Class: DiseaseClassifications

Container for all classification assignments for a disease

 classDiagram
    class DiseaseClassifications
    click DiseaseClassifications href "../DiseaseClassifications/"
      DiseaseClassifications : channelopathy_category





        DiseaseClassifications --> "0..1" ChannelopathyAssignment : channelopathy_category
        click ChannelopathyAssignment href "../ChannelopathyAssignment/"



      DiseaseClassifications : harrisons_chapter





        DiseaseClassifications --> "*" HarrisonsChapterAssignment : harrisons_chapter
        click HarrisonsChapterAssignment href "../HarrisonsChapterAssignment/"



      DiseaseClassifications : icdo_morphology





        DiseaseClassifications --> "0..1" ICDOMorphologyAssignment : icdo_morphology
        click ICDOMorphologyAssignment href "../ICDOMorphologyAssignment/"



      DiseaseClassifications : iuis_category





        DiseaseClassifications --> "0..1" IUISAssignment : iuis_category
        click IUISAssignment href "../IUISAssignment/"



      DiseaseClassifications : lysosomal_storage_category





        DiseaseClassifications --> "0..1" LysosomalStorageAssignment : lysosomal_storage_category
        click LysosomalStorageAssignment href "../LysosomalStorageAssignment/"



      DiseaseClassifications : mechanistic_category





        DiseaseClassifications --> "*" MechanisticNosologyAssignment : mechanistic_category
        click MechanisticNosologyAssignment href "../MechanisticNosologyAssignment/"

Slots

Name	Cardinality and Range	Description	Inheritance
icdo_morphology	0..1 ICDOMorphologyAssignment	ICD-O morphology classification (for neoplastic diseases)	direct
harrisons_chapter	* HarrisonsChapterAssignment	Harrison's internal medicine chapter classification	direct
lysosomal_storage_category	0..1 LysosomalStorageAssignment	Lysosomal storage disease biochemical classification	direct
mechanistic_category	* MechanisticNosologyAssignment	Mechanistic/pathway-based disease classification	direct
iuis_category	0..1 IUISAssignment	IUIS primary immunodeficiency classification	direct
channelopathy_category	0..1 ChannelopathyAssignment	Channelopathy organ system classification	direct

Usages

used by	used in	type	used
Disease	classifications	range	DiseaseClassifications

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/monarch-initiative/dismech

Mappings

Mapping Type	Mapped Value
self	dismech:DiseaseClassifications
native	dismech:DiseaseClassifications

LinkML Source

Direct

name: DiseaseClassifications
description: Container for all classification assignments for a disease
from_schema: https://w3id.org/monarch-initiative/dismech
slots:
- icdo_morphology
- harrisons_chapter
- lysosomal_storage_category
- mechanistic_category
- iuis_category
- channelopathy_category

Induced

name: DiseaseClassifications
description: Container for all classification assignments for a disease
from_schema: https://w3id.org/monarch-initiative/dismech
attributes:
  icdo_morphology:
    name: icdo_morphology
    description: ICD-O morphology classification (for neoplastic diseases)
    from_schema: https://w3id.org/monarch-initiative/dismech
    rank: 1000
    alias: icdo_morphology
    owner: DiseaseClassifications
    domain_of:
    - DiseaseClassifications
    range: ICDOMorphologyAssignment
    inlined: true
  harrisons_chapter:
    name: harrisons_chapter
    description: Harrison's internal medicine chapter classification
    from_schema: https://w3id.org/monarch-initiative/dismech
    rank: 1000
    alias: harrisons_chapter
    owner: DiseaseClassifications
    domain_of:
    - DiseaseClassifications
    range: HarrisonsChapterAssignment
    multivalued: true
    inlined: true
  lysosomal_storage_category:
    name: lysosomal_storage_category
    description: Lysosomal storage disease biochemical classification
    from_schema: https://w3id.org/monarch-initiative/dismech
    rank: 1000
    alias: lysosomal_storage_category
    owner: DiseaseClassifications
    domain_of:
    - DiseaseClassifications
    range: LysosomalStorageAssignment
    inlined: true
  mechanistic_category:
    name: mechanistic_category
    description: Mechanistic/pathway-based disease classification
    from_schema: https://w3id.org/monarch-initiative/dismech
    rank: 1000
    alias: mechanistic_category
    owner: DiseaseClassifications
    domain_of:
    - DiseaseClassifications
    range: MechanisticNosologyAssignment
    multivalued: true
    inlined: true
  iuis_category:
    name: iuis_category
    description: IUIS primary immunodeficiency classification
    from_schema: https://w3id.org/monarch-initiative/dismech
    rank: 1000
    alias: iuis_category
    owner: DiseaseClassifications
    domain_of:
    - DiseaseClassifications
    range: IUISAssignment
    inlined: true
  channelopathy_category:
    name: channelopathy_category
    description: Channelopathy organ system classification
    from_schema: https://w3id.org/monarch-initiative/dismech
    rank: 1000
    alias: channelopathy_category
    owner: DiseaseClassifications
    domain_of:
    - DiseaseClassifications
    range: ChannelopathyAssignment
    inlined: true