Class: OnsetDescriptor

Structured description of age of onset. Combines an HPO onset category with optional quantitative age data and notes.

URI: dismech:OnsetDescriptor

 classDiagram
    class OnsetDescriptor
    click OnsetDescriptor href "../OnsetDescriptor/"
      OnsetDescriptor : max_age_years

      OnsetDescriptor : mean_age_years

      OnsetDescriptor : min_age_years

      OnsetDescriptor : notes

      OnsetDescriptor : onset_category





        OnsetDescriptor --> "0..1" OnsetEnum : onset_category
        click OnsetEnum href "../OnsetEnum/"

Slots

Name	Cardinality and Range	Description	Inheritance
onset_category	0..1 OnsetEnum	HPO onset category (e	direct
mean_age_years	0..1 Float	Mean age of onset in years, as reported in a cohort study	direct
min_age_years	0..1 Float	Minimum (earliest) age of onset in years	direct
max_age_years	0..1 Float	Maximum (latest) age of onset in years	direct
notes	0..1 String		direct

Usages

used by	used in	type	used
PhenotypeContext	onset	range	OnsetDescriptor

Identifier and Mapping Information

Schema Source

• from schema: https://w3id.org/monarch-initiative/dismech

Mappings

Mapping Type	Mapped Value
self	dismech:OnsetDescriptor
native	dismech:OnsetDescriptor

LinkML Source

Direct

name: OnsetDescriptor
description: Structured description of age of onset. Combines an HPO onset category
  with optional quantitative age data and notes.
from_schema: https://w3id.org/monarch-initiative/dismech
slots:
- onset_category
- mean_age_years
- min_age_years
- max_age_years
- notes

Induced

name: OnsetDescriptor
description: Structured description of age of onset. Combines an HPO onset category
  with optional quantitative age data and notes.
from_schema: https://w3id.org/monarch-initiative/dismech
attributes:
  onset_category:
    name: onset_category
    description: HPO onset category (e.g., CHILDHOOD, NEONATAL). Use when an approximate
      developmental stage is known.
    from_schema: https://w3id.org/monarch-initiative/dismech
    rank: 1000
    alias: onset_category
    owner: OnsetDescriptor
    domain_of:
    - OnsetDescriptor
    range: OnsetEnum
  mean_age_years:
    name: mean_age_years
    description: Mean age of onset in years, as reported in a cohort study.
    from_schema: https://w3id.org/monarch-initiative/dismech
    rank: 1000
    alias: mean_age_years
    owner: OnsetDescriptor
    domain_of:
    - OnsetDescriptor
    range: float
  min_age_years:
    name: min_age_years
    description: Minimum (earliest) age of onset in years.
    from_schema: https://w3id.org/monarch-initiative/dismech
    rank: 1000
    alias: min_age_years
    owner: OnsetDescriptor
    domain_of:
    - OnsetDescriptor
    range: float
  max_age_years:
    name: max_age_years
    description: Maximum (latest) age of onset in years.
    from_schema: https://w3id.org/monarch-initiative/dismech
    rank: 1000
    alias: max_age_years
    owner: OnsetDescriptor
    domain_of:
    - OnsetDescriptor
    range: float
  notes:
    name: notes
    examples:
    - value: Contagious stage where symptoms appear and the bacteria can be spread
        to others.
    from_schema: https://w3id.org/monarch-initiative/dismech
    rank: 1000
    alias: notes
    owner: OnsetDescriptor
    domain_of:
    - GeneticContext
    - OnsetDescriptor
    - PhenotypeContext
    - Dataset
    - ClinicalTrial
    - ComputationalModel
    - DifferentialDiagnosis
    - Prevalence
    - ProgressionInfo
    - EpidemiologyInfo
    - Pathophysiology
    - Phenotype
    - Biochemical
    - HistopathologyFinding
    - Genetic
    - Environmental
    - Disease
    - Stage
    - AgentLifeCycle
    - AgentLifeCycleStage
    - Treatment
    - Transmission
    - Diagnosis
    - ClassificationAssignment
    - Definition
    - CriteriaSet
    - TermMapping
    - MappingConsistency
    - ComorbidityAssociation
    - AssociationSignal
    - AssociationMetric
    - AssociationStatistics
    - MechanisticHypothesis
    range: string