HIDEA syndrome (Hypotonia, Hypoventilation, Impaired Intellectual Development, Dysautonomia, Epilepsy, and Eye Abnormalities) is a severe autosomal recessive neurodevelopmental disorder caused by biallelic loss-of-function variants in P4HTM, encoding the endoplasmic reticulum transmembrane prolyl 4-hydroxylase P4H-TM. The enzyme localizes to the ER membrane with its catalytic domain in the ER lumen and contains a unique EF-hand domain suggesting calcium regulation of enzymatic activity. Loss of P4H-TM leads to dysregulated HIF-1 signaling and calcium dynamics in astrocytes, affecting gliotransmission and central respiratory control circuits.
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name: HIDEA_Syndrome
creation_date: '2025-12-10T21:01:43Z'
updated_date: '2026-02-17T21:53:14Z'
description: HIDEA syndrome (Hypotonia, Hypoventilation, Impaired Intellectual
Development, Dysautonomia, Epilepsy, and Eye Abnormalities) is a severe
autosomal recessive neurodevelopmental disorder caused by biallelic
loss-of-function variants in P4HTM, encoding the endoplasmic reticulum
transmembrane prolyl 4-hydroxylase P4H-TM. The enzyme localizes to the ER
membrane with its catalytic domain in the ER lumen and contains a unique
EF-hand domain suggesting calcium regulation of enzymatic activity. Loss of
P4H-TM leads to dysregulated HIF-1 signaling and calcium dynamics in
astrocytes, affecting gliotransmission and central respiratory control
circuits.
category: Genetic
parents:
- Neurologic Disorder
- Developmental Disorder
- Epileptic Encephalopathy
prevalence:
- population: Global
percentage: Rare
progression:
- phase: Onset
age_range: Infancy
pathophysiology:
- name: P4HTM Gene Loss-of-Function
description: Biallelic loss-of-function variants in P4HTM result in loss of
ER-resident transmembrane prolyl 4-hydroxylase activity. The enzyme contains
an EF-hand domain that allows calcium-dependent regulation of its catalytic
activity, linking the genetic defect to both HIF signaling and calcium
homeostasis pathways.
genes:
- preferred_term: P4HTM
evidence:
- reference: PMID:30940925
reference_title: "Biallelic loss-of-function P4HTM gene variants cause hypotonia, hypoventilation, intellectual disability, dysautonomia, epilepsy, and eye abnormalities (HIDEA syndrome)."
supports: SUPPORT
snippet: Biallelic loss-of-function P4HTM gene variants cause hypotonia,
hypoventilation, intellectual disability, dysautonomia, epilepsy, and eye
abnormalities (HIDEA).
explanation: The foundational paper establishing that biallelic P4HTM
mutations cause HIDEA syndrome.
- name: Dysregulated Astrocyte Calcium Signaling
description: P4H-TM is a regulator of calcium dynamics and gliotransmission in
astrocytes via a HIF-1-dependent mechanism. Loss of P4H-TM impairs
receptor-operated and store-operated calcium entry (ROCE/SOCE), reduces
mitochondrial calcium uptake and ATP production, and attenuates
gliotransmission.
cell_types:
- preferred_term: Astrocyte
term:
id: CL:0000127
label: astrocyte
biological_processes:
- preferred_term: Calcium ion transmembrane transport
term:
id: GO:0070588
label: calcium ion transmembrane transport
- preferred_term: Gliotransmitter secretion
term:
id: GO:0007269
label: neurotransmitter secretion
- name: Central Respiratory Control Dysfunction
description: Loss of P4H-TM leads to impaired central respiratory control,
with hypoventilation and blunted responses to hypoxia. Patients may require
BiPAP support and are at risk for respiratory distress during infections.
cell_types:
- preferred_term: Neuron
term:
id: CL:0000540
label: neuron
biological_processes:
- preferred_term: Regulation of respiratory system process
term:
id: GO:0044065
label: regulation of respiratory system process
- preferred_term: Response to hypoxia
term:
id: GO:0001666
label: response to hypoxia
evidence:
- reference: PMID:30940925
reference_title: "Biallelic loss-of-function P4HTM gene variants cause hypotonia, hypoventilation, intellectual disability, dysautonomia, epilepsy, and eye abnormalities (HIDEA syndrome)."
supports: SUPPORT
snippet: Hypoventilation, obstructive and central sleep apnea, and
dysautonomia were identified as novel features associated with the
phenotype.
explanation: The foundational HIDEA paper identified hypoventilation and
central sleep apnea as core features.
- name: Mitochondrial Dysfunction
description: A subset of HIDEA patients show mitochondrial respiratory chain
complex deficiency in muscle biopsies, suggesting that P4H-TM loss can
affect mitochondrial function.
biological_processes:
- preferred_term: Oxidative phosphorylation
term:
id: GO:0006119
label: oxidative phosphorylation
evidence:
- reference: PMID:30940925
reference_title: "Biallelic loss-of-function P4HTM gene variants cause hypotonia, hypoventilation, intellectual disability, dysautonomia, epilepsy, and eye abnormalities (HIDEA syndrome)."
supports: SUPPORT
snippet: The muscle biopsy of patient 1 showed low activity of mitochondrial
respiratory chain complex III. In addition, the muscle biopsy of patient 2
was suggestive of a mitochondrial, neurometabolic disease.
explanation: Evidence from muscle biopsies showing mitochondrial respiratory
chain deficiency in some HIDEA patients.
phenotypes:
- category: Neurologic
name: Generalized Hypotonia
description: Decreased muscle tone present from infancy, contributing to motor
delays.
frequency: VERY_FREQUENT
diagnostic: true
phenotype_term:
preferred_term: Generalized hypotonia
term:
id: HP:0001290
label: Generalized hypotonia
evidence:
- reference: PMID:30940925
reference_title: "Biallelic loss-of-function P4HTM gene variants cause hypotonia, hypoventilation, intellectual disability, dysautonomia, epilepsy, and eye abnormalities (HIDEA syndrome)."
supports: SUPPORT
snippet: All the patients have hypotonia (N = 13/13), and either
intellectual disability (N = 12/13) or developmental delay
explanation: Hypotonia is present in 100% of HIDEA patients.
- category: Respiratory
name: Central Hypoventilation
description: Reduced ventilation due to impaired central respiratory control,
with blunted responses to hypoxia and hypercapnia. May require BiPAP
support.
frequency: VERY_FREQUENT
diagnostic: true
phenotype_term:
preferred_term: Central hypoventilation
term:
id: HP:0007110
label: Central hypoventilation
evidence:
- reference: PMID:30940925
reference_title: "Biallelic loss-of-function P4HTM gene variants cause hypotonia, hypoventilation, intellectual disability, dysautonomia, epilepsy, and eye abnormalities (HIDEA syndrome)."
supports: SUPPORT
snippet: the common presenting features include strabismus (N = 11/13, 85%),
epilepsy (N = 10/13, 77%), and central or obstructive sleep apnea
explanation: Central or obstructive sleep apnea occurs in most HIDEA
patients.
- category: Developmental
name: Global Developmental Delay
description: Significant delays in motor, speech, and cognitive development
beginning in infancy.
frequency: VERY_FREQUENT
diagnostic: true
phenotype_term:
preferred_term: Global developmental delay
term:
id: HP:0001263
label: Global developmental delay
evidence:
- reference: PMID:30940925
reference_title: "Biallelic loss-of-function P4HTM gene variants cause hypotonia, hypoventilation, intellectual disability, dysautonomia, epilepsy, and eye abnormalities (HIDEA syndrome)."
supports: SUPPORT
snippet: All the patients have hypotonia (N = 13/13), and either
intellectual disability (N = 12/13) or developmental delay
explanation: Global developmental delay is a core feature of the syndrome.
- category: Cognitive
name: Intellectual Disability
description: Cognitive impairment ranging from severe to profound, often with
absent or severely limited speech.
frequency: VERY_FREQUENT
phenotype_term:
preferred_term: Intellectual disability
term:
id: HP:0001249
label: Intellectual disability
evidence:
- reference: PMID:30940925
reference_title: "Biallelic loss-of-function P4HTM gene variants cause hypotonia, hypoventilation, intellectual disability, dysautonomia, epilepsy, and eye abnormalities (HIDEA syndrome)."
supports: SUPPORT
snippet: All the patients have hypotonia (N = 13/13), and either
intellectual disability (N = 12/13) or developmental delay
explanation: Intellectual disability is present in 12 of 13 patients.
- category: Neurologic
name: Epilepsy
description: Seizures in most patients, often beginning in infancy, with EEG
showing multifocal spikes. Multiple seizure types may occur but are often
relatively well-controlled with anticonvulsants.
frequency: FREQUENT
diagnostic: true
phenotype_term:
preferred_term: Seizure
term:
id: HP:0001250
label: Seizure
evidence:
- reference: PMID:30940925
reference_title: "Biallelic loss-of-function P4HTM gene variants cause hypotonia, hypoventilation, intellectual disability, dysautonomia, epilepsy, and eye abnormalities (HIDEA syndrome)."
supports: SUPPORT
snippet: the common presenting features include strabismus (N = 11/13, 85%),
epilepsy (N = 10/13, 77%), and central or obstructive sleep apnea
explanation: Epilepsy is present in 77% of HIDEA patients.
- category: Autonomic
name: Dysautonomia
description: Autonomic dysfunction including temperature dysregulation and
constipation. Some patients show ROHHAD-like features including rapid weight
gain.
frequency: FREQUENT
diagnostic: true
phenotype_term:
preferred_term: Abnormality of the autonomic nervous system
term:
id: HP:0002270
label: Abnormality of the autonomic nervous system
evidence:
- reference: PMID:30940925
reference_title: "Biallelic loss-of-function P4HTM gene variants cause hypotonia, hypoventilation, intellectual disability, dysautonomia, epilepsy, and eye abnormalities (HIDEA syndrome)."
supports: SUPPORT
snippet: Some patients also show dysautonomia, including constipation (N =
6/13, 46%), recurrent hypothermia or hyperthermia (N = 4/13, 31%), and
reduced sweating (N = 2/13, 15%)
explanation: Dysautonomia features including temperature dysregulation and
constipation are present in subsets of HIDEA patients.
- category: Ophthalmologic
name: Abnormal Eye Movements
description: Eye movement abnormalities including rotary nystagmus, exotropia,
and strabismus.
frequency: FREQUENT
phenotype_term:
preferred_term: Strabismus
term:
id: HP:0000486
label: Strabismus
evidence:
- reference: PMID:30940925
reference_title: "Biallelic loss-of-function P4HTM gene variants cause hypotonia, hypoventilation, intellectual disability, dysautonomia, epilepsy, and eye abnormalities (HIDEA syndrome)."
supports: SUPPORT
snippet: the common presenting features include strabismus (N = 11/13, 85%),
epilepsy (N = 10/13, 77%)
explanation: Strabismus is a common feature of HIDEA syndrome.
- category: Ophthalmologic
name: Visual Impairment
description: Visual problems including myopia, hyperopia, astigmatism, optic
atrophy, cortical blindness, or achromic fundi.
frequency: FREQUENT
phenotype_term:
preferred_term: Visual impairment
term:
id: HP:0000505
label: Visual impairment
evidence:
- reference: PMID:30940925
reference_title: "Biallelic loss-of-function P4HTM gene variants cause hypotonia, hypoventilation, intellectual disability, dysautonomia, epilepsy, and eye abnormalities (HIDEA syndrome)."
supports: SUPPORT
snippet: All the patients with P4HTM gene variants have developmental delay
or intellectual disability and visual abnormalities—such as strabismus,
rotating eye movements, nystagmus, or cortical blindness
explanation: Visual abnormalities are part of the eye phenotype in HIDEA.
- category: Motor
name: Gait Disturbance
description: Delayed walking or inability to walk, with unsteady wide-based
gait in those who achieve ambulation.
frequency: FREQUENT
phenotype_term:
preferred_term: Gait disturbance
term:
id: HP:0001288
label: Gait disturbance
- category: Respiratory
name: Recurrent Respiratory Infections
description: Recurrent pneumonia and respiratory distress, likely related to
hypoventilation and aspiration risk.
frequency: FREQUENT
phenotype_term:
preferred_term: Recurrent respiratory infections
term:
id: HP:0002205
label: Recurrent respiratory infections
- category: Skeletal
name: Scoliosis
description: Spinal curvature abnormality developing in some patients.
frequency: OCCASIONAL
phenotype_term:
preferred_term: Scoliosis
term:
id: HP:0002650
label: Scoliosis
- category: Metabolic
name: Obesity
description: Tendency toward obesity, sometimes with rapid weight gain similar
to ROHHAD syndrome.
frequency: OCCASIONAL
phenotype_term:
preferred_term: Obesity
term:
id: HP:0001513
label: Obesity
evidence:
- reference: PMID:30940925
reference_title: "Biallelic loss-of-function P4HTM gene variants cause hypotonia, hypoventilation, intellectual disability, dysautonomia, epilepsy, and eye abnormalities (HIDEA syndrome)."
supports: SUPPORT
snippet: Six patients (N = 6/13, 46%) have a body mass index (BMI) over 25
kg/m2
explanation: Some HIDEA patients have elevated BMI/obesity.
- category: Craniofacial
name: Coarse Facial Features
description: Some patients develop coarse facial features.
frequency: OCCASIONAL
phenotype_term:
preferred_term: Coarse facial features
term:
id: HP:0000280
label: Coarse facial features
genetic:
- name: P4HTM
association: Causative
inheritance:
- name: Autosomal recessive
notes: Biallelic loss-of-function mutations including missense, nonsense, and
frameshift variants. The gene encodes prolyl 4-hydroxylase transmembrane
(P4H-TM), an ER membrane enzyme with roles in hypoxia signaling and calcium
regulation.
evidence:
- reference: PMID:30940925
reference_title: "Biallelic loss-of-function P4HTM gene variants cause hypotonia, hypoventilation, intellectual disability, dysautonomia, epilepsy, and eye abnormalities (HIDEA syndrome)."
supports: SUPPORT
snippet: Variant characterization demonstrates that the variants affect
protein folding by yielding an insoluble protein product.
explanation: The study demonstrated that P4HTM variants cause loss of
function through protein misfolding.
- reference: PMID:25078763
reference_title: "Clinical characterization, genetic mapping and whole-genome sequence analysis of a novel autosomal recessive intellectual disability syndrome."
supports: SUPPORT
snippet: Whole-genome sequencing of one affected individual pinpointed three
genes with potentially protein damaging homozygous sequence changes within
the predisposition locus transketolase (TKT), prolyl 4-hydroxylase
transmembrane (P4HTM), and ubiquitin specific peptidase 4 (USP4).
explanation: Initial identification of P4HTM as a candidate gene for HIDEA
syndrome in a Finnish kindred.
treatments:
- name: Respiratory Support
description: Non-invasive ventilation such as BiPAP may be required for
management of hypoventilation, particularly during sleep or respiratory
infections.
treatment_term:
preferred_term: Respiratory support
term:
id: MAXO:0000950
label: supportive care
- name: Anticonvulsant Therapy
description: Seizures are generally responsive to standard anticonvulsant
medications. Valproate has been noted as potentially beneficial due to its
HIF-1 alpha inhibiting properties.
treatment_term:
preferred_term: Anticonvulsant therapy
term:
id: NCIT:C15986
label: Pharmacotherapy
- name: Physical Therapy
description: Rehabilitation to address hypotonia, motor delays, and gait
abnormalities.
treatment_term:
preferred_term: Physical therapy
term:
id: MAXO:0000011
label: physical therapy
- name: Ophthalmologic Management
description: Regular ophthalmologic evaluation and management of visual
impairments including corrective lenses and treatment of strabismus.
treatment_term:
preferred_term: Ophthalmologic management
term:
id: MAXO:0000950
label: supportive care
disease_term:
preferred_term: HIDEA syndrome
term:
id: MONDO:0032780
label: hypotonia, hypoventilation, impaired intellectual development,
dysautonomia, epilepsy, and eye abnormalities
references:
- reference: DOI:10.1007/s00424-024-02920-5
title: Metabolic characteristics of transmembrane prolyl 4-hydroxylase
(P4H-TM) deficient mice
findings: []
- reference: DOI:10.1038/s41431-021-00932-8
title: Biallelic P4HTM variants associated with HIDEA syndrome and
mitochondrial respiratory chain complex I deficiency
findings: []
- reference: DOI:10.1038/s41436-019-0503-4
title: Biallelic loss-of-function P4HTM gene variants cause hypotonia,
hypoventilation, intellectual disability, dysautonomia, epilepsy, and eye
abnormalities (HIDEA syndrome)
findings: []
- reference: DOI:10.1523/eneuro.0253-20.2020
title: Transmembrane Prolyl 4-Hydroxylase is a Novel Regulator of Calcium
Signaling in Astrocytes
findings: []
- reference: DOI:10.3389/fgene.2023.1137767
title: 'HIDEA syndrome: A new case report highlighting similarities with ROHHAD
syndrome'
findings: []
- reference: DOI:10.3389/fneur.2024.1428076
title: 'Clinical characteristics of patients with P4HTM variant-associated epilepsy
and therapeutic exploration: a case report and literature review'
findings: []
HIDEA syndrome is a severe, autosomal recessive neurodevelopmental disorder caused by biallelic loss-of-function variants in P4HTM, encoding the endoplasmic reticulum (ER) transmembrane prolyl 4-hydroxylase P4H‑TM. Foundational clinical genetics established that “biallelic loss‑of‑function P4HTM gene variants cause hypotonia, hypoventilation, intellectual disability, dysautonomia, epilepsy, and eye abnormalities (HIDEA)” (Genetics in Medicine, Oct 2019; https://doi.org/10.1038/s41436-019-0503-4). Mechanistically, P4H‑TM localizes to the ER membrane with its catalytic domain in the ER lumen and includes a unique EF‑hand domain, suggesting Ca2+ regulation of enzymatic activity and a tight link to ER–calcium signaling. Recent experimental work demonstrated that P4H‑TM is a regulator of astrocyte Ca2+ signaling and gliotransmission via a HIF‑1–dependent mechanism, implicating dysregulated hypoxia signaling in CNS networks that govern respiration and autonomic function (eNeuro, Dec 2021; https://doi.org/10.1523/eneuro.0253-20.2020) (alanisula2024metaboliccharacteristicsof pages 3-6). Complementary in vivo evidence from global P4h‑tm−/− mice shows alterations in whole‑body energy metabolism, neuromuscular weakness, and, critically, a reduced respiratory rate with blunted ventilatory responses to hypoxia and hypercapnia, leading to respiratory acidosis; the authors conclude that these changes “appear to be neurological and controlled by the brain and central nervous system circuits,” recapitulating key human HIDEA features (Pflügers Archiv, Feb 2024; https://doi.org/10.1007/s00424-024-02920-5) (alanisula2024metaboliccharacteristicsof pages 1-2, alanisula2024metaboliccharacteristicsof pages 11-12, alanisula2024metaboliccharacteristicsof pages 7-9, alanisula2024metaboliccharacteristicsof pages 3-6, alanisula2024metaboliccharacteristicsof pages 9-11).
A subset of HIDEA patients show mitochondrial respiratory chain complex I deficiency in muscle biopsies, suggesting that P4H‑TM loss can intersect with mitochondrial function and integrated stress response pathways (e.g., ATF4), potentially downstream of altered HIF signaling and ER–mitochondria Ca2+ crosstalk (Eur J Hum Genet, Jul 2021; https://doi.org/10.1038/s41431-021-00932-8) (wang2024clinicalcharacteristicsof pages 6-7). Clinically, HIDEA overlaps with ROHHAD-like presentations (rapid-onset obesity, hypoventilation, dysautonomia), leading experts to recommend P4HTM sequencing in ROHHAD-suspected cases that also exhibit abnormal neurodevelopment or eye findings (Front Genet, Mar 2023; https://doi.org/10.3389/fgene.2023.1137767) (harvengt2023hideasyndromea pages 5-6).
| Category | Key finding or quote | Molecular/Cellular process implicated | Species / Context | Source (authors, year) | Journal | URL / DOI | Publication date |
|---|---|---|---|---|---|---|---|
| Foundational description | "Biallelic loss-of-function P4HTM gene variants cause hypotonia, hypoventilation, intellectual disability, dysautonomia, epilepsy, and eye abnormalities (HIDEA)" (diagnostic/phenotypic definition) (harvengt2023hideasyndromea pages 5-6) | Genetic loss-of-function in P4HTM → syndromic neurodevelopmental disorder | Human patients / clinical genetics | Rahikkala et al., 2019 | Genetics in Medicine | https://doi.org/10.1038/s41436-019-0503-4 | Oct 2019 |
| Clinical case / phenotype overlap | Case report: clinical similarity between HIDEA and ROHHAD; recommends testing P4HTM in ROHHAD-like cases (harvengt2023hideasyndromea pages 5-6) | Hypothalamic/dysautonomia features; central hypoventilation | Human clinical case series / diagnostic recommendation | Harvengt et al., 2023 | Frontiers in Genetics | https://doi.org/10.3389/fgene.2023.1137767 | Mar 2023 |
| Cellular mechanism (astrocytes) | "P4H-TM is a novel regulator of calcium dynamics and gliotransmission" (HIF1 mediates effect on calcium signaling) (alanisula2024metaboliccharacteristicsof pages 3-6) | Disrupted receptor-/store-operated Ca2+ entry (ROCE/SOCE), mitochondrial Ca2+ uptake, altered ATP; HIF-1α–dependent pathway | Mouse primary astrocytes / cortex (cellular assays) | Byts et al., 2021 | eNeuro | https://doi.org/10.1523/eneuro.0253-20.2020 | Dec 2021 |
| Mitochondrial involvement | Reports of mitochondrial respiratory chain complex I deficiency in some HIDEA patients; ATF4/ISR proposed link (alanisula2024metaboliccharacteristicsof pages 3-6) | Mitochondrial respiratory chain dysfunction, integrated stress response (ATF4) | Human muscle biopsy / clinical case | Hay et al., 2021 | European Journal of Human Genetics | https://doi.org/10.1038/s41431-021-00932-8 | Jul 2021 |
| Mouse model — systemic phenotypes | P4h-tm−/− mice show altered 24-h energy expenditure, lower respiratory rate, blunted hypoxia/hypercapnia responses, neuromuscular weakness — "recapitulates some symptoms of HIDEA" (alanisula2024metaboliccharacteristicsof pages 12-13, alanisula2024metaboliccharacteristicsof pages 11-12) | Altered whole-body energy metabolism, respiratory control, neuromuscular function; CNS-origin hypothesis | Global knockout mouse (P4h-tm−/−) — physiological, metabolic, respiratory assays | Ala‑Nisula et al., 2024 | Pflugers Archiv | https://doi.org/10.1007/s00424-024-02920-5 | Feb 2024 |
| Therapeutics / clinical management | Seizures in P4HTM-associated patients often start in infancy and are relatively controllable; valproate (a HIF‑1α inhibitor) proposed as promising (wang2024clinicalcharacteristicsof pages 6-7) | Pharmacologic HIF‑1α modulation considered (valproate cited) | Human case report + literature review (epilepsy focus) | Wang et al., 2024 | Frontiers in Neurology | https://doi.org/10.3389/fneur.2024.1428076 | Nov 2024 |
| Subcellular localization | P4H-TM is an endoplasmic reticulum (ER) transmembrane prolyl 4‑hydroxylase with its catalytic domain in the ER lumen (alanisula2024metaboliccharacteristicsof pages 1-2) | ER membrane localization → lumenal catalytic activity; potential ER‑related substrates/processes | Biochemical/structural annotation from mouse/human studies | (Ala‑Nisula summary of prior work), 2024 | (summarized in Pflugers Archiv) | https://doi.org/10.1007/s00424-024-02920-5 | Feb 2024 |
| EF‑hand / Ca2+ regulation | "its catalytic activity may be regulated by Ca2+"; P4H‑TM contains a unique EF‑hand adjacent to the dioxygenase domain (alanisula2024metaboliccharacteristicsof pages 1-2) | EF‑hand calcium‑binding domain → Ca2+ modulation of enzymatic activity; links to calcium signaling defects | Structural/functional inference (protein domain and mouse/cell data) | (Ala‑Nisula summary of structural data), 2024 | (summarized in Pflugers Archiv) | https://doi.org/10.1007/s00424-024-02920-5 | Feb 2024 |
Table: Concise, citation-linked summary of mechanistic, clinical, model, localization, and therapeutic evidence for HIDEA syndrome (P4HTM/P4H‑TM) from prioritized 2019–2024 literature; useful as an evidence-annotated quick reference for disease knowledge base entries.
In some patients, mitochondrial complex I deficiency suggests secondary mitochondrial dysfunction and activation of integrated stress response nodes (e.g., ATF4) (EJHG 2021) (wang2024clinicalcharacteristicsof pages 6-7).
Dysregulated molecular pathways:
Potential ER stress/integrated stress response convergence (ATF4) in patient tissues with mitochondrial involvement (wang2024clinicalcharacteristicsof pages 6-7).
Affected cellular processes:
ATF4 (HGNC:785): Integrated stress response factor hypothesized to be involved in patient mitochondrial phenotype (EJHG 2021) (wang2024clinicalcharacteristicsof pages 6-7).
Chemical entities (CHEBI) and relevant metabolites/drugs:
Valproate (CHEBI:39867): Proposed for seizure control; noted HIF‑1α‑inhibiting properties in review context (Front Neurol 2024) (wang2024clinicalcharacteristicsof pages 6-7).
Cell types (CL):
Neurons (CL:0000540): Implicated in central respiratory/autonomic control (inferred from CNS-origin in mouse phenotype) (alanisula2024metaboliccharacteristicsof pages 11-12, alanisula2024metaboliccharacteristicsof pages 9-11).
Anatomical locations (UBERON):
ATF4 (HGNC:785) (wang2024clinicalcharacteristicsof pages 6-7)
GO Biological Processes: calcium ion transmembrane transport; receptor‑operated Ca2+ entry; store‑operated Ca2+ entry; regulation of gliotransmission; response to hypoxia (HIF‑1 signaling); ventilatory response to hypoxia/hypercapnia; glycogen catabolism; mitochondrial electron transport (complex I) (alanisula2024metaboliccharacteristicsof pages 3-6, alanisula2024metaboliccharacteristicsof pages 11-12, alanisula2024metaboliccharacteristicsof pages 7-9, wang2024clinicalcharacteristicsof pages 6-7).
GO Cellular Components: ER membrane/lumen; mitochondrion; synapse; astrocyte processes (alanisula2024metaboliccharacteristicsof pages 1-2, alanisula2024metaboliccharacteristicsof pages 3-6).
CL (Cell types): Astrocytes (CL:0000127); Neurons (CL:0000540) (alanisula2024metaboliccharacteristicsof pages 3-6, alanisula2024metaboliccharacteristicsof pages 11-12).
UBERON (Anatomy): Brain/CNS (UBERON:0000955); medulla (UBERON:0001898); pons (UBERON:0000988); eye (UBERON:0000970); liver (UBERON:0002107) (alanisula2024metaboliccharacteristicsof pages 11-12, alanisula2024metaboliccharacteristicsof pages 7-9, harvengt2023hideasyndromea pages 5-6).
CHEBI (Chemicals): Calcium (CHEBI:29108); Lactate (CHEBI:24996); Insulin (CHEBI:5931); Valproate (CHEBI:39867) (alanisula2024metaboliccharacteristicsof pages 9-11, wang2024clinicalcharacteristicsof pages 6-7, alanisula2024metaboliccharacteristicsof pages 3-6).
HPO (Phenotypes): Hypotonia (HP:0001252); Central hypoventilation (HP:0002875); Intellectual disability (HP:0001249); Dysautonomia (HP:0002279); Epilepsy (HP:0001250); Strabismus (HP:0000486); Retinal hypopigmentation (HP:0007736) (harvengt2023hideasyndromea pages 5-6, wang2024clinicalcharacteristicsof pages 6-7).
References
(alanisula2024metaboliccharacteristicsof pages 3-6): Tuulia Ala-Nisula, Riikka Halmetoja, Henri Leinonen, Margareta Kurkela, Henna-Riikka Lipponen, Samuli Sakko, Mikko Karpale, Antti M. Salo, Niina Sissala, Tapio Röning, Ghulam S. Raza, Kari A. Mäkelä, Jérôme Thevenot, Karl-Heinz Herzig, Raisa Serpi, Johanna Myllyharju, Heikki Tanila, Peppi Koivunen, and Elitsa Y. Dimova. Metabolic characteristics of transmembrane prolyl 4-hydroxylase (p4h-tm) deficient mice. Pflugers Archiv, 476:1339-1351, Feb 2024. URL: https://doi.org/10.1007/s00424-024-02920-5, doi:10.1007/s00424-024-02920-5. This article has 5 citations.
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