Cellulitis is an acute bacterial infection of the deep dermis and subcutaneous tissue, most often a nonpurulent beta-hemolytic streptococcal infection that follows a skin barrier breach and is promoted by chronic edema or lymphatic and venous drainage impairment.
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name: Cellulitis
creation_date: "2026-09-29T18:04:43Z"
description: >-
Cellulitis is an acute bacterial infection of the deep dermis and
subcutaneous tissue, most often a nonpurulent beta-hemolytic streptococcal
infection that follows a skin barrier breach and is promoted by chronic edema
or lymphatic and venous drainage impairment.
category: Infectious Disease
disease_term:
preferred_term: cellulitis
term:
id: MONDO:0005230
label: cellulitis
parents:
- Bacterial infection
synonyms:
- Bacterial cellulitis
- Nonpurulent cellulitis
notes: >-
This entry is scoped to nonpurulent cellulitis as a deep dermal and
subcutaneous infection, distinct from the more superficial Erysipelas entry.
Site-specific named variants (periorbital/preseptal, orbital, and
diabetic-foot cellulitis) are treated as separate named entities and are out
of scope here. Cellulitis is an acquired infection with no RO:0004003 causal
gene on MONDO:0005230, so there are no human disease genes to model.
infectious_agent:
- name: Streptococcus pyogenes
infectious_agent_term:
preferred_term: Streptococcus pyogenes
term:
id: NCBITaxon:1314
label: Streptococcus pyogenes
description: >-
Streptococcus pyogenes is the dominant group A representative of the
beta-hemolytic streptococci that cause nonpurulent cellulitis.
evidence:
- reference: PMID:42727947
reference_title: Advances in the diagnosis and management of skin and soft tissue infections.
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
quote_role: REVIEW_SYNTHESIS
snippet: >-
Non-purulent SSTI is most commonly associated with beta-haemolytic
streptococci, while purulent SSTI is typically associated with
Staphylococcus aureus Cellulitis most commonly presents with acute warmth,
pain, tenderness to palpation, erythema, and oedema.
explanation: >-
This review identifies beta-hemolytic streptococci as the usual microbial
group for nonpurulent cellulitis.
- name: Staphylococcus aureus
infectious_agent_term:
preferred_term: Staphylococcus aureus
term:
id: NCBITaxon:1280
label: Staphylococcus aureus
description: >-
Staphylococcus aureus, including methicillin-resistant strains, is most
relevant when a cellulitis presentation is purulent or accompanied by an
abscess.
evidence:
- reference: PMID:42727947
reference_title: Advances in the diagnosis and management of skin and soft tissue infections.
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
quote_role: REVIEW_SYNTHESIS
snippet: >-
Non-purulent SSTI is most commonly associated with beta-haemolytic
streptococci, while purulent SSTI is typically associated with
Staphylococcus aureus Cellulitis most commonly presents with acute warmth,
pain, tenderness to palpation, erythema, and oedema.
explanation: >-
This review places S. aureus on the purulent end of the cellulitis and
skin-abscess spectrum.
classifications:
harrisons_chapter:
- classification_value: INFECTIOUS_DISEASES
evidence:
- reference: PMID:27864837
reference_title: "Risk factors for nonpurulent leg cellulitis: a systematic review and meta-analysis."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
quote_role: REVIEW_SYNTHESIS
snippet: >-
Nonpurulent cellulitis is an acute bacterial infection of the dermal and
subdermal tissues that is not associated with purulent drainage,
discharge or abscess.
explanation: >-
The systematic review frames cellulitis as an acute bacterial skin and
subcutaneous-tissue infection, supporting Harrison's Infectious Diseases
classification.
transmission:
- name: Entry Through Skin Barrier Breaches
description: >-
Cellulitis is usually seeded when beta-hemolytic streptococci or
Staphylococcus aureus on the skin surface reach normally sterile dermis or
subcutis through a wound, ulcer, excoriating dermatosis, toe-web fissure, or
other epithelial break.
evidence:
- reference: PMID:27864837
reference_title: "Risk factors for nonpurulent leg cellulitis: a systematic review and meta-analysis."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
quote_role: REVIEW_SYNTHESIS
snippet: >-
Clinicians should consider the treatment of modifiable risk factors
including leg oedema, wounds, ulcers, areas of skin breakdown and toe-web
intertrigo while administering antibiotic treatment for NPLC.
explanation: >-
Identifies wounds, ulcers, skin breakdown, and toe-web intertrigo as
modifiable portal-of-entry lesions for nonpurulent leg cellulitis.
pathophysiology:
- name: Skin Barrier Portal of Entry
role: trigger
description: >-
Wounds, ulcers, tinea pedis, toe-web maceration, excoriating dermatoses, or
other breaks in the epidermal barrier create portals through which skin
bacteria can reach the deep dermis and subcutis.
locations:
- preferred_term: skin of body
term:
id: UBERON:0002097
label: skin of body
- preferred_term: dermis
term:
id: UBERON:0002067
label: dermis
cell_types:
- preferred_term: keratinocyte
term:
id: CL:0000312
label: keratinocyte
downstream:
- target: Bacterial Proliferation in Deep Dermis and Subcutis
description: >-
Loss of epithelial integrity lets beta-hemolytic streptococci or
S. aureus seed normally sterile deeper skin and subcutaneous tissue.
evidence:
- reference: PMID:27864837
reference_title: "Risk factors for nonpurulent leg cellulitis: a systematic review and meta-analysis."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
quote_role: REVIEW_SYNTHESIS
snippet: >-
Clinicians should consider the treatment of modifiable risk factors
including leg oedema, wounds, ulcers, areas of skin breakdown and toe-web
intertrigo while administering antibiotic treatment for NPLC.
explanation: >-
This meta-analysis ties multiple portal-of-entry lesions, including
wounds, leg ulcers, excoriating dermatoses, and tinea pedis, to increased
odds of nonpurulent leg cellulitis.
- name: Impaired Lymphatic and Venous Drainage
role: trigger
description: >-
Chronic leg edema, lymphedema, venous insufficiency, obesity, or saphenous
vein harvest impair local fluid clearance and immune surveillance, lowering
the threshold for deep dermal and subcutaneous infection after bacterial
entry.
locations:
- preferred_term: lymphatic vessel
term:
id: UBERON:0001473
label: lymphatic vessel
- preferred_term: hypodermis
term:
id: UBERON:0002072
label: hypodermis
cell_types:
- preferred_term: lymphatic endothelial cell
term:
id: CL:0002138
label: endothelial cell of lymphatic vessel
downstream:
- target: Bacterial Proliferation in Deep Dermis and Subcutis
description: >-
Local stasis creates a permissive tissue context for bacteria introduced
through the skin barrier.
- target: Recurrent Cellulitis Loop
description: >-
Persistent drainage impairment remains after an acute episode and
predisposes the same limb to later cellulitis recurrence.
evidence:
- reference: PMID:27864837
reference_title: "Risk factors for nonpurulent leg cellulitis: a systematic review and meta-analysis."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
quote_role: REVIEW_SYNTHESIS
snippet: >-
Clinicians should consider the treatment of modifiable risk factors
including leg oedema, wounds, ulcers, areas of skin breakdown and toe-web
intertrigo while administering antibiotic treatment for NPLC.
explanation: >-
The review identifies leg edema as a modifiable cellulitis risk factor
alongside barrier-disrupting lesions.
- reference: PMID:29427797
reference_title: "Severe lower limb cellulitis: defining the epidemiology and risk factors for primary episodes in a population-based case-control study."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: >-
several conditions with lower limb pathology were independently associated
with LLC, including varicose veins (AOR 2.95, 95% CI 2.50-3.48, p <
0.001), lymphoedema (AOR 2.65, 95% CI 1.71-4.10, p < 0.001), tinea pedis
(AOR 3.05, 95% CI 1.45-6.42, p 0.003), and saphenous vein harvest during
coronary artery bypass grafting (AOR 1.74, 95% CI 1.32-2.30, p < 0.001).
explanation: >-
A large population-based study links first lower-limb cellulitis episodes
to venous, lymphatic, and surgical drainage-impairment risk factors.
- name: Bacterial Proliferation in Deep Dermis and Subcutis
role: cause
description: >-
Beta-hemolytic streptococci, and S. aureus in purulent presentations,
proliferate in the deep dermis and subcutaneous tissue and expose the host
to Gram-positive pathogen-associated molecular patterns and secreted
virulence factors.
locations:
- preferred_term: dermis
term:
id: UBERON:0002067
label: dermis
- preferred_term: hypodermis
term:
id: UBERON:0002072
label: hypodermis
biological_processes:
- preferred_term: defense response to Gram-positive bacterium
modifier: INCREASED
term:
id: GO:0050830
label: defense response to Gram-positive bacterium
downstream:
- target: Innate Inflammatory Edema and Cellulitis Plaque
description: >-
Local bacterial growth and recognition of Gram-positive microbial products
recruit neutrophils and inflammatory cytokine signaling.
evidence:
- reference: PMID:42727947
reference_title: Advances in the diagnosis and management of skin and soft tissue infections.
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
quote_role: REVIEW_SYNTHESIS
snippet: >-
Skin and soft tissues infections (SSTIs) are common conditions, affecting
millions worldwide. SSTIs range from uncomplicated cellulitis to
necrotizing fasciitis and can be divided into non-purulent and purulent
forms.
explanation: >-
This review places uncomplicated cellulitis in the skin and soft-tissue
infection spectrum.
- name: Streptolysin S-Amplified Streptococcal Cytotoxicity
role: modifier
description: >-
In hypervirulent group A Streptococcus, covR mutant derepression of the
cytolytic peptide streptolysin S increases keratinocyte and macrophage death
and augments interleukin-1 beta release, enlarging local soft-tissue
lesions in a mouse subcutaneous infection model.
locations:
- preferred_term: dermis
term:
id: UBERON:0002067
label: dermis
cell_types:
- preferred_term: keratinocyte
term:
id: CL:0000312
label: keratinocyte
- preferred_term: macrophage
term:
id: CL:0000235
label: macrophage
biological_processes:
- preferred_term: interleukin-1 beta production
modifier: INCREASED
term:
id: GO:0032611
label: interleukin-1 beta production
downstream:
- target: Innate Inflammatory Edema and Cellulitis Plaque
description: >-
Toxin-amplified host-cell death intensifies local tissue injury and
cytokine-driven innate inflammation.
evidence:
- reference: PMID:41175456
reference_title: Differential expression profile of streptolysin S in the covR and covS mutants of group A Streptococcus is a mediator of keratinocyte death and aggressive local infection.
supports: SUPPORT
evidence_source: MODEL_ORGANISM
snippet: >-
Moreover, SLS in the ∆covR mutant contributed to increased macrophage cell
death and elevated IL-1β levels.
explanation: >-
The model directly links streptolysin S to macrophage death and IL-1 beta
induction in a group A streptococcal subcutaneous-infection context.
- reference: PMID:41175456
reference_title: Differential expression profile of streptolysin S in the covR and covS mutants of group A Streptococcus is a mediator of keratinocyte death and aggressive local infection.
supports: SUPPORT
evidence_source: MODEL_ORGANISM
snippet: >-
In a mouse subcutaneous infection model, the SLS-deficient ∆covR
mutant exhibited reduced lesion size and mortality compared to the
∆covR mutant
explanation: >-
Loss of SLS reduced lesion size and mortality relative to covR mutant GAS,
supporting a causal role for SLS in aggressive local soft-tissue injury.
- name: Innate Inflammatory Edema and Cellulitis Plaque
role: outcome
description: >-
Acute innate inflammation in infected deep dermis and subcutis increases
vascular permeability, edema, and local nociceptor activation, creating the
poorly demarcated unilateral erythema, warmth, swelling, pain, and
tenderness that define cellulitis clinically.
locations:
- preferred_term: dermis
term:
id: UBERON:0002067
label: dermis
- preferred_term: hypodermis
term:
id: UBERON:0002072
label: hypodermis
cell_types:
- preferred_term: neutrophil
term:
id: CL:0000775
label: neutrophil
biological_processes:
- preferred_term: inflammatory response
modifier: INCREASED
term:
id: GO:0006954
label: inflammatory response
downstream:
- target: Poorly demarcated erythema
description: >-
Increased dermal vascular permeability and inflammatory hyperemia produce
the cardinal acute erythema of the cellulitis plaque.
- target: Localized edema
description: >-
Increased vascular permeability drives fluid extravasation into the
involved skin and subcutis, producing the swollen plaque.
- target: Localized pain and tenderness
description: >-
Local nociceptor activation by inflammatory mediators produces the pain
and tenderness to palpation of the affected area.
evidence:
- reference: PMID:42727947
reference_title: Advances in the diagnosis and management of skin and soft tissue infections.
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
quote_role: REVIEW_SYNTHESIS
snippet: >-
Cellulitis most commonly presents with acute warmth, pain, tenderness to
palpation, erythema, and oedema.
explanation: >-
The review lists the acute inflammatory signs that constitute the
cellulitis presentation.
- name: Recurrent Cellulitis Loop
role: outcome
description: >-
After an initial lower-extremity cellulitis episode, residual lymphatic or
edema-promoting tissue damage keeps the affected limb in a high-risk state,
making recurrence the strongest predictor of later recurrence.
locations:
- preferred_term: lymphatic vessel
term:
id: UBERON:0001473
label: lymphatic vessel
downstream: []
evidence:
- reference: PMID:27864837
reference_title: "Risk factors for nonpurulent leg cellulitis: a systematic review and meta-analysis."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
quote_role: REVIEW_SYNTHESIS
snippet: >-
An increased risk of developing NPLC was associated with previous
cellulitis [odds ratio (OR) 40.3, 95% confidence interval (CI)
22.6-72.0]
explanation: >-
The meta-analysis quantifies previous cellulitis as by far the strongest
risk factor for a further episode, supporting a self-reinforcing
recurrence loop in the affected limb.
phenotypes:
- category: Skin
name: Poorly demarcated erythema
description: >-
Acute erythema overlying the infected deep dermis and subcutis is one of
the cardinal local signs of cellulitis.
phenotype_term:
preferred_term: Erythema
term:
id: HP:0010783
label: Erythema
evidence:
- reference: PMID:42727947
reference_title: Advances in the diagnosis and management of skin and soft tissue infections.
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
quote_role: REVIEW_SYNTHESIS
snippet: >-
Cellulitis most commonly presents with acute warmth, pain, tenderness to
palpation, erythema, and oedema.
explanation: >-
The review names erythema as a common cellulitis sign.
- category: Skin
name: Localized edema
description: >-
Edema of the involved skin and subcutaneous tissue contributes to the
swollen cellulitis plaque.
phenotype_term:
preferred_term: Edema
term:
id: HP:0000969
label: Edema
evidence:
- reference: PMID:42727947
reference_title: Advances in the diagnosis and management of skin and soft tissue infections.
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
quote_role: REVIEW_SYNTHESIS
snippet: >-
Cellulitis most commonly presents with acute warmth, pain, tenderness to
palpation, erythema, and oedema.
explanation: >-
The review names edema as a common cellulitis sign.
- category: Skin
name: Localized pain and tenderness
description: >-
Pain and tenderness to palpation over the involved skin are among the most
common presenting signs of cellulitis.
phenotype_term:
preferred_term: Pain
term:
id: HP:0012531
label: Pain
evidence:
- reference: PMID:42727947
reference_title: Advances in the diagnosis and management of skin and soft tissue infections.
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
quote_role: REVIEW_SYNTHESIS
snippet: >-
Cellulitis most commonly presents with acute warmth, pain, tenderness to
palpation, erythema, and oedema.
explanation: >-
The review names pain and tenderness to palpation among the most common
cellulitis presenting signs.
diagnosis:
- name: Clinical Diagnosis with Abscess and Mimic Exclusion
description: >-
Cellulitis is diagnosed clinically from unilateral erythema, warmth, edema,
and tenderness, with bedside imaging or consultation used selectively to
exclude abscess, deep infection, or common noninfectious mimics.
evidence:
- reference: PMID:42727947
reference_title: Advances in the diagnosis and management of skin and soft tissue infections.
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
quote_role: REVIEW_SYNTHESIS
snippet: >-
Laboratory testing is of limited use in most patients. Point-of-care
ultrasound is useful for distinguishing cellulitis from abscess if the
diagnosis is unclear.
explanation: >-
The review supports a primarily clinical diagnosis while identifying
ultrasound as a selective discriminator from abscess.
- reference: PMID:27806170
reference_title: Costs and Consequences Associated With Misdiagnosed Lower Extremity Cellulitis.
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: >-
Inflammatory dermatoses of the lower extremity are often misdiagnosed as
cellulitis (aka "pseudocellulitis") and treated with antibiotics and/or
hospitalization.
explanation: >-
Misdiagnosis of lower-extremity inflammatory dermatoses supports explicit
exclusion of noninfectious cellulitis mimics.
- reference: PMID:30914341
reference_title: The ALT-70 cellulitis model maintains predictive value at 24 and 48 hours after presentation.
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: >-
The ALT-70 predictive model offers an objective tool to help differentiate
between cellulitis and other clinically similar conditions at the time of
initial emergency department (ED) presentation.
explanation: >-
The ALT-70 model is a validated bedside score for distinguishing true
lower-extremity cellulitis from its mimics at presentation.
treatments:
- name: Acute Antibiotic Therapy for Nonpurulent Cellulitis
description: >-
Empiric oral beta-lactam therapy such as cephalexin targets the
beta-hemolytic streptococci presumed to cause uncomplicated nonpurulent
cellulitis, with MRSA-active coverage reserved for selected purulent or
risk-enriched presentations.
therapeutic_modality: SMALL_MOLECULE
treatment_term:
preferred_term: Antibiotic Therapy
term:
id: NCIT:C15620
label: Antibiotic Therapy
target_mechanisms:
- target: Bacterial Proliferation in Deep Dermis and Subcutis
treatment_effect: INHIBITS
description: >-
Antibiotics reduce the local bacterial burden driving acute dermal and
subcutaneous inflammation.
evidence:
- reference: PMID:28535235
reference_title: "Effect of Cephalexin Plus Trimethoprim-Sulfamethoxazole vs Cephalexin Alone on Clinical Cure of Uncomplicated Cellulitis: A Randomized Clinical Trial."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: >-
Among patients with uncomplicated cellulitis, the use of cephalexin plus
trimethoprim-sulfamethoxazole compared to cephalexin alone did not result
in higher rates of clinical resolution of cellulitis in the per-protocol
analysis.
explanation: >-
This randomized trial supports streptococcal-targeted beta-lactam therapy
as sufficient for many uncomplicated cellulitis cases without abscess.
- name: Penicillin V Recurrence Prophylaxis
description: >-
Low-dose phenoxymethylpenicillin suppresses recurrent leg cellulitis while
the patient remains on prophylaxis.
therapeutic_modality: SMALL_MOLECULE
treatment_term:
preferred_term: Antibiotic Therapy
term:
id: NCIT:C15620
label: Antibiotic Therapy
therapeutic_agent:
- preferred_term: phenoxymethylpenicillin
term:
id: CHEBI:27446
label: phenoxymethylpenicillin
target_mechanisms:
- target: Bacterial Proliferation in Deep Dermis and Subcutis
treatment_effect: INHIBITS
description: >-
Penicillin prophylaxis suppresses recurrent beta-hemolytic streptococcal
infection of vulnerable lower-extremity tissue.
evidence:
- reference: PMID:23635049
reference_title: Penicillin to prevent recurrent leg cellulitis.
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: >-
In patients with recurrent cellulitis of the leg, penicillin was effective
in preventing subsequent attacks during prophylaxis, but the protective
effect diminished progressively once drug therapy was stopped.
explanation: >-
PATCH I directly supports prophylactic penicillin for recurrent leg
cellulitis and records that its protective effect wanes after withdrawal.
- name: Compression Therapy for Chronic Leg Edema
description: >-
Compression garments address chronic leg edema, a modifiable substrate for
recurrent cellulitis, and lower recurrence in patients with chronic edema
and prior leg cellulitis.
therapeutic_modality: DEVICE
treatment_term:
preferred_term: Compression Therapy
term:
id: NCIT:C157735
label: Compression Therapy
target_mechanisms:
- target: Impaired Lymphatic and Venous Drainage
treatment_effect: MODULATES
description: >-
Compression reduces chronic edema and thereby treats one of the local
susceptibility states upstream of recurrent infection.
evidence:
- reference: PMID:32786188
reference_title: Compression Therapy to Prevent Recurrent Cellulitis of the Leg.
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: >-
In this small, single-center, nonblinded trial involving patients with
chronic edema of the leg and cellulitis, compression therapy resulted in a
lower incidence of recurrence of cellulitis than conservative treatment.
explanation: >-
This randomized trial supports compression therapy for reducing recurrent
cellulitis in chronic leg edema.
animal_models:
- name: GAS covR mutant mouse subcutaneous infection
species: Mouse
genotype: Group A Streptococcus covR/covS mutant derivatives (wild type, ∆covR, ∆covS, SLS-deficient ∆covR)
publication: PMID:41175456
description: >-
Mouse subcutaneous infection with covR/covS regulatory mutants of group A
Streptococcus, used to dissect how streptolysin S expression drives local
soft-tissue lesion size and host-cell death.
modeled_mechanisms:
- target: Streptolysin S-Amplified Streptococcal Cytotoxicity
relationship: PARTIALLY_RECAPITULATES
fidelity: MODERATE
model_scale: CELLULAR
description: >-
SLS-deficient ∆covR bacteria produce smaller lesions and lower mortality
than SLS-competent ∆covR bacteria, isolating streptolysin S as a driver of
keratinocyte and macrophage death and IL-1 beta release.
limitations: >-
This is a pathogen-virulence model of a hypervirulent covR mutant lineage
and does not capture the two dominant human drivers of cellulitis,
impaired lymphatic or venous drainage and episode recurrence; most human
nonpurulent cellulitis is not caused by covR mutant strains.
evidence:
- reference: PMID:41175456
reference_title: Differential expression profile of streptolysin S in the covR and covS mutants of group A Streptococcus is a mediator of keratinocyte death and aggressive local infection.
supports: SUPPORT
evidence_source: MODEL_ORGANISM
snippet: >-
In a mouse subcutaneous infection model, the SLS-deficient ∆covR
mutant exhibited reduced lesion size and mortality compared to the
∆covR mutant
explanation: >-
The model ties streptolysin S to larger local lesions and higher
mortality in a group A streptococcal subcutaneous infection, grounding
the streptolysin S cytotoxicity node.
Deep research results are used as seeds for research; they do not undergo the same validation as the main records and may contain errors. How we use deep research.
Review round 1: wire phenotypes, regrade review evidence, drop unsupported GO term, add animal model · 2026-10-20T04:52:06Z · View source
Addressed the ai4c-reviewer CHANGES_REQUESTED review (6 blocking items). Item 1: added a Localized pain and tenderness phenotype (HP:0012531 Pain) from the already-quoted PMID:42727947 presentation sentence; fever/leukocytosis/tachycardia were NOT added because no cached reference carries an exact snippet for them (the BMJ review abstract lists only warmth, pain, tenderness, erythema, oedema), and localized warmth has no HP term (runoak l~warm / l~warmth / l~heat returned only unrelated terms). Item 2: wired the Innate Inflammatory Edema and Cellulitis Plaque node's downstream to the three phenotypes it produces (erythema, edema, pain/tenderness) as bare-name targets; list-disconnected-phenotypes now 3/3 connected. Item 3: added PMID:27864837 evidence (previous cellulitis OR 40.3, 95% CI 22.6-72.0) to the Recurrent Cellulitis Loop node. Item 4: removed the unsupported GO:0070269 (pyroptotic inflammatory response) binding from the streptolysin S node; kept GO:0032611; trimmed the second SLS snippet to end at 'compared to the covR mutant'. Item 5: regraded all 11 evidence items from the two review publications (PMID:27864837 systematic review/meta-analysis, PMID:42727947 narrative review) from evidence_source OTHER to HUMAN_CLINICAL + quote_role REVIEW_SYNTHESIS. Item 6: added an animal_models block for the GAS covR mutant mouse subcutaneous infection (PMID:41175456) with a PARTIALLY_RECAPITULATES modeled_mechanisms link to the SLS node. Suggestions taken: ALT-70 diagnostic evidence (PMID:30914341, newly fetched) added to the diagnosis node; scope note on periorbital/orbital/diabetic-foot variants folded into notes. Moved the deep-research provenance narration (openscientist fallback, preflight SKIP, the three declined NCIT antibiotic codes NCIT:C349/C376/C932, obsolete GO:0005615) out of notes into this record per the notes-is-not-a-session-log rule. Skipped (non-blocking): NO_PROGRESSION progression block and prevalence block, which need sourced timing/burden figures not present in any cached reference. Validation: just validate, validate-terms, count-verified-snippets 22/22, check-causal-targets, check-granularity (all deterministic classes clean), check-snippet-grading, check-reference-titles, check-folded-hyphens, check-coarse-phenotypes all pass.
Cellulitis is a common acute bacterial infection of the deep dermis and subcutaneous tissue that arises from a "two-hit" combination of a skin-barrier breach and impaired lymphatic/venous drainage. In its most common (non-purulent) form it is predominantly caused by β-hemolytic streptococci, while purulent forms are typically driven by Staphylococcus aureus (including MRSA). Bacterial invasion of subcutaneous tissue, amplified by toxin-mediated cytolysis and a brisk innate inflammatory response, produces the cardinal clinical picture of poorly demarcated erythema, warmth, swelling (edema), pain, and tenderness — usually unilateral and most often affecting the lower leg. It is a clinical diagnosis with no gold-standard laboratory test; roughly one-third of patients admitted for "cellulitis" actually have a non-infectious mimic ("pseudocellulitis"), which drives substantial unnecessary antibiotic use and hospitalization.
The disease sits within a spectrum of skin and soft-tissue infections (SSTIs). At the mild end it overlaps with erysipelas (more superficial) and simple abscess; at the dangerous end it must be distinguished from necrotizing fasciitis (NF), a surgical emergency. The two critical clinical decisions in cellulitis care are therefore (1) purulent vs. non-purulent (which determines whether empiric MRSA coverage is needed) and (2) cellulitis vs. necrotizing infection (which determines whether urgent surgery is required). Uncomplicated non-purulent cellulitis is treated with streptococcal-targeted β-lactams (e.g., cephalexin, dicloxacillin/flucloxacillin, penicillin); a landmark randomized trial showed that adding MRSA-active trimethoprim-sulfamethoxazole to cephalexin provides no benefit in uncomplicated disease.
Cellulitis is a large, rising, and costly public-health burden strongly linked to chronic edema and lymphedema. Recurrence is frequent and is driven by a self-reinforcing cycle in which each episode further damages lymphatics, worsening drainage and predisposing to the next episode. Two categories of prevention have robust randomized-trial support: prophylactic low-dose penicillin V (PATCH I trial: hazard ratio 0.55 for recurrence, number-needed-to-treat 5) and compression therapy for chronic leg edema (Webb NEJM trial: hazard ratio 0.23, stopped early for efficacy). This is not a genetic/Mendelian disease — there are no causal genes; "genetics" enters only through host susceptibility (e.g., diabetes, immune impairment) and pathogen virulence genetics (e.g., group A Streptococcus covR/covS regulatory mutations and toxins SpeB and streptolysin S).
Overview. Cellulitis is an acute, spreading bacterial infection of the deep dermis and subcutaneous fat. Clinically it presents as an area of expanding erythema with warmth, edema, and tenderness, frequently accompanied by systemic features (fever, malaise) in more severe cases. Erysipelas is a closely related, more superficial variant involving the upper dermis and superficial lymphatics, classically with a raised, sharply demarcated border; in much of the clinical literature "cellulitis" and "erysipelas" are grouped together (as in the PATCH prophylaxis trials and the US burden analyses). The disease is best understood as the confluence of two prerequisites: a portal of entry (barrier breach) and impaired local host drainage (edema/lymphedema/venous insufficiency).
Key identifiers.
| Resource | Identifier |
|---|---|
| MONDO | MONDO:0005230 |
| ICD-10 | L03 (Cellulitis and acute lymphangitis); e.g., L03.11 cellulitis of lower limb; periorbital/orbital variants coded under H00–H05 |
| ICD-11 | 1B70 (Cellulitis) |
| MeSH | D002481 "Cellulitis" |
| SNOMED CT | 128045006 (Cellulitis) |
| OMIM / Orphanet | Not applicable — cellulitis is an acquired infectious disease, not a Mendelian disorder; no OMIM phenotype entry, not a rare disease with an Orphanet number |
Synonyms / alternative names. Cellulitis; bacterial cellulitis; skin and soft-tissue infection (as a parent category); erysipelas (superficial variant, often grouped); acute bacterial skin and skin-structure infection (ABSSSI — the regulatory term used in clinical trials); phlegmon (for the more diffuse suppurative form). Site-specific named entities include periorbital (preseptal) cellulitis, orbital (postseptal) cellulitis, and diabetic-foot cellulitis.
Data source type. The evidence base for cellulitis is drawn overwhelmingly from aggregated disease-level resources — randomized controlled trials, systematic reviews/meta-analyses, population-based case-control studies, and national administrative datasets (e.g., US National Emergency Department Sample, National Inpatient Sample) — rather than from individual-patient genomic/EHR mining. This reflects its nature as a common acquired infection rather than a rare genetic disorder.
Primary cause: infectious. Cellulitis is caused by bacteria that gain access to the deep dermis/subcutaneous tissue. The dominant organisms differ by clinical subtype:
Risk factors (environmental/host). Finding F002 synthesizes the strongest quantitative evidence. A systematic review/meta-analysis of 6 case-control studies (PMID: 27864837) and a population-based case-control study of 29,062 pairs (PMID: 29427797) establish the following:
| Risk factor | Odds ratio (95% CI) | Source |
|---|---|---|
| Previous cellulitis | OR 40.3 (22.6–72.0) | PMID 27864837 |
| Wound | OR 19.1 (9.1–40.0) | PMID 27864837 |
| Current leg ulcer | OR 13.7 (7.9–23.6) | PMID 27864837 |
| Lymphoedema / chronic leg oedema | OR 6.8 (3.5–13.3) | PMID 27864837 |
| Excoriating skin disease | OR 4.4 (2.7–7.1) | PMID 27864837 |
| Tinea pedis | OR 3.2 (1.9–5.3) | PMID 27864837 |
| Varicose veins | AOR 2.95 (2.50–3.48) | PMID 29427797 |
| Tinea pedis | AOR 3.05 (1.45–6.42) | PMID 29427797 |
| Lymphoedema | AOR 2.65 (1.71–4.10) | PMID 29427797 |
| Obesity (BMI >30) | AOR 2.05 | PMID 29427797 |
| Saphenous vein harvest | AOR 1.74 | PMID 29427797 |
| Rheumatologic disease | AOR 2.12 | PMID 29427797 |
| Liver disease | AOR 1.77 | PMID 29427797 |
| Renal disease | AOR 1.28 | PMID 29427797 |
These cluster into two mechanistic themes: barrier breaches (wounds, ulcers, tinea pedis, excoriating skin disease) and impaired drainage (lymphedema, chronic edema, varicose veins, obesity, vein harvest). Additional host risk factors include diabetes mellitus, older age, immunosuppression, and congestive heart failure (an ICU-symposium population study reported increased cellulitis risk in CHF, PMID: 27885969). An SSTI resource-utilization cohort confirmed diabetes (OR 1.65), chronic kidney disease (OR 1.34), and lymphedema (OR 1.85) as predictors of adverse hospital course (PMID: 42759235).
Genetic risk factors. There are no established Mendelian causal genes or GWAS-confirmed susceptibility loci for cellulitis. Host genetic contribution is indirect (e.g., genetic conditions producing lymphedema, immunodeficiency, or diabetes would raise risk). This is a key "not applicable" for this disease.
Protective factors. Modifiable/environmental protective factors are the mirror image of the risk factors: treatment of tinea pedis and interdigital maceration, wound care, weight reduction, and control of chronic edema (compression) all reduce risk. Antibiotic prophylaxis (penicillin) reduces recurrence. No genetic protective variants are established.
Gene–environment interactions. The most relevant "gene–environment" axis is pathogen genetics × host environment: e.g., group A Streptococcus strains carrying covR/covS regulatory mutations produce more toxin and cause more aggressive local infection (see Section 6), and diabetic (immunocompromised) hosts allow pathogen regulatory pathways (e.g., staphylococcal ClpX-dependent pathways, PMID: 42262120) to exacerbate disease. Human germline gene–environment interaction data are not established for cellulitis.
Cellulitis phenotypes are clinical signs/symptoms rather than laboratory-defined. Core manifestations, with suggested HPO terms:
| Phenotype | Type | HPO suggestion | Frequency/notes |
|---|---|---|---|
| Erythema (poorly demarcated, spreading) | Clinical sign | HP:0010783 (Erythema) | Near-universal (defining feature) |
| Localized skin warmth | Clinical sign | HP:0011121 (Abnormality of skin morphology) | Very common |
| Edema/swelling of affected area | Clinical sign | HP:0000969 (Edema) | Very common |
| Pain / tenderness | Symptom | HP:0025280 (Pain) | Very common |
| Fever | Symptom/sign | HP:0001945 (Fever) | Common in moderate–severe disease |
| Leukocytosis | Laboratory abnormality | HP:0001974 (Leukocytosis) | Component of ALT-70/LRINEC scoring |
| Tachycardia | Clinical sign | HP:0001649 (Tachycardia) | Component of ALT-70 |
| Lymphangitis / regional lymphadenopathy | Clinical sign | HP:0002716 (Lymphadenopathy) | Variable |
| Bullae / skin necrosis | Clinical sign | HP:0008066 (Abnormal blistering of the skin) | Red flag for necrotizing infection |
Characteristics. Age of onset: any age but incidence rises with age; lower-extremity disease predominates in adults and the elderly. Periorbital cellulitis is disproportionately pediatric. Severity: variable, from mild outpatient-managed cellulitis to severe/systemic disease with sepsis. Progression: typically acute and progressive over hours to a few days; episodic/recurrent over a patient's lifetime is characteristic in those with chronic edema. Frequency among affected: recurrence is common — in prophylaxis-trial control arms, 33–40% of high-risk patients had a recurrence within the study window (PMID: 23635049; PMID: 32786188).
Quality-of-life impact. Cellulitis, especially recurrent disease, imposes significant QOL burden and healthcare cost; chronic edema and repeated episodes cause pain, immobility, missed work, and hospital admissions (PMID: 31420389, ICTOC protocol; PMID: 33238162).
This section is largely "not applicable" in the Mendelian sense. Cellulitis has:
Suggested gene annotations (pathogen, not human): GAS covR/covS, speB, sagA/streptolysin S; S. aureus toxin/regulatory loci.
Environmental/host factors (non-genetic) are the principal drivers (see Section 2): skin barrier disruption (trauma, wounds, ulcers, tinea pedis, eczema, injection drug use), chronic edema/lymphedema, venous insufficiency/varicose veins, obesity, diabetes, prior surgery (e.g., saphenous vein harvest), and immunosuppression.
Lifestyle factors. Obesity is a robust modifiable risk factor (AOR ~2.05). Injection drug use is a recognized portal of entry and outbreak source (e.g., wound botulism among people who inject drugs, PMID: 27885969). Poor foot hygiene facilitating tinea pedis increases risk.
Infectious agents (NCBI Taxonomy).
| Organism | NCBI Taxon | Role |
|---|---|---|
| Streptococcus pyogenes (group A) | txid1314 | Predominant cause of non-purulent cellulitis |
| β-hemolytic streptococci groups B/C/G (incl. S. dysgalactiae) | e.g., S. agalactiae txid1311 | Common causes, esp. in comorbid hosts |
| Staphylococcus aureus (incl. MRSA) | txid1280 | Purulent cellulitis/abscess |
| Haemophilus influenzae type b | txid727 | Historically periorbital/orbital cellulitis (now rare post-vaccine) |
| Streptococcus pneumoniae | txid1313 | Periorbital/orbital cellulitis |
| Burkholderia pseudomallei | txid28450 | Melioidosis mimicking necrotizing SSTI in endemic areas/diabetics |
| Vibrio/Aeromonas spp. | — | Water-exposure cellulitis |
Cellulitis is a clinical diagnosis — there is no confirmatory gold-standard test. Blood and skin cultures are frequently negative (e.g., usually negative in periorbital/orbital series, PMID: 20544674).
Laboratory / biomarkers: Non-specific inflammatory markers (leukocytosis, elevated CRP) support but do not confirm the diagnosis and feed prediction scores. Blood cultures are low-yield except in systemic illness.
Clinical prediction tools (Finding F004): The ALT-70 model (Asymmetry, Leukocytosis, Tachycardia, Age ≥70) "offers an objective tool to help differentiate between cellulitis and other clinically similar conditions at the time of initial emergency department (ED) presentation" and retains predictive value at 24 and 48 hours (PMID: 30914341). Dermatology consultation frequently modifies management and reduces unnecessary antibiotics/hospitalization (PMID: 39614879).
Differential diagnosis (critical): ~One-third of admitted "cellulitis" is pseudocellulitis — "Inflammatory dermatoses of the lower extremity are often misdiagnosed as cellulitis (aka 'pseudocellulitis') and treated with antibiotics and/or hospitalization" (PMID: 27806170). Common mimics: stasis dermatitis, contact dermatitis, lipodermatosclerosis, DVT, gout, and infectious mimics (cryptococcosis PMID: 42240944, kerion/tinea PMID: 42670489).
The high-stakes branch — necrotizing fasciitis (Finding F011): NF "is a rapidly progressing infection of the soft tissues associated with high morbidity and mortality and hence it is a surgical emergency"; the LRINEC score ≥6 yielded a C-statistic of 0.839 (95% CI 0.682–0.995, P=0.001) for NF vs. severe cellulitis (PMID: 36462382). Atypical pathogens (melioidosis) can mimic NSTI in endemic areas (PMID: 41580634).
Imaging: Ultrasound helps exclude abscess and DVT; MRI increases sensitivity/specificity for deep involvement (osteomyelitis in diabetic foot, PMID: 27377687; intramuscular abscess in melioidosis, PMID: 41580634); CT for orbital cellulitis and sinusitis.
Genetic/omics diagnostics: Not applicable — no role for genetic testing, karyotyping, CMA, or human omics diagnostics in cellulitis.
First-line pharmacotherapy targets streptococci for non-purulent disease (Finding F007). A multicenter double-blind RCT (5 US EDs, N=496) tested cephalexin + trimethoprim-sulfamethoxazole vs. cephalexin + placebo for uncomplicated cellulitis (abscess excluded by ultrasound) and found no benefit from adding MRSA coverage: "For cellulitis without purulent drainage, β-hemolytic streptococci are presumed to be the predominant pathogens. It is unknown if antimicrobial regimens possessing in vitro MRSA activity provide improved outcomes compared with treatments lacking MRSA activity" (PMID: 28535235). This anchors streptococcal-targeted therapy for uncomplicated non-purulent cellulitis.
| Drug / class | Role | NCIT suggestion |
|---|---|---|
| Cephalexin (1st-gen cephalosporin) | First-line, non-purulent | NCIT:C349 |
| Dicloxacillin / flucloxacillin (anti-staph penicillin) | First-line | — |
| Penicillin V/G | Streptococcal cellulitis; prophylaxis | NCIT:C376 |
| TMP-SMX, clindamycin, doxycycline | Add for purulent/MRSA-risk | — |
| Vancomycin | Severe/IV MRSA coverage | NCIT:C932 |
| Daptomycin | Complicated SSTI (esp. elderly), incl. MRSA | — |
| Oritavancin, dalbavancin, tedizolid, ceftaroline, delafloxacin, omadacycline | Newer QIDP ABSSSI agents; single-dose options reduce admissions | — |
Supporting drug evidence: newer ABSSSI agents reviewed in PMID: 31528278; single-dose oritavancin safety in the SOLO phase 3 trials (PMID: 29358292); daptomycin first-line in elderly complicated SSTI (PMID: 23990341).
Purulent cellulitis / abscess: incision and drainage is central (I&D associated with lower odds of adverse hospital course, OR 0.16, PMID: 42759235), plus MRSA-active antibiotics.
Diabetic foot / severe disease (Finding F010): mild/moderate infection is empirically treated for gram-positive cocci, whereas "severe or infection caused by drug resistant organisms needs broad spectrum anti-microbial targeting aggressive gram-negative aerobes and obligate anaerobes," with surgical debridement/amputation as needed (PMID: 27377687; surgical management PMID: 18512303).
Necrotizing fasciitis: early surgical debridement is the definitive intervention alongside broad-spectrum antibiotics (F011).
Orbital cellulitis: IV antibiotics, ENT/ophthalmology involvement, drainage of sinus/orbital abscess when indicated (F008).
Supportive care: limb elevation, analgesia, treatment of the portal of entry (e.g., antifungals for tinea pedis), and edema management.
Pharmacogenomics / advanced (gene/cell/RNA) therapeutics: Not applicable to cellulitis.
Primary prevention: treat and prevent barrier breaches (tinea pedis, wounds, eczema), control chronic edema, weight management, glycemic control, and good foot/skin hygiene (targets the risk factors in F002).
Secondary/tertiary prevention — two RCT-backed interventions:
Prophylactic low-dose penicillin V (Finding F003, PATCH I). In a double-blind RCT of 274 patients with ≥2 leg-cellulitis episodes, penicillin V 250 mg twice daily reduced recurrence: "During the prophylaxis phase, 30 of 136 participants in the penicillin group (22%) had a recurrence, as compared with 51 of 138 participants in the placebo group (37%) (hazard ratio, 0.55; 95% confidence interval [CI], 0.35 to 0.86; P=0.01), yielding a number needed to treat to prevent one recurrent cellulitis episode of 5" (PMID: 23635049). PATCH II (underpowered, n=123) was directionally concordant (HR 0.53, P=0.08, PMID: 21910701); pooled economic analysis showed "a 29% reduction in the number of recurrences... (IRR: 0.71 95%CI: 0.53 to 0.90, p = 0.02)" (PMID: 24551029). Caveat: protective effect waned after stopping prophylaxis.
Compression therapy for chronic leg edema (Finding F009, Webb NEJM). Single-center RCT (N=84) of compression + education vs. education alone: "6 participants (15%) in the compression group and 17 (40%) in the control group had had an episode of cellulitis (hazard ratio, 0.23; 95% confidence interval [CI], 0.09 to 0.59; P = 0.002)" — trial stopped early for efficacy (PMID: 32786188). Extended follow-up confirmed sustained benefit and identified that "Chronic oedema is a key modifiable risk factor for incident and recurrent cellulitis" (PMID: 42597865); compression is cost-saving (PMID: 35997601).
Immunization (Finding F008, site-specific). The Haemophilus influenzae type b (Hib) vaccine dramatically reduced Hib-related periorbital/orbital cellulitis: "The introduction of the Hib vaccine coincided with a sharp decline not only in the number of periorbital and orbital cellulitis cases related to H. influenzae, but also in the annual case rate" (PMID: 10919886); "H influenzae type b is no longer a significant pathogen in periorbital or orbital cellulitis" (PMID: 9310918). No vaccine exists for streptococcal/staphylococcal cellulitis generally.
Genetic screening/counseling: Not applicable.
Cellulitis as a bacterial soft-tissue infection occurs naturally across many mammals. A documented veterinary example: in stocker cattle, interdigital necrobacillosis (foot rot) is a polymicrobial interdigital infection where "breach of skin allows bacteria to cause cellulitis, septic arthritis, and lameness," implicating Fusobacterium necrophorum, with prevention via hygiene and possible F. necrophorum vaccination (PMID: 42309844). This mirrors the human "barrier-breach → cellulitis" mechanism.
Orthologous "disease genes" are not applicable (no human causal genes). Model-organism pathogen genes (murine GAS infection) are covered in Section 15.
BARRIER BREACH IMPAIRED DRAINAGE
(tinea pedis, wound, (lymphedema, chronic edema,
ulcer, excoriation) venous insufficiency, obesity)
OR up to 40.3 (prior OR ~2.7-6.8 (lymphedema/edema,
cellulitis), 19.1 (wound) varicose veins)
| |
+------------------+---------------------+
v
BACTERIAL ENTRY & PROLIFERATION
(beta-hemolytic streptococci [non-purulent];
S. aureus/MRSA [purulent])
v
VIRULENCE FACTORS (GAS covR/covS mutants):
SpeB -> gasdermin A cleavage -> keratinocyte pyroptosis
Streptolysin S -> keratinocyte/macrophage death, IL-1beta
v
INNATE INFLAMMATION + EDEMA
v
ERYTHEMA + WARMTH + SWELLING + PAIN (unilateral)
|
+----------------------+----------------------+-------------------+
v v v v
RESOLUTION RECURRENCE LOOP NECROTIZING DIABETIC
(antibiotics + (lymphatic damage -> FASCIITIS ESCALATION
host defense) worse drainage -> (fascia; LRINEC>=6; (osteomyelitis,
next episode) surgical emergency) gangrene,
PREVENT: penicillin amputation)
(HR 0.55) & compression
(HR 0.23)
The unifying insight is that cellulitis is a "two-hit" disease: neither a barrier breach nor impaired drainage alone reliably causes it, but together they establish infection. This explains why the most effective preventive strategies target the host substrate (compression for edema) and bacterial persistence/recolonization (penicillin prophylaxis) rather than any intrinsic host genetics. It also explains the self-perpetuating recurrence loop (prior cellulitis = strongest risk factor) via cumulative lymphatic injury.
| PMID | Title (abbrev.) | Supports |
|---|---|---|
| 42711142 | Non-Purulent Cellulitis—An Updated Review | F001 microbiology |
| 42727947 | Advances in diagnosis/management of SSTI | F001 purulent vs non-purulent |
| 27864837 | Risk factors for nonpurulent leg cellulitis (meta-analysis) | F002 risk factors |
| 29427797 | Severe lower limb cellulitis case-control | F002 risk factors |
| 23635049 | Penicillin to prevent recurrent leg cellulitis (PATCH I) | F003 prophylaxis |
| 24551029 | PATCH I&II economic analysis | F003 pooled effect |
| 21910701 | PATCH II trial | F003 corroboration |
| 39614879 | Dermatology consultation/diagnostic stewardship | F004 diagnosis |
| 30914341 | ALT-70 model at 24/48h | F004 prediction tool |
| 27806170 | Costs of misdiagnosed cellulitis (pseudocellulitis) | F004 mimics |
| 41175456 | Streptolysin S / covR-covS keratinocyte death | F005 mechanism |
| 33238162 | Burden of cellulitis/erysipelas in US ED | F006 burden |
| 32932222 | Epidemiology of lymphedema admissions | F006 lymphedema link |
| 28535235 | Cephalexin ± TMP-SMX RCT | F007 treatment |
| 20544674 | Periorbital/orbital cellulitis 10-yr review | F008 site-specific |
| 10919886 | Pre/post Hib vaccination cellulitis | F008 vaccine prevention |
| 9310918 | Periorbital/orbital cellulitis in Hib vaccine era | F008 corroboration |
| 32786188 | Compression therapy RCT (NEJM) | F009 prevention |
| 42597865 | Sustained benefit of compression (follow-up) | F009 durability |
| 35997601 | Compression is cost-saving | F009 economics |
| 27377687 | Understanding diabetic foot infection | F010 diabetic branch |
| 19882060 | Hand sepsis in diabetes | F010 amputation risk |
| 36462382 | LRINEC/SIARI validation for NF | F011 diagnosis branch |
| 41580634 | Melioidosis mimicking NSTI | F011 mimics |
| 31528278 | New ABSSSI drugs | Treatment options |
| 29358292 | Oritavancin SOLO safety | Single-dose therapy |
| 23990341 | Daptomycin in elderly cSSTI | Treatment (elderly) |
| 42759235 | ED disposition/resource use for SSTI | Prognostic factors |
| 42309844 | Non-respiratory diseases of stocker cattle | Veterinary/comparative |
Report generated from a 5-iteration autonomous discovery investigation: 11 confirmed findings, 52 papers reviewed. Evidence types span human clinical RCTs and observational studies (F001–F004, F006–F011) and mouse/in-vitro pathogen-mechanism studies (F005).
Checked with linkml-reference-validator 0.3.0rc3.
| Outcome | Count |
|---|---|
| References checked | 39 |
| Resolved | 39 |
| Unresolved (possible confabulation) | 0 |
| Unverifiable | 0 |
| Quoted claims checked | 12 |
| Quoted claims found in source | 11 |
| Quoted claims not found in source | 1 |
| References weighed for topical relevance | 39 |
| On topic | 20 |
| Off topic | 0 |
Searched the abstract, any retrieved full text, and the title. A quote drawn from a part of the paper that was not retrieved will appear here too, so check before treating one as invented:
Every one of these was searched against an abstract alone, with no full text retrieved - marked abstract only below. Where full text can be fetched, re-running with it will settle them; where the source publishes only a summary to PubMed, as GeneReviews chapters do, it will not, and the quote has to be checked by hand against the chapter itself.
PMID:23635049 (abstract only): "During the prophylaxis phase, 30 of 136 participants in the penicillin group (22%) had a recurrence, as compared with 51 of 138 participants in the placebo group (37%) (hazard ratio, 0.55; 95% confidence interval [CI], 0.35 to 0.86; P=0.01), yielding a number needed to treat to prevent one recurrent cellulitis episode of 5"Checked with linkml-term-validator 0.4.5, through the ols: adapter.
| Outcome | Count |
|---|---|
| Terms checked | 32 |
| Resolved | 31 |
| Unresolved (possible confabulation) | 0 |
| Obsolete | 1 |
| Unverifiable | 0 |
| Terms whose name was checked | 21 |
| Terms named correctly | 10 |
| Terms named as a different term | 4 |
| Terms whose name is worth a second look | 7 |
These identifiers resolve, so nothing about them looks wrong, and the ontology calls them something unrelated to what the report calls them. That usually means the identifier is not the one the sentence needs:
MONDO:0005230 (2 mentions) - the report calls it "MONDO"; MONDO calls it cellulitisNCIT:C349 (1 mention) - the report calls it "First-line, non-purulent"; NCIT calls it CarmustineNCIT:C376 (1 mention) - the report calls it "Streptococcal cellulitis; prophylaxis"; NCIT calls it CisplatinNCIT:C932 (1 mention) - the report calls it "Severe/IV MRSA coverage"; NCIT calls it Vinca Alkaloid CompoundThese terms are real but deprecated. Citing one is not a fabrication; it does mean the report is naming something the ontology has retired:
GO:0005615 (obsolete extracellular space) (1 mention) - replaced by GO:0005576The report's name for these is recognisably related to the term's own name without being one of them. A loose paraphrase reads the same way as a citation of the wrong sibling term - and so does a related synonym, which the ontology records precisely because it names something adjacent rather than the same thing - so these are listed rather than judged:
HP:0011121 (1 mention) - the report calls it "Abnormality of skin morphology"; HP calls it Abnormal skin morphology, and lists "Abnormality of skin morphology" among its other namesHP:0025280 (1 mention) - the report calls it "Pain"; HP calls it Pain characteristicHP:0001974 (1 mention) - the report calls it "Leukocytosis"; HP calls it Increased total leukocyte count, and lists "Leukocytosis" among its other namesGO:0070269 (1 mention) - the report calls it "pyroptosis"; GO calls it pyroptotic inflammatory response, and lists "pyroptosis" among its other namesUBERON:0002067 (1 mention) - the report calls it "deep dermis"; UBERON calls it dermisUBERON:0002072 (1 mention) - the report calls it "subcutaneous tissue / hypodermis"; UBERON calls it hypodermis, and lists "subcutaneous tissue" among its other namesUBERON:0000978 (1 mention) - the report calls it "Most common site: lower extremity/leg"; UBERON calls it leg**, and lists "lower extremity" among its other names