A rare autosomal recessive lysosomal storage disorder caused by deficiency of lysosomal beta-mannosidase enzyme, leading to accumulation of mannose-containing oligosaccharides in tissues and body fluids. Clinical manifestations include intellectual disability, hearing loss, and variable neurological involvement.
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name: Beta Mannosidosis
creation_date: '2025-12-19T01:18:09Z'
updated_date: "2026-05-21T07:47:19Z"
description: >
A rare autosomal recessive lysosomal storage disorder caused by deficiency of
lysosomal beta-mannosidase enzyme, leading to accumulation of mannose-containing
oligosaccharides in tissues and body fluids. Clinical manifestations include
intellectual disability, hearing loss, and variable neurological involvement.
category: Mendelian
disease_term:
preferred_term: beta-mannosidosis
term:
id: MONDO:0009562
label: beta-mannosidosis
parents:
- Lysosomal storage diseases
- Oligosaccharidoses
prevalence:
- population: Global reported literature
percentage: Unknown
notes: >-
Population prevalence has not been established. Beta-mannosidosis remains
an ultra-rare disorder described largely through case reports and small
series; reported case counts increased from 11 patients in the 1990s to 46
cases from 37 families in a 2025 review.
evidence:
- reference: PMID:9097826
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "Only 11 cases of beta mannosidase deficiency have been reported until now."
explanation: >-
This 1997 case report documents the extremely small number of reported
cases in the early literature, supporting the ultra-rare prevalence framing.
- reference: PMID:41235131
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "Including our 6 patients, a total of 46 cases from 37 different families have been reported."
explanation: >-
This contemporary review provides an updated literature-based case count,
supporting that prevalence remains unknown but exceptionally low.
pathophysiology:
- name: MANBA lysosomal beta-mannosidase deficiency
description: >
Biallelic MANBA pathogenic variants reduce lysosomal beta-mannosidase
activity, blocking the terminal step of lysosomal glycoprotein degradation.
genes:
- preferred_term: MANBA
term:
id: hgnc:6831
label: MANBA
molecular_functions:
- preferred_term: beta-mannosidase activity
modifier: DECREASED
term:
id: GO:0004567
label: beta-mannosidase activity
biological_processes:
- preferred_term: glycoprotein catabolic process
modifier: DECREASED
term:
id: GO:0006516
label: glycoprotein catabolic process
cellular_components:
- preferred_term: lysosomal lumen
term:
id: GO:0043202
label: lysosomal lumen
evidence:
- reference: PMID:41235131
reference_title: Expanding the Phenotype Spectrum of beta-Mannosidosis.
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "β-mannosidosis is an ultra-rare lysosomal storage disorder caused by a deficiency of β-mannosidase, which catalyzes the last step of glycoprotein degradation."
explanation: Directly supports the initiating enzyme deficiency and its place in glycoprotein degradation.
- reference: PMID:32847582
reference_title: "Variant c.2158-2A>G in MANBA is an important and frequent cause of hereditary hearing loss and beta-mannosidosis among the Czech and Slovak Roma population- evidence for a new ethnic-specific variant."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "Beta-mannosidosis is an extremely rare metabolic storage disorder resulting from a beta-mannosidase deficiency that is involved in the degradation of glycoproteins."
explanation: Supports beta-mannosidase deficiency as the primary metabolic lesion.
downstream:
- target: Beta-mannosidase activity
description: MANBA loss directly reduces diagnostic beta-mannosidase activity.
causal_link_type: DIRECT
evidence:
- reference: PMID:32847582
reference_title: "Variant c.2158-2A>G in MANBA is an important and frequent cause of hereditary hearing loss and beta-mannosidosis among the Czech and Slovak Roma population- evidence for a new ethnic-specific variant."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "a decreased activity of the beta-mannosidase enzyme in different cells, particularly in leukocytes"
explanation: Patient biochemical data support reduced beta-mannosidase activity.
- target: Glycoprotein-derived oligosaccharide storage
description: Reduced beta-mannosidase blocks lysosomal breakdown of glycoprotein-derived oligosaccharides.
causal_link_type: DIRECT
evidence:
- reference: PMID:41235131
reference_title: Expanding the Phenotype Spectrum of beta-Mannosidosis.
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "which catalyzes the last step of glycoprotein degradation"
explanation: Loss of the terminal glycoprotein-degradation enzyme directly supports storage of incompletely degraded substrates.
- name: Glycoprotein-derived oligosaccharide storage
description: >
Impaired lysosomal beta-mannosidase activity leaves glycoprotein-derived
oligosaccharides incompletely degraded, with abnormal oligosaccharides
detected in patient urine.
biological_processes:
- preferred_term: glycoprotein catabolic process
modifier: DECREASED
term:
id: GO:0006516
label: glycoprotein catabolic process
- preferred_term: oligosaccharide metabolic process
modifier: ABNORMAL
term:
id: GO:0009311
label: oligosaccharide metabolic process
cellular_components:
- preferred_term: lysosome
term:
id: GO:0005764
label: lysosome
evidence:
- reference: PMID:32847582
reference_title: "Variant c.2158-2A>G in MANBA is an important and frequent cause of hereditary hearing loss and beta-mannosidosis among the Czech and Slovak Roma population- evidence for a new ethnic-specific variant."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "Biochemical diagnostics confirmed the typical disaccharides (primarily Man (beta1 → 4) GlcNac) in the urine of affected patients"
explanation: Supports urinary accumulation of glycoprotein-derived oligosaccharides.
- reference: DOI:10.1093/clinchem/hvae043
reference_title: Ultra-Performance Liquid Chromatography-Tandem Mass Spectrometry Analysis of Urinary Oligosaccharides and Glycoamino Acids for the Diagnosis of Mucopolysaccharidosis and Glycoproteinosis
supports: PARTIAL
evidence_source: HUMAN_CLINICAL
snippet: "Oligosaccharides and glycoamino acids have been recognized as biomarkers for MPS and glycoproteinosis."
explanation: Supports urinary oligosaccharides as glycoproteinosis biomarkers generally, not beta-mannosidosis specifically.
downstream:
- target: Urinary free oligosaccharides
description: Stored oligosaccharide substrates overflow into urine as diagnostic biomarkers.
causal_link_type: DIRECT
evidence:
- reference: PMID:32847582
reference_title: "Variant c.2158-2A>G in MANBA is an important and frequent cause of hereditary hearing loss and beta-mannosidosis among the Czech and Slovak Roma population- evidence for a new ethnic-specific variant."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "Biochemical diagnostics confirmed the typical disaccharides (primarily Man (beta1 → 4) GlcNac) in the urine of affected patients"
explanation: Directly supports urinary oligosaccharides as a downstream biomarker.
- target: Auditory involvement
description: The storage disorder is repeatedly associated with hearing loss, though the exact cochlear intermediate is not resolved.
causal_link_type: INDIRECT_UNKNOWN_INTERMEDIATES
evidence:
- reference: PMID:41235131
reference_title: Expanding the Phenotype Spectrum of beta-Mannosidosis.
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "Hearing loss was the initial symptom most frequently reported"
explanation: Supports hearing loss as a major clinical consequence of the disorder.
- target: Neurodevelopmental and behavioral involvement
description: CNS involvement produces intellectual disability, behavioral disturbance, regression, and occasional seizures.
causal_link_type: INDIRECT_UNKNOWN_INTERMEDIATES
evidence:
- reference: PMID:41235131
reference_title: Expanding the Phenotype Spectrum of beta-Mannosidosis.
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "intellectual disability was the most frequent symptom overall."
explanation: Supports CNS clinical involvement as a common downstream manifestation.
- target: Abnormal brain myelination and neuroimaging
description: Patient series show delayed myelination, diffuse hypomyelination, and other MRI abnormalities.
causal_link_type: INDIRECT_UNKNOWN_INTERMEDIATES
evidence:
- reference: PMID:41235131
reference_title: Expanding the Phenotype Spectrum of beta-Mannosidosis.
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "Half the patients have abnormal brain MRIs, showing delayed myelination before 2 years of age and diffuse hypomyelination thereafter."
explanation: Supports brain myelination abnormalities as part of the beta-mannosidosis spectrum.
- target: Recurrent infection involvement
description: Recurrent skin and respiratory infections are reported in a subset of patients, but the specific immune mechanism is unresolved.
causal_link_type: INDIRECT_UNKNOWN_INTERMEDIATES
evidence:
- reference: PMID:32847582
reference_title: "Variant c.2158-2A>G in MANBA is an important and frequent cause of hereditary hearing loss and beta-mannosidosis among the Czech and Slovak Roma population- evidence for a new ethnic-specific variant."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "frequent infections of the skin and respiratory tract"
explanation: Supports recurrent infection involvement as a clinical manifestation associated with beta-mannosidosis.
- target: Cutaneous involvement
description: Cutaneous manifestations are reported in some patients, including rare angiokeratomas.
causal_link_type: INDIRECT_UNKNOWN_INTERMEDIATES
evidence:
- reference: PMID:32847582
reference_title: "Variant c.2158-2A>G in MANBA is an important and frequent cause of hereditary hearing loss and beta-mannosidosis among the Czech and Slovak Roma population- evidence for a new ethnic-specific variant."
supports: PARTIAL
evidence_source: HUMAN_CLINICAL
snippet: "Additional rare clinical signs such as angiokeratomas"
explanation: Supports rare cutaneous involvement but does not define the intermediate mechanism.
- name: Auditory involvement
description: >
Hearing loss is one of the most prominent and often earliest clinical
manifestations in reported beta-mannosidosis cohorts, including the
Central European Roma founder-variant series.
locations:
- preferred_term: cochlea
term:
id: UBERON:0001844
label: cochlea
evidence:
- reference: PMID:32847582
reference_title: "Variant c.2158-2A>G in MANBA is an important and frequent cause of hereditary hearing loss and beta-mannosidosis among the Czech and Slovak Roma population- evidence for a new ethnic-specific variant."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "The most prominent and common clinical manifestations are mental retardation reported in ten patients and hearing loss mentioned in 13 patients (Table 2)."
explanation: The Roma cohort establishes hearing loss as a prominent beta-mannosidosis manifestation.
- reference: PMID:41235131
reference_title: Expanding the Phenotype Spectrum of beta-Mannosidosis.
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "β-mannosidosis should be considered as a differential diagnosis in patients with syndromic or apparently nonsyndromic hearing loss"
explanation: Updated review supports hearing loss as a diagnostic clue.
downstream:
- target: Sensorineural hearing impairment
description: Auditory involvement clinically manifests as sensorineural hearing impairment.
causal_link_type: DIRECT
- name: Neurodevelopmental and behavioral involvement
description: >
Central nervous system involvement is variable but commonly includes
intellectual disability and behavioral abnormalities; seizures and
developmental regression are less frequent features in the expanded
phenotype spectrum.
cell_types:
- preferred_term: neuron
term:
id: CL:0000540
label: neuron
locations:
- preferred_term: brain
term:
id: UBERON:0000955
label: brain
evidence:
- reference: PMID:41235131
reference_title: Expanding the Phenotype Spectrum of beta-Mannosidosis.
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "Developmental regression, dysphagia, obsessive-compulsive-like behavior, and erythromelalgia are newly described features associated with β-mannosidosis among the 6 patients from our cohort."
explanation: Updated case series expands the neurodevelopmental and behavioral phenotype spectrum.
- reference: PMID:32847582
reference_title: "Variant c.2158-2A>G in MANBA is an important and frequent cause of hereditary hearing loss and beta-mannosidosis among the Czech and Slovak Roma population- evidence for a new ethnic-specific variant."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "The clinical manifestation varies between mild and severe, involving symptoms such as mental retardation, hyperactivity, behavioural problems, hearing loss, and frequent infections of the skin and respiratory tract."
explanation: Supports cognitive and behavioral manifestations.
downstream:
- target: Intellectual disability
description: CNS involvement is clinically expressed as intellectual disability.
causal_link_type: DIRECT
- target: Atypical behavior
description: Behavioral disturbance includes hyperactivity, obsessive-compulsive-like behavior, autistic features, and aggression in reported patients.
causal_link_type: DIRECT
- target: Developmental regression
description: Developmental regression is part of the newly expanded clinical spectrum.
causal_link_type: DIRECT
- target: Dysphagia
description: Dysphagia is part of the newly expanded neurologic and esophageal-motility phenotype spectrum.
causal_link_type: DIRECT
- target: Seizures
description: Seizures are an occasional neurologic manifestation in severe or early-onset cases.
causal_link_type: INDIRECT_UNKNOWN_INTERMEDIATES
- name: Abnormal brain myelination and neuroimaging
description: >
Brain MRI findings in beta-mannosidosis include delayed myelination,
diffuse hypomyelination, white matter hyperintensities, calcification,
atrophy, and hydrocephalus, indicating CNS structural involvement beyond
isolated cognitive symptoms.
cell_types:
- preferred_term: oligodendrocyte
term:
id: CL:0000128
label: oligodendrocyte
locations:
- preferred_term: brain
term:
id: UBERON:0000955
label: brain
biological_processes:
- preferred_term: myelination
modifier: DECREASED
term:
id: GO:0042552
label: myelination
evidence:
- reference: PMID:41235131
reference_title: Expanding the Phenotype Spectrum of beta-Mannosidosis.
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "Half the patients have abnormal brain MRIs, showing delayed myelination before 2 years of age and diffuse hypomyelination thereafter."
explanation: Directly supports delayed and reduced myelination in the reported cohort.
- reference: PMID:41235131
reference_title: Expanding the Phenotype Spectrum of beta-Mannosidosis.
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "Neuroimaging abnormalities were reported in 40% of published cases and included cortical and subcortical atrophy, basal ganglia and white matter calcification, hydrocephalus, periventricular and subcortical white matter hyperintensities, and delayed myelination."
explanation: Supports broader CNS imaging involvement across published cases.
downstream:
- target: Delayed myelination
description: MRI-defined myelination delay is the phenotype-level expression of this CNS imaging node.
causal_link_type: DIRECT
- name: Recurrent infection involvement
description: >
Recurrent skin and respiratory infections are reported in a subset of
beta-mannosidosis patients; one case report links recurrent respiratory
infections to aspiration-prone swallowing and esophageal motility
abnormalities, while the broader immune mechanism is not established in
the cached evidence.
evidence:
- reference: PMID:32847582
reference_title: "Variant c.2158-2A>G in MANBA is an important and frequent cause of hereditary hearing loss and beta-mannosidosis among the Czech and Slovak Roma population- evidence for a new ethnic-specific variant."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "frequent infections of the skin and respiratory tract"
explanation: Supports recurrent skin and respiratory infections as part of the clinical spectrum.
- reference: PMID:9097826
reference_title: "[Beta mannosidosis: a new case]."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "Our patient presented with abnormalities of swallowing and esophageal motility resulting in recurring respiratory infections, previously reported in some other cases."
explanation: Case report supports swallowing and esophageal motility abnormalities as one documented contributor to recurrent respiratory infections.
downstream:
- target: Recurrent respiratory infections
description: Respiratory infections are the recurrent-infection phenotype supported by the clinical reports.
causal_link_type: DIRECT
- name: Cutaneous involvement
description: >
Cutaneous involvement is reported in some beta-mannosidosis patients,
including rare angiokeratomas and recurrent skin infections. The current
cached evidence supports the clinical association but not a precise
skin-cell storage mechanism.
evidence:
- reference: PMID:32847582
reference_title: "Variant c.2158-2A>G in MANBA is an important and frequent cause of hereditary hearing loss and beta-mannosidosis among the Czech and Slovak Roma population- evidence for a new ethnic-specific variant."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "Additional rare clinical signs such as angiokeratomas"
explanation: Supports angiokeratoma as a rare cutaneous feature.
downstream:
- target: Angiokeratoma
description: Cutaneous involvement is reported in some patients, though angiokeratoma is a rare manifestation.
causal_link_type: DIRECT
evidence:
- reference: PMID:32847582
reference_title: "Variant c.2158-2A>G in MANBA is an important and frequent cause of hereditary hearing loss and beta-mannosidosis among the Czech and Slovak Roma population- evidence for a new ethnic-specific variant."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "Additional rare clinical signs such as angiokeratomas"
explanation: Supports angiokeratoma as a rare cutaneous manifestation.
phenotypes:
- name: Intellectual disability
description: Variable cognitive impairment reported across patients, degree correlates imperfectly with genotype or residual activity.
frequency: VERY_FREQUENT
phenotype_term:
preferred_term: Intellectual disability
term:
id: HP:0001249
label: Intellectual disability
evidence:
- reference: PMID:32847582
reference_title: "Variant c.2158-2A>G in MANBA is an important and frequent cause of hereditary hearing loss and beta-mannosidosis among the Czech and Slovak Roma population- evidence for a new ethnic-specific variant."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: >-
clinical manifestation includes deafness and mental retardation
explanation: >-
Mental retardation (intellectual disability) is explicitly listed as
a clinical manifestation of beta-mannosidosis.
- reference: PMID:41235131
reference_title: Expanding the Phenotype Spectrum of beta-Mannosidosis.
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "intellectual disability was the most frequent symptom overall."
explanation: Updated cohort and literature review supports intellectual disability as the most frequent symptom.
- name: Sensorineural hearing impairment
description: Early, often prelingual sensorineural hearing loss is a common and characteristic clinical feature.
frequency: VERY_FREQUENT
diagnostic: true
phenotype_term:
preferred_term: Sensorineural hearing impairment
term:
id: HP:0000407
label: Sensorineural hearing impairment
evidence:
- reference: PMID:32847582
reference_title: "Variant c.2158-2A>G in MANBA is an important and frequent cause of hereditary hearing loss and beta-mannosidosis among the Czech and Slovak Roma population- evidence for a new ethnic-specific variant."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "at least three out of five siblings suffer from early onset sensorineural hearing loss."
explanation: Supports sensorineural hearing loss as a reported hearing phenotype.
- reference: PMID:32847582
reference_title: "Variant c.2158-2A>G in MANBA is an important and frequent cause of hereditary hearing loss and beta-mannosidosis among the Czech and Slovak Roma population- evidence for a new ethnic-specific variant."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "hearing loss mentioned in 13 patients"
explanation: Supports hearing loss as a very common manifestation in the Roma founder-variant cohort.
- name: Atypical behavior
description: >
Behavioral manifestations include hyperactivity, obsessive-compulsive-like
behavior, autistic features, aggression, and other behavioral problems in
reported patients.
phenotype_term:
preferred_term: Atypical behavior
term:
id: HP:0000708
label: Atypical behavior
evidence:
- reference: PMID:32847582
reference_title: "Variant c.2158-2A>G in MANBA is an important and frequent cause of hereditary hearing loss and beta-mannosidosis among the Czech and Slovak Roma population- evidence for a new ethnic-specific variant."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "mental retardation, hyperactivity, behavioural problems, hearing loss"
explanation: The clinical review lists behavioral problems and hyperactivity in the beta-mannosidosis spectrum.
- reference: PMID:41235131
reference_title: Expanding the Phenotype Spectrum of beta-Mannosidosis.
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "obsessive-compulsive-like behavior"
explanation: Updated cohort identifies obsessive-compulsive-like behavior as a newly described feature.
- name: Developmental regression
description: Developmental regression was newly described in the expanded 2025 patient cohort.
phenotype_term:
preferred_term: Developmental regression
term:
id: HP:0002376
label: Developmental regression
evidence:
- reference: PMID:41235131
reference_title: Expanding the Phenotype Spectrum of beta-Mannosidosis.
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "Developmental regression, dysphagia, obsessive-compulsive-like behavior, and erythromelalgia are newly described features associated with β-mannosidosis among the 6 patients from our cohort."
explanation: The new cohort directly reports developmental regression.
- name: Dysphagia
description: >
Dysphagia and related swallowing or esophageal motility abnormalities are
reported in beta-mannosidosis, including a 2025 cohort and an earlier case
with recurrent respiratory infections.
phenotype_term:
preferred_term: Dysphagia
term:
id: HP:0002015
label: Dysphagia
evidence:
- reference: PMID:41235131
reference_title: Expanding the Phenotype Spectrum of beta-Mannosidosis.
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "Developmental regression, dysphagia, obsessive-compulsive-like behavior, and erythromelalgia are newly described features associated with β-mannosidosis among the 6 patients from our cohort."
explanation: The updated cohort explicitly identifies dysphagia as a newly described beta-mannosidosis feature.
- reference: PMID:9097826
reference_title: "[Beta mannosidosis: a new case]."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "Our patient presented with abnormalities of swallowing and esophageal motility resulting in recurring respiratory infections, previously reported in some other cases."
explanation: Earlier case report supports clinically significant swallowing and esophageal motility abnormalities.
- name: Delayed myelination
description: Brain MRI can show delayed myelination in infancy and diffuse hypomyelination later in childhood.
phenotype_term:
preferred_term: Delayed myelination
term:
id: HP:0012448
label: Delayed myelination
evidence:
- reference: PMID:41235131
reference_title: Expanding the Phenotype Spectrum of beta-Mannosidosis.
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "Half the patients have abnormal brain MRIs, showing delayed myelination before 2 years of age and diffuse hypomyelination thereafter."
explanation: Directly supports delayed myelination as a neuroimaging phenotype.
- name: Recurrent respiratory infections
description: Respiratory infections are reported in case reports and in the Roma founder-variant cohort.
phenotype_term:
preferred_term: Recurrent respiratory infections
term:
id: HP:0002205
label: Recurrent respiratory infections
evidence:
- reference: PMID:9097826
reference_title: "[Beta mannosidosis: a new case]."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "recurring respiratory infections, previously reported in some other cases."
explanation: Case report supports recurrent respiratory infections and notes prior reports.
- reference: PMID:32847582
reference_title: "Variant c.2158-2A>G in MANBA is an important and frequent cause of hereditary hearing loss and beta-mannosidosis among the Czech and Slovak Roma population- evidence for a new ethnic-specific variant."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "respiratory and skin infections reported in five patients"
explanation: Founder-variant cohort review supports respiratory and skin infections in a subset of patients.
- name: Seizures
description: Epileptic manifestations reported in some patients with CNS involvement.
frequency: OCCASIONAL
phenotype_term:
preferred_term: Seizure
term:
id: HP:0001250
label: Seizure
evidence:
- reference: PMID:32847582
reference_title: "Variant c.2158-2A>G in MANBA is an important and frequent cause of hereditary hearing loss and beta-mannosidosis among the Czech and Slovak Roma population- evidence for a new ethnic-specific variant."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "neonatal epilepsy"
explanation: The review lists neonatal epilepsy among rare severe clinical phenotypes.
- name: Angiokeratoma
description: Cutaneous vascular lesions reported in some cases, with skin cell vacuolation.
frequency: OCCASIONAL
phenotype_term:
preferred_term: Angiokeratoma
term:
id: HP:0001014
label: Angiokeratoma
evidence:
- reference: PMID:32847582
reference_title: "Variant c.2158-2A>G in MANBA is an important and frequent cause of hereditary hearing loss and beta-mannosidosis among the Czech and Slovak Roma population- evidence for a new ethnic-specific variant."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "Additional rare clinical signs such as angiokeratomas"
explanation: Supports angiokeratomas as rare manifestations in some patients.
genetic:
- name: MANBA gene mutations
association: Causative
relationship_type: CAUSATIVE
gene_term:
preferred_term: MANBA
term:
id: hgnc:6831
label: MANBA
variant_origin: GERMLINE
notes: >
Biallelic pathogenic variants in MANBA cause beta-mannosidosis. The c.2158-2A>G
variant is a prevalent founder allele among Czech/Slovak Roma with carrier
frequency of 3.77%, about 925 times higher than gnomAD frequency.
inheritance:
- name: Autosomal recessive
evidence:
- reference: PMID:32847582
reference_title: "Variant c.2158-2A>G in MANBA is an important and frequent cause of hereditary hearing loss and beta-mannosidosis among the Czech and Slovak Roma population- evidence for a new ethnic-specific variant."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: >-
carrier/heterozygote frequency of 3.77%. This is about 925 times higher
than the frequency of this variant in the gnomAD public database
explanation: >-
Identifies a founder variant with high carrier frequency in Roma populations,
demonstrating genetic basis of the disease.
- reference: PMID:41235131
reference_title: Expanding the Phenotype Spectrum of beta-Mannosidosis.
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "Across the cohort, 29 pathogenic MANBA variants were identified"
explanation: Updated cohort and literature review supports MANBA variant heterogeneity in beta-mannosidosis.
- reference: CGGV:assertion_d70d38aa-f7e9-4c93-8160-58dec9cec010-2022-08-02T160000.000Z
reference_title: "MANBA / beta-mannosidosis (Definitive)"
supports: SUPPORT
evidence_source: OTHER
snippet: "MANBA | HGNC:6831 | beta-mannosidosis | MONDO:0009562 | AR | Definitive"
explanation: ClinGen classifies the MANBA-beta-mannosidosis gene-disease relationship as definitive with autosomal recessive inheritance.
biochemical:
- name: Urinary free oligosaccharides
presence: INCREASED
context: Diagnostic biomarker
notes: >
Accumulated oligosaccharides including Man-GlcNAc disaccharide and sialylated
derivatives are detected in urine. Modern UPLC-MS/MS allows multiplexed detection
for glycoproteinoses.
readouts:
- target: Glycoprotein-derived oligosaccharide storage
relationship: READOUT_OF
direction: POSITIVE
endpoint_context: DIAGNOSTIC
interpretation: >
Increased urinary free oligosaccharides report overflow of incompletely
degraded glycoprotein-derived substrates from lysosomal storage.
evidence:
- reference: PMID:32847582
reference_title: "Variant c.2158-2A>G in MANBA is an important and frequent cause of hereditary hearing loss and beta-mannosidosis among the Czech and Slovak Roma population- evidence for a new ethnic-specific variant."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "Biochemical diagnostics confirmed the typical disaccharides (primarily Man (beta1 → 4) GlcNac) in the urine of affected patients"
explanation: Patient urine testing directly supports urinary oligosaccharides as a diagnostic readout of glycoprotein-derived oligosaccharide storage.
evidence:
- reference: PMID:32847582
reference_title: "Variant c.2158-2A>G in MANBA is an important and frequent cause of hereditary hearing loss and beta-mannosidosis among the Czech and Slovak Roma population- evidence for a new ethnic-specific variant."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "Biochemical diagnostics confirmed the typical disaccharides (primarily Man (beta1 → 4) GlcNac) in the urine of affected patients"
explanation: Supports urinary oligosaccharides as a diagnostic biochemical finding.
- reference: DOI:10.1093/clinchem/hvae043
reference_title: Ultra-Performance Liquid Chromatography-Tandem Mass Spectrometry Analysis of Urinary Oligosaccharides and Glycoamino Acids for the Diagnosis of Mucopolysaccharidosis and Glycoproteinosis
supports: PARTIAL
evidence_source: HUMAN_CLINICAL
snippet: "The assay is suitable for the accurate diagnosis and subtyping of MPS and glycoproteinosis"
explanation: Supports UPLC-MS/MS urinary oligosaccharide testing as a diagnostic approach for glycoproteinoses generally, not beta-mannosidosis specifically.
- name: Beta-mannosidase activity
presence: DECREASED
context: Diagnostic enzymatic assay
notes: >
Affected individuals exhibit enzyme activities ranging from undetectable up to
2-10% of normal controls. Carriers may show approximately 40% activity.
readouts:
- target: MANBA lysosomal beta-mannosidase deficiency
relationship: READOUT_OF
direction: NEGATIVE
endpoint_context: DIAGNOSTIC
interpretation: >
Decreased beta-mannosidase activity directly reports the primary MANBA
lysosomal enzyme deficiency.
evidence:
- reference: PMID:32847582
reference_title: "Variant c.2158-2A>G in MANBA is an important and frequent cause of hereditary hearing loss and beta-mannosidosis among the Czech and Slovak Roma population- evidence for a new ethnic-specific variant."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "a decreased activity of the beta-mannosidase enzyme in different cells, particularly in leukocytes"
explanation: Patient cell assays support reduced beta-mannosidase activity as a direct diagnostic readout of MANBA enzyme deficiency.
evidence:
- reference: PMID:32847582
reference_title: "Variant c.2158-2A>G in MANBA is an important and frequent cause of hereditary hearing loss and beta-mannosidosis among the Czech and Slovak Roma population- evidence for a new ethnic-specific variant."
supports: SUPPORT
evidence_source: HUMAN_CLINICAL
snippet: "a decreased activity of the beta-mannosidase enzyme in different cells, particularly in leukocytes"
explanation: Supports decreased beta-mannosidase activity in patient cells.
treatments:
- name: Supportive care
description: >
Symptom management including speech therapy, physical therapy, educational support,
and management of hearing impairment with hearing aids or cochlear implants.
treatment_term:
preferred_term: supportive care
term:
id: MAXO:0000950
label: supportive care
notes: >
Beta-mannosidosis is extremely rare, with a 2025 review reporting 46 cases
from 37 families. The disease shows marked clinical variability even among
individuals with similar genotypes. The c.2158-2A>G founder variant is
particularly important in Central European Roma populations.
classifications:
harrisons_chapter:
- classification_value: hereditary disease
datasets:
Disease Pathophysiology Research Report
Target Disease - Disease Name: Beta-mannosidosis - MONDO ID: MONDO_0009562 - Category: Mendelian
1) Core Pathophysiology: Key concepts and current understanding - Definition and cause: Beta-mannosidosis is an autosomal recessive lysosomal storage disorder caused by biallelic pathogenic variants in MANBA, encoding lysosomal beta-mannosidase, a soluble hydrolase responsible for terminal removal of beta-linked mannose residues from N-linked glycoprotein-derived oligosaccharides during lysosomal degradation (clinical enzymology and mutation evidence) (uchino2003morphologicalandbiochemical pages 2-4, uchino2003morphologicalandbiochemical pages 4-7, brozkova2020variantc.21582a>gin pages 6-8). - Primary pathophysiologic mechanism: Loss or marked reduction of beta-mannosidase activity impairs lysosomal catabolism of glycoprotein-derived oligosaccharides, leading to intra-lysosomal storage and cellular vacuolation. Electron microscopy and histology in patient tissues/cells (skin keratinocytes, fibroblasts) demonstrate prominent lysosomal enlargement/vacuolation consistent with storage pathology (uchino2003morphologicalandbiochemical pages 2-4, uchino2003morphologicalandbiochemical pages 4-7). As Uchino et al. reported, “prominent cytoplasmic vacuoles … were confirmed by electron microscopy to be lysosomes,” with “vacuolation increased during 1 week in culture” (Jul 2003; https://doi.org/10.1046/j.1365-2133.2003.05365.x) (uchino2003morphologicalandbiochemical pages 2-4, uchino2003morphologicalandbiochemical pages 4-7). - Substrates that accumulate: Free oligosaccharides are detected in urine, including Man-GlcNAc (m/z ~518 Da), sialylated species (Neu5Ac-Man-GlcNAc, ~879 Da), and higher oligosaccharides (e.g., pentasaccharide ~1328.6 Da), consistent with incomplete trimming of N-glycan-derived species (Aug 2020; https://doi.org/10.1186/s13023-020-01508-3) (brozkova2020variantc.21582a>gin pages 6-8). Modern UPLC-MS/MS approaches classify and quantify these urinary oligosaccharides for glycoproteinoses (including beta-mannosidosis), supporting their role as disease biomarkers and readouts of disrupted oligosaccharide metabolism (Apr 2024; https://doi.org/10.1093/clinchem/hvae043) (uchino2003morphologicalandbiochemical pages 7-7). - Subcellular processing steps affected: The defect lies within the lysosomal phase of glycoprotein degradation (endosome–lysosome network). Morphologic evidence of lysosomal storage/vacuolation in patient cells supports organellar dysfunction and lysosome organization changes (uchino2003morphologicalandbiochemical pages 2-4, uchino2003morphologicalandbiochemical pages 4-7). - Downstream cellular effects: Storage triggers lysosomal enlargement and likely perturbs lysosomal–autophagic flux and cellular homeostasis; clinical evidence and reviews suggest CNS involvement with variable neurodevelopmental impact, and reviews point to potential neuroinflammatory and myelin-related consequences in some cases, though direct mechanistic dissection remains limited in humans (Jan 2022; chapter review) (lukacs2022oligosaccharidosesandsialic pages 11-12).
2) Key Molecular Players and Affected Systems - Genes/Proteins (HGNC): MANBA (HGNC:6768) encodes lysosomal beta-mannosidase; truncating and splice-site variants can severely reduce or abolish activity. Uchino et al. identified aberrant splicing due to a G→A transition at intron 7 donor, causing a 4-nt insertion, frameshift at codon 321 and early termination at codon 325, with plasma activity ~2% of normal and fibroblast activity ~10% (Jul 2003; DOI above) (uchino2003morphologicalandbiochemical pages 2-4, uchino2003morphologicalandbiochemical pages 4-7). - Chemical entities/metabolites (CHEBI classes): Accumulated urinary free oligosaccharides include Man-β1→4-GlcNAc disaccharide and sialylated derivatives (Neu5Ac-containing oligosaccharides), consistent with impaired glycoprotein catabolism (Aug 2020; DOI above; Apr 2024; DOI above) (brozkova2020variantc.21582a>gin pages 6-8, uchino2003morphologicalandbiochemical pages 7-7). - Cell types (CL): Neurons and glia (especially oligodendrocytes) are implicated due to CNS phenotypes; microglia are hypothesized mediators of secondary neuroinflammation in lysosomal storage contexts. Keratinocytes and fibroblasts show clear lysosomal vacuolation in patient samples (uchino2003morphologicalandbiochemical pages 2-4, uchino2003morphologicalandbiochemical pages 4-7, lukacs2022oligosaccharidosesandsialic pages 11-12). - Anatomical locations (UBERON): Brain (cortex, white matter) and cochlea are primary organs relating to intellectual disability, leukoencephalopathy/demyelination in some cases, and sensorineural hearing loss. Skin (epidermis/dermis) shows vacuolated cells and cutaneous lesions in some reports (uchino2003morphologicalandbiochemical pages 2-4, uchino2003morphologicalandbiochemical pages 4-7, brozkova2020variantc.21582a>gin pages 6-8, lukacs2022oligosaccharidosesandsialic pages 11-12).
3) Dysregulated Biological Processes (candidate GO terms) - Lysosomal catabolic process; glycoprotein catabolic process; oligosaccharide metabolic process: impaired terminal trimming of β-linked mannose residues results in storage and elevated urinary free oligosaccharides (uchino2003morphologicalandbiochemical pages 4-7, brozkova2020variantc.21582a>gin pages 6-8, uchino2003morphologicalandbiochemical pages 7-7). - Lysosome organization/homeostasis: storage leads to lysosomal enlargement/vacuolation in multiple cell types (uchino2003morphologicalandbiochemical pages 2-4, uchino2003morphologicalandbiochemical pages 4-7). - Inflammatory response/neuroinflammation (proposed): reviews highlight that lysosomal storage can drive inflammatory pathways; for beta-mannosidosis, this remains a plausible but incompletely defined contributor to CNS manifestations (lukacs2022oligosaccharidosesandsialic pages 11-12).
4) Cellular Components (candidate GO terms) - Lysosome and lysosomal lumen: the site of beta-mannosidase action and storage accumulation (uchino2003morphologicalandbiochemical pages 2-4, uchino2003morphologicalandbiochemical pages 4-7, brozkova2020variantc.21582a>gin pages 6-8). - Endosome–lysosome system: trafficking and degradative compartments engaged in glycoprotein turnover (uchino2003morphologicalandbiochemical pages 2-4, uchino2003morphologicalandbiochemical pages 4-7).
5) Disease Progression: Sequence of events - Initial trigger: Biallelic loss-of-function or severe hypomorphic variants in MANBA reduce lysosomal beta-mannosidase activity (uchino2003morphologicalandbiochemical pages 2-4, uchino2003morphologicalandbiochemical pages 4-7). - Substrate accumulation: Incompletely degraded glycoprotein-derived oligosaccharides accumulate in lysosomes, with overflow into urine as free oligosaccharides (e.g., Man-GlcNAc, Neu5Ac-Man-GlcNAc, higher oligosaccharides) (brozkova2020variantc.21582a>gin pages 6-8, uchino2003morphologicalandbiochemical pages 7-7). - Cellular pathology: Lysosomal vacuolation/expansion is observed in multiple cell types, reflecting storage and organellar stress (uchino2003morphologicalandbiochemical pages 2-4, uchino2003morphologicalandbiochemical pages 4-7). - Tissue/organ involvement: CNS involvement (variable cognitive impairment, seizures; some reports of leukoencephalopathy), and inner ear involvement (sensorineural hearing loss); skin may show vacuolated cells and angiokeratomas in some cases (uchino2003morphologicalandbiochemical pages 2-4, uchino2003morphologicalandbiochemical pages 4-7, brozkova2020variantc.21582a>gin pages 6-8, lukacs2022oligosaccharidosesandsialic pages 11-12). - Clinical manifestation: Spectrum ranges from attenuated to more severe neurodevelopmental disease; expressivity is variable and not fully predicted by genotype or residual activity, per review evidence (lukacs2022oligosaccharidosesandsialic pages 11-12).
6) Phenotypic Manifestations and Mechanistic Links - Hearing loss: Early (often prelingual) sensorineural hearing impairment is a prominent feature in multiple cohorts, including a founder variant (c.2158-2A>G) in Roma patients; mechanistically, cochlear/neuronal storage and dysfunction are implicated, though detailed inner ear histopathology in humans remains limited (Aug 2020; DOI above) (brozkova2020variantc.21582a>gin pages 6-8). - Neurodevelopmental features: Intellectual disability and seizures occur variably; neuronal lysosomal storage and potential neuroinflammatory cascades may contribute (uchino2003morphologicalandbiochemical pages 4-7, lukacs2022oligosaccharidosesandsialic pages 11-12). - White matter involvement: Some cases show leukoencephalopathy/demyelination, implicating oligodendrocyte/axonal myelin pathology secondary to lysosomal dysfunction (review synthesis) (lukacs2022oligosaccharidosesandsialic pages 11-12). - Cutaneous findings: Angiokeratomas and epidermal cellular vacuolation have been described, consistent with storage in skin cells (uchino2003morphologicalandbiochemical pages 2-4, uchino2003morphologicalandbiochemical pages 4-7).
7) Genotype–Phenotype and Residual Enzyme Activity Correlations - Residual activity: Reported patient enzyme activities span “undetectable up to 0.02–10.0% of control,” with marked clinical variability; carriers may show ~40% activity without disease (Uchino data; Jul 2003; DOI above) (uchino2003morphologicalandbiochemical pages 4-7). As Uchino et al. noted, a truncated enzyme yielded “plasma β‑mannosidase activity … ~2% of normal” and fibroblast activity ~10% (uchino2003morphologicalandbiochemical pages 2-4). - Genotype variability and founder effects: The c.2158‑2A>G MANBA variant is a prevalent founder allele among Czech/Slovak Roma with beta-mannosidosis and hearing loss, with a carrier frequency of 3.77% in sampled Roma controls, illustrating population-specific risk (Aug 2020; DOI above) (brozkova2020variantc.21582a>gin pages 6-8). - Correlation limitations: Reviews emphasize variable expressivity and that residual activity does not perfectly predict severity; severe CNS involvement may occur even with apparent residual activity, underscoring complex modifiers (Jan 2022; chapter review) (lukacs2022oligosaccharidosesandsialic pages 11-12).
8) Diagnostics, Biomarkers, and Current Applications - Enzymatic assay: Diagnostic measurement of beta-mannosidase activity in leukocytes, fibroblasts, or plasma is reduced or absent in affected individuals (uchino2003morphologicalandbiochemical pages 4-7, brozkova2020variantc.21582a>gin pages 6-8). - Urinary free oligosaccharides (FOS): Distinctive patterns of Man-GlcNAc and related oligosaccharides can be detected; UPLC‑MS/MS assays now allow multiplexed detection and disease subtyping across glycoproteinoses, achieving high sensitivity/specificity in validation cohorts and showing substantial reductions of disease-specific biomarkers in treated patients (class-wide observation across LSDs, with inclusion of glycoproteinoses) (Apr 2024; https://doi.org/10.1093/clinchem/hvae043) (uchino2003morphologicalandbiochemical pages 7-7).
9) Therapeutic Implications and Developments - Monitoring: Given robust urinary oligosaccharide signatures, modern UPLC‑MS/MS provides a platform for diagnostic confirmation and potential treatment monitoring in glycoproteinoses; reductions in biomarkers after therapy have been documented in validation sets (LSDs including glycoproteinoses) (Apr 2024; DOI above) (uchino2003morphologicalandbiochemical pages 7-7). - Disease-modifying approaches: While enzyme replacement therapy and gene therapy are established in other LSDs, specific clinical efficacy data for beta-mannosidosis remain sparse in the accessible evidence here; reviews highlight the principle that lysosomal correction may ameliorate storage and downstream inflammation, but patient-level interventional outcomes for MANBA deficiency require further study (lukacs2022oligosaccharidosesandsialic pages 11-12).
10) Expert Opinions and Analysis - Clinical heterogeneity: Expert reviews emphasize that beta-mannosidosis exhibits broad phenotypic variability—even among null or severely disruptive genotypes—complicating prediction of course and underscoring the need for biochemical confirmation and longitudinal assessment (Jan 2022; chapter review) (lukacs2022oligosaccharidosesandsialic pages 11-12). - Diagnostic strategy: Combining enzyme activity assays with next-generation sequencing and urinary oligosaccharide profiling can reduce diagnostic delay and enable cascade testing in families (brozkova2020variantc.21582a>gin pages 6-8, uchino2003morphologicalandbiochemical pages 7-7).
11) Relevant Statistics and Data - Residual enzyme activities: Affected individuals can exhibit activities “undetectable up to 0.02–10.0% of control,” whereas an asymptomatic heterozygous mother showed ~40% activity (Jul 2003; DOI above) (uchino2003morphologicalandbiochemical pages 4-7). - Population genetics: c.2158‑2A>G MANBA carrier frequency 3.77% in Roma controls (n=345), about 925-fold higher than gnomAD frequency; founder effect with multiple affected families (Aug 2020; DOI above) (brozkova2020variantc.21582a>gin pages 6-8). - Biomarker performance: A 2024 UPLC‑MS/MS platform achieved unambiguous diagnosis across multiple LSD subtypes with 100% sensitivity/specificity in a validation set, and showed substantial biomarker reduction in treated patients (platform covers glycoproteinoses, supporting applicability to beta-mannosidosis) (Apr 2024; DOI above) (uchino2003morphologicalandbiochemical pages 7-7).
Ontology-Aligned Annotations and Evidence Table | Category | Term/ID | Ontology | Description | Evidence | URL/DOI | |---|---|---|---|---|---| | Gene | MANBA (HGNC:6768) | HGNC | Encodes lysosomal beta-mannosidase; causal gene for autosomal-recessive beta-mannosidosis | (uchino2003morphologicalandbiochemical pages 2-4, uchino2003morphologicalandbiochemical pages 4-7, brozkova2020variantc.21582a>gin pages 6-8, lukacs2022oligosaccharidosesandsialic pages 11-12) | Uchino 2003 DOI: 10.1046/j.1365-2133.2003.05365.x; Brozkova 2020 DOI: 10.1186/s13023-020-01508-3 | | Biological process | Lysosomal catabolic process (GO:0009056) | GO | Degradation of macromolecules in lysosomes; impaired in MANBA deficiency leading to substrate accumulation | (uchino2003morphologicalandbiochemical pages 4-7, brozkova2020variantc.21582a>gin pages 6-8, lukacs2022oligosaccharidosesandsialic pages 11-12) | Uchino 2003 DOI: 10.1046/j.1365-2133.2003.05365.x | | Biological process | Glycoprotein catabolic process (GO:0006515) | GO | Defective trimming of N- and O-linked oligosaccharides from glycoproteins due to loss of beta-mannosidase activity | (uchino2003morphologicalandbiochemical pages 4-7, brozkova2020variantc.21582a>gin pages 6-8) | Brozkova 2020 DOI: 10.1186/s13023-020-01508-3 | | Biological process | Oligosaccharide metabolic process (GO:0009311) | GO | Accumulation and altered metabolism of free oligosaccharides derived from incomplete glycoprotein degradation | (uchino2003morphologicalandbiochemical pages 4-7, brozkova2020variantc.21582a>gin pages 6-8, uchino2003morphologicalandbiochemical pages 7-7) | Wongkittichote 2024 DOI: 10.1093/clinchem/hvae043 | | Biological process | Lysosome organization (GO:0007040) | GO | Lysosomal enlargement/vacuolation observed in patient cells due to storage material | (uchino2003morphologicalandbiochemical pages 2-4, uchino2003morphologicalandbiochemical pages 4-7) | Uchino 2003 DOI: 10.1046/j.1365-2133.2003.05365.x | | Biological process | Inflammatory response (GO:0006954) | GO | Proposed downstream response (neuroinflammation) in some patients / models; mechanistic links under investigation | (lukacs2022oligosaccharidosesandsialic pages 11-12) | Lukacs & Beck 2022 DOI: 10.1007/978-3-642-40337-8_26 | | Cellular component | Lysosome (GO:0005764) | GO | Primary organelle of substrate accumulation and beta-mannosidase localization | (uchino2003morphologicalandbiochemical pages 2-4, uchino2003morphologicalandbiochemical pages 4-7) | Uchino 2003 DOI: 10.1046/j.1365-2133.2003.05365.x | | Cellular component | Lysosomal lumen (GO:0043202) | GO | Enzymatic activity site for soluble hydrolases including beta-mannosidase | (uchino2003morphologicalandbiochemical pages 4-7, brozkova2020variantc.21582a>gin pages 6-8) | Brozkova 2020 DOI: 10.1186/s13023-020-01508-3 | | Cellular component | Endosome-lysosome system | — | Endocytic/lysosomal compartments involved in glycoprotein processing and accumulation | (uchino2003morphologicalandbiochemical pages 2-4, uchino2003morphologicalandbiochemical pages 4-7) | Uchino 2003 DOI: 10.1046/j.1365-2133.2003.05365.x | | Phenotype | Sensorineural hearing impairment (HP:0000407) | HP | Early, often prelingual hearing loss is a common and characteristic clinical feature | (brozkova2020variantc.21582a>gin pages 6-8) | Brozkova 2020 DOI: 10.1186/s13023-020-01508-3 | | Phenotype | Intellectual disability (HP:0001249) | HP | Variable cognitive impairment reported across patients; degree correlates imperfectly with genotype/residual activity | (uchino2003morphologicalandbiochemical pages 4-7, brozkova2020variantc.21582a>gin pages 6-8, lukacs2022oligosaccharidosesandsialic pages 11-12) | Uchino 2003 DOI: 10.1046/j.1365-2133.2003.05365.x | | Phenotype | Seizures (HP:0001250) | HP | Epileptic manifestations reported in some patients with CNS involvement | (uchino2003morphologicalandbiochemical pages 4-7) | Uchino 2003 DOI: 10.1046/j.1365-2133.2003.05365.x | | Phenotype | Peripheral neuropathy (HP:0009830) | HP | Peripheral nerve involvement and neuropathic features documented in cases | (uchino2003morphologicalandbiochemical pages 4-7) | Uchino 2003 DOI: 10.1046/j.1365-2133.2003.05365.x | | Phenotype | Angiokeratoma (HP:0000982) | HP | Cutaneous vascular lesions reported in some beta-mannosidosis cases | (uchino2003morphologicalandbiochemical pages 4-7, uchino2003morphologicalandbiochemical pages 7-7) | Uchino 2003 DOI: 10.1046/j.1365-2133.2003.05365.x | | Cell type | Neuron (CL:0000540) | CL | Neuronal storage and dysfunction underlie cognitive, seizure, and neurodegenerative features | (uchino2003morphologicalandbiochemical pages 4-7, lukacs2022oligosaccharidosesandsialic pages 11-12) | Uchino 2003 DOI: 10.1046/j.1365-2133.2003.05365.x | | Cell type | Oligodendrocyte (CL:0000128) | CL | Implicated in reported leukoencephalopathy/demyelination phenotypes in some patients/models | (lukacs2022oligosaccharidosesandsialic pages 11-12) | Lukacs & Beck 2022 DOI: 10.1007/978-3-642-40337-8_26 | | Cell type | Microglial cell (CL:0000129) | CL | Candidate mediator of neuroinflammation secondary to lysosomal storage (mechanistic studies limited) | (lukacs2022oligosaccharidosesandsialic pages 11-12) | Lukacs & Beck 2022 DOI: 10.1007/978-3-642-40337-8_26 | | Cell type | Keratinocyte (CL:0000312) | CL | Skin cell vacuolation described histologically in patient biopsies | (uchino2003morphologicalandbiochemical pages 2-4, uchino2003morphologicalandbiochemical pages 4-7) | Uchino 2003 DOI: 10.1046/j.1365-2133.2003.05365.x | | Cell type | Fibroblast (CL:0000057) | CL | Patient fibroblasts show lysosomal vacuolation in culture; used for biochemical assays | (uchino2003morphologicalandbiochemical pages 2-4, uchino2003morphologicalandbiochemical pages 4-7) | Uchino 2003 DOI: 10.1046/j.1365-2133.2003.05365.x | | Anatomical site | Brain (UBERON:0000955) | UBERON | Central organ affected; cognitive and seizure phenotypes originate here | (uchino2003morphologicalandbiochemical pages 4-7, lukacs2022oligosaccharidosesandsialic pages 11-12) | Uchino 2003 DOI: 10.1046/j.1365-2133.2003.05365.x | | Anatomical site | White matter (UBERON:0002436) | UBERON | Reported leukoencephalopathy/demyelination implicates white-matter pathology | (lukacs2022oligosaccharidosesandsialic pages 11-12) | Lukacs & Beck 2022 DOI: 10.1007/978-3-642-40337-8_26 | | Anatomical site | Cochlea (UBERON:0001844) | UBERON | Site relevant to sensorineural hearing loss observed in patients | (brozkova2020variantc.21582a>gin pages 6-8) | Brozkova 2020 DOI: 10.1186/s13023-020-01508-3 | | Anatomical site | Skin (UBERON:0002097) | UBERON | Cutaneous manifestations (vacuolation, angiokeratoma) documented | (uchino2003morphologicalandbiochemical pages 2-4, uchino2003morphologicalandbiochemical pages 7-7) | Uchino 2003 DOI: 10.1046/j.1365-2133.2003.05365.x | | Chemical entity | Man-β1-4GlcNAc disaccharide (CHEBI:?) | CHEBI (pending) | Free disaccharide/oligosaccharide species identified in glycoproteinoses; reported as bioactive in other contexts and detected in patients' urine | (uchino2003morphologicalandbiochemical pages 4-7, brozkova2020variantc.21582a>gin pages 6-8, uchino2003morphologicalandbiochemical pages 7-7) | Brozkova 2020 DOI: 10.1186/s13023-020-01508-3; Uchino 2003 DOI: 10.1046/j.1365-2133.2003.05365.x | | Chemical entity | Neu5Ac-containing oligosaccharides (Neu5Ac-) | CHEBI (Neu5Ac) | Sialylated oligosaccharide species reported among urinary peaks in some patients | (brozkova2020variantc.21582a>gin pages 6-8) | Brozkova 2020 DOI: 10.1186/s13023-020-01508-3 | | Chemical entity | Free urinary oligosaccharides | — | Biomarker class: accumulated oligosaccharides (e.g., Man-GlcNAc, Neu5Ac-Man-GlcNAc) detected by urinary profiling | (uchino2003morphologicalandbiochemical pages 4-7, brozkova2020variantc.21582a>gin pages 6-8, uchino2003morphologicalandbiochemical pages 7-7) | Wongkittichote 2024 DOI: 10.1093/clinchem/hvae043; Brozkova 2020 DOI: 10.1186/s13023-020-01508-3 | | Biomarker / assay | Urinary free oligosaccharides by UPLC-MS/MS | Assay | Sensitive multiplexed detection and subtyping of glycoproteinoses including beta-mannosidosis; useful for diagnosis and monitoring | (uchino2003morphologicalandbiochemical pages 7-7, uchino2003morphologicalandbiochemical pages 4-7, brozkova2020variantc.21582a>gin pages 6-8) | Wongkittichote 2024 DOI: 10.1093/clinchem/hvae043 | | Biomarker / assay | Enzyme activity assay in leukocytes (β-mannosidase) | Assay | Diagnostic enzymatic assay: leukocyte/plasma activity is reduced or absent in affected individuals | (uchino2003morphologicalandbiochemical pages 4-7, brozkova2020variantc.21582a>gin pages 6-8) | Brozkova 2020 DOI: 10.1186/s13023-020-01508-3 |
Table: Compact ontology-aligned annotation table summarizing genes, processes, components, phenotypes, cell types, tissues, chemical entities, and diagnostic biomarkers for beta-mannosidosis with evidence mappings to the gathered sources (pqac IDs) and key DOIs.
Evidence Items (key citations with URLs and dates) - Uchino Y, et al. Morphological and biochemical studies of human β‑mannosidosis: identification of a novel β‑mannosidase gene mutation. British Journal of Dermatology. Jul 2003. DOI: 10.1046/j.1365-2133.2003.05365.x. URL: https://doi.org/10.1046/j.1365-2133.2003.05365.x (pathogenic variant; residual enzyme activity; lysosomal vacuolation) (uchino2003morphologicalandbiochemical pages 2-4, uchino2003morphologicalandbiochemical pages 4-7, uchino2003morphologicalandbiochemical pages 7-7). - Brozkova DS, et al. Variant c.2158‑2A>G in MANBA is an important and frequent cause of hereditary hearing loss and beta-mannosidosis among the Czech and Slovak Roma population. Orphanet J Rare Dis. Aug 2020. DOI: 10.1186/s13023-020-01508-3. URL: https://doi.org/10.1186/s13023-020-01508-3 (urinary oligosaccharide species; undetectable enzyme activity; founder variant; hearing loss) (brozkova2020variantc.21582a>gin pages 6-8). - Lukacs Z, Beck M. Oligosaccharidoses and sialic acid disorders. In: Physician’s Guide… Chapter. Jan 2022. DOI: 10.1007/978-3-642-40337-8_26. URL: https://doi.org/10.1007/978-3-642-40337-8_26 (clinical heterogeneity; genotype–phenotype considerations; possible white-matter involvement; conceptual therapeutic landscape) (lukacs2022oligosaccharidosesandsialic pages 11-12). - Wongkittichote P, et al. UPLC‑MS/MS Analysis of Urinary Oligosaccharides and Glycoamino Acids for the Diagnosis of MPS and Glycoproteinosis. Clinical Chemistry. Apr 2024. DOI: 10.1093/clinchem/hvae043. URL: https://doi.org/10.1093/clinchem/hvae043 (modern diagnostics; sensitivity/specificity; biomarker reduction after treatment, class-wide) (uchino2003morphologicalandbiochemical pages 7-7).
Notes on Scope and Gaps - While mechanistic plausibility supports roles for microglial activation and demyelination in some patients, direct human mechanistic studies in beta-mannosidosis are limited in the accessible literature. The above synthesis highlights what is established versus proposed and indicates where additional research (e.g., patient-derived neural models, advanced neuroimaging–biomarker correlations) is needed (lukacs2022oligosaccharidosesandsialic pages 11-12).
References
(uchino2003morphologicalandbiochemical pages 2-4): Y. Uchino, T. Fukushige, S. Yotsumoto, T. Hashiguchi, H. Taguchi, N. Suzuki, I. Konohana, and T. Kanzaki. Morphological and biochemical studies of human β‐mannosidosis: identification of a novel β‐mannosidase gene mutation. British Journal of Dermatology, 149:23-29, Jul 2003. URL: https://doi.org/10.1046/j.1365-2133.2003.05365.x, doi:10.1046/j.1365-2133.2003.05365.x. This article has 28 citations and is from a highest quality peer-reviewed journal.
(uchino2003morphologicalandbiochemical pages 4-7): Y. Uchino, T. Fukushige, S. Yotsumoto, T. Hashiguchi, H. Taguchi, N. Suzuki, I. Konohana, and T. Kanzaki. Morphological and biochemical studies of human β‐mannosidosis: identification of a novel β‐mannosidase gene mutation. British Journal of Dermatology, 149:23-29, Jul 2003. URL: https://doi.org/10.1046/j.1365-2133.2003.05365.x, doi:10.1046/j.1365-2133.2003.05365.x. This article has 28 citations and is from a highest quality peer-reviewed journal.
(brozkova2020variantc.21582a>gin pages 6-8): Dana Safka Brozkova, Lukas Varga, Anna Uhrova Meszarosova, Zuzana Slobodova, Martina Skopkova, Andrea Soltysova, Andrej Ficek, Jan Jencik, Jana Lastuvkova, Daniela Gasperikova, and Pavel Seeman. Variant c.2158-2a>g in manba is an important and frequent cause of hereditary hearing loss and beta-mannosidosis among the czech and slovak roma population- evidence for a new ethnic-specific variant. Orphanet Journal of Rare Diseases, Aug 2020. URL: https://doi.org/10.1186/s13023-020-01508-3, doi:10.1186/s13023-020-01508-3. This article has 12 citations and is from a peer-reviewed journal.
(lukacs2022oligosaccharidosesandsialic pages 11-12): Zoltan Lukacs and Michael Beck. Oligosaccharidoses and sialic acid disorders. Physician's Guide to the Diagnosis, Treatment, and Follow-Up of Inherited Metabolic Diseases, pages 437-448, Jan 2022. URL: https://doi.org/10.1007/978-3-642-40337-8_26, doi:10.1007/978-3-642-40337-8_26. This article has 0 citations.
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