Class: Prevalence

URI: dismech:Prevalence

 classDiagram
    class Prevalence
    click Prevalence href "../Prevalence/"
      Prevalence : evidence





        Prevalence --> "*" EvidenceItem : evidence
        click EvidenceItem href "../EvidenceItem/"



      Prevalence : notes

      Prevalence : percentage





        Prevalence --> "0..1" Any : percentage
        click Any href "../Any/"



      Prevalence : population

      Prevalence : subtype

Slots

Name	Cardinality and Range	Description	Inheritance
subtype	0..1 String		direct
population	0..1 String	Population or cohort description (e	direct
percentage	0..1 Any or  Float or  Integer or  String		direct
evidence	* recommended EvidenceItem		direct
notes	0..1 String		direct

Usages

used by	used in	type	used
Disease	prevalence	range	Prevalence

Identifier and Mapping Information

Schema Source

• from schema: https://w3id.org/monarch-initiative/dismech

Mappings

Mapping Type	Mapped Value
self	dismech:Prevalence
native	dismech:Prevalence

LinkML Source

Direct

name: Prevalence
from_schema: https://w3id.org/monarch-initiative/dismech
slots:
- subtype
- population
- percentage
- evidence
- notes

Induced

name: Prevalence
from_schema: https://w3id.org/monarch-initiative/dismech
attributes:
  subtype:
    name: subtype
    examples:
    - value: Eyelid Myoclonia with Absences
    from_schema: https://w3id.org/monarch-initiative/dismech
    rank: 1000
    alias: subtype
    owner: Prevalence
    domain_of:
    - PhenotypeContext
    - Prevalence
    - ProgressionInfo
    - Phenotype
    - Biochemical
    - HistopathologyFinding
    - Genetic
    range: string
  population:
    name: population
    description: Population or cohort description (e.g., for prevalence or association
      signals)
    examples:
    - value: Global
    from_schema: https://w3id.org/monarch-initiative/dismech
    rank: 1000
    alias: population
    owner: Prevalence
    domain_of:
    - PhenotypeContext
    - Prevalence
    - AssociationSignal
    range: string
  percentage:
    name: percentage
    examples:
    - value: '0.1'
    from_schema: https://w3id.org/monarch-initiative/dismech
    rank: 1000
    alias: percentage
    owner: Prevalence
    domain_of:
    - Prevalence
    range: Any
    any_of:
    - range: float
    - range: integer
    - description: for ranges
      range: string
  evidence:
    name: evidence
    from_schema: https://w3id.org/monarch-initiative/dismech
    rank: 1000
    alias: evidence
    owner: Prevalence
    domain_of:
    - PhenotypeContext
    - Dataset
    - ClinicalTrial
    - ComputationalModel
    - DifferentialDiagnosis
    - Subtype
    - CausalEdge
    - TreatmentMechanismTarget
    - Finding
    - Prevalence
    - ProgressionInfo
    - EpidemiologyInfo
    - Pathophysiology
    - Phenotype
    - Biochemical
    - HistopathologyFinding
    - Genetic
    - Environmental
    - Stage
    - AgentLifeCycle
    - AgentLifeCycleStage
    - AnimalModel
    - Treatment
    - InfectiousAgent
    - Transmission
    - Diagnosis
    - Inheritance
    - Variant
    - ModelingConsideration
    - ClassificationAssignment
    - Definition
    - CriteriaSet
    - AssociationSignal
    - AssociationStatistics
    - ComorbidityHypothesis
    - UpstreamConditionHypothesis
    - MechanisticHypothesis
    range: EvidenceItem
    recommended: true
    multivalued: true
    inlined: true
    inlined_as_list: true
  notes:
    name: notes
    examples:
    - value: Contagious stage where symptoms appear and the bacteria can be spread
        to others.
    from_schema: https://w3id.org/monarch-initiative/dismech
    rank: 1000
    alias: notes
    owner: Prevalence
    domain_of:
    - GeneticContext
    - OnsetDescriptor
    - PhenotypeContext
    - Dataset
    - ClinicalTrial
    - ComputationalModel
    - DifferentialDiagnosis
    - Prevalence
    - ProgressionInfo
    - EpidemiologyInfo
    - Pathophysiology
    - Phenotype
    - Biochemical
    - HistopathologyFinding
    - Genetic
    - Environmental
    - Disease
    - Stage
    - AgentLifeCycle
    - AgentLifeCycleStage
    - Treatment
    - Transmission
    - Diagnosis
    - ClassificationAssignment
    - Definition
    - CriteriaSet
    - TermMapping
    - MappingConsistency
    - ComorbidityAssociation
    - AssociationSignal
    - AssociationMetric
    - AssociationStatistics
    - MechanisticHypothesis
    range: string