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Slot: histopathology

Histopathologic findings including microscopic morphology, architectural patterns, cellular features, growth patterns, and histologic grading.

URI: dismech:histopathology Alias: histopathology

Applicable Classes

Name Description Modifies Slot
Disease no

Properties

Comments

  • Separate from phenotypes as these are tissue-level microscopic observations
  • Use NCIT Morphologic Finding (C35867) or Histologic Grade (C18000) terms
  • {'For cancer': 'includes grade, differentiation, growth patterns, necrosis'}
  • {'For other diseases': 'may include architectural changes, cellular infiltrates'}

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/monarch-initiative/dismech

Mappings

Mapping Type Mapped Value
self dismech:histopathology
native dismech:histopathology

LinkML Source

name: histopathology
description: Histopathologic findings including microscopic morphology, architectural
  patterns, cellular features, growth patterns, and histologic grading.
comments:
- Separate from phenotypes as these are tissue-level microscopic observations
- Use NCIT Morphologic Finding (C35867) or Histologic Grade (C18000) terms
- '{''For cancer'': ''includes grade, differentiation, growth patterns, necrosis''}'
- '{''For other diseases'': ''may include architectural changes, cellular infiltrates''}'
from_schema: https://w3id.org/monarch-initiative/dismech
rank: 1000
alias: histopathology
domain_of:
- Disease
range: HistopathologyFinding
multivalued: true
inlined: true
inlined_as_list: true