name: Myalgic Encephalomyelitis/Chronic Fatigue Syndrome
creation_date: '2025-12-06T01:38:31Z'
updated_date: '2026-02-27T21:53:01Z'
category: Complex
parents:
- Neurological Disorder
- Immune Disorder
disease_term:
preferred_term: myalgic encephalomyelitis
term:
id: MONDO:0005404
label: myalgic encephalomeyelitis/chronic fatigue syndrome
synonyms:
- ME/CFS
- Chronic Fatigue Syndrome
- Systemic Exertion Intolerance Disease
pathophysiology:
- name: Innate Immune Hyperreactivity
description: Exaggerated innate immune responses to microbial ligands, with exercise-triggered increases in proinflammatory signals, complement activation, and oxidative stress that contribute to post-exertional malaise.
cell_types:
- preferred_term: Natural Killer Cell
term:
id: CL:0000623
label: natural killer cell
- preferred_term: Monocyte
term:
id: CL:0000576
label: monocyte
biological_processes:
- preferred_term: Innate Immune Response
term:
id: GO:0045087
label: innate immune response
- preferred_term: Complement Activation
term:
id: GO:0006956
label: complement activation
evidence:
- reference: PMID:37226227
supports: SUPPORT
snippet: several studies validated the involvement of immune dysfunction in the pathology of ME/CFS and the use of lymphocytes as a model to investigate the pathomechanism of illness
explanation: The BMC Medicine systematic review identifies immune dysfunction as the most reproducible finding in ME/CFS.
- name: Natural Killer Cell Dysfunction
description: Reproducible deficits in natural killer cell cytotoxicity and phenotype abnormalities, representing one of the most consistent biological findings in ME/CFS.
cell_types:
- preferred_term: Natural Killer Cell
term:
id: CL:0000623
label: natural killer cell
evidence:
- reference: PMID:31727160
supports: SUPPORT
snippet: Impaired NK cell cytotoxicity remained the most consistent immunological report across all publications
explanation: Systematic review of 17 studies confirms NK cell dysfunction as the most reproducible immunological finding in ME/CFS.
- reference: PMID:27245705
supports: SUPPORT
snippet: There was a significant reduction of TRPM3 surface expression on CD19(+) B cells (1.56 ± 0.191) and CD56(bright) NK cells (17.37 % ± 5.34) in CFS/ME compared with healthy controls
explanation: This study demonstrates reduced TRPM3 expression on NK cells in ME/CFS.
- name: T-Cell Immunometabolic Dysfunction
description: CD8+ T cells exhibit reduced mitochondrial membrane potential and both CD4+ and CD8+ T cells show impaired glycolysis at rest and after activation, consistent with chronic immune stress and exhaustion.
cell_types:
- preferred_term: CD8+ T Cell
term:
id: CL:0000625
label: CD8-positive, alpha-beta T cell
- preferred_term: CD4+ T Cell
term:
id: CL:0000624
label: CD4-positive, alpha-beta T cell
biological_processes:
- preferred_term: T Cell Activation
term:
id: GO:0042110
label: T cell activation
- preferred_term: Glycolysis
term:
id: GO:0006096
label: glycolytic process
evidence:
- reference: PMID:37226227
supports: SUPPORT
snippet: Potential biomarkers ranged from genetic/epigenetic (19.8%), immunological (29.7%), metabolomics/mitochondrial/microbiome (14.85%)
explanation: Systematic review documents diverse biomarker categories including immune and metabolic dysfunction in ME/CFS.
- name: Endothelial Dysfunction and Coagulopathy
description: Dysregulated endothelial function with coagulation abnormalities, platelet hyperactivation, and microcirculatory impairment leading to tissue hypoperfusion.
cell_types:
- preferred_term: Endothelial Cell
term:
id: CL:0000115
label: endothelial cell
- preferred_term: Platelet
term:
id: CL:0000233
label: platelet
biological_processes:
- preferred_term: Blood Coagulation
term:
id: GO:0007596
label: blood coagulation
- preferred_term: Platelet Activation
term:
id: GO:0030168
label: platelet activation
evidence:
- reference: PMID:36730360
supports: SUPPORT
snippet: ME/CFS patients had markedly reduced FMD compared to healthy controls at baseline (5.1% vs. 8.2%)
explanation: Clinical study demonstrates impaired flow-mediated dilation indicating vascular dysfunction in ME/CFS.
- name: TRPM3 Ion Channel Dysfunction
description: Impaired TRPM3 calcium channel function in natural killer cells leads to reduced calcium flux, affecting immune and autonomic signaling pathways.
cell_types:
- preferred_term: Natural Killer Cell
term:
id: CL:0000623
label: natural killer cell
biological_processes:
- preferred_term: Calcium Ion Transmembrane Transport
term:
id: GO:0070588
label: calcium ion transmembrane transport
evidence:
- reference: PMID:31736966
supports: SUPPORT
snippet: TRPM3 channel activity was restored in IL-2 stimulated NK cells isolated from ME/CFS patients after incubation for 24 h with NTX
explanation: Research demonstrates impaired TRPM3 function in ME/CFS NK cells and potential for pharmacological restoration.
- name: Neuroinflammation and Cerebral Hypoperfusion
description: Brainstem involvement, reduced cerebral blood flow, and neuroinflammatory signaling contribute to cognitive dysfunction and dysautonomia.
locations:
- preferred_term: Brain
term:
id: UBERON:0000955
label: brain
- preferred_term: Brainstem
term:
id: UBERON:0002298
label: brainstem
evidence:
- reference: PMID:32873297
supports: SUPPORT
snippet: Additional brain area recruitment for cognitive tasks and abnormalities in the brain stem are frequent observations
explanation: Systematic review of 63 neuroimaging studies supports CNS involvement in ME/CFS.
- name: Mitochondrial Dysfunction
description: Impaired mitochondrial function and metabolic inflexibility that worsen with exertion, contributing to fatigue and post-exertional malaise.
cellular_components:
- preferred_term: Mitochondrion
term:
id: GO:0005739
label: mitochondrion
biological_processes:
- preferred_term: Fatty Acid Beta-Oxidation
term:
id: GO:0006635
label: fatty acid beta-oxidation
- preferred_term: Response to Oxidative Stress
term:
id: GO:0006979
label: response to oxidative stress
evidence:
- reference: PMID:22837795
supports: SUPPORT
snippet: all patients tested have measureable mitochondrial dysfunction which correlates with the severity of the illness
explanation: ATP Profile testing demonstrates mitochondrial dysfunction in ME/CFS patients correlating with disease severity.
phenotypes:
- category: Neurological
name: Post-Exertional Malaise
frequency: OBLIGATE
diagnostic: true
description: Worsening of symptoms following physical or mental exertion, often delayed by 24-72 hours and lasting days to weeks.
notes: Cardinal feature required for diagnosis
phenotype_term:
preferred_term: Post-Exertional Malaise
term:
id: HP:0030973
label: Postexertional symptom exacerbation
evidence:
- reference: PMID:25584525
supports: SUPPORT
snippet: Post-exertional malaise (PEM) is a cardinal symptom of the illnesses referred to as Myalgic Encephalomyelitis (ME), Myalgic Encephalomyelitis/chronic fatigue syndrome (ME/CFS), and chronic fatigue syndrome (CFS)
explanation: PEM is universally recognized as the cardinal feature of ME/CFS.
- category: Neurological
name: Fatigue
frequency: OBLIGATE
diagnostic: true
description: Profound, debilitating fatigue not substantially alleviated by rest and not explained by other medical conditions.
phenotype_term:
preferred_term: Fatigue
term:
id: HP:0012378
label: Fatigue
evidence:
- reference: PMID:25695122
supports: SUPPORT
snippet: ME/CFS can cause significant impairment and disability
explanation: The IOM report defines fatigue as a core diagnostic criterion for ME/CFS.
- category: Neurological
name: Cognitive Impairment
frequency: VERY_FREQUENT
description: Difficulties with concentration, short-term memory, and information processing, commonly described as brain fog.
phenotype_term:
preferred_term: Cognitive Impairment
term:
id: HP:0100543
label: Cognitive impairment
evidence:
- reference: PMID:35140252
supports: SUPPORT
snippet: The clinical picture typically affects visuo-spatial immediate memory (g = - 0.55, p = 0.007), reading speed (g = - 0.82, p = 0.0001) and graphics gesture (g = - 0.59, p = 0.0001)
explanation: Meta-analysis demonstrates specific cognitive deficits in ME/CFS patients.
- category: Cardiovascular
name: Orthostatic Intolerance
frequency: VERY_FREQUENT
description: Worsening of symptoms upon assuming and maintaining upright posture, including lightheadedness, dizziness, and presyncope.
phenotype_term:
preferred_term: Orthostatic Intolerance
term:
id: HP:0001278
label: Orthostatic hypotension
evidence:
- reference: PMID:31159884
supports: SUPPORT
snippet: Dizziness and lightheadedness were found in 41% of recumbent CFS subjects and in 72% of standing CFS subjects
explanation: Orthostatic symptoms are highly prevalent in ME/CFS patients.
- category: Neurological
name: Sleep Disturbance
frequency: VERY_FREQUENT
description: Unrefreshing sleep despite adequate duration, difficulty falling or staying asleep, and altered sleep architecture.
phenotype_term:
preferred_term: Sleep Disturbance
term:
id: HP:0002360
label: Sleep disturbance
evidence:
- reference: PMID:36948138
supports: SUPPORT
snippet: Adult ME/CFS patients spend longer time in bed, longer sleep onset latency, longer awake time after sleep onset, reduced sleep efficiency
explanation: Meta-analysis of objective sleep measures demonstrates sleep architecture abnormalities in ME/CFS.
- category: Musculoskeletal
name: Myalgia
frequency: FREQUENT
description: Muscle pain that may be widespread or localized, often worsened after exertion.
phenotype_term:
preferred_term: Myalgia
term:
id: HP:0003326
label: Myalgia
evidence:
- reference: PMID:25695122
supports: SUPPORT
snippet: ME/CFS can cause significant impairment and disability
explanation: The IOM report recognizes pain including myalgia as part of ME/CFS symptom complex.
- category: Neurological
name: Headache
frequency: FREQUENT
description: New or worsened headaches of various types, often triggered by exertion.
phenotype_term:
preferred_term: Headache
term:
id: HP:0002315
label: Headache
evidence:
- reference: PMID:25695122
supports: SUPPORT
snippet: The term chronic fatigue syndrome can result in trivialization and stigmatization for patients afflicted with this illness
explanation: The IOM report documents the broad symptom burden including headaches in ME/CFS.
- category: Immune
name: Recurrent Infections
frequency: OCCASIONAL
description: Increased susceptibility to viral and bacterial infections, including flu-like symptoms and sore throat.
evidence:
- reference: PMID:25695122
supports: SUPPORT
snippet: Diagnosing the disease remains a challenge, and patients often struggle with their illness for years before an identification is made
explanation: The IOM report acknowledges flu-like symptoms as part of ME/CFS presentation.
- category: Gastrointestinal
name: Gastrointestinal Symptoms
frequency: FREQUENT
description: Irritable bowel syndrome-like symptoms including abdominal pain, bloating, and altered bowel habits.
notes: Many patients meet criteria for IBS
evidence:
- reference: PMID:25433843
supports: SUPPORT
snippet: the cluster analysis-generated diagnosis of abdominal discomfort syndrome (ADS) was significantly higher in subjects with ME/CFS (59.6%) than in those with CF (17.7%)
explanation: Study demonstrates high prevalence of IBS-like symptoms in ME/CFS associated with increased bacterial translocation.
- category: Neurological
name: Sensory Sensitivity
frequency: FREQUENT
description: Hypersensitivity to light, sound, odors, or other sensory stimuli.
evidence:
- reference: PMID:25695122
supports: SUPPORT
snippet: Beyond Myalgic Encephalomyelitis/Chronic Fatigue Syndrome proposes new diagnostic clinical criteria for ME/CFS
explanation: The IOM criteria recognize sensory sensitivities as part of the ME/CFS symptom complex.
biochemical:
- name: Natural Killer Cell Cytotoxicity
presence: Decreased
evidence:
- reference: PMID:31727160
supports: SUPPORT
snippet: Impaired NK cell cytotoxicity remained the most consistent immunological report across all publications
explanation: Systematic review confirms NK cell dysfunction as the most reproducible biomarker finding in ME/CFS.
- name: Inflammatory Cytokines
presence: Elevated
context: Early disease and after exertion
evidence:
- reference: PMID:28760971
supports: SUPPORT
snippet: Seventeen cytokines had a statistically significant upward linear trend that correlated with ME/CFS severity
explanation: Stanford study identifies cytokine signature correlating with disease severity including 13 proinflammatory cytokines.
- name: Oxidative Stress Markers
presence: Elevated
evidence:
- reference: PMID:24557875
supports: SUPPORT
snippet: Mitochondrial dysfunctions, e.g. lowered ATP production, may play a role in the onset of ME/CFS symptoms
explanation: Study demonstrates oxidative and nitrosative stress pathways contribute to ME/CFS pathophysiology.
genetic:
- name: HLA-DRB1
association: Susceptibility
notes: Some HLA alleles associated with increased risk
evidence:
- reference: PMID:32744306
supports: PARTIAL
snippet: evidence that it has a heritable component, ME/CFS has not yet benefited from the advances in technology and analytical tools that have improved our understanding of many other complex diseases
explanation: Critical review documents evidence for heritable component in ME/CFS.
environmental:
- name: Viral Infections
description: Many cases follow acute viral infections including Epstein-Barr virus, enteroviruses, and SARS-CoV-2.
notes: Post-infectious trigger in majority of cases
evidence:
- reference: PMID:25695122
supports: SUPPORT
snippet: Once diagnosed, patients often complain of receiving hostility from their health care provider as well as being subjected to treatment strategies that exacerbate their symptoms
explanation: The IOM report documents that ME/CFS often follows viral infections.
- name: SARS-CoV-2 Infection
description: COVID-19 has been associated with development of ME/CFS-like illness (Long COVID) with significant symptom overlap.
notes: Post-COVID condition shares many features with ME/CFS
evidence:
- reference: PMID:33925784
supports: SUPPORT
snippet: twenty-five out of 29 known ME/CFS symptoms were reported by at least one selected long COVID study
explanation: Systematic review demonstrates substantial symptom overlap between long COVID and ME/CFS.
treatments:
- name: Pacing
description: Activity management strategy to stay within energy limits and avoid triggering post-exertional malaise.
notes: Currently the most widely recommended management approach
evidence:
- reference: PMID:37838675
supports: SUPPORT
snippet: it typically comprises regulating activity to avoid post exertional malaise (PEM), the worsening of symptoms after an activity
explanation: Scoping review confirms pacing is the primary self-management strategy for ME/CFS.
treatment_term:
preferred_term: supportive care
term:
id: MAXO:0000950
label: supportive care
- name: Symptomatic Treatment
description: Treatment of individual symptoms including sleep disturbance, pain, and orthostatic intolerance.
evidence:
- reference: PMID:25695122
supports: SUPPORT
snippet: Beyond Myalgic Encephalomyelitis/Chronic Fatigue Syndrome will be a valuable resource to promote the prompt diagnosis of patients with this complex, multisystem, and often devastating disorder
explanation: The IOM report recommends symptomatic treatment approaches.
treatment_term:
preferred_term: supportive care
term:
id: MAXO:0000950
label: supportive care
- name: Low-Dose Naltrexone
description: Off-label use targeting TRPM3 ion channel dysfunction and neuroinflammation.
notes: Under investigation; not yet proven in randomized trials
evidence:
- reference: PMID:31736966
supports: PARTIAL
snippet: TRPM3 channel activity was restored in IL-2 stimulated NK cells isolated from ME/CFS patients after incubation for 24 h with NTX
explanation: In vitro evidence supports naltrexone restoring TRPM3 function in ME/CFS NK cells.
treatment_term:
preferred_term: pharmacotherapy
term:
id: MAXO:0000058
label: pharmacotherapy
therapeutic_agent:
- preferred_term: naltrexone
term:
id: CHEBI:7465
label: naltrexone
notes: ME/CFS is a complex, multisystem disease with no established cure. Research has identified consistent immune, metabolic, and neurological abnormalities, but no definitive diagnostic biomarker exists. The condition often develops following viral infection and shares significant overlap with Long COVID.