) and enhanced titin degradation by ubiquitination. These findings implicate an impaired interaction between titin and MURF1 as a novel mechanism underlying the pathogenesis of HCM." (IN_VITRO + MODEL_ORGANISM)
Mechanistic details from the full text: atrial systolic/diastolic velocities fell from ~183 µm/s (WT) to ~64 µm/s (nsh); N2B (stiff) isoform expression increased, i.e., reduced elasticity and increased passive stiffness — a biophysically coherent route to diastolic dysfunction; MURF1/MURF2 catalysed multi-ubiquitination of the titin fragment in vitro; mutant constructs showed lower steady-state protein levels. The authors state a key limitation: "since the medaka TTN gene is very large, we were unable to clone the full-length cDNA (~15 kb) to perform the rescue experiments" — the model lacks genetic rescue. The human arm presents family pedigrees, but ClinGen's independent assessment of the total case-level evidence remained Limited.
GO: GO:0016567 protein ubiquitination (INCREASED); GO:0030239 myofibril assembly (DECREASED); GO:0031430 M band; GO:0061077 chaperone-mediated protein folding (n/a); GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process.
Increased sarcomeric energetic cost and Ca²⁺ sensitisation → myocyte hypertrophy and disarray → interstitial and replacement fibrosis → microvascular dysfunction/ischemia → impaired relaxation and elevated filling pressures → LVOT obstruction (± SAM of the mitral valve) → arrhythmogenic substrate → AF, VT, SCD, and in a minority the end-stage systolic ("burnt-out") phase. This is exactly the chain captured by the dismech module cardiomyopathy_maladaptive_remodeling; a conforms_to link from CMH9 is not warranted because the disease-specific edges into that chain are hypothetical.
Organ level
- Primary: heart — UBERON:0000948; specifically left ventricle UBERON:0002084 and interventricular septum UBERON:0002094 (asymmetric septal hypertrophy).
- Secondary: left atrium UBERON:0002079 (dilation, AF substrate); mitral valve UBERON:0002135 (SAM, regurgitation); cardiac conduction system UBERON:0004146; pulmonary circulation (post-capillary pulmonary hypertension); systemic embolic targets — brain UBERON:0000955 (cardioembolic stroke).
- Body systems: cardiovascular primary. Note that titin is also expressed in skeletal muscle UBERON:0001134 — skeletal myopathy is not a feature of CMH9 as reported, but is central to other titinopathies (HMERF, LGMD R10, Salih myopathy) under the shared MONDO parent autosomal dominant titinopathy (MONDO:0100494). No skeletal-muscle phenotype has been described in CMH9 patients.
Tissue / cell level - Cardiac muscle tissue UBERON:0001133 / myocardium UBERON:0002349. - CL:0000746 cardiac muscle cell — the primary affected population; CL:0002548 cardiac fibroblast; CL:0002144 capillary endothelial cell.
Subcellular — GO:0030017 sarcomere, GO:0030018 Z disc, GO:0031430 M band, GO:0030016 myofibril.
Localization / lateralization — Bilateral in the sense of biventricular potential, but the phenotype is characteristically left-sided and regionally asymmetric (basal anteroseptal predominance; apical, midventricular, and concentric variants occur). Right ventricular involvement is possible but secondary. Use HP:0001670 (asymmetric septal hypertrophy) to capture asymmetry.
Onset. No CMH9-specific onset data (n≈4 reported probands). HCM parent phenotype: onset typically adolescence or early adulthood, but ranges from infancy to the eighth decade; onset is insidious, detected on screening ECG/echo or after a symptomatic/arrhythmic event. HPO onset terms: HP:0003581 Adult onset / HP:0011462 Young adult onset / HP:0003621 Juvenile onset (choose per case; for CMH9 the honest annotation is variable/unknown).
Progression / staging. Recognised HCM stages: (1) genotype‑positive/phenotype‑negative (subclinical; may show impaired relaxation, ECG changes, crypts before hypertrophy); (2) classic phenotype with preserved EF ± obstruction; (3) adverse remodelling with AF, progressive fibrosis, worsening diastolic failure; (4) end-stage/"burnt-out" with systolic dysfunction (~8% of cohorts) requiring advanced therapies. Rate is slow and variable over decades, punctuated by episodic arrhythmic events. Duration: chronic, lifelong (HP:0003679 progressive; HP:0003676 progressive disorder).
Patterns. No spontaneous remission. Treatment-induced symptomatic remission is achievable (myectomy, alcohol septal ablation, cardiac myosin inhibitors) but does not reverse the genotype; regression of hypertrophy with myosin inhibitors is partial and drug-dependent. Critical periods: adolescence/young adulthood (peak SCD risk, athletic exposure) and the period around phenotype conversion in genotype-positive relatives — the rationale for serial screening every 1–2 years (see §13).
CMH9-specific: unquantifiable. Cumulative published cases ≈ 4 probands worldwide (1 Japanese in 1999; 2 Japanese in 2019; 1 Chinese family in 2025). Appropriate prevalence_class: CASES_IN_LITERATURE with measure_type: CASES_IN_LITERATURE and a note that the entity's validity is disputed. Do not assign a numeric rate.
HCM parent phenotype (for context only): - Classic estimate 1 in 500 (~200 per 100,000) from echocardiographic screening (CARDIA). - Contemporary US administrative-claims estimate (JACC: Advances 2025, "Epidemiology of Hypertrophic Cardiomyopathy in the United States From 2016 to 2023"): 1 in 327, ~832,956 US cases — higher than classic estimates, reflecting ascertainment and awareness. - Range across literature 1:500–1:3,000 depending on method; genotype-based estimates (P/LP variant carriage) suggest higher latent carriage with incomplete penetrance.
PARTIAL, inherited from HCM generally rather than demonstrated for TTN.There is no CMH9-specific diagnostic test or pathway. Diagnosis is (1) diagnose HCM, then (2) genotype — and the TTN finding, if any, is currently not reportable as causal.
| Modality | Findings | Codes |
|---|---|---|
| Transthoracic echocardiography (first-line) | LV wall ≥15 mm (adults) or ≥13 mm with family history; z>3 in children; SAM; dynamic LVOT gradient (rest + Valsalva + exercise provocation); diastolic indices | NCIT:C16816 (Echocardiography) |
| Cardiac MRI with LGE | Hypertrophy distribution, apical/mid variants, myocardial fibrosis burden (prognostic), phenocopy discrimination (e.g., amyloid, Fabry) | NCIT:C16809 (Magnetic Resonance Imaging) |
| 12-lead ECG | LVH voltage, repolarisation abnormalities, deep T inversions (apical HCM), pathologic Q waves; often abnormal before hypertrophy | NCIT:C38053 (Electrocardiography) |
| Ambulatory ECG (24–48 h Holter) | NSVT (SCD risk marker), AF detection | NCIT:C38050? — use NCIT:C38053 with modifier |
| Exercise testing / CPET | Functional capacity, pVO₂, exercise-provocable obstruction, blood-pressure response (SCD risk) | NCIT:C38082 (Exercise Stress Test) |
| Biomarkers | NT‑proBNP (LOINC:33762‑6), hs‑troponin T (LOINC:67151‑1) — prognostic, not diagnostic. Rule out phenocopies: α‑galactosidase A activity/GLA for Fabry; serum/urine free light chains + technetium‑pyrophosphate scintigraphy for ATTR amyloid; creatine kinase for Danon/glycogenoses | LOINC as listed |
| Endomyocardial biopsy | Rarely needed; shows myocyte hypertrophy, myofibrillar disarray (HP:0031333), interstitial fibrosis. Used mainly to confirm infiltrative phenocopies | NCIT:C15680 (Biopsy) |
RNA-seq on blood/muscle can resolve splice-impact of candidate TTN variants and is the one omics modality with real utility here. Proteomics, metabolomics, epigenomics, liquid biopsy: no established diagnostic role. Not applicable.
Diagnostic criterion (2024 AHA/ACC): maximal LV wall thickness ≥15 mm in any myocardial segment (or ≥13 mm with a positive family history or positive genotype), by any imaging modality, not explained solely by abnormal loading conditions. Pediatric: z-score >3 (or >2 with family history/genotype).
Differential (all must be excluded): - Hypertensive heart disease, aortic stenosis — loading-condition LVH. - Athlete's heart — concentric mild LVH with increased LV cavity size, normal diastolic function, regression with deconditioning. - Cardiac amyloidosis (ATTR/AL) — low voltage with LVH, apical sparing on strain, positive PYP scan. - Fabry disease (GLA) — low α‑Gal A, prominent inferolateral LGE, extracardiac features. - Danon disease (LAMP2), PRKAG2 glycogen storage — pre-excitation, conduction disease. - RASopathies (Noonan/PTPN11, RAF1, RIT1; Costello) — dysmorphology, pulmonary valve stenosis. - Pompe disease, Friedreich ataxia, desminopathy, mitochondrial cardiomyopathy, Timothy syndrome (CACNA1C).
No CMH9-specific outcome data exist. All figures below are for HCM overall and must be curated as parent-phenotype prognosis.
No CMH9-specific, genotype-directed therapy exists. Management is standard HCM management (2024 AHA/ACC/AMSSM/HRS/PACES/SCMR guideline, PMID:38718139).
| Therapy | Mechanism | Indication | NCIT suggestion |
|---|---|---|---|
| Beta-blockers (metoprolol, bisoprolol, atenolol) | β₁-adrenergic blockade → ↓ contractility, ↓ HR, ↑ diastolic filling | First-line for symptomatic obstructive and non-obstructive HCM | NCIT:C15986 Pharmacotherapy + therapeutic_agent NCIT:C2019 Adrenergic beta-Antagonist |
| Non-dihydropyridine CCBs (verapamil, diltiazem) | L-type Ca²⁺ channel blockade | Beta-blocker intolerance/failure; avoid in severe obstruction + hypotension | NCIT:C15986 + CHEBI:9948 verapamil |
| Disopyramide | Class Ia antiarrhythmic, negative inotrope | Add-on for refractory obstruction (with AV-nodal blocker) | NCIT:C15986 + CHEBI:4657 disopyramide |
| Mavacamten | First-in-class cardiac myosin inhibitor; reduces actin–myosin cross-bridge formation → ↓ hypercontractility, ↓ LVOT gradient | Symptomatic obstructive HCM (FDA 2022); REMS due to systolic-dysfunction risk | NCIT:C15986 + NCIT term for mavacamten; therapeutic_modality: SMALL_MOLECULE |
| Aficamten (MYQORZO) | Allosteric, reversible cardiac myosin inhibitor | Symptomatic obstructive HCM — FDA approved 2025, EU February 2026; based on phase 3 SEQUOIA‑HCM (NCT05186818): ~60% vs 24% placebo improved NYHA class; Boxed Warning for heart failure; MYQORZO REMS. (Aficamten: First Approval, PMID:41941083) | NCIT:C15986 + therapeutic_modality: SMALL_MOLECULE |
| Oral anticoagulation (DOAC preferred) | Thromboembolism prevention | Any AF in HCM, regardless of CHA₂DS₂‑VASc | NCIT:C15986 |
| Antiarrhythmics (amiodarone, sotalol) | Rhythm control | AF/VT | NCIT:C15986 |
| Diuretics (cautious) | Preload reduction | Congestion in non-obstructive HCM; caution in obstruction | NCIT:C15986 |
Avoid: pure vasodilators (nitrates, dihydropyridines), high-dose diuretics, digoxin, and positive inotropes in obstructive physiology.
Pharmacogenomics: mavacamten is a CYP2C19 substrate — dosing and titration are CYP2C19-phenotype-informed (poor metabolisers require dose caps); aficamten has a less CYP2C19-dependent profile. No TTN-genotype-directed pharmacogenomics exists. PharmGKB/CPIC have no CMH9 entry.
therapeutic_modality: DEVICE).Symptom-directed care; moderate-intensity exercise is now endorsed (a change from historical blanket restriction), with shared decision-making for competitive/high-intensity sport; cardiac rehabilitation (NCIT:C15315 Rehabilitation); genetic counselling (NCIT:C15240); pre-conception and prenatal counselling.
No trial has ever enrolled by TTN genotype in HCM. Relevant HCM trials: SEQUOIA‑HCM (NCT05186818, aficamten, completed), MAPLE‑HCM (aficamten monotherapy vs metoprolol), ACACIA‑HCM (non-obstructive HCM), ODYSSEY‑HCM, VALOR‑HCM (mavacamten vs septal reduction therapy), and the MYBPC3 gene-therapy programs. Any clinical_trials block for CMH9 must be annotated as parent-phenotype trials, not CMH9-specific.
Algorithm: confirm HCM and exclude phenocopies → risk-stratify for SCD (ICD decision) → if obstructive and symptomatic: beta-blocker → ±verapamil/disopyramide → cardiac myosin inhibitor (mavacamten or aficamten, with echo surveillance and REMS) → septal reduction therapy if refractory. If non-obstructive: symptom-directed HF therapy, AF management, transplant evaluation at end stage. Genotype currently informs family screening, not drug choice — and a TTN variant informs neither.
| Model | Type | Construct | Recapitulation | Limitations | Resource |
|---|---|---|---|---|---|
| Medaka non‑spring heart (nsh) — Oryzias latipes | Vertebrate, in vivo | ENU/positional-cloned missense D23186V, exon 204, Ig domain at M‑line/A‑band transition | The only in vivo model of a CMH9-type allele. Homozygotes: fewer myofibrils, disrupted sarcomeres, stiffer (N2B-shifted) titin isoforms, atrial velocities ↓ from ~183 to ~64 µm/s. Heterozygotes: M‑line disassembly "similar to the pathological changes found in HCM" | No genetic rescue ("we were unable to clone the full-length cDNA (~15 kb) to perform the rescue experiments"); fish two-chambered heart; homozygous phenotype is largely hypoplastic/dysmorphic rather than hypertrophic in the mammalian sense; the human variants tested are different residues from the fish one | PMID:31628103 (Dis Model Mech 2019); bioRxiv 680579; PMC6899042 |
| Ttn knock-in / truncation mice | Mammalian, in vivo | M‑line/other targeted alleles; heterozygous truncations | Homozygotes die ~E9.0 with severe sarcomere-assembly defects; heterozygotes normal at baseline but develop DCM under angiotensin II/isoproterenol, and maladaptive hypertrophy under transverse aortic constriction (PMID:26504781) | Models DCM, not CMH9. Load-dependent hypertrophy in a TTNtv mouse is not evidence for TTN-HCM | MGI (MGI:98864), IMSR, IMPC |
| MURF1/Trim63 knockout mouse | Mammalian, in vivo | Constitutive KO | Exaggerated cardiac hypertrophy after pressure overload — establishes MURF1 as a brake on hypertrophic growth, supporting the pathway invoked by Hypothesis B | Pathway-level plausibility only; not a TTN-variant model | MGI |
| Yeast two-hybrid titin–α‑actinin assay | In vitro | Z‑repeat fragment + α‑actinin CaM-like domain | The entire experimental basis of Hypothesis A (~40% affinity increase for R740L) | Heterologous, non-cardiac, interaction-only; no functional or cellular readout | PMID:10462489 |
| In vitro MURF1 binding + ubiquitination assays | In vitro | Recombinant titin Ig fragments + MURF1/MURF2 | Increased MURF1 binding, multi-ubiquitination, reduced mutant protein levels | Fragment-based; does not establish myocardial consequence | PMID:31628103 |
| Human iPSC-derived cardiomyocytes (isogenic) | In vitro, human | Does not yet exist for CMH9 alleles | — | — | This is the single highest-value missing experiment (see below) |
Overall model-system verdict: CMH9 has no mammalian genetic model, no genetic rescue in the one model that exists, and no human-cell model. In dismech terms, this warrants a HUMAN_MODEL_MISMATCH discussion alongside the KNOWLEDGE_GAP: evidence exists (medaka, yeast two-hybrid), but its translational validity to human HCM is precisely the unresolved question.
Open question 1 (KNOWLEDGE_GAP): Is TTN a hypertrophic cardiomyopathy gene at all, or should CMH9 be retired as a disease entity?
What is missing is a specific evidence class: large-cohort, region-stratified case-control burden testing of rare TTN missense variation (Z‑disc / I‑band / A‑band / M‑band strata) in HCM against gnomAD-scale controls, plus segregation in multiplex families. Note that truncating-variant burden has already been tested and is negative — the burden question that remains open is missense-specific, and it has not been properly asked. Proposed experiments:
Open question 2 (CONTROVERSY): If TTN does not cause HCM, do TTNtv nonetheless modify outcome within established HCM? The two claims are logically separable and the evidence points in opposite directions: prevalence data argue against causation, while the same cohort reports adjusted HR 6.88 for cardiovascular death (PMID:28822653; 3 deaths among 13 carriers, unreplicated). Resolution requires replication in an independent, ancestrally distinct HCM cohort with adequate event numbers — e.g., within SHaRe or a national registry with linked TTN sequencing.
Curation guard (Named Entity Confusion risk — high). TTN's dominant, well-validated cardiomyopathy association is with dilated cardiomyopathy (MONDO:0005021; ClinGen Definitive; TTNtv in ~25% of familial DCM). That literature is an order of magnitude larger than the HCM literature and is trivially easy to import by mistake — including via search engines and deep-research tools that will happily return DCM content for a "TTN cardiomyopathy" query. Every claim in a CMH9 entry must be checked against the question: does this source's cohort have hypertrophic, or dilated, cardiomyopathy?
| PMID / ID | Citation | Evidence source | Use |
|---|---|---|---|
| 10462489 | Satoh M, et al. Structural analysis of the titin gene in hypertrophic cardiomyopathy: identification of a novel disease gene. Biochem Biophys Res Commun 1999;262:411‑7 | HUMAN_CLINICAL + IN_VITRO | Founding CMH9 report; R740L; α‑actinin binding |
| 31628103 | Perturbation of the titin/MURF1 signaling complex is associated with hypertrophic cardiomyopathy in a fish model and in human patients. Dis Model Mech 2019;12:dmm041103 | MODEL_ORGANISM + IN_VITRO + HUMAN_CLINICAL | Medaka nsh; 2 human M‑line Ig variants; MURF1 |
| 22335739 | Herman DS, et al. Truncations of titin causing dilated cardiomyopathy. N Engl J Med 2012;366:619‑28 | HUMAN_CLINICAL | TTNtv: DCM 27% vs HCM 1% vs controls 3%; Z‑disk/M‑band absence |
| 28822653 | Titin-truncating variants increase the risk of cardiovascular death in patients with hypertrophic cardiomyopathy. Can J Cardiol 2017;33:1292‑7 | HUMAN_CLINICAL | TTNtv 2.5% HCM vs 2.6% controls; modifier HR 6.88 |
| 16352453 | Bos JM, et al. Genotype-phenotype relationships involving HCM-associated mutations in titin, muscle LIM protein, and telethonin. Mol Genet Metab 2006;88:78‑85 | HUMAN_CLINICAL | "No TTN mutations were detected" in 389 HCM |
| 30681346 | Ingles J, et al. Evaluating the clinical validity of hypertrophic cardiomyopathy genes. Circ Genom Precis Med 2019;12:e002460 | OTHER (expert curation) | 8/33 definitive; 22/33 limited or no evidence |
| 39132495 / doi:10.1016/j.jacc.2024.12.010 | Hespe S, Waddell A, Asatryan B, et al. Genes associated with hypertrophic cardiomyopathy: a reappraisal by the ClinGen HCVD GCEP. JACC 2025;85(7):727‑740 (preprint PMC11312670) | OTHER (expert curation) | TTN 1.2+5.5=6.7 → Limited; PSI rationale; 29 genes at moderate+ |
CGGV assertion c17e22eb-…-2025-10-28 |
ClinGen: TTN / hypertrophic cardiomyopathy (MONDO:0005045), AD, Limited | OTHER | Authoritative validity call |
CGGV assertion 1ec53217-…-2025-05-30 |
ClinGen: TTN / dilated cardiomyopathy (MONDO:0005021), AD, Definitive | OTHER | Anti-conflation contrast |
| 25589632 | Roberts AM, et al. Integrated allelic, transcriptional, and phenomic dissection of the cardiac effects of titin truncations in health and disease. Sci Transl Med 2015 | HUMAN_CLINICAL + COMPUTATIONAL | PSI framework for TTNtv interpretation |
| 20301725 | Cirino AL, Channaoui N, Ho C. Nonsyndromic Hypertrophic Cardiomyopathy Overview. GeneReviews [updated 2025‑03‑06] | OTHER (review) | HCM clinical characteristics, penetrance, gene table, management. Note: does not list TTN as an HCM gene |
| 38718139 | 2024 AHA/ACC/AMSSM/HRS/PACES/SCMR Guideline for the Management of Hypertrophic Cardiomyopathy. Circulation 2024 | OTHER (guideline) | Diagnosis, risk stratification, treatment, cascade screening |
| 30297972 | Ho CY, et al. Genotype and lifetime burden of disease in hypertrophic cardiomyopathy: insights from SHaRe. Circulation 2018;138:1387‑1398 | HUMAN_CLINICAL | Sarcomere-positive vs -negative outcomes |
| 39895828 | A case study identified a new mutation in the TTN gene for inherited hypertrophic cardiomyopathy. Int J Gen Med 2025 | HUMAN_CLINICAL | Chinese family, TTN c.20233C>T p.R6745C, exon 80 |
| 26504781 | Pressure overload by transverse aortic constriction induces maladaptive hypertrophy in a titin-truncated mouse model. 2015 | MODEL_ORGANISM | DCM/load model — contextual only |
| 41941083 | Aficamten: First Approval. Drugs | OTHER | Aficamten (MYQORZO) FDA 2025 / EU Feb 2026 |
| doi:10.1098/rsob.140041 | Bogomolovas J, et al. Titin kinase is an inactive pseudokinase scaffold that supports MuRF1 recruitment to the sarcomeric M-line. Open Biol 2014;4:140041 | IN_VITRO | Titin kinase–MURF1 scaffold biology |
| doi:10.1016/j.jacadv.2025.102552 | Epidemiology of hypertrophic cardiomyopathy in the United States from 2016 to 2023. JACC: Advances 2025 | HUMAN_CLINICAL | US HCM prevalence 1 in 327 |
| ClinVar VCV000012649 | NM_001267550.2(TTN):c.2219G>T (p.Arg740Leu), rs28933405 | OTHER | 0‑star "Pathogenic", OMIM submission, evaluated 1999‑08‑27 |
| MONDO:0013412 | MONDO ontology record | OTHER | Definition, synonyms, xrefs, logical axioms |
Unresolved retrieval gaps in this report (flagged rather than guessed): (1) gnomAD v4 allele frequency for TTN p.Arg740Leu could not be retrieved programmatically (gnomAD is a client-rendered app; ClinVar shows no frequency) — verify via the gnomAD GraphQL API or browser before curating any frequency claim; (2) the full-text TTN paragraph of the final JACC 2025 reappraisal was accessible only via the medRxiv/PMC preprint — verify wording against the published version before quoting it as an evidence snippet; (3) whether the two 2019 M‑line Ig variants segregated in their families is asserted in that paper's pedigrees but was judged insufficient by ClinGen — read the primary figures before making a segregation claim either way.
Sources: - OMIM #613765 — CMH9 · OMIM *188840 — TTN · Clinical Synopsis 613765 - GTR: Hypertrophic cardiomyopathy 9 (C1861065) · ClinVar VCV000012649 · ClinVar RCV000013484 - ClinGen HCM gene reappraisal (JACC 2025) · preprint PMC11312670 · ClinGen summary page · GenCC TTN–HCM submission - Evaluating the Clinical Validity of HCM Genes (Circ Genom Precis Med 2019) · SHaRe: Genotype and Lifetime Burden of Disease in HCM - Titin/MURF1 medaka + human HCM study (PMC6899042) · PMID 28822653 · Titin-truncated mouse TAC model · Titin kinase pseudokinase / MuRF1 scaffold · α-actinin-2 Z-disc dysfunction in human myocardium - GeneReviews: Nonsyndromic HCM Overview (NBK1768) · 2024 AHA/ACC HCM Guideline · ACC Key Points - US HCM epidemiology 2016–2023 (JACC Advances) · Orphanet: rare hypertrophic cardiomyopathy (ORPHA:217569) · Orphanet: familial isolated HCM (ORPHA:155) - Cytokinetics: FDA approval of MYQORZO (aficamten) · TCTMD coverage · Aficamten: First Approval (PMID 41941083) - TTN A Case Study, Int J Gen Med 2025 (PMID 39895828) · ICD-10-CM I42.1 · ICD-10-CM I42.2 · ICD-11 HCM block