CWC27-related retinitis pigmentosa with or without skeletal anomalies (RPSKA) is an autosomal recessive spliceosomopathy caused by biallelic protein-truncating or splice-disrupting variants in CWC27, a spliceosome-associated cyclophilin-like protein that joins the activated (Bact) spliceosome together with its partner CWC22. Its N-terminal cyclophilin domain has lost the catalytic residue and is thought to bind proline rather than isomerize it. The disease spans isolated retinal degeneration (retinitis pigmentosa, or Leber congenital amaurosis in one child) to a syndrome adding brachydactyly, craniofacial anomalies, short stature, developmental delay with intellectual disability, and ectodermal features such as sparse hair, eyebrows and eyelashes and dental anomalies. Night blindness typically begins near age ten and is followed by constriction of the visual fields. Severity tracks allele position: C-terminal truncations give the retina-restricted form, earlier truncations the syndrome, and the same split is reproduced by a hypomorphic C-terminal frameshift mouse (late-onset retinal degeneration) versus Cwc27 knockout mice (embryonic lethality with growth, craniofacial and limb defects). CWC27 is unusual among spliceosome genes in causing both the retinal and the craniofacial-skeletal spliceosomopathy phenotypes.
Ask a research question about CWC27-Related Retinitis Pigmentosa With or Without Skeletal Anomalies. OpenScientist will conduct autonomous deep research using the Disorder Mechanisms Knowledge Base and PubMed literature (typically 10-30 minutes).
Do not include personal health information in your question. Questions and results are cached in your browser's local storage.
name: CWC27-Related Retinitis Pigmentosa With or Without Skeletal Anomalies
creation_date: "2026-10-28T05:22:39Z"
category: Mendelian
description: >-
CWC27-related retinitis pigmentosa with or without skeletal anomalies (RPSKA)
is an autosomal recessive spliceosomopathy caused by biallelic
protein-truncating or splice-disrupting variants in CWC27, a
spliceosome-associated cyclophilin-like protein that joins the activated (Bact)
spliceosome together with its partner CWC22. Its N-terminal cyclophilin
domain has lost the catalytic residue and is thought to bind proline rather
than isomerize it. The disease spans isolated retinal degeneration
(retinitis pigmentosa, or Leber congenital amaurosis in one child) to a
syndrome adding brachydactyly, craniofacial anomalies, short stature,
developmental delay with intellectual disability, and ectodermal features
such as sparse hair, eyebrows and eyelashes and dental anomalies. Night
blindness typically begins near age ten and is followed by constriction of
the visual fields. Severity tracks allele position: C-terminal truncations
give the retina-restricted form, earlier truncations the syndrome, and the
same split is reproduced by a hypomorphic C-terminal frameshift mouse
(late-onset retinal degeneration) versus Cwc27 knockout mice (embryonic
lethality with growth, craniofacial and limb defects). CWC27 is unusual among
spliceosome genes in causing both the retinal and the craniofacial-skeletal
spliceosomopathy phenotypes.
disease_term:
preferred_term: metaphyseal chondrodysplasia-retinitis pigmentosa syndrome
term:
id: MONDO:0009598
label: metaphyseal chondrodysplasia-retinitis pigmentosa syndrome
synonyms:
- Retinitis pigmentosa with or without skeletal anomalies
- RPSKA
- CWC27-related retinopathy with or without syndromic features
- CWC27-related spliceosomopathy
parents:
- Ophthalmological Disease
- Retinal Dystrophy
- Inherited retinal dystrophy
- Skeletal Dysplasia
- Spliceosomopathy
inheritance:
- name: Autosomal recessive inheritance
inheritance_term:
preferred_term: Autosomal recessive inheritance
term:
id: HP:0000007
label: Autosomal recessive inheritance
description: >-
Homozygous or compound heterozygous truncating and splice-site variants;
heterozygous parents and heterozygous mice are unaffected.
evidence:
- reference: PMID:28285769
reference_title: "Mutations in the Spliceosome Component CWC27 Cause Retinal Degeneration with or without Additional Developmental Anomalies."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "By whole-exome sequencing, recessive protein-truncating mutations in CWC27 were found in seven unrelated families that show a range of clinical phenotypes"
explanation: Recessive truncating variants in seven families.
- reference: CGGV:assertion_95089ec9-1b91-4ee0-a743-a780d123aad0-2025-07-03T160000.000Z
reference_title: "CWC27 / metaphyseal chondrodysplasia-retinitis pigmentosa syndrome (Definitive)"
supports: SUPPORT
evidence_source: OTHER
snippet: "The variants segregated fully with disease, and were not found in the heterozygous state."
explanation: ClinGen summary of segregation across the curated probands.
pathophysiology:
- name: Biallelic CWC27 Loss-of-Function Variants
conforms_to: "spliceosome_component_dysfunction#Germline Spliceosome Component Variant"
description: >-
Biallelic nonsense, frameshift and canonical splice-site variants truncate
CWC27. Patient blood RNA and mouse retina show that the mutant transcripts
escape complete nonsense-mediated decay, so truncated protein may persist.
CWC27 binds CWC22 directly through its C-terminal region, forming a
heterodimer that sits in the Bact spliceosome and stabilizes eIF4A3
binding; the protein binding term records that shown interaction. No
peptidyl-prolyl isomerase activity term is bound, because the human
cyclophilin domain lacks a conserved active-site residue and is described
as catalytically inactive. Allele position predicts severity: C-terminal
truncations such as p.Val335Serfs*13 cause retina-restricted disease, while
earlier truncations cause the syndromic form.
biological_scale: MOLECULAR
genes:
- preferred_term: CWC27
term:
id: hgnc:10664
label: CWC27
molecular_functions:
- preferred_term: CWC22 binding
term:
id: GO:0005515
label: protein binding
cellular_components:
- preferred_term: spliceosomal complex
term:
id: GO:0005681
label: spliceosomal complex
evidence:
- reference: CGGV:assertion_95089ec9-1b91-4ee0-a743-a780d123aad0-2025-07-03T160000.000Z
reference_title: "CWC27 / metaphyseal chondrodysplasia-retinitis pigmentosa syndrome (Definitive)"
supports: SUPPORT
evidence_source: OTHER
snippet: "This curation includes ten variants (five nonsense, three frameshift, and two disrupting splicing) that have collectively been reported in ten probands in four publications"
explanation: The variant spectrum across reported probands.
- reference: PMID:28285769
reference_title: "Mutations in the Spliceosome Component CWC27 Cause Retinal Degeneration with or without Additional Developmental Anomalies."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "Similarly, the affected individuals in families 3 and 7 with a frameshift mutation (p.Val335Serfs∗13) in the C-terminal part of the protein have a milder phenotype, whereas affected individuals with earlier CWC27 protein truncations have craniofacial defects, brachydactyly, short stature, and neurological defects as common features."
explanation: Genotype-phenotype correlation by truncation position.
- reference: PMID:28285769
reference_title: "Mutations in the Spliceosome Component CWC27 Cause Retinal Degeneration with or without Additional Developmental Anomalies."
supports: SUPPORT
evidence_source: IN_VITRO
snippet: "Furthermore, qRT-PCR on the RNA of the two affected individuals from family 4 showed that the CWC27 mRNA quantity was reduced by only 33%–43% compared with a control subject"
explanation: In patient fibroblasts, mutant CWC27 transcripts are only partly degraded.
- reference: PMID:32329775
reference_title: "Structural and functional insights into CWC27/CWC22 heterodimer linking the exon junction complex to spliceosomes."
supports: SUPPORT
evidence_source: IN_VITRO
snippet: "By biochemical and structural approaches, we showed that the interaction between the two proteins is direct and mediated by the C-terminus of CWC27 and the MIF4G domain of CWC22."
explanation: Direct CWC27-CWC22 binding, the basis of the protein binding term.
- reference: PMID:32329775
reference_title: "Structural and functional insights into CWC27/CWC22 heterodimer linking the exon junction complex to spliceosomes."
supports: SUPPORT
evidence_source: IN_VITRO
snippet: "CWC27 and CWC22 are bound together outside of the spliceosome before being integrated together in the Bact spliceosome in which the heterodimer forms a stable landing platform for eIF4A3."
explanation: Places the heterodimer in the Bact spliceosome.
- reference: PMID:25478830
reference_title: "Structure and evolution of the spliceosomal peptidyl-prolyl cis-trans isomerase Cwc27."
supports: SUPPORT
evidence_source: COMPUTATIONAL
snippet: "This analysis revealed the specific loss of a crucial active-site residue in higher eukaryotic Cwc27 proteins, suggesting that the protein evolved from a prolyl isomerase to a pure proline binder."
explanation: Why no isomerase activity term is bound on this node.
downstream:
- target: Retinal Mis-Splicing With Intron Retention
causal_link_type: DIRECT
- target: Impaired Embryonic Growth and Craniofacial-Limb Development
causal_link_type: INDIRECT_UNKNOWN_INTERMEDIATES
- name: Retinal Mis-Splicing With Intron Retention
conforms_to: "spliceosome_component_dysfunction#Mis-Splicing of a Sensitive Transcript Subset"
description: >-
Evidence comes from the Cwc27 K338fs/K338fs mouse retina, where bulk and
single-cell RNA sequencing found altered splice-site usage and intron
retention alongside gene expression changes, the first in vivo evidence that
CWC27 acts as a splicing factor. In a human RPE cell line (hTERT RPE-1),
CWC27 knock-down changed expression of many of the same genes as CWC22
knock-down. Which mis-spliced transcripts explain photoreceptor loss is not
established.
biological_scale: CELLULAR
biological_processes:
- preferred_term: mRNA splicing, via spliceosome
term:
id: GO:0000398
label: mRNA splicing, via spliceosome
modifier: ABNORMAL
evidence:
- reference: PMID:34726245
reference_title: "Cwc27, associated with retinal degeneration, functions as a splicing factor in vivo."
supports: SUPPORT
evidence_source: MODEL_ORGANISM
snippet: "Bulk RNA and single cell RNA-sequencing of the mouse retina showed that there were gene expression and splicing pattern changes, including alternative splice site usage and intron retention."
explanation: Mis-splicing in the hypomorphic mouse retina.
- reference: PMID:32329775
reference_title: "Structural and functional insights into CWC27/CWC22 heterodimer linking the exon junction complex to spliceosomes."
supports: SUPPORT
evidence_source: IN_VITRO
snippet: "Knock-down of either CWC27 or CWC22 in immortalized retinal pigment epithelial cells affects numerous common genes, indicating that these proteins cooperate, targeting the same pathways."
explanation: Gene expression changes after CWC27 depletion in human RPE cells.
downstream:
- target: Retinal Endoplasmic Reticulum Stress
causal_link_type: INDIRECT_UNKNOWN_INTERMEDIATES
- target: Photoreceptor Degeneration
causal_link_type: INDIRECT_UNKNOWN_INTERMEDIATES
- name: Retinal Endoplasmic Reticulum Stress
description: >-
CHOP staining in the Cwc27 K338fs/K338fs mouse retina suggests ER stress
follows the splicing changes. The authors propose it as a likely
contributor; it has not been tested by blocking ER stress.
biological_scale: CELLULAR
biological_processes:
- preferred_term: response to endoplasmic reticulum stress
term:
id: GO:0034976
label: response to endoplasmic reticulum stress
modifier: INCREASED
evidence:
- reference: PMID:34726245
reference_title: "Cwc27, associated with retinal degeneration, functions as a splicing factor in vivo."
supports: SUPPORT
evidence_source: MODEL_ORGANISM
snippet: "Positive staining for CHOP suggests that ER stress may be activated in response to the splicing pattern changes and is a likely contributor to the disease mechanism."
explanation: Proposed ER stress downstream of mis-splicing in mouse retina.
downstream:
- target: Photoreceptor Degeneration
causal_link_type: INDIRECT_UNKNOWN_INTERMEDIATES
- name: Photoreceptor Degeneration
conforms_to: "spliceosome_component_dysfunction#Failure of Splicing-Sensitive Cell Populations"
description: >-
Photoreceptors degenerate, with loss of the outer nuclear layer and outer
segments in patients. In mice the evidence comes from the hypomorphic
K338fs model, whose degeneration is driven mainly by photoreceptor death,
includes cones, and is reduced by AAV8 delivery of Cwc27 to
photoreceptors. Whether the retinal pigment epithelium fails independently
has not been studied.
biological_scale: CELLULAR
cell_types:
- preferred_term: rod photoreceptor
term:
id: CL:0000604
label: retinal rod cell
- preferred_term: cone photoreceptor
term:
id: CL:0000573
label: retinal cone cell
biological_processes:
- preferred_term: photoreceptor cell maintenance
term:
id: GO:0045494
label: photoreceptor cell maintenance
modifier: DECREASED
evidence:
- reference: PMID:28285769
reference_title: "Mutations in the Spliceosome Component CWC27 Cause Retinal Degeneration with or without Additional Developmental Anomalies."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "OCT through the retinal fovea shows a loss of volume of the outer nuclear layer (photoreceptor nuclei) and complete absence of the photoreceptor outer segments throughout the field of view."
explanation: Photoreceptor loss on OCT in a patient.
- reference: PMID:37479075
reference_title: "Gene augmentation therapy to rescue degenerative photoreceptors in a Cwc27 mutant mouse model."
supports: SUPPORT
evidence_source: MODEL_ORGANISM
snippet: "By 6 months of age, Cwc27 mutant mice show a retinal degenerative phenotype, including morphological and functional abnormalities, primarily driven by the death of photoreceptors."
explanation: Photoreceptor death drives the mouse retinal phenotype.
- reference: PMID:37479075
reference_title: "Gene augmentation therapy to rescue degenerative photoreceptors in a Cwc27 mutant mouse model."
supports: SUPPORT
evidence_source: MODEL_ORGANISM
snippet: "Immunostaining analyses revealed a notable decrease in photoreceptor degeneration, including cone cell degeneration, in the AAV-injected eyes compared to the PBS-injected eyes."
explanation: Restoring Cwc27 in photoreceptors reduces rod and cone degeneration.
downstream:
- target: Rod-cone dystrophy
- target: Nyctalopia
- target: Constriction of peripheral visual field
- target: Attenuation of retinal blood vessels
- target: Chorioretinal atrophy
- name: Impaired Embryonic Growth and Craniofacial-Limb Development
description: >-
Complete loss of Cwc27 in knockout mice (tm1b, tm1Lex) causes near-complete
embryonic lethality, growth retardation, neural tube closure failure,
absent limb buds and delayed digit separation. These are much more severe
than the human syndrome but point to a developmental requirement for CWC27
that the hypomorphic retinal mouse does not show. Whether mis-splicing in
neural crest, limb or brain precursors is the operative step has not been
shown, so this node is linked to the variant node without a mis-splicing
intermediate, and the neurodevelopmental features are attached to it
without a known mechanism.
biological_scale: ORGANISM
evidence:
- reference: PMID:28285769
reference_title: "Mutations in the Spliceosome Component CWC27 Cause Retinal Degeneration with or without Additional Developmental Anomalies."
supports: SUPPORT
evidence_source: MODEL_ORGANISM
snippet: "Specifically, at E12.5, we observed marked growth retardation, neural tube closure failure, and absence of limb buds in Cwc27tm1b/tm1b embryos with the most severe defects (Figure 3I)."
explanation: Developmental defects in knockout embryos.
- reference: PMID:28285769
reference_title: "Mutations in the Spliceosome Component CWC27 Cause Retinal Degeneration with or without Additional Developmental Anomalies."
supports: SUPPORT
evidence_source: MODEL_ORGANISM
snippet: "These phenotypes, though much more severe than the human clinical manifestations, demonstrate the delayed growth as well as compromised craniofacial and limb development in the Cwc27 mutants."
explanation: Authors relate the knockout defects to the human syndrome.
downstream:
- target: Brachydactyly
causal_link_type: INDIRECT_UNKNOWN_INTERMEDIATES
- target: Short stature
causal_link_type: INDIRECT_UNKNOWN_INTERMEDIATES
- target: Frontal bossing
causal_link_type: INDIRECT_UNKNOWN_INTERMEDIATES
- target: Micrognathia
causal_link_type: INDIRECT_UNKNOWN_INTERMEDIATES
- target: Downslanted palpebral fissures
causal_link_type: INDIRECT_UNKNOWN_INTERMEDIATES
- target: Low-set ears
causal_link_type: INDIRECT_UNKNOWN_INTERMEDIATES
- target: Intellectual disability
causal_link_type: INDIRECT_UNKNOWN_INTERMEDIATES
- target: Delayed speech and language development
causal_link_type: INDIRECT_UNKNOWN_INTERMEDIATES
- target: Delayed ability to walk
causal_link_type: INDIRECT_UNKNOWN_INTERMEDIATES
phenotypes:
- name: Rod-cone dystrophy
category: Ophthalmological
frequency: VERY_FREQUENT
description: >-
Retinitis pigmentosa in most patients; one child had Leber congenital
amaurosis. Retinal degeneration was present in 9 of 10 patients in the
founding series.
phenotype_term:
preferred_term: Retinitis pigmentosa
term:
id: HP:0000510
label: Rod-cone dystrophy
evidence:
- reference: PMID:28285769
reference_title: "Mutations in the Spliceosome Component CWC27 Cause Retinal Degeneration with or without Additional Developmental Anomalies."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "We observed a common phenotype in the majority of these affected individuals, consisting of retinal degeneration (9/10), brachydactyly (9/10), craniofacial defects (8/10), short stature (8/10), and neurological defects (8/10)."
explanation: Retinal degeneration in 9 of 10 patients.
- reference: PMID:28285769
reference_title: "Mutations in the Spliceosome Component CWC27 Cause Retinal Degeneration with or without Additional Developmental Anomalies."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "In our cohort, retinal defects include RP in most affected individuals"
explanation: The retinal degeneration is retinitis pigmentosa in most patients.
- name: Nyctalopia
category: Ophthalmological
phenotype_term:
preferred_term: Night blindness
term:
id: HP:0000662
label: Nyctalopia
evidence:
- reference: PMID:28285769
reference_title: "Mutations in the Spliceosome Component CWC27 Cause Retinal Degeneration with or without Additional Developmental Anomalies."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "with night blindness occurring at around 10 years of age, followed by restriction of visual fields"
explanation: Night blindness from about age ten.
- reference: PMID:38956876
reference_title: "A novel small deletion in CWC27 gene associated with CWC27-related spliceosomeopathy."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "The patient had poor vision, nyctalopia and nystagmus from childhood."
explanation: Childhood nyctalopia in a further patient.
- name: Constriction of peripheral visual field
category: Ophthalmological
phenotype_term:
preferred_term: Restriction of visual fields
term:
id: HP:0001133
label: Constriction of peripheral visual field
evidence:
- reference: PMID:28285769
reference_title: "Mutations in the Spliceosome Component CWC27 Cause Retinal Degeneration with or without Additional Developmental Anomalies."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "with night blindness occurring at around 10 years of age, followed by restriction of visual fields"
explanation: Field constriction follows night blindness.
- name: Nystagmus
category: Ophthalmological
phenotype_term:
preferred_term: Nystagmus
term:
id: HP:0000639
label: Nystagmus
evidence:
- reference: PMID:38956876
reference_title: "A novel small deletion in CWC27 gene associated with CWC27-related spliceosomeopathy."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "The patient had poor vision, nyctalopia and nystagmus from childhood."
explanation: Nystagmus from childhood in a patient with early-onset disease.
- name: Attenuation of retinal blood vessels
category: Ophthalmological
phenotype_term:
preferred_term: Thinning of the retinal vessels
term:
id: HP:0007843
label: Attenuation of retinal blood vessels
evidence:
- reference: PMID:28285769
reference_title: "Mutations in the Spliceosome Component CWC27 Cause Retinal Degeneration with or without Additional Developmental Anomalies."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "For individual 5:II-1, funduscopy and fundus autofluorescence imaging show thinning of the retinal vessels and a reduced autofluorescence from the RPE layer consistent with outer retinal degeneration."
explanation: Vessel attenuation on fundus imaging.
- name: Chorioretinal atrophy
category: Ophthalmological
phenotype_term:
preferred_term: Chorioretinal atrophy
term:
id: HP:0000533
label: Chorioretinal atrophy
evidence:
- reference: PMID:38956876
reference_title: "A novel small deletion in CWC27 gene associated with CWC27-related spliceosomeopathy."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "Fundoscopy revealed extensive chorioretinal atrophy with numerous scattered greyish pigmentation."
explanation: Extensive chorioretinal atrophy in one patient.
- name: Cataract
category: Ophthalmological
phenotype_term:
preferred_term: Cataract
term:
id: HP:0000518
label: Cataract
evidence:
- reference: PMID:31481716
reference_title: "Expanding the clinical and molecular spectrum of the CWC27-related spliceosomopathy."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "in addition to hypergonadotropic hypogonadism, hypoplastic/agenesic teeth, and cataracts, not previously associated with such phenotypic spectrum"
explanation: Cataracts in a single reported patient.
- name: Brachydactyly
category: Skeletal
frequency: VERY_FREQUENT
description: Affects mainly the distal phalanges; present in 9 of 10 patients in the founding series.
phenotype_term:
preferred_term: Brachydactyly
term:
id: HP:0001156
label: Brachydactyly
evidence:
- reference: PMID:28285769
reference_title: "Mutations in the Spliceosome Component CWC27 Cause Retinal Degeneration with or without Additional Developmental Anomalies."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "We observed a common phenotype in the majority of these affected individuals, consisting of retinal degeneration (9/10), brachydactyly (9/10), craniofacial defects (8/10), short stature (8/10), and neurological defects (8/10)."
explanation: Brachydactyly in 9 of 10 patients.
- reference: CGGV:assertion_95089ec9-1b91-4ee0-a743-a780d123aad0-2025-07-03T160000.000Z
reference_title: "CWC27 / metaphyseal chondrodysplasia-retinitis pigmentosa syndrome (Definitive)"
supports: SUPPORT
evidence_source: OTHER
snippet: "brachydactyly (affects primarily the distal phalanges)"
explanation: ClinGen summary of the digital involvement.
- name: Short stature
category: Growth
frequency: VERY_FREQUENT
phenotype_term:
preferred_term: Short stature
term:
id: HP:0004322
label: Short stature
evidence:
- reference: PMID:28285769
reference_title: "Mutations in the Spliceosome Component CWC27 Cause Retinal Degeneration with or without Additional Developmental Anomalies."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "We observed a common phenotype in the majority of these affected individuals, consisting of retinal degeneration (9/10), brachydactyly (9/10), craniofacial defects (8/10), short stature (8/10), and neurological defects (8/10)."
explanation: Short stature in 8 of 10 patients.
- name: Frontal bossing
category: Craniofacial
phenotype_term:
preferred_term: Frontal bossing
term:
id: HP:0002007
label: Frontal bossing
evidence:
- reference: PMID:28285769
reference_title: "Mutations in the Spliceosome Component CWC27 Cause Retinal Degeneration with or without Additional Developmental Anomalies."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "Craniofacial anomalies include frontal bossing, large columella, micrognathia, down-slanting palpebral fissures, large and low-set ears, and hypoplasia of nares."
explanation: Listed among the craniofacial anomalies.
- name: Micrognathia
category: Craniofacial
phenotype_term:
preferred_term: Micrognathia
term:
id: HP:0000347
label: Micrognathia
evidence:
- reference: PMID:28285769
reference_title: "Mutations in the Spliceosome Component CWC27 Cause Retinal Degeneration with or without Additional Developmental Anomalies."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "Craniofacial anomalies include frontal bossing, large columella, micrognathia, down-slanting palpebral fissures, large and low-set ears, and hypoplasia of nares."
explanation: Listed among the craniofacial anomalies.
- name: Downslanted palpebral fissures
category: Craniofacial
phenotype_term:
preferred_term: Downslanted palpebral fissures
term:
id: HP:0000494
label: Downslanted palpebral fissures
evidence:
- reference: PMID:28285769
reference_title: "Mutations in the Spliceosome Component CWC27 Cause Retinal Degeneration with or without Additional Developmental Anomalies."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "Craniofacial anomalies include frontal bossing, large columella, micrognathia, down-slanting palpebral fissures, large and low-set ears, and hypoplasia of nares."
explanation: Listed among the craniofacial anomalies.
- name: Low-set ears
category: Craniofacial
phenotype_term:
preferred_term: Large and low-set ears
term:
id: HP:0000369
label: Low-set ears
evidence:
- reference: PMID:28285769
reference_title: "Mutations in the Spliceosome Component CWC27 Cause Retinal Degeneration with or without Additional Developmental Anomalies."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "Craniofacial anomalies include frontal bossing, large columella, micrognathia, down-slanting palpebral fissures, large and low-set ears, and hypoplasia of nares."
explanation: Listed among the craniofacial anomalies.
- name: Intellectual disability
category: Neurological
phenotype_term:
preferred_term: Intellectual disability
term:
id: HP:0001249
label: Intellectual disability
evidence:
- reference: PMID:28285769
reference_title: "Mutations in the Spliceosome Component CWC27 Cause Retinal Degeneration with or without Additional Developmental Anomalies."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "Neurological features include delays in speech, feeding, and walking as well as intellectual disability."
explanation: Intellectual disability among the neurological features, which were present in 8 of 10 patients.
- name: Delayed speech and language development
category: Neurological
phenotype_term:
preferred_term: Speech delay
term:
id: HP:0000750
label: Delayed speech and language development
evidence:
- reference: PMID:28285769
reference_title: "Mutations in the Spliceosome Component CWC27 Cause Retinal Degeneration with or without Additional Developmental Anomalies."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "Neurological features include delays in speech, feeding, and walking as well as intellectual disability."
explanation: Speech delay among the neurological features.
- name: Delayed ability to walk
category: Neurological
phenotype_term:
preferred_term: Delayed walking
term:
id: HP:0031936
label: Delayed ability to walk
evidence:
- reference: PMID:28285769
reference_title: "Mutations in the Spliceosome Component CWC27 Cause Retinal Degeneration with or without Additional Developmental Anomalies."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "Neurological features include delays in speech, feeding, and walking as well as intellectual disability."
explanation: Delayed walking among the neurological features.
- name: Feeding difficulties
category: Neurological
phenotype_term:
preferred_term: Feeding delay
term:
id: HP:0011968
label: Feeding difficulties
evidence:
- reference: PMID:28285769
reference_title: "Mutations in the Spliceosome Component CWC27 Cause Retinal Degeneration with or without Additional Developmental Anomalies."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "Neurological features include delays in speech, feeding, and walking as well as intellectual disability."
explanation: Feeding delay among the neurological features.
- name: Sparse scalp hair
category: Dermatological
phenotype_term:
preferred_term: Sparse scalp hair
term:
id: HP:0002209
label: Sparse scalp hair
evidence:
- reference: PMID:36718996
reference_title: "Further delineation of the CWC27-associated spliceosomeopathy: Case report and review of the literature."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "we highlight ectodermal involvement including sparse scalp hair, eyebrows and lashes, pigmentary differences, nail dysplasia, and dental anomalies as a core phenotype associated with the CWC27 spliceosomopathy"
explanation: Sparse scalp hair proposed as a core ectodermal feature.
- reference: PMID:28285769
reference_title: "Mutations in the Spliceosome Component CWC27 Cause Retinal Degeneration with or without Additional Developmental Anomalies."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "Note the high frontal hairline, sparse hair, eyebrows, and eyelashes, low-set ears, and thick lips."
explanation: Sparse hair in the two affected siblings of family 4.
- name: Sparse eyebrow
category: Dermatological
phenotype_term:
preferred_term: Sparse eyebrows
term:
id: HP:0045075
label: Sparse eyebrow
evidence:
- reference: PMID:36718996
reference_title: "Further delineation of the CWC27-associated spliceosomeopathy: Case report and review of the literature."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "we highlight ectodermal involvement including sparse scalp hair, eyebrows and lashes, pigmentary differences, nail dysplasia, and dental anomalies as a core phenotype associated with the CWC27 spliceosomopathy"
explanation: Sparse eyebrows as part of the ectodermal phenotype.
- reference: PMID:38956876
reference_title: "A novel small deletion in CWC27 gene associated with CWC27-related spliceosomeopathy."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "scant hair, absent eyebrows and thin eyelashes were documented"
explanation: Absent eyebrows in a further patient, the severe end of the same feature.
- name: Sparse eyelashes
category: Dermatological
phenotype_term:
preferred_term: Sparse eyelashes
term:
id: HP:0000653
label: Sparse eyelashes
evidence:
- reference: PMID:36718996
reference_title: "Further delineation of the CWC27-associated spliceosomeopathy: Case report and review of the literature."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "we highlight ectodermal involvement including sparse scalp hair, eyebrows and lashes, pigmentary differences, nail dysplasia, and dental anomalies as a core phenotype associated with the CWC27 spliceosomopathy"
explanation: Sparse eyelashes as part of the ectodermal phenotype.
- name: Nail dysplasia
category: Dermatological
phenotype_term:
preferred_term: Nail dysplasia
term:
id: HP:0002164
label: Nail dysplasia
evidence:
- reference: PMID:36718996
reference_title: "Further delineation of the CWC27-associated spliceosomeopathy: Case report and review of the literature."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "we highlight ectodermal involvement including sparse scalp hair, eyebrows and lashes, pigmentary differences, nail dysplasia, and dental anomalies as a core phenotype associated with the CWC27 spliceosomopathy"
explanation: Nail dysplasia as part of the ectodermal phenotype.
- name: Ichthyosis
category: Dermatological
phenotype_term:
preferred_term: Ichthyosis
term:
id: HP:0008064
label: Ichthyosis
evidence:
- reference: PMID:28285769
reference_title: "Mutations in the Spliceosome Component CWC27 Cause Retinal Degeneration with or without Additional Developmental Anomalies."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "Individuals 4:II-3 and 4:II-4 present extensive hair and skin problems including alopecia, absent eyebrows and eyelashes, ichthyosis, eczema, and keratosis."
explanation: Ichthyosis in one family, reported as a family-specific feature.
- name: Cafe-au-lait spot
category: Dermatological
phenotype_term:
preferred_term: Cafe-au-lait spots
term:
id: HP:0000957
label: Cafe-au-lait spot
evidence:
- reference: PMID:38956876
reference_title: "A novel small deletion in CWC27 gene associated with CWC27-related spliceosomeopathy."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "In addition, craniofacial abnormalities, short statue, brachydactyly, dental anomalies, cafe-au-lait spots, scant hair, absent eyebrows and thin eyelashes were documented."
explanation: Cafe-au-lait spots in a single patient.
- name: Hypodontia
category: Dental
phenotype_term:
preferred_term: Hypoplastic or agenesic teeth
term:
id: HP:0000668
label: Hypodontia
evidence:
- reference: PMID:31481716
reference_title: "Expanding the clinical and molecular spectrum of the CWC27-related spliceosomopathy."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "in addition to hypergonadotropic hypogonadism, hypoplastic/agenesic teeth, and cataracts, not previously associated with such phenotypic spectrum"
explanation: Missing teeth in a single patient; dental anomalies are reported in other patients without further detail.
- name: Hypergonadotropic hypogonadism
category: Endocrine
phenotype_term:
preferred_term: Hypergonadotropic hypogonadism
term:
id: HP:0000815
label: Hypergonadotropic hypogonadism
evidence:
- reference: PMID:31481716
reference_title: "Expanding the clinical and molecular spectrum of the CWC27-related spliceosomopathy."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "in addition to hypergonadotropic hypogonadism, hypoplastic/agenesic teeth, and cataracts, not previously associated with such phenotypic spectrum"
explanation: Hypergonadotropic hypogonadism in a single woman.
genetic:
- name: CWC27
gene_term:
preferred_term: CWC27
term:
id: hgnc:10664
label: CWC27
association: >-
Causative biallelic nonsense, frameshift and splice-site variants acting by
loss of function.
relationship_type: CAUSATIVE
variant_origin: GERMLINE
gene_disease_validity:
- validity_classification: DEFINITIVE
classified_by: CLINGEN
external_id: CGGV:assertion_95089ec9-1b91-4ee0-a743-a780d123aad0-2025-07-03T160000.000Z
evidence:
- reference: CGGV:assertion_95089ec9-1b91-4ee0-a743-a780d123aad0-2025-07-03T160000.000Z
reference_title: "CWC27 / metaphyseal chondrodysplasia-retinitis pigmentosa syndrome (Definitive)"
supports: SUPPORT
evidence_source: OTHER
snippet: "CWC27 | HGNC:10664 | metaphyseal chondrodysplasia-retinitis pigmentosa syndrome | MONDO:0009598 | AR | Definitive"
explanation: ClinGen gene-disease validity record classifying this pair as Definitive.
evidence:
- reference: CGGV:assertion_95089ec9-1b91-4ee0-a743-a780d123aad0-2025-07-03T160000.000Z
reference_title: "CWC27 / metaphyseal chondrodysplasia-retinitis pigmentosa syndrome (Definitive)"
supports: SUPPORT
evidence_source: OTHER
snippet: "The mechanism of pathogenicity is reported to be loss-of-function."
explanation: ClinGen states the disease mechanism.
- reference: PMID:38134094
reference_title: "Retinitis pigmentosa with or without skeletal abnormalities due to homozygous mutations in the CWC27 gene: A case report."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "After testing the whole exome gene sequencing, the gene detection showed that the CWC27 gene was homozygous mutation, c.617(exon7)C>A (p.Ser206Ter)"
explanation: A further homozygous truncating variant in a child with growth failure.
animal_models:
- name: Cwc27 K338fs hypomorphic mouse
species: Mouse
genotype: Cwc27(K338fs/K338fs), CRISPR-Cas9 frameshift in exon 11
publication: PMID:28285769
description: >-
Carries a C-terminal frameshift close to the recurrent human
p.Val335Serfs*13 allele. It is viable and develops late-onset retinal
degeneration without extraocular disease, matching the retina-restricted
human form.
modeled_mechanisms:
- target: Photoreceptor Degeneration
relationship: RECAPITULATES
fidelity: MODERATE
model_scale: TISSUE
description: >-
Reproduces retinal dysfunction and outer retinal thinning, and its
degeneration is reduced by AAV8 Cwc27 augmentation.
limitations: >-
The allele is hypomorphic and does not model the syndromic disease; mouse
retina has no macula, and the mice were followed only to about six months.
divergences:
- divergence_type: SPECIES_MISMATCH
materiality: QUALIFYING
description: >-
The mouse retina is rod-dominated and lacks a macula, so cone-rich
central retinal involvement seen in patients cannot be assessed.
readouts:
- name: Scotopic ERG a-wave and b-wave amplitude
target: Photoreceptor Degeneration
direction: DECREASED
interpretation: Reduced photoreceptor and bipolar responses reflect the retinal dysfunction.
evidence:
- reference: PMID:28285769
reference_title: "Mutations in the Spliceosome Component CWC27 Cause Retinal Degeneration with or without Additional Developmental Anomalies."
supports: SUPPORT
evidence_source: MODEL_ORGANISM
snippet: "ERG showed that the Cwc27K338fs/K338fs mice have about 50% reduction of a-wave and b-wave amplitudes compared with Cwc27K338fs/+ littermates, indicating a compromised retinal function (Figure 4B)."
explanation: The measured ERG reduction.
- name: Outer retina thickness
target: Photoreceptor Degeneration
direction: DECREASED
interpretation: Outer retinal thinning is the histological correlate of photoreceptor loss.
evidence:
- reference: PMID:28285769
reference_title: "Mutations in the Spliceosome Component CWC27 Cause Retinal Degeneration with or without Additional Developmental Anomalies."
supports: SUPPORT
evidence_source: MODEL_ORGANISM
snippet: "(C) H&E staining shows thinning of outer retina in Cwc27K338fs/K338fs mice at the age of 6 months, suggesting photoreceptor degeneration."
explanation: Histology at six months.
evidence:
- reference: PMID:28285769
reference_title: "Mutations in the Spliceosome Component CWC27 Cause Retinal Degeneration with or without Additional Developmental Anomalies."
supports: SUPPORT
evidence_source: MODEL_ORGANISM
snippet: "In mice, disruption of exon 1 (tm1Lex) or exon 3 (tm1b) resulted in a wide range of developmental abnormalities with nearly complete embryonic lethality, while the mice with a homozygous frameshift mutation in exon 11 display a late-onset retinal degeneration phenotype."
explanation: The exon 11 frameshift mouse models the retinal disease.
- target: Retinal Mis-Splicing With Intron Retention
relationship: MEASURES
fidelity: UNKNOWN
model_scale: CELLULAR
description: >-
Retinal bulk and single-cell RNA sequencing reports splicing changes in
this model.
limitations: >-
The splicing changes have not been compared with patient retina, and
which changes cause photoreceptor death is not shown.
readouts:
- name: Retinal alternative splice-site usage and intron retention
target: Retinal Mis-Splicing With Intron Retention
direction: ALTERED
interpretation: Splicing pattern changes in mutant retina.
evidence:
- reference: PMID:34726245
reference_title: "Cwc27, associated with retinal degeneration, functions as a splicing factor in vivo."
supports: SUPPORT
evidence_source: MODEL_ORGANISM
snippet: "Bulk RNA and single cell RNA-sequencing of the mouse retina showed that there were gene expression and splicing pattern changes, including alternative splice site usage and intron retention."
explanation: The measured splicing changes.
- name: Cwc27 tm1b knockout mouse
species: Mouse
genotype: Cwc27(tm1b/tm1b), exon 3 deletion (KOMP)
publication: PMID:28285769
description: >-
A null allele with near-complete pre-weaning lethality. Surviving and
embryonic homozygotes show growth retardation, dystrophic photoreceptors,
neural tube closure failure, limb bud and digit defects.
modeled_mechanisms:
- target: Impaired Embryonic Growth and Craniofacial-Limb Development
relationship: PARTIALLY_RECAPITULATES
fidelity: LOW
model_scale: ORGANISM
description: >-
Shows a developmental requirement for Cwc27 in growth and in
craniofacial and limb development.
limitations: >-
The null phenotype is far more severe than the human syndrome, whose
truncating alleles escape complete nonsense-mediated decay and may retain
residual function; neural tube defects and exencephaly are not human
features.
evidence:
- reference: PMID:28285769
reference_title: "Mutations in the Spliceosome Component CWC27 Cause Retinal Degeneration with or without Additional Developmental Anomalies."
supports: SUPPORT
evidence_source: MODEL_ORGANISM
snippet: "These phenotypes, though much more severe than the human clinical manifestations, demonstrate the delayed growth as well as compromised craniofacial and limb development in the Cwc27 mutants."
explanation: The authors' own statement of fidelity and its limit.
treatments:
- name: Genetic Counseling
description: >-
Counseling for an autosomal recessive disorder with 25 percent recurrence
risk for carrier parents.
treatment_term:
preferred_term: Genetic Counseling
term:
id: NCIT:C15240
label: Genetic Counseling
discussions:
- discussion_id: cwc27_gene_augmentation_human_translation
kind: HUMAN_MODEL_MISMATCH
status: OPEN
attaches_to:
- pathophysiology#Photoreceptor Degeneration
prompt: >-
Would AAV gene augmentation of CWC27 in photoreceptors, which reduces
degeneration in the hypomorphic K338fs mouse, help patients with the
retina-restricted or syndromic disease?
rationale: >-
The rescue was shown only in a hypomorphic mouse allele with late-onset
degeneration, while most patients carry earlier truncations and many have
systemic disease. Whether human photoreceptors are still present at the
age of diagnosis, and whether the truncated proteins interfere with the
transgene, are untested.
evidence:
- reference: PMID:37479075
reference_title: "Gene augmentation therapy to rescue degenerative photoreceptors in a Cwc27 mutant mouse model."
supports: SUPPORT
evidence_source: MODEL_ORGANISM
snippet: "In this study, we demonstrated that subretinal injection of AAV8-GRK-Cwc27-FLAG in mutant mice can improve the functionality and morphology of the retina."
explanation: The mouse rescue result whose human relevance is open.
notes: >-
MONDO names this disease metaphyseal chondrodysplasia-retinitis pigmentosa
syndrome after the historical OMIM title; ClinGen lumps isolated and
syndromic CWC27 cases under one disease because the mechanism and
inheritance do not differ, and this entry does the same. Metaphyseal
chondrodysplasia itself is not described in the CWC27 reports used here, so
it is not curated as a phenotype.