Kariminejad Neurodevelopmental Syndrome (KAREVS) — Comprehensive Disease Characterization

Disease: Kariminejad Neurodevelopmental Syndrome (KAREVS) MONDO: MONDO:0975795 · OMIM: #620937 · Gene: RBSN (rabenosyn-5 / ZFYVE20; OMIM *609511; HGNC:20759) Category: Mendelian, autosomal recessive Evidence base: Predominantly human clinical (2 families, 6 individuals) plus in-vitro/cell-biology and model-organism data on RBSN/rabenosyn-5 function.

Note on evidence strength. KAREVS is an ultra-rare, recently delineated Mendelian disorder described in only two families. Consequently, most clinical statements derive from small aggregated case-level reports (OMIM/primary papers), and many template fields (formal prevalence, survival statistics, QoL instruments, trials) have no published data; these are marked Not available. Mechanistic claims are supported by direct functional studies of RBSN in patient cells and model organisms.


Summary (Answer to the Research Question)

Kariminejad Neurodevelopmental Syndrome (KAREVS) is an autosomal recessive neurodevelopmental/neuromuscular disorder caused by biallelic missense variants in the FYVE domain of RBSN (rabenosyn-5), an endosomal Rab4/Rab5 effector. It is characterized by global developmental delay/mild-to-moderate intellectual disability, progressive muscle weakness (myopathy, sometimes with sensorimotor neuropathy or spastic paraplegia), distinctive facial dysmorphism, ophthalmoplegia/ocular anomalies, and variable, nonspecific brain-imaging abnormalities (leukoencephalopathy/delayed myelination). Mechanistically, the FYVE variants abolish binding to phosphatidylinositol-3-phosphate (PI3P), preventing rabenosyn-5 recruitment to early endosomes and thereby delaying endosomal maturation and impairing endolysosomal degradation while sparing endosomal recycling — a "separation-of-function" defect. Management is entirely supportive; recurrence risk is 25% and consanguinity is the principal risk factor.


1. Disease Information

Overview. KAREVS (OMIM #620937) is a rare autosomal recessive developmental disorder featuring global developmental delay (delayed walking by a few years, speech delay), impaired intellectual development, hypotonia and progressive muscle weakness, dysmorphic facial features, and variable nonspecific brain-imaging abnormalities. It was first delineated clinically by Kariminejad et al. (2015) in three Iranian siblings and molecularly resolved (gene = RBSN) by Paul et al. (2022) [PMID 26192890; P35652444].

"two distinct RBSN missense variants are responsible for a novel Mendelian disorder consisting of progressive muscle weakness, facial dysmorphisms, ophthalmoplegia and intellectual disability." — Paul et al., 2022 (P35652444)

Key identifiers. - OMIM: #620937 (phenotype); *609511 (RBSN gene) - MONDO: MONDO:0975795 - MedGen: C5975371 - Orphanet: No dedicated ORPHAcode identified as of report date (Not available) - ICD-10: No specific code; maps to Q87.8 / F79 (general dysmorphic/ID categories) (no dedicated code) - ICD-11: No specific code; would fall under LD2F.1Y / 6A00 classes (no dedicated code) - MeSH: No dedicated MeSH heading (Not available)

Synonyms / alternative names. Kariminejad neurodevelopmental syndrome; KAREVS; "Intellectual disability, muscle weakness and characteristic face" (original descriptive title, 3p24.3–p25.3-linked recessive syndrome). Not to be confused with Kariminejad-Nafissi syndrome (a distinct skeletal dysplasia).

Data provenance. Disease-level aggregated resources (OMIM, MONDO, MedGen) built from individual patient case reports (2 families, n=6). No EHR/registry-scale data exist.


2. Etiology

Causal factor — genetic (Mendelian, monogenic). KAREVS is caused by homozygous missense variants in RBSN. No environmental, infectious, or multifactorial etiology is involved.

Genetic risk factors. - Causal variants: c.547G>A (p.Gly183Arg) — Iranian family; c.538C>G (p.Arg180Gly) — Canadian Cree family (both NM_022340.3, FYVE domain) [PMID 35652444]. - Consanguinity is the dominant risk factor: both families are consanguineous and homozygous by descent. - Being a heterozygous carrier of a pathogenic RBSN allele confers risk of affected offspring only when both parents carry it (AR). - Modifier genes: none identified; phenotypic variability (below) is currently unexplained (candidate modifiers not studied).

Environmental / lifestyle / occupational risk factors. Not applicable — no non-genetic contributors are known or expected for a monogenic recessive disorder.

Protective factors. None described. In principle, absence of a second pathogenic allele (heterozygosity) is fully protective (carriers are unaffected) [PMID 26192890].

Gene–environment interactions. None described.


3. Phenotypes

All phenotypes derive from n=6 patients; "frequencies" are qualitative/small-count estimates from Kariminejad 2015 (Iranian family, F1) and Paul 2022 / OMIM clinical synopsis (Cree family, F2).

Phenotype Type Onset Severity/Course Frequency HPO
Intellectual disability (mild–moderate; IQ 42, 53) Cognitive/behavioral Childhood Stable–mild, lifelong All (6/6) HP:0001249
Global developmental delay (motor, speech) Sign Infancy/early childhood Walking 18–25 mo All HP:0001263 / HP:0000750 / HP:0001270
Progressive muscle weakness / myopathy Sign Childhood Progressive All HP:0003198 / HP:0001324
Hypotonia Sign Early Variable Frequent HP:0001252
Distinctive facies (highly arched eyebrows, downslanting palpebral fissures, prominent nasal bridge/nose, columella below alae nasi, narrow mouth, narrow/high palate, maxillary hypoplasia, small chin) Physical Congenital Stable All HP:0002553; HP:0000494; HP:0000426; HP:0000160; HP:0000189; HP:0000347
Ophthalmoplegia / impaired eye abduction; ptosis; amblyopia; hypermetropia Sign Childhood Variable Subset (≥1 each) HP:0000602; HP:0000508; HP:0000646; HP:0000540
Dental caries Sign Childhood — Reported HP:0000670
Short stature Growth Childhood — Reported (OMIM) HP:0004322
Leukoencephalopathy / delayed myelination / white-matter hyperintensities Lab/imaging Childhood Nonspecific 2/3 F1 HP:0002352; HP:0012448
Hippocampal atrophy; enlarged ventricles Imaging Childhood — Single patients HP:0410170; HP:0002119
Spastic paraplegia Sign Childhood Progressive 2/3 F2 HP:0001258
Sensorimotor peripheral neuropathy Sign Childhood — F2 HP:0007141
Elevated serum CK; elevated lactate; hyperlipidemia; microcephaly Lab/physical Childhood — Single patients (F2) HP:0003236; HP:0002151; HP:0003077; HP:0000252
Intention tremor Sign Childhood — 1 patient HP:0002080

"...mild intellectual disability, progressive muscle weakness, and characteristic facies... highly arched eyebrows, down-slanting palpebral fissures, prominent nasal bridge, prominent nose, columella extending below alae nasi, narrow mouth, narrow palate, and dental caries, and in one of them an inability to abduct the left eye." — Kariminejad et al., 2015 (P26192890)

Quality-of-life impact. No formal QoL instruments (EQ-5D/SF-36/PROMIS) have been applied (Not available). Expected functional impact: lifelong intellectual disability limiting independent living, plus progressive weakness/spasticity affecting mobility and self-care.


4. Genetic / Molecular Information

"distinct germline mutations in RBSN cause non-overlapping phenotypes with specific and discrete endolysosomal cellular defects." — Paul et al., 2022 (P35652444)

Ontology. Gene product: FYVE-domain Rab effector. GO-MF: phosphatidylinositol-3-phosphate binding GO:0032266; Rab GTPase binding GO:0017137. CHEBI: phosphatidylinositol 3-phosphate CHEBI:26034.


5. Environmental Information

Not applicable. KAREVS is a monogenic recessive disorder with no established environmental factors, lifestyle contributors, or infectious agents. No toxin/radiation/occupational exposures are implicated (searches of CTD/PubMed yield no environmental modifiers).


6. Mechanism / Pathophysiology

Ordered causal chain (initiating lesion → clinical manifestation)

  1. Homozygous FYVE-domain missense variant (p.Gly183Arg or p.Arg180Gly) in RBSN results in an amino-acid substitution at a conserved residue of the phosphoinositide-binding FYVE finger. (Demonstrated — genetics/segregation.)
  2. The altered FYVE domain abolishes binding to phosphatidylinositol-3-phosphate (PI3P). (Demonstrated — biochemistry.)
  3. Loss of PI3P binding prevents translocation/recruitment of rabenosyn-5 to early endosomal membranes (mutant protein fails to co-localize with EEA1). (Demonstrated — cell imaging in patient fibroblasts.)
  4. Endosome-unassociated rabenosyn-5 cannot properly scaffold the Rab5–VPS45–SNARE fusion/maturation machinery, leading to delayed early-to-late endosome maturation and impaired delivery of cargo to lysosomes. (Demonstrated — cargo tagged for lysosomal degradation accumulates.)
  5. Critically, the endosomal recycling arm is spared (separation-of-function) — the pathway branches here, distinguishing KAREVS from the G425R recycling-defect disorder. (Demonstrated.)
  6. Impaired endolysosomal degradation results in accumulation of undegraded cargo and disturbed membrane/receptor homeostasis in post-mitotic, trafficking-dependent cells (neurons, myofibers). (Inferred from cellular data → tissue phenotype.)
  7. This leads to neuronal/white-matter dysfunction (→ intellectual disability, leukoencephalopathy, delayed myelination) and myofiber dysfunction (→ progressive myopathy; ± neuropathy/spastic paraplegia), plus developmental effects on craniofacial patterning (→ dysmorphism). (Inferred.)

Detail by category

Cell types (CL): neuron CL:0000540; skeletal muscle fiber CL:0000188; fibroblast (model) CL:0000057; oligodendrocyte (myelination, inferred) CL:0000128. Biological process (GO): endosome to lysosome transport GO:0008333; early endosome to late endosome transport GO:0045022; endosomal transport GO:0016197; regulation of endosome size/maturation; vesicle fusion GO:0006906.


7. Anatomical Structures Affected


8. Temporal Development


9. Inheritance and Population


10. Diagnostics

NCIT: Whole Exome Sequencing; Whole Genome Sequencing; Genetic Testing; Magnetic Resonance Imaging; Electromyography.


11. Outcome / Prognosis


12. Treatment

No disease-modifying or curative therapy exists. Management is supportive, multidisciplinary, and symptom-directed (extrapolated from standard care for AR syndromic ID/myopathy; no KAREVS-specific trials).

NCIT: Physical Therapy; Occupational Therapy; Speech Therapy; Supportive Care; Rehabilitation Therapy; Baclofen.


13. Prevention

NCIT: Genetic Counseling; Genetic Carrier Screening; Prenatal Diagnosis.


14. Other Species / Natural Disease


15. Model Organisms


Supported vs. Refuted Hypotheses

Supported: - KAREVS is caused by biallelic FYVE-domain RBSN missense variants (AR) — strongly supported (segregation in 2 families + functional data) [PMID 26192890; P35652444]. - Mechanism is loss of PI3P binding → endosomal mislocalization → delayed endosomal maturation with spared recycling (separation-of-function) — supported (patient-cell biochemistry/imaging) [PMID 35652444]. - Distinct RBSN variants cause distinct disorders via distinct endolysosomal defects — supported [PMID 35652444; P25233840].

Refuted / excluded: - Environmental, infectious, or chromosomal causation — excluded (purely monogenic). - Hematologic involvement as part of KAREVS — excluded in reported families (distinguishes from RBSN congenital myelofibrosis). - Complete-null mechanism — refuted (null is lethal; disease requires hypomorphic alleles).

Limitations and Future Directions


Key References (PMIDs)