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0
Mappings
0
Definitions
0
Inheritance
6
Pathophysiology
1
Histopathology
2
Phenotypes
6
Pathograph
4
Genes
4
Treatments
3
Subtypes
0
Differentials
0
Datasets
0
Trials
0
Models
85
References
2
Deep Research
๐Ÿท

Classifications

Harrison's Chapter
cancer solid tumor
ICD-O Morphology
Melanoma
โ—†

Subtypes

3
V600E Melanoma
The dominant BRAF V600 melanoma subtype, usually caused by the p.Val600Glu substitution and accounting for most BRAF V600-mutant cutaneous melanomas.
V600K Melanoma
The second most common BRAF V600 melanoma subtype. It is relatively enriched in older patients and chronically sun-exposed tumors compared with V600E.
Other V600 Melanoma
Less common activating BRAF V600 substitutions, including V600R and V600M, that preserve the same MAPK-activating therapeutic logic.
โš™

Pathophysiology

6
BRAF V600 Oncogenic Mutation
BRAF V600 mutations, predominantly V600E and V600K, result in substitution of the valine residue in the activation loop of the BRAF kinase. This removes an autoinhibitory mechanism, causing constitutive kinase activity independent of upstream RAS signaling. The mutant BRAF signals as a monomer, unlike wild-type BRAF which requires dimerization for activation.
melanocyte link
MAPK cascade link โ†‘ INCREASED
Show evidence (1 reference)
PMID:40023845 PARTIAL
"Hotspot BRAF, hotspot NRAS, and NF1 loss-of-function mutations are found in approximately 50%, 25%, and 15% of cutaneous melanomas, respectively."
This abstract reports frequent hotspot BRAF mutations in cutaneous melanoma, supporting the relevance of BRAF-driven melanoma.
Constitutive MAPK Pathway Activation
Mutant BRAF continuously phosphorylates and activates MEK1/2, which in turn activates ERK1/2. This constitutive MAPK signaling drives expression of genes promoting cell cycle progression, survival, and proliferation. The pathway operates independently of growth factor stimulation.
signal transduction link โ†‘ INCREASED cell population proliferation link โ†‘ INCREASED
Uncontrolled Melanocyte Proliferation
Constitutive MAPK signaling drives melanocyte proliferation through ERK-mediated phosphorylation and stabilization of transcription factors controlling cell cycle progression, including upregulation of cyclin D1 and suppression of cell cycle inhibitors such as p27.
melanocyte link
cell population proliferation link โ†‘ INCREASED
skin of body link
Apoptosis Resistance
BRAF V600 signaling promotes melanoma cell survival through multiple anti-apoptotic mechanisms, including upregulation of BCL2 family members and suppression of pro-apoptotic BIM. This contributes to tumor persistence and therapy resistance.
apoptotic process link โ†“ DECREASED
Acquired MAPK Reactivation and Bypass Resistance
Most advanced BRAF V600-mutant melanomas initially respond to combined BRAF/MEK inhibition, but acquired resistance commonly develops through renewed MAPK signaling or parallel survival pathways. Reported mechanisms include secondary NRAS mutations, MEK/MAP2K1 mutations, BRAF amplification or splice variants, PI3K-AKT activation, and metabolic adaptation toward oxidative phosphorylation.
MAPK cascade link โ†‘ INCREASED response to xenobiotic stimulus link โš  ABNORMAL
Immune Evasion via PD-L1 Upregulation
BRAF V600-mutant melanoma is among the most immunogenic solid tumors due to high UV-induced tumor mutational burden generating abundant neoantigens. Tumor-infiltrating CD8+ T cells mount anti-tumor responses, but melanoma cells adaptively upregulate PD-L1 in response to interferon-gamma, suppressing T cell cytotoxicity. BRAF-MAPK signaling itself also contributes to immune evasion through intrinsic PD-L1 upregulation via MEK/ERK-dependent mechanisms.
CD8-positive, alpha-beta T cell link
Negative Regulation of T Cell Mediated Immunity link โ†‘ INCREASED
Show evidence (1 reference)
PMID:33256089 SUPPORT Other
"Cancer cells including melanoma cells, upregulate PD-L1 expression on the cell surface. T-lymphocytes with surface expression of PD-1, interacts with PD-L1 on the tumor, leading to T-cell exhaustion, thereby, causing dysfunction of the immune system in detecting and eliminating the tumor cells"
Review directly describes melanoma cells upregulating PD-L1 to engage PD-1 on T lymphocytes, leading to T cell exhaustion and immune evasion - supporting the adaptive immune resistance mechanism in BRAF-mutant melanoma.
โœถ

Histopathology

1
Melanocytic Neoplasm VERY_FREQUENT
Malignant melanoma represents a neoplasm stemming from melanocytes.
Show evidence (1 reference)
PMID:27268913 SUPPORT
"Malignant melanoma represents a neoplasm stemming from melanocytes"
Abstract defines melanoma as a neoplasm stemming from melanocytes.
โฌก

Pathograph

Use the checkboxes to hide or show graph categories. Hover nodes for evidence and cross-linked metadata.
Pathograph: causal mechanism network for BRAF V600 Mutant Melanoma Interactive directed graph showing how pathophysiology mechanisms, phenotypes, genetic factors and variants, experimental models, environmental triggers, and treatments relate through causal and linked edges.
โ—

Phenotypes

2
Cutaneous Melanoma OBLIGATE Dermatologic HP:0012056
Pigmented Skin Lesion VERY_FREQUENT Dermatologic HP:0008069
๐Ÿงฌ

Genetic Associations

4
BRAF V600E (Somatic Oncogenic Mutation)
BRAF V600K (Somatic Oncogenic Mutation)
BRAF V600R (Somatic Oncogenic Mutation)
BRAF V600M (Somatic Oncogenic Mutation)
๐Ÿ’Š

Treatments

4
Dabrafenib plus Trametinib
Action: targeted therapy Ontology label: Targeted Therapy NCIT:C93352
Agent: dabrafenib โ†— trametinib โ†—
First-line targeted therapy combining BRAF inhibitor dabrafenib with MEK inhibitor trametinib. Combination therapy achieves higher response rates (approximately 70%) and longer duration of response compared to BRAF inhibitor monotherapy, while reducing paradoxical MAPK activation and cutaneous squamous cell carcinomas.
Vemurafenib plus Cobimetinib
Action: targeted therapy Ontology label: Targeted Therapy NCIT:C93352
Agent: vemurafenib โ†— cobimetinib โ†—
Alternative BRAF plus MEK inhibitor combination. Vemurafenib was the first BRAF inhibitor approved for melanoma. Combined with the MEK inhibitor cobimetinib to improve efficacy and reduce paradoxical activation side effects.
๐Ÿ”ฌ 3D Structures:
3OG7 X-ray 2.45 ร… โš—๏ธ vemurafenib
BRAF V600E kinase domain in complex with vemurafenib (PLX4032), showing selective binding to the mutant active conformation that drives melanoma
Encorafenib plus Binimetinib
Action: targeted therapy Ontology label: Targeted Therapy NCIT:C93352
Agent: encorafenib โ†— binimetinib โ†—
Third-generation BRAF plus MEK inhibitor combination offering improved tolerability profile. Encorafenib has a longer half-life than other BRAF inhibitors, potentially reducing dosing frequency.
Immune Checkpoint Inhibitors
Action: immunotherapy Ontology label: Immunotherapy NCIT:C15262
Agent: pembrolizumab โ†— nivolumab โ†— ipilimumab โ†—
Anti-PD-1 antibodies (pembrolizumab, nivolumab) alone or combined with anti-CTLA-4 (ipilimumab) are also effective in BRAF-mutant melanoma. The optimal sequencing of targeted therapy versus immunotherapy remains an active area of investigation.
Mechanism Target:
INHIBITS Immune Evasion via PD-L1 Upregulation — Anti-PD-1/anti-CTLA-4 antibodies block checkpoint-mediated immune evasion, restoring the anti-tumor T cell response against neoantigen-rich melanoma cells. Melanoma's high mutational burden from UV exposure provides abundant neoantigens, making it among the most responsive tumor types to checkpoint blockade.
Show evidence (1 reference)
PMID:33256089 SUPPORT Other
"FDA approved the combination therapy of anti-CTLA-4 (ipilimumab) with anti-PD-1 (nivolumab), for the treatment of unresectable or metastatic melanoma, and resulted in improved response rates by 50%โ€“60%, with enhanced durable survival compared to either agent alone"
Review reports FDA-approved combination of ipilimumab (anti-CTLA-4) and nivolumab (anti-PD-1) in melanoma with 50-60% response rates and durable survival, directly supporting checkpoint inhibitor efficacy against melanoma immune evasion.
{ }

Source YAML

click to show
name: BRAF V600 Mutant Melanoma
creation_date: '2026-01-26T02:55:13Z'
updated_date: '2026-05-06T05:33:39Z'
description: >-
  BRAF V600-mutant melanoma is a molecular subtype of cutaneous melanoma characterized
  by activating mutations in the BRAF oncogene, most commonly V600E (substitution
  of
  valine for glutamic acid at codon 600), with V600K being the second most common
  variant.
  These mutations result in constitutive activation of the BRAF kinase and downstream
  MAPK/ERK signaling pathway, driving uncontrolled melanocyte proliferation. BRAF
  V600
  mutations occur in approximately 40-50% of cutaneous melanomas and are associated
  with
  intermittent sun exposure, younger patient age, and superficial spreading histology.
  This molecular subtype is paradigmatic for oncogene-targeted therapy, as the combination
  of BRAF and MEK inhibitors (dabrafenib plus trametinib) has transformed outcomes
  for
  patients with advanced disease.
categories:
- Skin Cancer
- Molecularly Defined Cancer
- Oncogene-Driven Cancer
parents:
- cutaneous melanoma
has_subtypes:
- name: V600E Melanoma
  description: >-
    The dominant BRAF V600 melanoma subtype, usually caused by the p.Val600Glu
    substitution and accounting for most BRAF V600-mutant cutaneous melanomas.
- name: V600K Melanoma
  description: >-
    The second most common BRAF V600 melanoma subtype. It is relatively enriched
    in older patients and chronically sun-exposed tumors compared with V600E.
- name: Other V600 Melanoma
  description: >-
    Less common activating BRAF V600 substitutions, including V600R and V600M,
    that preserve the same MAPK-activating therapeutic logic.
pathophysiology:
- name: BRAF V600 Oncogenic Mutation
  description: >-
    BRAF V600 mutations, predominantly V600E and V600K, result in substitution of
    the
    valine residue in the activation loop of the BRAF kinase. This removes an autoinhibitory
    mechanism, causing constitutive kinase activity independent of upstream RAS signaling.
    The mutant BRAF signals as a monomer, unlike wild-type BRAF which requires dimerization
    for activation.
  evidence:
  - reference: PMID:40023845
    reference_title: "The NF1 tumor suppressor regulates PD-L1 and immune evasion in melanoma."
    supports: PARTIAL
    snippet: Hotspot BRAF, hotspot NRAS, and NF1 loss-of-function mutations are found in approximately 50%, 25%, and 15% of cutaneous melanomas, respectively.
    explanation: This abstract reports frequent hotspot BRAF mutations in cutaneous melanoma, supporting the relevance of BRAF-driven melanoma.
  cell_types:
  - preferred_term: melanocyte
    term:
      id: CL:0000148
      label: melanocyte
  biological_processes:
  - preferred_term: MAPK cascade
    modifier: INCREASED
    term:
      id: GO:0000165
      label: MAPK cascade
  downstream:
  - target: Constitutive MAPK Pathway Activation
    description: V600E BRAF has 500-fold increased kinase activity compared to wild-type
- name: Constitutive MAPK Pathway Activation
  description: >-
    Mutant BRAF continuously phosphorylates and activates MEK1/2, which in turn activates
    ERK1/2. This constitutive MAPK signaling drives expression of genes promoting
    cell
    cycle progression, survival, and proliferation. The pathway operates independently
    of growth factor stimulation.
  biological_processes:
  - preferred_term: signal transduction
    modifier: INCREASED
    term:
      id: GO:0007165
      label: signal transduction
  - preferred_term: cell population proliferation
    modifier: INCREASED
    term:
      id: GO:0008283
      label: cell population proliferation
  downstream:
  - target: Uncontrolled Melanocyte Proliferation
    description: ERK drives cyclin D1 expression and G1/S progression
  - target: Apoptosis Resistance
    description: MAPK signaling promotes survival through multiple mechanisms
- name: Uncontrolled Melanocyte Proliferation
  description: >-
    Constitutive MAPK signaling drives melanocyte proliferation through ERK-mediated
    phosphorylation and stabilization of transcription factors controlling cell cycle
    progression, including upregulation of cyclin D1 and suppression of cell cycle
    inhibitors such as p27.
  cell_types:
  - preferred_term: melanocyte
    term:
      id: CL:0000148
      label: melanocyte
  locations:
  - preferred_term: skin of body
    term:
      id: UBERON:0002097
      label: skin of body
  biological_processes:
  - preferred_term: cell population proliferation
    modifier: INCREASED
    term:
      id: GO:0008283
      label: cell population proliferation
- name: Apoptosis Resistance
  description: >-
    BRAF V600 signaling promotes melanoma cell survival through multiple anti-apoptotic
    mechanisms, including upregulation of BCL2 family members and suppression of
    pro-apoptotic BIM. This contributes to tumor persistence and therapy resistance.
  biological_processes:
  - preferred_term: apoptotic process
    modifier: DECREASED
    term:
      id: GO:0006915
      label: apoptotic process
- name: Acquired MAPK Reactivation and Bypass Resistance
  description: >-
    Most advanced BRAF V600-mutant melanomas initially respond to combined BRAF/MEK
    inhibition, but acquired resistance commonly develops through renewed MAPK
    signaling or parallel survival pathways. Reported mechanisms include secondary
    NRAS mutations, MEK/MAP2K1 mutations, BRAF amplification or splice variants,
    PI3K-AKT activation, and metabolic adaptation toward oxidative phosphorylation.
  biological_processes:
  - preferred_term: MAPK cascade
    modifier: INCREASED
    term:
      id: GO:0000165
      label: MAPK cascade
  - preferred_term: response to xenobiotic stimulus
    modifier: ABNORMAL
    term:
      id: GO:0009410
      label: response to xenobiotic stimulus
- name: Immune Evasion via PD-L1 Upregulation
  conforms_to: "immune_checkpoint_blockade#Adaptive Immune Resistance"
  description: >-
    BRAF V600-mutant melanoma is among the most immunogenic solid tumors due to high
    UV-induced tumor mutational burden generating abundant neoantigens. Tumor-infiltrating
    CD8+ T cells mount anti-tumor responses, but melanoma cells adaptively upregulate
    PD-L1
    in response to interferon-gamma, suppressing T cell cytotoxicity. BRAF-MAPK signaling
    itself also contributes to immune evasion through intrinsic PD-L1 upregulation
    via
    MEK/ERK-dependent mechanisms.
  cell_types:
  - preferred_term: CD8-positive, alpha-beta T cell
    term:
      id: CL:0000625
      label: CD8-positive, alpha-beta T cell
  biological_processes:
  - preferred_term: Negative Regulation of T Cell Mediated Immunity
    term:
      id: GO:0002710
      label: negative regulation of T cell mediated immunity
    modifier: INCREASED
  evidence:
  - reference: PMID:33256089
    supports: SUPPORT
    evidence_source: OTHER
    snippet: >-
      Cancer cells including melanoma cells, upregulate PD-L1 expression
      on the cell surface. T-lymphocytes with surface expression of PD-1,
      interacts with PD-L1 on the tumor, leading to T-cell exhaustion,
      thereby, causing dysfunction of the immune system in detecting and
      eliminating the tumor cells
    explanation: >-
      Review directly describes melanoma cells upregulating PD-L1 to
      engage PD-1 on T lymphocytes, leading to T cell exhaustion and
      immune evasion - supporting the adaptive immune resistance
      mechanism in BRAF-mutant melanoma.
histopathology:
- name: Melanocytic Neoplasm
  finding_term:
    preferred_term: Melanocytic Neoplasm
    term:
      id: NCIT:C7058
      label: Melanocytic Neoplasm
  frequency: VERY_FREQUENT
  description: Malignant melanoma represents a neoplasm stemming from melanocytes.
  evidence:
  - reference: PMID:27268913
    reference_title: "Malignant melanoma: diagnosis, treatment and cancer stem cells."
    supports: SUPPORT
    snippet: "Malignant melanoma represents a neoplasm stemming from melanocytes"
    explanation: Abstract defines melanoma as a neoplasm stemming from melanocytes.

phenotypes:
- category: Dermatologic
  name: Cutaneous Melanoma
  frequency: OBLIGATE
  diagnostic: true
  description: >-
    Melanoma arising from cutaneous melanocytes. BRAF V600-mutant melanomas are
    typically associated with intermittent UV exposure sites and often display
    superficial spreading or nodular histologic patterns.
  phenotype_term:
    preferred_term: Cutaneous melanoma
    term:
      id: HP:0012056
      label: Cutaneous melanoma
- category: Dermatologic
  name: Pigmented Skin Lesion
  frequency: VERY_FREQUENT
  description: >-
    The primary tumor typically presents as an asymmetric, irregularly bordered
    pigmented lesion with color variegation, often arising from a pre-existing nevus
    or de novo on sun-exposed skin.
  phenotype_term:
    preferred_term: Neoplasm of the skin
    term:
      id: HP:0008069
      label: Neoplasm of the skin
genetic:
- name: BRAF V600E
  gene_term:
    preferred_term: BRAF
    term:
      id: hgnc:1097
      label: BRAF
  association: Somatic Oncogenic Mutation
  notes: >-
    The most common BRAF mutation (80-90% of BRAF-mutant melanomas), involving
    substitution of valine with glutamic acid at codon 600. Results in constitutive
    kinase activation and is the primary therapeutic target for BRAF inhibitors.
- name: BRAF V600K
  gene_term:
    preferred_term: BRAF
    term:
      id: hgnc:1097
      label: BRAF
  association: Somatic Oncogenic Mutation
  notes: >-
    Second most common BRAF mutation (10-20% of BRAF-mutant melanomas), substituting
    valine with lysine at codon 600. Also responsive to BRAF/MEK inhibitor therapy
    though possibly with different kinetics.
- name: BRAF V600R
  gene_term:
    preferred_term: BRAF
    term:
      id: hgnc:1097
      label: BRAF
  association: Somatic Oncogenic Mutation
  notes: >-
    Less common BRAF V600 substitution that still activates BRAF kinase and is
    grouped with other actionable V600 alterations when considering BRAF/MEK-targeted
    therapy.
- name: BRAF V600M
  gene_term:
    preferred_term: BRAF
    term:
      id: hgnc:1097
      label: BRAF
  association: Somatic Oncogenic Mutation
  notes: >-
    Rare BRAF V600 substitution included in the broader BRAF V600-mutant melanoma
    spectrum; mechanistically it is treated as an activating MAPK-pathway driver.
treatments:
- name: Dabrafenib plus Trametinib
  description: >-
    First-line targeted therapy combining BRAF inhibitor dabrafenib with MEK inhibitor
    trametinib. Combination therapy achieves higher response rates (approximately
    70%)
    and longer duration of response compared to BRAF inhibitor monotherapy, while
    reducing paradoxical MAPK activation and cutaneous squamous cell carcinomas.
  treatment_term:
    preferred_term: targeted therapy
    term:
      id: NCIT:C93352
      label: Targeted Therapy
    therapeutic_agent:
    - preferred_term: dabrafenib
      term:
        id: CHEBI:75045
        label: dabrafenib
    - preferred_term: trametinib
      term:
        id: CHEBI:75998
        label: trametinib
- name: Vemurafenib plus Cobimetinib
  description: >-
    Alternative BRAF plus MEK inhibitor combination. Vemurafenib was the first BRAF
    inhibitor approved for melanoma. Combined with the MEK inhibitor cobimetinib
    to improve efficacy and reduce paradoxical activation side effects.
  pdb_structures:
  - pdb_id: 3OG7
    description: BRAF V600E kinase domain in complex with vemurafenib (PLX4032), showing selective binding to the mutant active conformation that drives melanoma
    resolution_angstrom: 2.45
    method: X-ray
    ligand: vemurafenib
    target_protein: BRAF V600E kinase domain
    publication: PMID:20823844
  treatment_term:
    preferred_term: targeted therapy
    term:
      id: NCIT:C93352
      label: Targeted Therapy
    therapeutic_agent:
    - preferred_term: vemurafenib
      term:
        id: CHEBI:63637
        label: vemurafenib
    - preferred_term: cobimetinib
      term:
        id: CHEBI:90851
        label: cobimetinib
- name: Encorafenib plus Binimetinib
  description: >-
    Third-generation BRAF plus MEK inhibitor combination offering improved
    tolerability profile. Encorafenib has a longer half-life than other BRAF
    inhibitors, potentially reducing dosing frequency.
  treatment_term:
    preferred_term: targeted therapy
    term:
      id: NCIT:C93352
      label: Targeted Therapy
    therapeutic_agent:
    - preferred_term: encorafenib
      term:
        id: NCIT:C98283
        label: Encorafenib
    - preferred_term: binimetinib
      term:
        id: CHEBI:145371
        label: binimetinib
- name: Immune Checkpoint Inhibitors
  description: >-
    Anti-PD-1 antibodies (pembrolizumab, nivolumab) alone or combined with
    anti-CTLA-4 (ipilimumab) are also effective in BRAF-mutant melanoma. The
    optimal sequencing of targeted therapy versus immunotherapy remains an active
    area of investigation.
  treatment_term:
    preferred_term: immunotherapy
    term:
      id: NCIT:C15262
      label: Immunotherapy
    therapeutic_agent:
    - preferred_term: pembrolizumab
      term:
        id: NCIT:C106432
        label: Pembrolizumab
    - preferred_term: nivolumab
      term:
        id: NCIT:C68814
        label: Nivolumab
    - preferred_term: ipilimumab
      term:
        id: CHEBI:231679
        label: ipilimumab
  target_mechanisms:
  - target: Immune Evasion via PD-L1 Upregulation
    treatment_effect: INHIBITS
    description: >-
      Anti-PD-1/anti-CTLA-4 antibodies block checkpoint-mediated immune evasion,
      restoring the anti-tumor T cell response against neoantigen-rich melanoma cells.
      Melanoma's high mutational burden from UV exposure provides abundant neoantigens,
      making it among the most responsive tumor types to checkpoint blockade.
    evidence:
    - reference: PMID:33256089
      supports: SUPPORT
      evidence_source: OTHER
      snippet: >-
        FDA approved the combination therapy of anti-CTLA-4 (ipilimumab) with
        anti-PD-1 (nivolumab), for the treatment of unresectable or metastatic
        melanoma, and resulted in improved response rates by 50%โ€“60%, with
        enhanced durable survival compared to either agent alone
      explanation: >-
        Review reports FDA-approved combination of ipilimumab (anti-CTLA-4)
        and nivolumab (anti-PD-1) in melanoma with 50-60% response rates
        and durable survival, directly supporting checkpoint inhibitor
        efficacy against melanoma immune evasion.
disease_term:
  preferred_term: cutaneous melanoma
  term:
    id: MONDO:0005012
    label: cutaneous melanoma
notes: >-
  BRAF V600 mutations define a therapeutically actionable melanoma subtype. Resistance
  to BRAF/MEK inhibitors eventually develops in most patients through reactivation
  of
  MAPK signaling (MEK mutations, BRAF amplification) or activation of bypass pathways
  (PI3K/AKT, RAF1). Combination strategies targeting multiple pathways or sequencing
  with immunotherapy are areas of active research.

classifications:
  icdo_morphology:
    classification_value: Melanoma
  harrisons_chapter:
  - classification_value: cancer
  - classification_value: solid tumor
references:
- reference: DOI:10.1002/jvc2.544
  title: Update on the treatment of <i>BRAF</i>mut metastatic melanoma and future perspectives
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-falcon.md
  findings:
  - statement: vโ€Raf murine sarcoma viral oncogene homolog B (BRAF) mutations were first identified in melanoma in 2002, leading to increased cell division and proliferation, and resultant tumour growth.
    supporting_text: vโ€Raf murine sarcoma viral oncogene homolog B (BRAF) mutations were first identified in melanoma in 2002, leading to increased cell division and proliferation, and resultant tumour growth.
    evidence:
    - reference: DOI:10.1002/jvc2.544
      reference_title: Update on the treatment of <i>BRAF</i>mut metastatic melanoma and future perspectives
      supports: SUPPORT
      evidence_source: OTHER
      snippet: vโ€Raf murine sarcoma viral oncogene homolog B (BRAF) mutations were first identified in melanoma in 2002, leading to increased cell division and proliferation, and resultant tumour growth.
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: DOI:10.1002/jvc2.70108
  title: 'Clinical Effectiveness of Interventions to Increase Selfโ€Surveillance in People at High Risk of Melanoma: A Systematic Review'
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-falcon.md
  findings:
  - statement: People at high risk of cutaneous melanoma are recommended to undertake regular skin selfโ€examination (SSE), but the effectiveness of this is uncertain.
    supporting_text: People at high risk of cutaneous melanoma are recommended to undertake regular skin selfโ€examination (SSE), but the effectiveness of this is uncertain.
    evidence:
    - reference: DOI:10.1002/jvc2.70108
      reference_title: 'Clinical Effectiveness of Interventions to Increase Selfโ€Surveillance in People at High Risk of Melanoma: A Systematic Review'
      supports: SUPPORT
      evidence_source: OTHER
      snippet: People at high risk of cutaneous melanoma are recommended to undertake regular skin selfโ€examination (SSE), but the effectiveness of this is uncertain.
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: DOI:10.1007/s12094-024-03497-2
  title: SEOM-GEM clinical guidelines for cutaneous melanoma (2023)
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-falcon.md
  findings:
  - statement: Early diagnosis and treatment administration are key for increasing the chances of survival.
    supporting_text: Early diagnosis and treatment administration are key for increasing the chances of survival.
    evidence:
    - reference: DOI:10.1007/s12094-024-03497-2
      reference_title: SEOM-GEM clinical guidelines for cutaneous melanoma (2023)
      supports: SUPPORT
      evidence_source: HUMAN_CLINICAL
      snippet: Early diagnosis and treatment administration are key for increasing the chances of survival.
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: DOI:10.1007/s12325-024-02883-0
  title: 'BRAFV600E Metastatic Melanoma Journey: A Perspective from a Patient and his Oncologist'
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-falcon.md
  findings:
  - statement: 'BRAFV600E Metastatic Melanoma Journey: A Perspective from a Patient and his Oncologist'
    supporting_text: 'BRAFV600E Metastatic Melanoma Journey: A Perspective from a Patient and his Oncologist'
- reference: DOI:10.1016/j.ajpath.2012.06.002
  title: Targeting BRAF in an Inducible Murine Model of Melanoma
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-falcon.md
  findings:
  - statement: Targeting BRAF in an Inducible Murine Model of Melanoma
    supporting_text: Targeting BRAF in an Inducible Murine Model of Melanoma
- reference: DOI:10.1016/j.eclinm.2023.102290
  title: 'Dabrafenib plus trametinib versus anti-PD-1 monotherapy as adjuvant therapy in BRAF V600-mutant stage III melanoma after definitive surgery: a multicenter, retrospective cohort study'
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-falcon.md
  findings:
  - statement: 'Dabrafenib plus trametinib versus anti-PD-1 monotherapy as adjuvant therapy in BRAF V600-mutant stage III melanoma after definitive surgery: a multicenter, retrospective cohort study'
    supporting_text: 'Dabrafenib plus trametinib versus anti-PD-1 monotherapy as adjuvant therapy in BRAF V600-mutant stage III melanoma after definitive surgery: a multicenter, retrospective cohort study'
- reference: DOI:10.1038/s41467-023-44475-6
  title: 'Sequential immunotherapy and targeted therapy for metastatic BRAF V600 mutated melanoma: 4-year survival and biomarkers evaluation from the phase II SECOMBIT trial'
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-falcon.md
  findings:
  - statement: 'Sequential immunotherapy and targeted therapy for metastatic BRAF V600 mutated melanoma: 4-year survival and biomarkers evaluation from the phase II SECOMBIT trial'
    supporting_text: No prospective data were available prior to 2021 to inform selection between combination BRAF and MEK inhibition versus dual blockade of programmed cell death protein-1 (PD-1) and cytotoxic T lymphocyte antigen-4 (CTLA-4) as first-line treatment options for BRAFV600-mutant melanoma.
    evidence:
    - reference: DOI:10.1038/s41467-023-44475-6
      reference_title: 'Sequential immunotherapy and targeted therapy for metastatic BRAF V600 mutated melanoma: 4-year survival and biomarkers evaluation from the phase II SECOMBIT trial'
      supports: SUPPORT
      evidence_source: HUMAN_CLINICAL
      snippet: No prospective data were available prior to 2021 to inform selection between combination BRAF and MEK inhibition versus dual blockade of programmed cell death protein-1 (PD-1) and cytotoxic T lymphocyte antigen-4 (CTLA-4) as first-line treatment options for BRAFV600-mutant melanoma.
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: DOI:10.1038/s41591-024-03077-5
  title: 'Neoadjuvant pembrolizumab, dabrafenib and trametinib in BRAFV600-mutant resectable melanoma: the randomized phase 2 NeoTrio trial'
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-falcon.md
  findings:
  - statement: Immune checkpoint inhibitors and BRAF-targeted therapy each improve survival in melanoma.
    supporting_text: Immune checkpoint inhibitors and BRAF-targeted therapy each improve survival in melanoma.
    evidence:
    - reference: DOI:10.1038/s41591-024-03077-5
      reference_title: 'Neoadjuvant pembrolizumab, dabrafenib and trametinib in BRAFV600-mutant resectable melanoma: the randomized phase 2 NeoTrio trial'
      supports: SUPPORT
      evidence_source: HUMAN_CLINICAL
      snippet: Immune checkpoint inhibitors and BRAF-targeted therapy each improve survival in melanoma.
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: DOI:10.1056/evidoa2400087
  title: Sequencing of Checkpoint or BRAF/MEK Inhibitors on Brain Metastases in Melanoma
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-falcon.md
  findings:
  - statement: Sequencing of Checkpoint or BRAF/MEK Inhibitors on Brain Metastases in Melanoma
    supporting_text: Sequencing of Checkpoint or BRAF/MEK Inhibitors on Brain Metastases in Melanoma
- reference: DOI:10.1080/03007995.2018.1501351
  title: Healthcare resource utilization in patients with metastatic melanoma receiving first-line therapy with dabrafenibโ€‰+โ€‰trametinib versus nivolumab or pembrolizumab monotherapy
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-falcon.md
  findings:
  - statement: Healthcare resource utilization in patients with metastatic melanoma receiving first-line therapy with dabrafenibโ€‰+โ€‰trametinib versus nivolumab or pembrolizumab monotherapy
    supporting_text: Healthcare resource utilization in patients with metastatic melanoma receiving first-line therapy with dabrafenibโ€‰+โ€‰trametinib versus nivolumab or pembrolizumab monotherapy
- reference: DOI:10.1084/jem.20181522
  title: Use of extracellular vesicles from lymphatic drainage as surrogate markers of melanoma progression and <i>BRAF</i> <i>V600E</i> mutation
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-falcon.md
  findings:
  - statement: Liquid biopsies from cancer patients have the potential to improve diagnosis and prognosis.
    supporting_text: Liquid biopsies from cancer patients have the potential to improve diagnosis and prognosis.
    evidence:
    - reference: DOI:10.1084/jem.20181522
      reference_title: Use of extracellular vesicles from lymphatic drainage as surrogate markers of melanoma progression and <i>BRAF</i> <i>V600E</i> mutation
      supports: SUPPORT
      evidence_source: HUMAN_CLINICAL
      snippet: Liquid biopsies from cancer patients have the potential to improve diagnosis and prognosis.
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: DOI:10.1158/1078-0432.ccr-25-3262
  title: Exploratory Analysis of Biomarkers and Treatment Outcomes from the COLUMBUS Study in BRAF V600E/Kโ€“Mutant Advanced or Metastatic Melanoma
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-falcon.md
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: 'Treatment with encorafenib ยฑ binimetinib is associated with improved survival versus vemurafenib in patients with BRAF V600E/Kโ€“mutant advanced melanoma.'
    supporting_text: 'Treatment with encorafenib ยฑ binimetinib is associated with improved survival versus vemurafenib in patients with BRAF V600E/Kโ€“mutant advanced melanoma.'
    evidence:
    - reference: DOI:10.1158/1078-0432.ccr-25-3262
      reference_title: Exploratory Analysis of Biomarkers and Treatment Outcomes from the COLUMBUS Study in BRAF V600E/Kโ€“Mutant Advanced or Metastatic Melanoma
      supports: SUPPORT
      evidence_source: HUMAN_CLINICAL
      snippet: 'Treatment with encorafenib ยฑ binimetinib is associated with improved survival versus vemurafenib in patients with BRAF V600E/Kโ€“mutant advanced melanoma.'
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: DOI:10.1177/10732748241274978
  title: 'Cutaneous Oncology: Strategies for Melanoma Prevention, Diagnosis, and Therapy'
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-falcon.md
  findings:
  - statement: Skin cancer comprises one-third of all diagnosed cancer cases and remains a major health concern.
    supporting_text: Skin cancer comprises one-third of all diagnosed cancer cases and remains a major health concern.
    evidence:
    - reference: DOI:10.1177/10732748241274978
      reference_title: 'Cutaneous Oncology: Strategies for Melanoma Prevention, Diagnosis, and Therapy'
      supports: SUPPORT
      evidence_source: OTHER
      snippet: Skin cancer comprises one-third of all diagnosed cancer cases and remains a major health concern.
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: DOI:10.1186/s43556-026-00425-4
  title: 'BRAF inhibitor resistance in melanoma: from resistance mechanisms to therapeutic innovations'
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-falcon.md
  findings:
  - statement: BRAF inhibitors (BRAFi) have transformed the treatment of BRAF mutant melanoma, but inherent and acquired resistance remains a major barrier to curative outcomes.
    supporting_text: BRAF inhibitors (BRAFi) have transformed the treatment of BRAF mutant melanoma, but inherent and acquired resistance remains a major barrier to curative outcomes.
    evidence:
    - reference: DOI:10.1186/s43556-026-00425-4
      reference_title: 'BRAF inhibitor resistance in melanoma: from resistance mechanisms to therapeutic innovations'
      supports: SUPPORT
      evidence_source: OTHER
      snippet: BRAF inhibitors (BRAFi) have transformed the treatment of BRAF mutant melanoma, but inherent and acquired resistance remains a major barrier to curative outcomes.
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: DOI:10.3109/0284186x.2015.1114677
  title: Trends in melanoma in the elderly in Denmark, 1980โ€“2012
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-falcon.md
  findings:
  - statement: Trends in melanoma in the elderly in Denmark, 1980โ€“2012
    supporting_text: Trends in melanoma in the elderly in Denmark, 1980โ€“2012
- reference: DOI:10.3389/fonc.2024.1504142
  title: 'The evolution of BRAF-targeted therapies in melanoma: overcoming hurdles and unleashing novel strategies'
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-falcon.md
  findings:
  - statement: Melanoma, a highly aggressive form of skin cancer, poses a significant global health burden, with 331,647 new cases and 58,645 deaths reported in 2022.
    supporting_text: Melanoma, a highly aggressive form of skin cancer, poses a significant global health burden, with 331,647 new cases and 58,645 deaths reported in 2022.
    evidence:
    - reference: DOI:10.3389/fonc.2024.1504142
      reference_title: 'The evolution of BRAF-targeted therapies in melanoma: overcoming hurdles and unleashing novel strategies'
      supports: SUPPORT
      evidence_source: HUMAN_CLINICAL
      snippet: Melanoma, a highly aggressive form of skin cancer, poses a significant global health burden, with 331,647 new cases and 58,645 deaths reported in 2022.
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: DOI:10.3390/cancers15092607
  title: 'BRAF V600-Mutated Metastatic Melanoma and Targeted Therapy Resistance: An Update of the Current Knowledge'
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-falcon.md
  findings:
  - statement: Melanoma is the most common cause of death in skin cancer due to its high metastatic potential.
    supporting_text: Melanoma is the most common cause of death in skin cancer due to its high metastatic potential.
    evidence:
    - reference: DOI:10.3390/cancers15092607
      reference_title: 'BRAF V600-Mutated Metastatic Melanoma and Targeted Therapy Resistance: An Update of the Current Knowledge'
      supports: SUPPORT
      evidence_source: HUMAN_CLINICAL
      snippet: Melanoma is the most common cause of death in skin cancer due to its high metastatic potential.
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: DOI:10.3390/cancers15164026
  title: 'BRAF Mutations in Melanoma: Biological Aspects, Therapeutic Implications, and Circulating Biomarkers'
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-falcon.md
  findings:
  - statement: Melanoma is an aggressive form of skin cancer resulting from the malignant transformation of melanocytes.
    supporting_text: Melanoma is an aggressive form of skin cancer resulting from the malignant transformation of melanocytes.
    evidence:
    - reference: DOI:10.3390/cancers15164026
      reference_title: 'BRAF Mutations in Melanoma: Biological Aspects, Therapeutic Implications, and Circulating Biomarkers'
      supports: SUPPORT
      evidence_source: HUMAN_CLINICAL
      snippet: Melanoma is an aggressive form of skin cancer resulting from the malignant transformation of melanocytes.
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: DOI:10.3390/cancers16244186
  title: New Screening Methods in Melanoma
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-falcon.md
  findings:
  - statement: The World Health Organisation reports that melanoma had an incidence of 331,722 cases worldwide in 2022, ranking it 17th on the list of the most prevalent malignancies.
    supporting_text: The World Health Organisation reports that melanoma had an incidence of 331,722 cases worldwide in 2022, ranking it 17th on the list of the most prevalent malignancies.
    evidence:
    - reference: DOI:10.3390/cancers16244186
      reference_title: New Screening Methods in Melanoma
      supports: SUPPORT
      evidence_source: COMPUTATIONAL
      snippet: The World Health Organisation reports that melanoma had an incidence of 331,722 cases worldwide in 2022, ranking it 17th on the list of the most prevalent malignancies.
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: DOI:10.3390/cancers17111784
  title: 'Skin Photodamage and Melanomagenesis: A Comprehensive Review'
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-falcon.md
  findings:
  - statement: Melanoma, the most aggressive form of skin cancer, still represents a significant and growing public health concern.
    supporting_text: Melanoma, the most aggressive form of skin cancer, still represents a significant and growing public health concern.
    evidence:
    - reference: DOI:10.3390/cancers17111784
      reference_title: 'Skin Photodamage and Melanomagenesis: A Comprehensive Review'
      supports: SUPPORT
      evidence_source: HUMAN_CLINICAL
      snippet: Melanoma, the most aggressive form of skin cancer, still represents a significant and growing public health concern.
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: DOI:10.3390/cancers17193152
  title: 'Treatment-Related Adverse Events in Individuals with BRAF-Mutant Cutaneous Melanoma Treated with BRAF and MEK Inhibitors: A Systematic Review and Meta-Analysis'
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-falcon.md
  findings:
  - statement: 'Treatment-Related Adverse Events in Individuals with BRAF-Mutant Cutaneous Melanoma Treated with BRAF and MEK Inhibitors: A Systematic Review and Meta-Analysis'
    supporting_text: We conducted a systematic review of clinical trials and case reports analyzing the safety of the currently approved BRAF and MEK inhibitors in adults with cutaneous melanoma (CM), and a meta-analysis to estimate the pooled prevalence of treatment-related adverse events (TRAEs).
    evidence:
    - reference: DOI:10.3390/cancers17193152
      reference_title: 'Treatment-Related Adverse Events in Individuals with BRAF-Mutant Cutaneous Melanoma Treated with BRAF and MEK Inhibitors: A Systematic Review and Meta-Analysis'
      supports: SUPPORT
      evidence_source: OTHER
      snippet: We conducted a systematic review of clinical trials and case reports analyzing the safety of the currently approved BRAF and MEK inhibitors in adults with cutaneous melanoma (CM), and a meta-analysis to estimate the pooled prevalence of treatment-related adverse events (TRAEs).
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: DOI:10.3390/cells9051289
  title: 'From Tank to Treatment: Modeling Melanoma in Zebrafish'
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-falcon.md
  findings:
  - statement: Melanoma is the deadliest form of skin cancer and one of few cancers with a growing incidence.
    supporting_text: Melanoma is the deadliest form of skin cancer and one of few cancers with a growing incidence.
    evidence:
    - reference: DOI:10.3390/cells9051289
      reference_title: 'From Tank to Treatment: Modeling Melanoma in Zebrafish'
      supports: SUPPORT
      evidence_source: MODEL_ORGANISM
      snippet: Melanoma is the deadliest form of skin cancer and one of few cancers with a growing incidence.
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: DOI:10.3390/curroncol31120568
  title: 'Braf-Mutant Melanomas: Biology and Therapy'
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-falcon.md
  findings:
  - statement: The incidence of melanoma, the most lethal form of skin cancer, has increased mainly due to ultraviolet exposure.
    supporting_text: The incidence of melanoma, the most lethal form of skin cancer, has increased mainly due to ultraviolet exposure.
    evidence:
    - reference: DOI:10.3390/curroncol31120568
      reference_title: 'Braf-Mutant Melanomas: Biology and Therapy'
      supports: SUPPORT
      evidence_source: HUMAN_CLINICAL
      snippet: The incidence of melanoma, the most lethal form of skin cancer, has increased mainly due to ultraviolet exposure.
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: DOI:10.3390/jcm13061607
  title: Primary Cutaneous Melanomaโ€”Management in 2024
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-falcon.md
  findings:
  - statement: Maximizing survival for patients with primary cutaneous melanomas (melanomas) depends on an early diagnosis and appropriate management.
    supporting_text: Maximizing survival for patients with primary cutaneous melanomas (melanomas) depends on an early diagnosis and appropriate management.
    evidence:
    - reference: DOI:10.3390/jcm13061607
      reference_title: Primary Cutaneous Melanomaโ€”Management in 2024
      supports: SUPPORT
      evidence_source: HUMAN_CLINICAL
      snippet: Maximizing survival for patients with primary cutaneous melanomas (melanomas) depends on an early diagnosis and appropriate management.
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: DOI:10.3390/ph18081235
  title: 'Molecular Basis of BRAF Inhibitor Resistance in Melanoma: A Systematic Review'
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-falcon.md
  findings:
  - statement: Melanoma, the deadliest human skin cancer, frequently harbors activating BRAF mutations, with V600E being the most prevalent.
    supporting_text: Melanoma, the deadliest human skin cancer, frequently harbors activating BRAF mutations, with V600E being the most prevalent.
    evidence:
    - reference: DOI:10.3390/ph18081235
      reference_title: 'Molecular Basis of BRAF Inhibitor Resistance in Melanoma: A Systematic Review'
      supports: SUPPORT
      evidence_source: OTHER
      snippet: Melanoma, the deadliest human skin cancer, frequently harbors activating BRAF mutations, with V600E being the most prevalent.
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:20806172
  title: '[Early diagnosis of skin cancer].'
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: Survival from melanoma is strongly related to tumour thickness.
    supporting_text: Survival from melanoma is strongly related to tumour thickness.
    evidence:
    - reference: PMID:20806172
      reference_title: '[Early diagnosis of skin cancer].'
      supports: SUPPORT
      evidence_source: HUMAN_CLINICAL
      snippet: Survival from melanoma is strongly related to tumour thickness.
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:21253789
  title: 'Thinking about the role (largely ignored) of heavy metals in cancer prevention: hexavalent chromium and melanoma as a case in point.'
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: '2011;188:65-74. doi: 10.1007/978-3-642-10858-7_5.'
    supporting_text: '2011;188:65-74. doi: 10.1007/978-3-642-10858-7_5.'
    evidence:
    - reference: PMID:21253789
      reference_title: 'Thinking about the role (largely ignored) of heavy metals in cancer prevention: hexavalent chromium and melanoma as a case in point.'
      supports: SUPPORT
      evidence_source: HUMAN_CLINICAL
      snippet: '2011;188:65-74. doi: 10.1007/978-3-642-10858-7_5.'
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:22536370
  title: Routine multiplex mutational profiling of melanomas enables enrollment in genotype-driven therapeutic trials.
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: '2012;7(4):e35309. doi: 10.1371/journal.pone.0035309.'
    supporting_text: '2012;7(4):e35309. doi: 10.1371/journal.pone.0035309.'
    evidence:
    - reference: PMID:22536370
      reference_title: Routine multiplex mutational profiling of melanomas enables enrollment in genotype-driven therapeutic trials.
      supports: SUPPORT
      evidence_source: OTHER
      snippet: '2012;7(4):e35309. doi: 10.1371/journal.pone.0035309.'
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:22865452
  title: Inactivation of the HIF-1ฮฑ/PDK3 signaling axis drives melanoma toward mitochondrial oxidative metabolism and potentiates the therapeutic activity of pro-oxidants.
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: '2012 Oct 1;72(19):5035-47. doi: 10.1158/0008-5472.CAN-12-0979.'
    supporting_text: '2012 Oct 1;72(19):5035-47. doi: 10.1158/0008-5472.CAN-12-0979.'
    evidence:
    - reference: PMID:22865452
      reference_title: Inactivation of the HIF-1ฮฑ/PDK3 signaling axis drives melanoma toward mitochondrial oxidative metabolism and potentiates the therapeutic activity of pro-oxidants.
      supports: SUPPORT
      evidence_source: HUMAN_CLINICAL
      snippet: '2012 Oct 1;72(19):5035-47. doi: 10.1158/0008-5472.CAN-12-0979.'
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:23569304
  title: Pharmacodynamic effects and mechanisms of resistance to vemurafenib in patients with metastatic melanoma.
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: '2013 May 10;31(14):1767-74. doi: 10.1200/JCO.2012.44.7888.'
    supporting_text: '2013 May 10;31(14):1767-74. doi: 10.1200/JCO.2012.44.7888.'
    evidence:
    - reference: PMID:23569304
      reference_title: Pharmacodynamic effects and mechanisms of resistance to vemurafenib in patients with metastatic melanoma.
      supports: SUPPORT
      evidence_source: HUMAN_CLINICAL
      snippet: '2013 May 10;31(14):1767-74. doi: 10.1200/JCO.2012.44.7888.'
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:24119386
  title: Improvement of the quality of BRAF testing in melanomas with nationwide external quality assessment, for the BRAF EQA group.
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: Knowledge about tumour gene mutation status is essential for the treatment of increasing numbers of cancer patients, and testing quality has a major impact on treatment response and cost.
    supporting_text: Knowledge about tumour gene mutation status is essential for the treatment of increasing numbers of cancer patients, and testing quality has a major impact on treatment response and cost.
    evidence:
    - reference: PMID:24119386
      reference_title: Improvement of the quality of BRAF testing in melanomas with nationwide external quality assessment, for the BRAF EQA group.
      supports: SUPPORT
      evidence_source: HUMAN_CLINICAL
      snippet: Knowledge about tumour gene mutation status is essential for the treatment of increasing numbers of cancer patients, and testing quality has a major impact on treatment response and cost.
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:24148783
  title: The genetic heterogeneity and mutational burden of engineered melanomas in zebrafish models.
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: Melanoma is the most deadly form of skin cancer.
    supporting_text: Melanoma is the most deadly form of skin cancer.
    evidence:
    - reference: PMID:24148783
      reference_title: The genetic heterogeneity and mutational burden of engineered melanomas in zebrafish models.
      supports: SUPPORT
      evidence_source: MODEL_ORGANISM
      snippet: Melanoma is the most deadly form of skin cancer.
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:24154489
  title: Characterization of vemurafenib phototoxicity in a mouse model.
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: '2014 Jan;137(1):259-67. doi: 10.1093/toxsci/kft237.'
    supporting_text: '2014 Jan;137(1):259-67. doi: 10.1093/toxsci/kft237.'
    evidence:
    - reference: PMID:24154489
      reference_title: Characterization of vemurafenib phototoxicity in a mouse model.
      supports: SUPPORT
      evidence_source: MODEL_ORGANISM
      snippet: '2014 Jan;137(1):259-67. doi: 10.1093/toxsci/kft237.'
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:24424406
  title: Analysis of the B-RafV600E mutation in cutaneous melanoma patients with occupational sun exposure.
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: '2014 Mar;31(3):1079-82. doi: 10.3892/or.2014.2977.'
    supporting_text: '2014 Mar;31(3):1079-82. doi: 10.3892/or.2014.2977.'
    evidence:
    - reference: PMID:24424406
      reference_title: Analysis of the B-RafV600E mutation in cutaneous melanoma patients with occupational sun exposure.
      supports: SUPPORT
      evidence_source: HUMAN_CLINICAL
      snippet: '2014 Mar;31(3):1079-82. doi: 10.3892/or.2014.2977.'
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:24610826
  title: 'Molecular pathways: BRAF induces bioenergetic adaptation by attenuating oxidative phosphorylation.'
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: '2014 May 1;20(9):2257-63. doi: 10.1158/1078-0432.CCR-13-0898.'
    supporting_text: '2014 May 1;20(9):2257-63. doi: 10.1158/1078-0432.CCR-13-0898.'
    evidence:
    - reference: PMID:24610826
      reference_title: 'Molecular pathways: BRAF induces bioenergetic adaptation by attenuating oxidative phosphorylation.'
      supports: SUPPORT
      evidence_source: OTHER
      snippet: '2014 May 1;20(9):2257-63. doi: 10.1158/1078-0432.CCR-13-0898.'
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:24713734
  title: BRAF pyrosequencing analysis aided by a lookup table.
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: '2014 May;141(5):639-47. doi: 10.1309/AJCPVWH1K2ZIHHTV.'
    supporting_text: '2014 May;141(5):639-47. doi: 10.1309/AJCPVWH1K2ZIHHTV.'
    evidence:
    - reference: PMID:24713734
      reference_title: BRAF pyrosequencing analysis aided by a lookup table.
      supports: SUPPORT
      evidence_source: COMPUTATIONAL
      snippet: '2014 May;141(5):639-47. doi: 10.1309/AJCPVWH1K2ZIHHTV.'
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:24903021
  title: Response to BRAF inhibition in melanoma is enhanced when combined with immune checkpoint blockade.
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: '2014 Jul;2(7):643-54. doi: 10.1158/2326-6066.CIR-13-0215.'
    supporting_text: '2014 Jul;2(7):643-54. doi: 10.1158/2326-6066.CIR-13-0215.'
    evidence:
    - reference: PMID:24903021
      reference_title: Response to BRAF inhibition in melanoma is enhanced when combined with immune checkpoint blockade.
      supports: SUPPORT
      evidence_source: OTHER
      snippet: '2014 Jul;2(7):643-54. doi: 10.1158/2326-6066.CIR-13-0215.'
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:25048604
  title: Association between BRAFV600E and NRASQ61R mutations and clinicopathologic characteristics, risk factors and clinical outcome of primary invasive cutaneous melanoma.
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: '2014 Oct;25(10):1379-86. doi: 10.1007/s10552-014-0443-x.'
    supporting_text: '2014 Oct;25(10):1379-86. doi: 10.1007/s10552-014-0443-x.'
    evidence:
    - reference: PMID:25048604
      reference_title: Association between BRAFV600E and NRASQ61R mutations and clinicopathologic characteristics, risk factors and clinical outcome of primary invasive cutaneous melanoma.
      supports: SUPPORT
      evidence_source: OTHER
      snippet: '2014 Oct;25(10):1379-86. doi: 10.1007/s10552-014-0443-x.'
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:25069660
  title: Skin cancer prevention campaign aimed at beachgoers on the Costa del Sol (southern Spain).
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: Sunbathing on the beach is one of the main risks for skin cancer.
    supporting_text: Sunbathing on the beach is one of the main risks for skin cancer.
    evidence:
    - reference: PMID:25069660
      reference_title: Skin cancer prevention campaign aimed at beachgoers on the Costa del Sol (southern Spain).
      supports: SUPPORT
      evidence_source: HUMAN_CLINICAL
      snippet: Sunbathing on the beach is one of the main risks for skin cancer.
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:25357015
  title: Clinicopathological characteristics and mutation profiling in primary cutaneous melanoma.
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: The incidence of mutations in malignant melanoma varies remarkably according to the subtype of melanoma, and this in itself is affected by racial and geographical factors.
    supporting_text: The incidence of mutations in malignant melanoma varies remarkably according to the subtype of melanoma, and this in itself is affected by racial and geographical factors.
    evidence:
    - reference: PMID:25357015
      reference_title: Clinicopathological characteristics and mutation profiling in primary cutaneous melanoma.
      supports: SUPPORT
      evidence_source: HUMAN_CLINICAL
      snippet: The incidence of mutations in malignant melanoma varies remarkably according to the subtype of melanoma, and this in itself is affected by racial and geographical factors.
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:25456393
  title: 'Lymph node metastases of melanoma: challenges for BRAF mutation detection.'
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: '2015 Jan;46(1):113-9. doi: 10.1016/j.humpath.2014.09.014.'
    supporting_text: '2015 Jan;46(1):113-9. doi: 10.1016/j.humpath.2014.09.014.'
    evidence:
    - reference: PMID:25456393
      reference_title: 'Lymph node metastases of melanoma: challenges for BRAF mutation detection.'
      supports: SUPPORT
      evidence_source: COMPUTATIONAL
      snippet: '2015 Jan;46(1):113-9. doi: 10.1016/j.humpath.2014.09.014.'
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:25724524
  title: Contribution of Beta-HPV Infection and UV Damage to Rapid-Onset Cutaneous Squamous Cell Carcinoma during BRAF-Inhibition Therapy.
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: '2015 Jun 1;21(11):2624-34. doi: 10.1158/1078-0432.CCR-14-2667.'
    supporting_text: '2015 Jun 1;21(11):2624-34. doi: 10.1158/1078-0432.CCR-14-2667.'
    evidence:
    - reference: PMID:25724524
      reference_title: Contribution of Beta-HPV Infection and UV Damage to Rapid-Onset Cutaneous Squamous Cell Carcinoma during BRAF-Inhibition Therapy.
      supports: SUPPORT
      evidence_source: OTHER
      snippet: '2015 Jun 1;21(11):2624-34. doi: 10.1158/1078-0432.CCR-14-2667.'
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:26182194
  title: Nephrotoxicity of the BRAF Inhibitors Vemurafenib and Dabrafenib.
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: '2015 Nov;1(8):1133-4. doi: 10.1001/jamaoncol.2015.1713.'
    supporting_text: '2015 Nov;1(8):1133-4. doi: 10.1001/jamaoncol.2015.1713.'
    evidence:
    - reference: PMID:26182194
      reference_title: Nephrotoxicity of the BRAF Inhibitors Vemurafenib and Dabrafenib.
      supports: SUPPORT
      evidence_source: HUMAN_CLINICAL
      snippet: '2015 Nov;1(8):1133-4. doi: 10.1001/jamaoncol.2015.1713.'
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:26921540
  title: Multicenter Evaluation of a Novel Automated Rapid Detection System of BRAF Status in Formalin-Fixed, Paraffin-Embedded Tissues.
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: '2016 May;18(3):370-377. doi: 10.1016/j.jmoldx.2015.12.005.'
    supporting_text: '2016 May;18(3):370-377. doi: 10.1016/j.jmoldx.2015.12.005.'
    evidence:
    - reference: PMID:26921540
      reference_title: Multicenter Evaluation of a Novel Automated Rapid Detection System of BRAF Status in Formalin-Fixed, Paraffin-Embedded Tissues.
      supports: SUPPORT
      evidence_source: HUMAN_CLINICAL
      snippet: '2016 May;18(3):370-377. doi: 10.1016/j.jmoldx.2015.12.005.'
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:27221301
  title: '[The effect of solar ultraviolet radiation (UVR) on induction of skin cancers].'
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: BRAF gene mutations were observed in ~50% of CMM cases.
    supporting_text: BRAF gene mutations were observed in ~50% of CMM cases.
    evidence:
    - reference: PMID:27221301
      reference_title: '[The effect of solar ultraviolet radiation (UVR) on induction of skin cancers].'
      supports: SUPPORT
      evidence_source: HUMAN_CLINICAL
      snippet: BRAF gene mutations were observed in ~50% of CMM cases.
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:28424234
  title: 'BRAF V600 mutation detection in melanoma: a comparison of two laboratory testing methods.'
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: '2017 Nov;70(11):935-940. doi: 10.1136/jclinpath-2017-204367.'
    supporting_text: '2017 Nov;70(11):935-940. doi: 10.1136/jclinpath-2017-204367.'
    evidence:
    - reference: PMID:28424234
      reference_title: 'BRAF V600 mutation detection in melanoma: a comparison of two laboratory testing methods.'
      supports: SUPPORT
      evidence_source: OTHER
      snippet: '2017 Nov;70(11):935-940. doi: 10.1136/jclinpath-2017-204367.'
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:28475671
  title: 'Dabrafenib plus trametinib versus dabrafenib monotherapy in patients with metastatic BRAF V600E/K-mutant melanoma: long-term survival and safety analysis of a phase 3 study.'
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: Previous analysis of COMBI-d (NCT01584648) demonstrated improved progression-free survival (PFS) and overall survival (OS) with combination dabrafenib and trametinib versus dabrafenib monotherapy in BRAF V600E/K-mutant metastatic melanoma.
    supporting_text: Previous analysis of COMBI-d (NCT01584648) demonstrated improved progression-free survival (PFS) and overall survival (OS) with combination dabrafenib and trametinib versus dabrafenib monotherapy in BRAF V600E/K-mutant metastatic melanoma.
    evidence:
    - reference: PMID:28475671
      reference_title: 'Dabrafenib plus trametinib versus dabrafenib monotherapy in patients with metastatic BRAF V600E/K-mutant melanoma: long-term survival and safety analysis of a phase 3 study.'
      supports: SUPPORT
      evidence_source: OTHER
      snippet: Previous analysis of COMBI-d (NCT01584648) demonstrated improved progression-free survival (PFS) and overall survival (OS) with combination dabrafenib and trametinib versus dabrafenib monotherapy in BRAF V600E/K-mutant metastatic melanoma.
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:28501764
  title: "Open-label, multicentre safety study of vemurafenib inย 3219 patients with BRAF(V600) mutation-positive metastatic melanoma: 2-year follow-up data and long-term responders' analysis."
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: The orally available BRAF kinase inhibitor vemurafenib is an effective and tolerable treatment option for patients with metastatic melanoma harbouring BRAFV600 mutations.
    supporting_text: The orally available BRAF kinase inhibitor vemurafenib is an effective and tolerable treatment option for patients with metastatic melanoma harbouring BRAFV600 mutations.
    evidence:
    - reference: PMID:28501764
      reference_title: "Open-label, multicentre safety study of vemurafenib inย 3219 patients with BRAF(V600) mutation-positive metastatic melanoma: 2-year follow-up data and long-term responders' analysis."
      supports: SUPPORT
      evidence_source: HUMAN_CLINICAL
      snippet: The orally available BRAF kinase inhibitor vemurafenib is an effective and tolerable treatment option for patients with metastatic melanoma harbouring BRAFV600 mutations.
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:28593303
  title: Factors in Early Adolescence Associated With a Mole-Prone Phenotype in Late Adolescence.
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: '2017 Oct 1;153(10):990-998. doi: 10.1001/jamadermatol.2017.1547.'
    supporting_text: '2017 Oct 1;153(10):990-998. doi: 10.1001/jamadermatol.2017.1547.'
    evidence:
    - reference: PMID:28593303
      reference_title: Factors in Early Adolescence Associated With a Mole-Prone Phenotype in Late Adolescence.
      supports: SUPPORT
      evidence_source: HUMAN_CLINICAL
      snippet: '2017 Oct 1;153(10):990-998. doi: 10.1001/jamadermatol.2017.1547.'
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:30096703
  title: Possible immune adverse events as predictors of durable response to BRAF inhibitors in patients with BRAF V600-mutant metastatic melanoma.
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: '2018 Sep;101:229-235. doi: 10.1016/j.ejca.2018.06.030.'
    supporting_text: '2018 Sep;101:229-235. doi: 10.1016/j.ejca.2018.06.030.'
    evidence:
    - reference: PMID:30096703
      reference_title: Possible immune adverse events as predictors of durable response to BRAF inhibitors in patients with BRAF V600-mutant metastatic melanoma.
      supports: SUPPORT
      evidence_source: HUMAN_CLINICAL
      snippet: '2018 Sep;101:229-235. doi: 10.1016/j.ejca.2018.06.030.'
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:30150674
  title: Metabolic reprogramming of stromal fibroblasts by melanoma exosome microRNA favours a pre-metastatic microenvironment.
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: '2018 Aug 27;8(1):12905. doi: 10.1038/s41598-018-31323-7.'
    supporting_text: '2018 Aug 27;8(1):12905. doi: 10.1038/s41598-018-31323-7.'
    evidence:
    - reference: PMID:30150674
      reference_title: Metabolic reprogramming of stromal fibroblasts by melanoma exosome microRNA favours a pre-metastatic microenvironment.
      supports: SUPPORT
      evidence_source: OTHER
      snippet: '2018 Aug 27;8(1):12905. doi: 10.1038/s41598-018-31323-7.'
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:30238891
  title: Melanoma.
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: '2018 Sep 15;392(10151):971-984. doi: 10.1016/S0140-6736(18)31559-9.'
    supporting_text: '2018 Sep 15;392(10151):971-984. doi: 10.1016/S0140-6736(18)31559-9.'
    evidence:
    - reference: PMID:30238891
      reference_title: Melanoma.
      supports: SUPPORT
      evidence_source: HUMAN_CLINICAL
      snippet: '2018 Sep 15;392(10151):971-984. doi: 10.1016/S0140-6736(18)31559-9.'
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:30481565
  title: Metabolic targeting synergizes with MAPK inhibition and delays drug resistance in melanoma.
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: '2019 Feb 1;442:453-463. doi: 10.1016/j.canlet.2018.11.018.'
    supporting_text: '2019 Feb 1;442:453-463. doi: 10.1016/j.canlet.2018.11.018.'
    evidence:
    - reference: PMID:30481565
      reference_title: Metabolic targeting synergizes with MAPK inhibition and delays drug resistance in melanoma.
      supports: SUPPORT
      evidence_source: HUMAN_CLINICAL
      snippet: '2019 Feb 1;442:453-463. doi: 10.1016/j.canlet.2018.11.018.'
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:30739835
  title: Impact of radiation, systemic therapy and treatment sequencing on survival of patients with melanoma brain metastases.
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: Combining stereotactic radiosurgery (SRS) and active systemic therapies (STs) achieved favourable survival outcomes in patients with melanoma brain metastases (MBMs) in retrospective analyses.
    supporting_text: Combining stereotactic radiosurgery (SRS) and active systemic therapies (STs) achieved favourable survival outcomes in patients with melanoma brain metastases (MBMs) in retrospective analyses.
    evidence:
    - reference: PMID:30739835
      reference_title: Impact of radiation, systemic therapy and treatment sequencing on survival of patients with melanoma brain metastases.
      supports: SUPPORT
      evidence_source: HUMAN_CLINICAL
      snippet: Combining stereotactic radiosurgery (SRS) and active systemic therapies (STs) achieved favourable survival outcomes in patients with melanoma brain metastases (MBMs) in retrospective analyses.
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:30923800
  title: Association of Indoor Tanning Exposure With Age at Melanoma Diagnosis and BRAF V600E Mutations.
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: '2019 Nov 1;111(11):1228-1231. doi: 10.1093/jnci/djz048.'
    supporting_text: '2019 Nov 1;111(11):1228-1231. doi: 10.1093/jnci/djz048.'
    evidence:
    - reference: PMID:30923800
      reference_title: Association of Indoor Tanning Exposure With Age at Melanoma Diagnosis and BRAF V600E Mutations.
      supports: SUPPORT
      evidence_source: HUMAN_CLINICAL
      snippet: '2019 Nov 1;111(11):1228-1231. doi: 10.1093/jnci/djz048.'
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:30939167
  title: 'Panniculitis and vitiligo occurring during BRAF and MEK inhibitors combination in advanced melanoma patients: Potential predictive role of treatment efficacy.'
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: '2019 Apr 2;14(4):e0214884. doi: 10.1371/journal.pone.0214884. eCollection 2019.'
    supporting_text: '2019 Apr 2;14(4):e0214884. doi: 10.1371/journal.pone.0214884. eCollection 2019.'
    evidence:
    - reference: PMID:30939167
      reference_title: 'Panniculitis and vitiligo occurring during BRAF and MEK inhibitors combination in advanced melanoma patients: Potential predictive role of treatment efficacy.'
      supports: SUPPORT
      evidence_source: OTHER
      snippet: '2019 Apr 2;14(4):e0214884. doi: 10.1371/journal.pone.0214884. eCollection 2019.'
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:31744817
  title: A Versatile ES Cell-Based Melanoma Mouse Modeling Platform.
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: '2020 Feb 15;80(4):912-921. doi: 10.1158/0008-5472.CAN-19-2924.'
    supporting_text: '2020 Feb 15;80(4):912-921. doi: 10.1158/0008-5472.CAN-19-2924.'
    evidence:
    - reference: PMID:31744817
      reference_title: A Versatile ES Cell-Based Melanoma Mouse Modeling Platform.
      supports: SUPPORT
      evidence_source: OTHER
      snippet: '2020 Feb 15;80(4):912-921. doi: 10.1158/0008-5472.CAN-19-2924.'
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:32445930
  title: Impact of Sun Exposure and Tanning Patterns onย Next-Generation Sequencing Mutations in Melanoma.
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: For the past 30 y, the incidence rate of malignant melanoma has risen steadily.
    supporting_text: For the past 30 y, the incidence rate of malignant melanoma has risen steadily.
    evidence:
    - reference: PMID:32445930
      reference_title: Impact of Sun Exposure and Tanning Patterns onย Next-Generation Sequencing Mutations in Melanoma.
      supports: SUPPORT
      evidence_source: HUMAN_CLINICAL
      snippet: For the past 30 y, the incidence rate of malignant melanoma has risen steadily.
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:33587894
  title: 'Circulating tumour DNA in patients with advanced melanoma treated with dabrafenib or dabrafenib plus trametinib: a clinical validation study.'
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: Melanoma lacks validated blood-based biomarkers for monitoring and predicting treatment efficacy.
    supporting_text: Melanoma lacks validated blood-based biomarkers for monitoring and predicting treatment efficacy.
    evidence:
    - reference: PMID:33587894
      reference_title: 'Circulating tumour DNA in patients with advanced melanoma treated with dabrafenib or dabrafenib plus trametinib: a clinical validation study.'
      supports: SUPPORT
      evidence_source: COMPUTATIONAL
      snippet: Melanoma lacks validated blood-based biomarkers for monitoring and predicting treatment efficacy.
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:33801689
  title: 'BRAF Gene and Melanoma: Back to the Future.'
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: '2021 Mar 27;22(7):3474. doi: 10.3390/ijms22073474.'
    supporting_text: '2021 Mar 27;22(7):3474. doi: 10.3390/ijms22073474.'
    evidence:
    - reference: PMID:33801689
      reference_title: 'BRAF Gene and Melanoma: Back to the Future.'
      supports: SUPPORT
      evidence_source: OTHER
      snippet: '2021 Mar 27;22(7):3474. doi: 10.3390/ijms22073474.'
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:34064013
  title: 'Real-World Experience with Targeted Therapy in BRAF Mutant Advanced Melanoma Patients: Results from a Multicenter Retrospective Observational Study Advanced Melanoma in Russia (Experience) (ADMIRE).'
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: '2021 May 21;13(11):2529. doi: 10.3390/cancers13112529.'
    supporting_text: '2021 May 21;13(11):2529. doi: 10.3390/cancers13112529.'
    evidence:
    - reference: PMID:34064013
      reference_title: 'Real-World Experience with Targeted Therapy in BRAF Mutant Advanced Melanoma Patients: Results from a Multicenter Retrospective Observational Study Advanced Melanoma in Russia (Experience) (ADMIRE).'
      supports: SUPPORT
      evidence_source: OTHER
      snippet: '2021 May 21;13(11):2529. doi: 10.3390/cancers13112529.'
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:34108180
  title: Role of Tumor-Infiltrating B Cells in Clinical Outcome of Patients with Melanoma Treated With Dabrafenib Plus Trametinib.
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: '2021 Aug 15;27(16):4500-4510. doi: 10.1158/1078-0432.CCR-20-3586.'
    supporting_text: '2021 Aug 15;27(16):4500-4510. doi: 10.1158/1078-0432.CCR-20-3586.'
    evidence:
    - reference: PMID:34108180
      reference_title: Role of Tumor-Infiltrating B Cells in Clinical Outcome of Patients with Melanoma Treated With Dabrafenib Plus Trametinib.
      supports: SUPPORT
      evidence_source: COMPUTATIONAL
      snippet: '2021 Aug 15;27(16):4500-4510. doi: 10.1158/1078-0432.CCR-20-3586.'
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:34243078
  title: 'Efficacy, safety and factors associated with disease progression in patients with unresectable (stage III) or distant metastatic (stage IV) BRAF V600-mutant melanoma: An open label, non-randomized, phase IIIb study of trametinib in combination with dabrafenib.'
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: BRAF and MEK inhibitors combination, including dabrafenib (D) and trametinib (T) have transformed the treatment of BRAF V600-mutant advanced melanoma patients, including patients with brain metastasis (BM).
    supporting_text: BRAF and MEK inhibitors combination, including dabrafenib (D) and trametinib (T) have transformed the treatment of BRAF V600-mutant advanced melanoma patients, including patients with brain metastasis (BM).
    evidence:
    - reference: PMID:34243078
      reference_title: 'Efficacy, safety and factors associated with disease progression in patients with unresectable (stage III) or distant metastatic (stage IV) BRAF V600-mutant melanoma: An open label, non-randomized, phase IIIb study of trametinib in combination with dabrafenib.'
      supports: SUPPORT
      evidence_source: HUMAN_CLINICAL
      snippet: BRAF and MEK inhibitors combination, including dabrafenib (D) and trametinib (T) have transformed the treatment of BRAF V600-mutant advanced melanoma patients, including patients with brain metastasis (BM).
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:34246984
  title: Plasma proteome alterations by MAPK inhibitors in BRAF(V600)-mutated metastatic cutaneous melanoma.
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: '2021 Aug;23(8):783-791. doi: 10.1016/j.neo.2021.06.002.'
    supporting_text: '2021 Aug;23(8):783-791. doi: 10.1016/j.neo.2021.06.002.'
    evidence:
    - reference: PMID:34246984
      reference_title: Plasma proteome alterations by MAPK inhibitors in BRAF(V600)-mutated metastatic cutaneous melanoma.
      supports: SUPPORT
      evidence_source: COMPUTATIONAL
      snippet: '2021 Aug;23(8):783-791. doi: 10.1016/j.neo.2021.06.002.'
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:35353115
  title: Global Burden of Cutaneous Melanoma in 2020 and Projections to 2040.
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: '2022 May 1;158(5):495-503. doi: 10.1001/jamadermatol.2022.0160.'
    supporting_text: '2022 May 1;158(5):495-503. doi: 10.1001/jamadermatol.2022.0160.'
    evidence:
    - reference: PMID:35353115
      reference_title: Global Burden of Cutaneous Melanoma in 2020 and Projections to 2040.
      supports: SUPPORT
      evidence_source: OTHER
      snippet: '2022 May 1;158(5):495-503. doi: 10.1001/jamadermatol.2022.0160.'
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:35530323
  title: 'Acceptability of Drugs in the Treatment of Unresectable/Metastatic BRAF V600-Mutant Melanoma: A Systematic Review and Network Meta-Analysis.'
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: Although many novel regimens have entered the treatment paradigm for unresectable/metastatic BRAF V600-mutant melanoma, there is still a lack of head-to-head comparison in terms of security.
    supporting_text: Although many novel regimens have entered the treatment paradigm for unresectable/metastatic BRAF V600-mutant melanoma, there is still a lack of head-to-head comparison in terms of security.
    evidence:
    - reference: PMID:35530323
      reference_title: 'Acceptability of Drugs in the Treatment of Unresectable/Metastatic BRAF V600-Mutant Melanoma: A Systematic Review and Network Meta-Analysis.'
      supports: SUPPORT
      evidence_source: OTHER
      snippet: Although many novel regimens have entered the treatment paradigm for unresectable/metastatic BRAF V600-mutant melanoma, there is still a lack of head-to-head comparison in terms of security.
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:35623961
  title: 'European consensus-based interdisciplinary guideline for melanoma. Part 2: Treatment - Update 2022.'
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: '2022 Jul;170:256-284. doi: 10.1016/j.ejca.2022.04.018.'
    supporting_text: '2022 Jul;170:256-284. doi: 10.1016/j.ejca.2022.04.018.'
    evidence:
    - reference: PMID:35623961
      reference_title: 'European consensus-based interdisciplinary guideline for melanoma. Part 2: Treatment - Update 2022.'
      supports: SUPPORT
      evidence_source: OTHER
      snippet: '2022 Jul;170:256-284. doi: 10.1016/j.ejca.2022.04.018.'
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:37016119
  title: 'Comparative analysis of adjuvant therapy for stage III BRAF-mut melanoma: A real-world retrospective study from single center in China.'
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: BRAF V600 mutation is the most common oncogenic alternation in melanoma and is visible in around 50% of cutaneous and 10%-15% of acral or mucosal subtypes.
    supporting_text: BRAF V600 mutation is the most common oncogenic alternation in melanoma and is visible in around 50% of cutaneous and 10%-15% of acral or mucosal subtypes.
    evidence:
    - reference: PMID:37016119
      reference_title: 'Comparative analysis of adjuvant therapy for stage III BRAF-mut melanoma: A real-world retrospective study from single center in China.'
      supports: SUPPORT
      evidence_source: OTHER
      snippet: BRAF V600 mutation is the most common oncogenic alternation in melanoma and is visible in around 50% of cutaneous and 10%-15% of acral or mucosal subtypes.
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:37256936
  title: Gene-edited and -engineered stem cell platform drives immunotherapy for brain metastatic melanomas.
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: '2023 May 31;15(698):eade8732. doi: 10.1126/scitranslmed.ade8732.'
    supporting_text: '2023 May 31;15(698):eade8732. doi: 10.1126/scitranslmed.ade8732.'
    evidence:
    - reference: PMID:37256936
      reference_title: Gene-edited and -engineered stem cell platform drives immunotherapy for brain metastatic melanomas.
      supports: SUPPORT
      evidence_source: OTHER
      snippet: '2023 May 31;15(698):eade8732. doi: 10.1126/scitranslmed.ade8732.'
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:37920169
  title: Successes and challenges in modeling heterogeneous BRAF(V600E) mutated central nervous system neoplasms.
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: '2023 Oct 18;13:1223199. doi: 10.3389/fonc.2023.1223199. eCollection 2023.'
    supporting_text: '2023 Oct 18;13:1223199. doi: 10.3389/fonc.2023.1223199. eCollection 2023.'
    evidence:
    - reference: PMID:37920169
      reference_title: Successes and challenges in modeling heterogeneous BRAF(V600E) mutated central nervous system neoplasms.
      supports: SUPPORT
      evidence_source: OTHER
      snippet: '2023 Oct 18;13:1223199. doi: 10.3389/fonc.2023.1223199. eCollection 2023.'
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:38327091
  title: Global pannexin 1 deletion increases tumor-infiltrating lymphocytes in the BRAF/Pten mouse melanoma model.
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: '2024 Apr;18(4):969-987. doi: 10.1002/1878-0261.13596.'
    supporting_text: '2024 Apr;18(4):969-987. doi: 10.1002/1878-0261.13596.'
    evidence:
    - reference: PMID:38327091
      reference_title: Global pannexin 1 deletion increases tumor-infiltrating lymphocytes in the BRAF/Pten mouse melanoma model.
      supports: SUPPORT
      evidence_source: OTHER
      snippet: '2024 Apr;18(4):969-987. doi: 10.1002/1878-0261.13596.'
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:38972133
  title: Therapeutic implications of the metabolic changes associated with BRAF inhibition in melanoma.
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: '2024 Sep;129:102795. doi: 10.1016/j.ctrv.2024.102795.'
    supporting_text: '2024 Sep;129:102795. doi: 10.1016/j.ctrv.2024.102795.'
    evidence:
    - reference: PMID:38972133
      reference_title: Therapeutic implications of the metabolic changes associated with BRAF inhibition in melanoma.
      supports: SUPPORT
      evidence_source: OTHER
      snippet: '2024 Sep;129:102795. doi: 10.1016/j.ctrv.2024.102795.'
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:39354418
  title: 'Weekly carboplatin plus paclitaxel chemotherapy in advanced melanoma patients resistant to anti-PD-1 inhibitors: a retrospective, monocentric experience.'
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: '2024 Oct 1;24(1):1220. doi: 10.1186/s12885-024-12961-9.'
    supporting_text: '2024 Oct 1;24(1):1220. doi: 10.1186/s12885-024-12961-9.'
    evidence:
    - reference: PMID:39354418
      reference_title: 'Weekly carboplatin plus paclitaxel chemotherapy in advanced melanoma patients resistant to anti-PD-1 inhibitors: a retrospective, monocentric experience.'
      supports: SUPPORT
      evidence_source: OTHER
      snippet: '2024 Oct 1;24(1):1220. doi: 10.1186/s12885-024-12961-9.'
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:39418569
  title: 'Melanoma: Diagnosis and Treatment.'
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: Lauters R(1), Brown AD(2), Harrington KA(3).
    supporting_text: Lauters R(1), Brown AD(2), Harrington KA(3).
    evidence:
    - reference: PMID:39418569
      reference_title: 'Melanoma: Diagnosis and Treatment.'
      supports: SUPPORT
      evidence_source: HUMAN_CLINICAL
      snippet: Lauters R(1), Brown AD(2), Harrington KA(3).
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:39508497
  title: High BRAF V600 Mutation Level Associated with Worse Outcome in Metastatic Melanoma Patients Receiving BRAF and MEK Inhibitors.
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: '2024 Nov 7;104:adv40913. doi: 10.2340/actadv.v104.40913.'
    supporting_text: '2024 Nov 7;104:adv40913. doi: 10.2340/actadv.v104.40913.'
    evidence:
    - reference: PMID:39508497
      reference_title: High BRAF V600 Mutation Level Associated with Worse Outcome in Metastatic Melanoma Patients Receiving BRAF and MEK Inhibitors.
      supports: SUPPORT
      evidence_source: OTHER
      snippet: '2024 Nov 7;104:adv40913. doi: 10.2340/actadv.v104.40913.'
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:39700658
  title: 'European consensus-based interdisciplinary guideline for melanoma. Part 1: Diagnostics - Update 2024.'
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: '2025 Jan 17;215:115152. doi: 10.1016/j.ejca.2024.115152.'
    supporting_text: '2025 Jan 17;215:115152. doi: 10.1016/j.ejca.2024.115152.'
    evidence:
    - reference: PMID:39700658
      reference_title: 'European consensus-based interdisciplinary guideline for melanoma. Part 1: Diagnostics - Update 2024.'
      supports: SUPPORT
      evidence_source: OTHER
      snippet: '2025 Jan 17;215:115152. doi: 10.1016/j.ejca.2024.115152.'
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:39961465
  title: 'BRAF V600E in cancer: Exploring structural complexities, mutation profiles, and pathway dysregulation.'
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: '2025 Mar 1;446(1):114440. doi: 10.1016/j.yexcr.2025.114440.'
    supporting_text: '2025 Mar 1;446(1):114440. doi: 10.1016/j.yexcr.2025.114440.'
    evidence:
    - reference: PMID:39961465
      reference_title: 'BRAF V600E in cancer: Exploring structural complexities, mutation profiles, and pathway dysregulation.'
      supports: SUPPORT
      evidence_source: OTHER
      snippet: '2025 Mar 1;446(1):114440. doi: 10.1016/j.yexcr.2025.114440.'
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:40020669
  title: FAK inhibition combined with the RAF-MEK clamp avutometinib overcomes resistance to targeted and immune therapies in BRAF V600E melanoma.
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: '2025 Mar 10;43(3):428-445.e6. doi: 10.1016/j.ccell.2025.02.001.'
    supporting_text: '2025 Mar 10;43(3):428-445.e6. doi: 10.1016/j.ccell.2025.02.001.'
    evidence:
    - reference: PMID:40020669
      reference_title: FAK inhibition combined with the RAF-MEK clamp avutometinib overcomes resistance to targeted and immune therapies in BRAF V600E melanoma.
      supports: SUPPORT
      evidence_source: OTHER
      snippet: '2025 Mar 10;43(3):428-445.e6. doi: 10.1016/j.ccell.2025.02.001.'
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:40250457
  title: 'Clinical validation of droplet digital PCR assays in detecting BRAF(V600)-mutant circulating tumour DNA as a prognostic biomarker in patients with resected stage III melanoma receiving adjuvant therapy (COMBI-AD): a biomarker analysis from a double-blind, randomised phase 3 trial.'
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: Cell-free, circulating tumour DNA (ctDNA) is an established measure of minimal residual disease; however, it is not utilised in melanoma management.
    supporting_text: Cell-free, circulating tumour DNA (ctDNA) is an established measure of minimal residual disease; however, it is not utilised in melanoma management.
    evidence:
    - reference: PMID:40250457
      reference_title: 'Clinical validation of droplet digital PCR assays in detecting BRAF(V600)-mutant circulating tumour DNA as a prognostic biomarker in patients with resected stage III melanoma receiving adjuvant therapy (COMBI-AD): a biomarker analysis from a double-blind, randomised phase 3 trial.'
      supports: SUPPORT
      evidence_source: OTHER
      snippet: Cell-free, circulating tumour DNA (ctDNA) is an established measure of minimal residual disease; however, it is not utilised in melanoma management.
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:40411977
  title: 'Efficacy of encorafenib plus binimetinib in patients with BRAF-mutated melanoma brain metastases: Results from the Dutch Melanoma Treatment Registry.'
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: '2025 Jun 18;223:115514. doi: 10.1016/j.ejca.2025.115514.'
    supporting_text: '2025 Jun 18;223:115514. doi: 10.1016/j.ejca.2025.115514.'
    evidence:
    - reference: PMID:40411977
      reference_title: 'Efficacy of encorafenib plus binimetinib in patients with BRAF-mutated melanoma brain metastases: Results from the Dutch Melanoma Treatment Registry.'
      supports: SUPPORT
      evidence_source: OTHER
      snippet: '2025 Jun 18;223:115514. doi: 10.1016/j.ejca.2025.115514.'
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:40503961
  title: 'POLARIS: encorafenib plus binimetinib for people with BRAF V600-mutant melanoma with brain metastasis.'
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: '2025 Jul;21(16):1961-1963. doi: 10.1080/14796694.2025.2514426.'
    supporting_text: '2025 Jul;21(16):1961-1963. doi: 10.1080/14796694.2025.2514426.'
    evidence:
    - reference: PMID:40503961
      reference_title: 'POLARIS: encorafenib plus binimetinib for people with BRAF V600-mutant melanoma with brain metastasis.'
      supports: SUPPORT
      evidence_source: OTHER
      snippet: '2025 Jul;21(16):1961-1963. doi: 10.1080/14796694.2025.2514426.'
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:40643496
  title: COP1 Deficiency in BRAF(V600E) Melanomas Confers Resistance to Inhibitors of the MAPK Pathway.
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: '2025 Jun 25;14(13):975. doi: 10.3390/cells14130975.'
    supporting_text: '2025 Jun 25;14(13):975. doi: 10.3390/cells14130975.'
    evidence:
    - reference: PMID:40643496
      reference_title: COP1 Deficiency in BRAF(V600E) Melanomas Confers Resistance to Inhibitors of the MAPK Pathway.
      supports: SUPPORT
      evidence_source: OTHER
      snippet: '2025 Jun 25;14(13):975. doi: 10.3390/cells14130975.'
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:40850313
  title: 'Targeted therapy for rare BRAF-mutated melanoma: Updated multicenter analysis and launch of a publicly accessible online outcome database.'
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: '2025 Oct 1;228:115703. doi: 10.1016/j.ejca.2025.115703.'
    supporting_text: '2025 Oct 1;228:115703. doi: 10.1016/j.ejca.2025.115703.'
    evidence:
    - reference: PMID:40850313
      reference_title: 'Targeted therapy for rare BRAF-mutated melanoma: Updated multicenter analysis and launch of a publicly accessible online outcome database.'
      supports: SUPPORT
      evidence_source: OTHER
      snippet: '2025 Oct 1;228:115703. doi: 10.1016/j.ejca.2025.115703.'
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:41537702
  title: Exploratory Analysis of Biomarkers and Treatment Outcomes from the COLUMBUS Study in BRAF V600E/K-Mutant Advanced or Metastatic Melanoma.
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: The greatest benefits of encorafenib plus binimetinib were observed in patients with evidence of high TMB and/or tumor-immune infiltration.
    supporting_text: The greatest benefits of encorafenib plus binimetinib were observed in patients with evidence of high TMB and/or tumor-immune infiltration.
    evidence:
    - reference: PMID:41537702
      reference_title: Exploratory Analysis of Biomarkers and Treatment Outcomes from the COLUMBUS Study in BRAF V600E/K-Mutant Advanced or Metastatic Melanoma.
      supports: SUPPORT
      evidence_source: HUMAN_CLINICAL
      snippet: The greatest benefits of encorafenib plus binimetinib were observed in patients with evidence of high TMB and/or tumor-immune infiltration.
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
- reference: PMID:41935307
  title: PHI-501, a dual inhibitor of RAF and DDR1/2, overcomes MAPK drug resistance in Melanoma.
  found_in:
  - BRAF_V600_Mutant_Melanoma-deep-research-openscientist.md
  findings:
  - statement: Melanoma, an aggressive skin cancer caused by BRAF or NRAS mutations, is characterized by the hyperactivation of the MAPK pathway.
    supporting_text: Melanoma, an aggressive skin cancer caused by BRAF or NRAS mutations, is characterized by the hyperactivation of the MAPK pathway.
    evidence:
    - reference: PMID:41935307
      reference_title: PHI-501, a dual inhibitor of RAF and DDR1/2, overcomes MAPK drug resistance in Melanoma.
      supports: SUPPORT
      evidence_source: OTHER
      snippet: Melanoma, an aggressive skin cancer caused by BRAF or NRAS mutations, is characterized by the hyperactivation of the MAPK pathway.
      explanation: Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
๐Ÿ“š

References & Deep Research

References

85
Update on the treatment of <i>BRAF</i>mut metastatic melanoma and future perspectives
1 finding
vโ€Raf murine sarcoma viral oncogene homolog B (BRAF) mutations were first identified in melanoma in 2002, leading to increased cell division and proliferation, and resultant tumour growth.
"vโ€Raf murine sarcoma viral oncogene homolog B (BRAF) mutations were first identified in melanoma in 2002, leading to increased cell division and proliferation, and resultant tumour growth."
Show evidence (1 reference)
DOI:10.1002/jvc2.544 SUPPORT Other
"vโ€Raf murine sarcoma viral oncogene homolog B (BRAF) mutations were first identified in melanoma in 2002, leading to increased cell division and proliferation, and resultant tumour growth."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
Clinical Effectiveness of Interventions to Increase Selfโ€Surveillance in People at High Risk of Melanoma: A Systematic Review
1 finding
People at high risk of cutaneous melanoma are recommended to undertake regular skin selfโ€examination (SSE), but the effectiveness of this is uncertain.
"People at high risk of cutaneous melanoma are recommended to undertake regular skin selfโ€examination (SSE), but the effectiveness of this is uncertain."
Show evidence (1 reference)
DOI:10.1002/jvc2.70108 SUPPORT Other
"People at high risk of cutaneous melanoma are recommended to undertake regular skin selfโ€examination (SSE), but the effectiveness of this is uncertain."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
SEOM-GEM clinical guidelines for cutaneous melanoma (2023)
1 finding
Early diagnosis and treatment administration are key for increasing the chances of survival.
"Early diagnosis and treatment administration are key for increasing the chances of survival."
Show evidence (1 reference)
DOI:10.1007/s12094-024-03497-2 SUPPORT Human Clinical
"Early diagnosis and treatment administration are key for increasing the chances of survival."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
BRAFV600E Metastatic Melanoma Journey: A Perspective from a Patient and his Oncologist
1 finding
BRAFV600E Metastatic Melanoma Journey: A Perspective from a Patient and his Oncologist
"BRAFV600E Metastatic Melanoma Journey: A Perspective from a Patient and his Oncologist"
Targeting BRAF in an Inducible Murine Model of Melanoma
1 finding
Targeting BRAF in an Inducible Murine Model of Melanoma
"Targeting BRAF in an Inducible Murine Model of Melanoma"
Dabrafenib plus trametinib versus anti-PD-1 monotherapy as adjuvant therapy in BRAF V600-mutant stage III melanoma after definitive surgery: a multicenter, retrospective cohort study
1 finding
Dabrafenib plus trametinib versus anti-PD-1 monotherapy as adjuvant therapy in BRAF V600-mutant stage III melanoma after definitive surgery: a multicenter, retrospective cohort study
"Dabrafenib plus trametinib versus anti-PD-1 monotherapy as adjuvant therapy in BRAF V600-mutant stage III melanoma after definitive surgery: a multicenter, retrospective cohort study"
Sequential immunotherapy and targeted therapy for metastatic BRAF V600 mutated melanoma: 4-year survival and biomarkers evaluation from the phase II SECOMBIT trial
1 finding
Sequential immunotherapy and targeted therapy for metastatic BRAF V600 mutated melanoma: 4-year survival and biomarkers evaluation from the phase II SECOMBIT trial
"No prospective data were available prior to 2021 to inform selection between combination BRAF and MEK inhibition versus dual blockade of programmed cell death protein-1 (PD-1) and cytotoxic T lymphocyte antigen-4 (CTLA-4) as first-line treatment options for BRAFV600-mutant melanoma."
Show evidence (1 reference)
DOI:10.1038/s41467-023-44475-6 SUPPORT Human Clinical
"No prospective data were available prior to 2021 to inform selection between combination BRAF and MEK inhibition versus dual blockade of programmed cell death protein-1 (PD-1) and cytotoxic T lymphocyte antigen-4 (CTLA-4) as first-line treatment options for BRAFV600-mutant melanoma."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
Neoadjuvant pembrolizumab, dabrafenib and trametinib in BRAFV600-mutant resectable melanoma: the randomized phase 2 NeoTrio trial
1 finding
Immune checkpoint inhibitors and BRAF-targeted therapy each improve survival in melanoma.
"Immune checkpoint inhibitors and BRAF-targeted therapy each improve survival in melanoma."
Show evidence (1 reference)
DOI:10.1038/s41591-024-03077-5 SUPPORT Human Clinical
"Immune checkpoint inhibitors and BRAF-targeted therapy each improve survival in melanoma."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
Sequencing of Checkpoint or BRAF/MEK Inhibitors on Brain Metastases in Melanoma
1 finding
Sequencing of Checkpoint or BRAF/MEK Inhibitors on Brain Metastases in Melanoma
"Sequencing of Checkpoint or BRAF/MEK Inhibitors on Brain Metastases in Melanoma"
Healthcare resource utilization in patients with metastatic melanoma receiving first-line therapy with dabrafenibโ€‰+โ€‰trametinib versus nivolumab or pembrolizumab monotherapy
1 finding
Healthcare resource utilization in patients with metastatic melanoma receiving first-line therapy with dabrafenibโ€‰+โ€‰trametinib versus nivolumab or pembrolizumab monotherapy
"Healthcare resource utilization in patients with metastatic melanoma receiving first-line therapy with dabrafenibโ€‰+โ€‰trametinib versus nivolumab or pembrolizumab monotherapy"
Use of extracellular vesicles from lymphatic drainage as surrogate markers of melanoma progression and <i>BRAF</i> <i>V600E</i> mutation
1 finding
Liquid biopsies from cancer patients have the potential to improve diagnosis and prognosis.
"Liquid biopsies from cancer patients have the potential to improve diagnosis and prognosis."
Show evidence (1 reference)
DOI:10.1084/jem.20181522 SUPPORT Human Clinical
"Liquid biopsies from cancer patients have the potential to improve diagnosis and prognosis."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
Exploratory Analysis of Biomarkers and Treatment Outcomes from the COLUMBUS Study in BRAF V600E/Kโ€“Mutant Advanced or Metastatic Melanoma
1 finding
Treatment with encorafenib ยฑ binimetinib is associated with improved survival versus vemurafenib in patients with BRAF V600E/Kโ€“mutant advanced melanoma.
"Treatment with encorafenib ยฑ binimetinib is associated with improved survival versus vemurafenib in patients with BRAF V600E/Kโ€“mutant advanced melanoma."
Show evidence (1 reference)
DOI:10.1158/1078-0432.ccr-25-3262 SUPPORT Human Clinical
"Treatment with encorafenib ยฑ binimetinib is associated with improved survival versus vemurafenib in patients with BRAF V600E/Kโ€“mutant advanced melanoma."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
Cutaneous Oncology: Strategies for Melanoma Prevention, Diagnosis, and Therapy
1 finding
Skin cancer comprises one-third of all diagnosed cancer cases and remains a major health concern.
"Skin cancer comprises one-third of all diagnosed cancer cases and remains a major health concern."
Show evidence (1 reference)
"Skin cancer comprises one-third of all diagnosed cancer cases and remains a major health concern."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
BRAF inhibitor resistance in melanoma: from resistance mechanisms to therapeutic innovations
1 finding
BRAF inhibitors (BRAFi) have transformed the treatment of BRAF mutant melanoma, but inherent and acquired resistance remains a major barrier to curative outcomes.
"BRAF inhibitors (BRAFi) have transformed the treatment of BRAF mutant melanoma, but inherent and acquired resistance remains a major barrier to curative outcomes."
Show evidence (1 reference)
"BRAF inhibitors (BRAFi) have transformed the treatment of BRAF mutant melanoma, but inherent and acquired resistance remains a major barrier to curative outcomes."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
Trends in melanoma in the elderly in Denmark, 1980โ€“2012
1 finding
Trends in melanoma in the elderly in Denmark, 1980โ€“2012
"Trends in melanoma in the elderly in Denmark, 1980โ€“2012"
The evolution of BRAF-targeted therapies in melanoma: overcoming hurdles and unleashing novel strategies
1 finding
Melanoma, a highly aggressive form of skin cancer, poses a significant global health burden, with 331,647 new cases and 58,645 deaths reported in 2022.
"Melanoma, a highly aggressive form of skin cancer, poses a significant global health burden, with 331,647 new cases and 58,645 deaths reported in 2022."
Show evidence (1 reference)
DOI:10.3389/fonc.2024.1504142 SUPPORT Human Clinical
"Melanoma, a highly aggressive form of skin cancer, poses a significant global health burden, with 331,647 new cases and 58,645 deaths reported in 2022."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
BRAF V600-Mutated Metastatic Melanoma and Targeted Therapy Resistance: An Update of the Current Knowledge
1 finding
Melanoma is the most common cause of death in skin cancer due to its high metastatic potential.
"Melanoma is the most common cause of death in skin cancer due to its high metastatic potential."
Show evidence (1 reference)
DOI:10.3390/cancers15092607 SUPPORT Human Clinical
"Melanoma is the most common cause of death in skin cancer due to its high metastatic potential."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
BRAF Mutations in Melanoma: Biological Aspects, Therapeutic Implications, and Circulating Biomarkers
1 finding
Melanoma is an aggressive form of skin cancer resulting from the malignant transformation of melanocytes.
"Melanoma is an aggressive form of skin cancer resulting from the malignant transformation of melanocytes."
Show evidence (1 reference)
DOI:10.3390/cancers15164026 SUPPORT Human Clinical
"Melanoma is an aggressive form of skin cancer resulting from the malignant transformation of melanocytes."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
New Screening Methods in Melanoma
1 finding
The World Health Organisation reports that melanoma had an incidence of 331,722 cases worldwide in 2022, ranking it 17th on the list of the most prevalent malignancies.
"The World Health Organisation reports that melanoma had an incidence of 331,722 cases worldwide in 2022, ranking it 17th on the list of the most prevalent malignancies."
Show evidence (1 reference)
DOI:10.3390/cancers16244186 SUPPORT Computational
"The World Health Organisation reports that melanoma had an incidence of 331,722 cases worldwide in 2022, ranking it 17th on the list of the most prevalent malignancies."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
Skin Photodamage and Melanomagenesis: A Comprehensive Review
1 finding
Melanoma, the most aggressive form of skin cancer, still represents a significant and growing public health concern.
"Melanoma, the most aggressive form of skin cancer, still represents a significant and growing public health concern."
Show evidence (1 reference)
DOI:10.3390/cancers17111784 SUPPORT Human Clinical
"Melanoma, the most aggressive form of skin cancer, still represents a significant and growing public health concern."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
Treatment-Related Adverse Events in Individuals with BRAF-Mutant Cutaneous Melanoma Treated with BRAF and MEK Inhibitors: A Systematic Review and Meta-Analysis
1 finding
Treatment-Related Adverse Events in Individuals with BRAF-Mutant Cutaneous Melanoma Treated with BRAF and MEK Inhibitors: A Systematic Review and Meta-Analysis
"We conducted a systematic review of clinical trials and case reports analyzing the safety of the currently approved BRAF and MEK inhibitors in adults with cutaneous melanoma (CM), and a meta-analysis to estimate the pooled prevalence of treatment-related adverse events (TRAEs)."
Show evidence (1 reference)
"We conducted a systematic review of clinical trials and case reports analyzing the safety of the currently approved BRAF and MEK inhibitors in adults with cutaneous melanoma (CM), and a meta-analysis to estimate the pooled prevalence of treatment-related adverse events (TRAEs)."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
From Tank to Treatment: Modeling Melanoma in Zebrafish
1 finding
Melanoma is the deadliest form of skin cancer and one of few cancers with a growing incidence.
"Melanoma is the deadliest form of skin cancer and one of few cancers with a growing incidence."
Show evidence (1 reference)
DOI:10.3390/cells9051289 SUPPORT Model Organism
"Melanoma is the deadliest form of skin cancer and one of few cancers with a growing incidence."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
Braf-Mutant Melanomas: Biology and Therapy
1 finding
The incidence of melanoma, the most lethal form of skin cancer, has increased mainly due to ultraviolet exposure.
"The incidence of melanoma, the most lethal form of skin cancer, has increased mainly due to ultraviolet exposure."
Show evidence (1 reference)
DOI:10.3390/curroncol31120568 SUPPORT Human Clinical
"The incidence of melanoma, the most lethal form of skin cancer, has increased mainly due to ultraviolet exposure."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
Primary Cutaneous Melanomaโ€”Management in 2024
1 finding
Maximizing survival for patients with primary cutaneous melanomas (melanomas) depends on an early diagnosis and appropriate management.
"Maximizing survival for patients with primary cutaneous melanomas (melanomas) depends on an early diagnosis and appropriate management."
Show evidence (1 reference)
DOI:10.3390/jcm13061607 SUPPORT Human Clinical
"Maximizing survival for patients with primary cutaneous melanomas (melanomas) depends on an early diagnosis and appropriate management."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
Molecular Basis of BRAF Inhibitor Resistance in Melanoma: A Systematic Review
1 finding
Melanoma, the deadliest human skin cancer, frequently harbors activating BRAF mutations, with V600E being the most prevalent.
"Melanoma, the deadliest human skin cancer, frequently harbors activating BRAF mutations, with V600E being the most prevalent."
Show evidence (1 reference)
DOI:10.3390/ph18081235 SUPPORT Other
"Melanoma, the deadliest human skin cancer, frequently harbors activating BRAF mutations, with V600E being the most prevalent."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
[Early diagnosis of skin cancer].
1 finding
Survival from melanoma is strongly related to tumour thickness.
"Survival from melanoma is strongly related to tumour thickness."
Show evidence (1 reference)
PMID:20806172 SUPPORT Human Clinical
"Survival from melanoma is strongly related to tumour thickness."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
Thinking about the role (largely ignored) of heavy metals in cancer prevention: hexavalent chromium and melanoma as a case in point.
1 finding
2011;188:65-74. doi: 10.1007/978-3-642-10858-7_5.
"2011;188:65-74. doi: 10.1007/978-3-642-10858-7_5."
Show evidence (1 reference)
PMID:21253789 SUPPORT Human Clinical
"2011;188:65-74. doi: 10.1007/978-3-642-10858-7_5."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
Routine multiplex mutational profiling of melanomas enables enrollment in genotype-driven therapeutic trials.
1 finding
2012;7(4):e35309. doi: 10.1371/journal.pone.0035309.
"2012;7(4):e35309. doi: 10.1371/journal.pone.0035309."
Show evidence (1 reference)
PMID:22536370 SUPPORT Other
"2012;7(4):e35309. doi: 10.1371/journal.pone.0035309."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
Inactivation of the HIF-1ฮฑ/PDK3 signaling axis drives melanoma toward mitochondrial oxidative metabolism and potentiates the therapeutic activity of pro-oxidants.
1 finding
2012 Oct 1;72(19):5035-47. doi: 10.1158/0008-5472.CAN-12-0979.
"2012 Oct 1;72(19):5035-47. doi: 10.1158/0008-5472.CAN-12-0979."
Show evidence (1 reference)
PMID:22865452 SUPPORT Human Clinical
"2012 Oct 1;72(19):5035-47. doi: 10.1158/0008-5472.CAN-12-0979."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
Pharmacodynamic effects and mechanisms of resistance to vemurafenib in patients with metastatic melanoma.
1 finding
2013 May 10;31(14):1767-74. doi: 10.1200/JCO.2012.44.7888.
"2013 May 10;31(14):1767-74. doi: 10.1200/JCO.2012.44.7888."
Show evidence (1 reference)
PMID:23569304 SUPPORT Human Clinical
"2013 May 10;31(14):1767-74. doi: 10.1200/JCO.2012.44.7888."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
Improvement of the quality of BRAF testing in melanomas with nationwide external quality assessment, for the BRAF EQA group.
1 finding
Knowledge about tumour gene mutation status is essential for the treatment of increasing numbers of cancer patients, and testing quality has a major impact on treatment response and cost.
"Knowledge about tumour gene mutation status is essential for the treatment of increasing numbers of cancer patients, and testing quality has a major impact on treatment response and cost."
Show evidence (1 reference)
PMID:24119386 SUPPORT Human Clinical
"Knowledge about tumour gene mutation status is essential for the treatment of increasing numbers of cancer patients, and testing quality has a major impact on treatment response and cost."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
The genetic heterogeneity and mutational burden of engineered melanomas in zebrafish models.
1 finding
Melanoma is the most deadly form of skin cancer.
"Melanoma is the most deadly form of skin cancer."
Show evidence (1 reference)
PMID:24148783 SUPPORT Model Organism
"Melanoma is the most deadly form of skin cancer."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
Characterization of vemurafenib phototoxicity in a mouse model.
1 finding
2014 Jan;137(1):259-67. doi: 10.1093/toxsci/kft237.
"2014 Jan;137(1):259-67. doi: 10.1093/toxsci/kft237."
Show evidence (1 reference)
PMID:24154489 SUPPORT Model Organism
"2014 Jan;137(1):259-67. doi: 10.1093/toxsci/kft237."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
Analysis of the B-RafV600E mutation in cutaneous melanoma patients with occupational sun exposure.
1 finding
2014 Mar;31(3):1079-82. doi: 10.3892/or.2014.2977.
"2014 Mar;31(3):1079-82. doi: 10.3892/or.2014.2977."
Show evidence (1 reference)
PMID:24424406 SUPPORT Human Clinical
"2014 Mar;31(3):1079-82. doi: 10.3892/or.2014.2977."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
Molecular pathways: BRAF induces bioenergetic adaptation by attenuating oxidative phosphorylation.
1 finding
2014 May 1;20(9):2257-63. doi: 10.1158/1078-0432.CCR-13-0898.
"2014 May 1;20(9):2257-63. doi: 10.1158/1078-0432.CCR-13-0898."
Show evidence (1 reference)
PMID:24610826 SUPPORT Other
"2014 May 1;20(9):2257-63. doi: 10.1158/1078-0432.CCR-13-0898."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
BRAF pyrosequencing analysis aided by a lookup table.
1 finding
2014 May;141(5):639-47. doi: 10.1309/AJCPVWH1K2ZIHHTV.
"2014 May;141(5):639-47. doi: 10.1309/AJCPVWH1K2ZIHHTV."
Show evidence (1 reference)
PMID:24713734 SUPPORT Computational
"2014 May;141(5):639-47. doi: 10.1309/AJCPVWH1K2ZIHHTV."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
Response to BRAF inhibition in melanoma is enhanced when combined with immune checkpoint blockade.
1 finding
2014 Jul;2(7):643-54. doi: 10.1158/2326-6066.CIR-13-0215.
"2014 Jul;2(7):643-54. doi: 10.1158/2326-6066.CIR-13-0215."
Show evidence (1 reference)
PMID:24903021 SUPPORT Other
"2014 Jul;2(7):643-54. doi: 10.1158/2326-6066.CIR-13-0215."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
Association between BRAFV600E and NRASQ61R mutations and clinicopathologic characteristics, risk factors and clinical outcome of primary invasive cutaneous melanoma.
1 finding
2014 Oct;25(10):1379-86. doi: 10.1007/s10552-014-0443-x.
"2014 Oct;25(10):1379-86. doi: 10.1007/s10552-014-0443-x."
Show evidence (1 reference)
PMID:25048604 SUPPORT Other
"2014 Oct;25(10):1379-86. doi: 10.1007/s10552-014-0443-x."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
Skin cancer prevention campaign aimed at beachgoers on the Costa del Sol (southern Spain).
1 finding
Sunbathing on the beach is one of the main risks for skin cancer.
"Sunbathing on the beach is one of the main risks for skin cancer."
Show evidence (1 reference)
PMID:25069660 SUPPORT Human Clinical
"Sunbathing on the beach is one of the main risks for skin cancer."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
Clinicopathological characteristics and mutation profiling in primary cutaneous melanoma.
1 finding
The incidence of mutations in malignant melanoma varies remarkably according to the subtype of melanoma, and this in itself is affected by racial and geographical factors.
"The incidence of mutations in malignant melanoma varies remarkably according to the subtype of melanoma, and this in itself is affected by racial and geographical factors."
Show evidence (1 reference)
PMID:25357015 SUPPORT Human Clinical
"The incidence of mutations in malignant melanoma varies remarkably according to the subtype of melanoma, and this in itself is affected by racial and geographical factors."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
Lymph node metastases of melanoma: challenges for BRAF mutation detection.
1 finding
2015 Jan;46(1):113-9. doi: 10.1016/j.humpath.2014.09.014.
"2015 Jan;46(1):113-9. doi: 10.1016/j.humpath.2014.09.014."
Show evidence (1 reference)
PMID:25456393 SUPPORT Computational
"2015 Jan;46(1):113-9. doi: 10.1016/j.humpath.2014.09.014."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
Contribution of Beta-HPV Infection and UV Damage to Rapid-Onset Cutaneous Squamous Cell Carcinoma during BRAF-Inhibition Therapy.
1 finding
2015 Jun 1;21(11):2624-34. doi: 10.1158/1078-0432.CCR-14-2667.
"2015 Jun 1;21(11):2624-34. doi: 10.1158/1078-0432.CCR-14-2667."
Show evidence (1 reference)
PMID:25724524 SUPPORT Other
"2015 Jun 1;21(11):2624-34. doi: 10.1158/1078-0432.CCR-14-2667."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
Nephrotoxicity of the BRAF Inhibitors Vemurafenib and Dabrafenib.
1 finding
2015 Nov;1(8):1133-4. doi: 10.1001/jamaoncol.2015.1713.
"2015 Nov;1(8):1133-4. doi: 10.1001/jamaoncol.2015.1713."
Show evidence (1 reference)
PMID:26182194 SUPPORT Human Clinical
"2015 Nov;1(8):1133-4. doi: 10.1001/jamaoncol.2015.1713."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
Multicenter Evaluation of a Novel Automated Rapid Detection System of BRAF Status in Formalin-Fixed, Paraffin-Embedded Tissues.
1 finding
2016 May;18(3):370-377. doi: 10.1016/j.jmoldx.2015.12.005.
"2016 May;18(3):370-377. doi: 10.1016/j.jmoldx.2015.12.005."
Show evidence (1 reference)
PMID:26921540 SUPPORT Human Clinical
"2016 May;18(3):370-377. doi: 10.1016/j.jmoldx.2015.12.005."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
[The effect of solar ultraviolet radiation (UVR) on induction of skin cancers].
1 finding
BRAF gene mutations were observed in ~50% of CMM cases.
"BRAF gene mutations were observed in ~50% of CMM cases."
Show evidence (1 reference)
PMID:27221301 SUPPORT Human Clinical
"BRAF gene mutations were observed in ~50% of CMM cases."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
BRAF V600 mutation detection in melanoma: a comparison of two laboratory testing methods.
1 finding
2017 Nov;70(11):935-940. doi: 10.1136/jclinpath-2017-204367.
"2017 Nov;70(11):935-940. doi: 10.1136/jclinpath-2017-204367."
Show evidence (1 reference)
PMID:28424234 SUPPORT Other
"2017 Nov;70(11):935-940. doi: 10.1136/jclinpath-2017-204367."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
Dabrafenib plus trametinib versus dabrafenib monotherapy in patients with metastatic BRAF V600E/K-mutant melanoma: long-term survival and safety analysis of a phase 3 study.
1 finding
Previous analysis of COMBI-d (NCT01584648) demonstrated improved progression-free survival (PFS) and overall survival (OS) with combination dabrafenib and trametinib versus dabrafenib monotherapy in BRAF V600E/K-mutant metastatic melanoma.
"Previous analysis of COMBI-d (NCT01584648) demonstrated improved progression-free survival (PFS) and overall survival (OS) with combination dabrafenib and trametinib versus dabrafenib monotherapy in BRAF V600E/K-mutant metastatic melanoma."
Show evidence (1 reference)
PMID:28475671 SUPPORT Other
"Previous analysis of COMBI-d (NCT01584648) demonstrated improved progression-free survival (PFS) and overall survival (OS) with combination dabrafenib and trametinib versus dabrafenib monotherapy in BRAF V600E/K-mutant metastatic melanoma."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
Open-label, multicentre safety study of vemurafenib inย 3219 patients with BRAF(V600) mutation-positive metastatic melanoma: 2-year follow-up data and long-term responders' analysis.
1 finding
The orally available BRAF kinase inhibitor vemurafenib is an effective and tolerable treatment option for patients with metastatic melanoma harbouring BRAFV600 mutations.
"The orally available BRAF kinase inhibitor vemurafenib is an effective and tolerable treatment option for patients with metastatic melanoma harbouring BRAFV600 mutations."
Show evidence (1 reference)
PMID:28501764 SUPPORT Human Clinical
"The orally available BRAF kinase inhibitor vemurafenib is an effective and tolerable treatment option for patients with metastatic melanoma harbouring BRAFV600 mutations."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
Factors in Early Adolescence Associated With a Mole-Prone Phenotype in Late Adolescence.
1 finding
2017 Oct 1;153(10):990-998. doi: 10.1001/jamadermatol.2017.1547.
"2017 Oct 1;153(10):990-998. doi: 10.1001/jamadermatol.2017.1547."
Show evidence (1 reference)
PMID:28593303 SUPPORT Human Clinical
"2017 Oct 1;153(10):990-998. doi: 10.1001/jamadermatol.2017.1547."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
Possible immune adverse events as predictors of durable response to BRAF inhibitors in patients with BRAF V600-mutant metastatic melanoma.
1 finding
2018 Sep;101:229-235. doi: 10.1016/j.ejca.2018.06.030.
"2018 Sep;101:229-235. doi: 10.1016/j.ejca.2018.06.030."
Show evidence (1 reference)
PMID:30096703 SUPPORT Human Clinical
"2018 Sep;101:229-235. doi: 10.1016/j.ejca.2018.06.030."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
Metabolic reprogramming of stromal fibroblasts by melanoma exosome microRNA favours a pre-metastatic microenvironment.
1 finding
2018 Aug 27;8(1):12905. doi: 10.1038/s41598-018-31323-7.
"2018 Aug 27;8(1):12905. doi: 10.1038/s41598-018-31323-7."
Show evidence (1 reference)
PMID:30150674 SUPPORT Other
"2018 Aug 27;8(1):12905. doi: 10.1038/s41598-018-31323-7."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
Melanoma.
1 finding
2018 Sep 15;392(10151):971-984. doi: 10.1016/S0140-6736(18)31559-9.
"2018 Sep 15;392(10151):971-984. doi: 10.1016/S0140-6736(18)31559-9."
Show evidence (1 reference)
PMID:30238891 SUPPORT Human Clinical
"2018 Sep 15;392(10151):971-984. doi: 10.1016/S0140-6736(18)31559-9."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
Metabolic targeting synergizes with MAPK inhibition and delays drug resistance in melanoma.
1 finding
2019 Feb 1;442:453-463. doi: 10.1016/j.canlet.2018.11.018.
"2019 Feb 1;442:453-463. doi: 10.1016/j.canlet.2018.11.018."
Show evidence (1 reference)
PMID:30481565 SUPPORT Human Clinical
"2019 Feb 1;442:453-463. doi: 10.1016/j.canlet.2018.11.018."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
Impact of radiation, systemic therapy and treatment sequencing on survival of patients with melanoma brain metastases.
1 finding
Combining stereotactic radiosurgery (SRS) and active systemic therapies (STs) achieved favourable survival outcomes in patients with melanoma brain metastases (MBMs) in retrospective analyses.
"Combining stereotactic radiosurgery (SRS) and active systemic therapies (STs) achieved favourable survival outcomes in patients with melanoma brain metastases (MBMs) in retrospective analyses."
Show evidence (1 reference)
PMID:30739835 SUPPORT Human Clinical
"Combining stereotactic radiosurgery (SRS) and active systemic therapies (STs) achieved favourable survival outcomes in patients with melanoma brain metastases (MBMs) in retrospective analyses."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
Association of Indoor Tanning Exposure With Age at Melanoma Diagnosis and BRAF V600E Mutations.
1 finding
2019 Nov 1;111(11):1228-1231. doi: 10.1093/jnci/djz048.
"2019 Nov 1;111(11):1228-1231. doi: 10.1093/jnci/djz048."
Show evidence (1 reference)
PMID:30923800 SUPPORT Human Clinical
"2019 Nov 1;111(11):1228-1231. doi: 10.1093/jnci/djz048."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
Panniculitis and vitiligo occurring during BRAF and MEK inhibitors combination in advanced melanoma patients: Potential predictive role of treatment efficacy.
1 finding
2019 Apr 2;14(4):e0214884. doi: 10.1371/journal.pone.0214884. eCollection 2019.
"2019 Apr 2;14(4):e0214884. doi: 10.1371/journal.pone.0214884. eCollection 2019."
Show evidence (1 reference)
PMID:30939167 SUPPORT Other
"2019 Apr 2;14(4):e0214884. doi: 10.1371/journal.pone.0214884. eCollection 2019."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
A Versatile ES Cell-Based Melanoma Mouse Modeling Platform.
1 finding
2020 Feb 15;80(4):912-921. doi: 10.1158/0008-5472.CAN-19-2924.
"2020 Feb 15;80(4):912-921. doi: 10.1158/0008-5472.CAN-19-2924."
Show evidence (1 reference)
PMID:31744817 SUPPORT Other
"2020 Feb 15;80(4):912-921. doi: 10.1158/0008-5472.CAN-19-2924."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
Impact of Sun Exposure and Tanning Patterns onย Next-Generation Sequencing Mutations in Melanoma.
1 finding
For the past 30 y, the incidence rate of malignant melanoma has risen steadily.
"For the past 30 y, the incidence rate of malignant melanoma has risen steadily."
Show evidence (1 reference)
PMID:32445930 SUPPORT Human Clinical
"For the past 30 y, the incidence rate of malignant melanoma has risen steadily."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
Circulating tumour DNA in patients with advanced melanoma treated with dabrafenib or dabrafenib plus trametinib: a clinical validation study.
1 finding
Melanoma lacks validated blood-based biomarkers for monitoring and predicting treatment efficacy.
"Melanoma lacks validated blood-based biomarkers for monitoring and predicting treatment efficacy."
Show evidence (1 reference)
PMID:33587894 SUPPORT Computational
"Melanoma lacks validated blood-based biomarkers for monitoring and predicting treatment efficacy."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
BRAF Gene and Melanoma: Back to the Future.
1 finding
2021 Mar 27;22(7):3474. doi: 10.3390/ijms22073474.
"2021 Mar 27;22(7):3474. doi: 10.3390/ijms22073474."
Show evidence (1 reference)
PMID:33801689 SUPPORT Other
"2021 Mar 27;22(7):3474. doi: 10.3390/ijms22073474."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
Real-World Experience with Targeted Therapy in BRAF Mutant Advanced Melanoma Patients: Results from a Multicenter Retrospective Observational Study Advanced Melanoma in Russia (Experience) (ADMIRE).
1 finding
2021 May 21;13(11):2529. doi: 10.3390/cancers13112529.
"2021 May 21;13(11):2529. doi: 10.3390/cancers13112529."
Show evidence (1 reference)
PMID:34064013 SUPPORT Other
"2021 May 21;13(11):2529. doi: 10.3390/cancers13112529."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
Role of Tumor-Infiltrating B Cells in Clinical Outcome of Patients with Melanoma Treated With Dabrafenib Plus Trametinib.
1 finding
2021 Aug 15;27(16):4500-4510. doi: 10.1158/1078-0432.CCR-20-3586.
"2021 Aug 15;27(16):4500-4510. doi: 10.1158/1078-0432.CCR-20-3586."
Show evidence (1 reference)
PMID:34108180 SUPPORT Computational
"2021 Aug 15;27(16):4500-4510. doi: 10.1158/1078-0432.CCR-20-3586."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
Efficacy, safety and factors associated with disease progression in patients with unresectable (stage III) or distant metastatic (stage IV) BRAF V600-mutant melanoma: An open label, non-randomized, phase IIIb study of trametinib in combination with dabrafenib.
1 finding
BRAF and MEK inhibitors combination, including dabrafenib (D) and trametinib (T) have transformed the treatment of BRAF V600-mutant advanced melanoma patients, including patients with brain metastasis (BM).
"BRAF and MEK inhibitors combination, including dabrafenib (D) and trametinib (T) have transformed the treatment of BRAF V600-mutant advanced melanoma patients, including patients with brain metastasis (BM)."
Show evidence (1 reference)
PMID:34243078 SUPPORT Human Clinical
"BRAF and MEK inhibitors combination, including dabrafenib (D) and trametinib (T) have transformed the treatment of BRAF V600-mutant advanced melanoma patients, including patients with brain metastasis (BM)."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
Plasma proteome alterations by MAPK inhibitors in BRAF(V600)-mutated metastatic cutaneous melanoma.
1 finding
2021 Aug;23(8):783-791. doi: 10.1016/j.neo.2021.06.002.
"2021 Aug;23(8):783-791. doi: 10.1016/j.neo.2021.06.002."
Show evidence (1 reference)
PMID:34246984 SUPPORT Computational
"2021 Aug;23(8):783-791. doi: 10.1016/j.neo.2021.06.002."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
Global Burden of Cutaneous Melanoma in 2020 and Projections to 2040.
1 finding
2022 May 1;158(5):495-503. doi: 10.1001/jamadermatol.2022.0160.
"2022 May 1;158(5):495-503. doi: 10.1001/jamadermatol.2022.0160."
Show evidence (1 reference)
PMID:35353115 SUPPORT Other
"2022 May 1;158(5):495-503. doi: 10.1001/jamadermatol.2022.0160."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
Acceptability of Drugs in the Treatment of Unresectable/Metastatic BRAF V600-Mutant Melanoma: A Systematic Review and Network Meta-Analysis.
1 finding
Although many novel regimens have entered the treatment paradigm for unresectable/metastatic BRAF V600-mutant melanoma, there is still a lack of head-to-head comparison in terms of security.
"Although many novel regimens have entered the treatment paradigm for unresectable/metastatic BRAF V600-mutant melanoma, there is still a lack of head-to-head comparison in terms of security."
Show evidence (1 reference)
PMID:35530323 SUPPORT Other
"Although many novel regimens have entered the treatment paradigm for unresectable/metastatic BRAF V600-mutant melanoma, there is still a lack of head-to-head comparison in terms of security."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
European consensus-based interdisciplinary guideline for melanoma. Part 2: Treatment - Update 2022.
1 finding
2022 Jul;170:256-284. doi: 10.1016/j.ejca.2022.04.018.
"2022 Jul;170:256-284. doi: 10.1016/j.ejca.2022.04.018."
Show evidence (1 reference)
PMID:35623961 SUPPORT Other
"2022 Jul;170:256-284. doi: 10.1016/j.ejca.2022.04.018."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
Comparative analysis of adjuvant therapy for stage III BRAF-mut melanoma: A real-world retrospective study from single center in China.
1 finding
BRAF V600 mutation is the most common oncogenic alternation in melanoma and is visible in around 50% of cutaneous and 10%-15% of acral or mucosal subtypes.
"BRAF V600 mutation is the most common oncogenic alternation in melanoma and is visible in around 50% of cutaneous and 10%-15% of acral or mucosal subtypes."
Show evidence (1 reference)
PMID:37016119 SUPPORT Other
"BRAF V600 mutation is the most common oncogenic alternation in melanoma and is visible in around 50% of cutaneous and 10%-15% of acral or mucosal subtypes."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
Gene-edited and -engineered stem cell platform drives immunotherapy for brain metastatic melanomas.
1 finding
2023 May 31;15(698):eade8732. doi: 10.1126/scitranslmed.ade8732.
"2023 May 31;15(698):eade8732. doi: 10.1126/scitranslmed.ade8732."
Show evidence (1 reference)
PMID:37256936 SUPPORT Other
"2023 May 31;15(698):eade8732. doi: 10.1126/scitranslmed.ade8732."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
Successes and challenges in modeling heterogeneous BRAF(V600E) mutated central nervous system neoplasms.
1 finding
2023 Oct 18;13:1223199. doi: 10.3389/fonc.2023.1223199. eCollection 2023.
"2023 Oct 18;13:1223199. doi: 10.3389/fonc.2023.1223199. eCollection 2023."
Show evidence (1 reference)
PMID:37920169 SUPPORT Other
"2023 Oct 18;13:1223199. doi: 10.3389/fonc.2023.1223199. eCollection 2023."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
Global pannexin 1 deletion increases tumor-infiltrating lymphocytes in the BRAF/Pten mouse melanoma model.
1 finding
2024 Apr;18(4):969-987. doi: 10.1002/1878-0261.13596.
"2024 Apr;18(4):969-987. doi: 10.1002/1878-0261.13596."
Show evidence (1 reference)
PMID:38327091 SUPPORT Other
"2024 Apr;18(4):969-987. doi: 10.1002/1878-0261.13596."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
Therapeutic implications of the metabolic changes associated with BRAF inhibition in melanoma.
1 finding
2024 Sep;129:102795. doi: 10.1016/j.ctrv.2024.102795.
"2024 Sep;129:102795. doi: 10.1016/j.ctrv.2024.102795."
Show evidence (1 reference)
PMID:38972133 SUPPORT Other
"2024 Sep;129:102795. doi: 10.1016/j.ctrv.2024.102795."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
Weekly carboplatin plus paclitaxel chemotherapy in advanced melanoma patients resistant to anti-PD-1 inhibitors: a retrospective, monocentric experience.
1 finding
2024 Oct 1;24(1):1220. doi: 10.1186/s12885-024-12961-9.
"2024 Oct 1;24(1):1220. doi: 10.1186/s12885-024-12961-9."
Show evidence (1 reference)
PMID:39354418 SUPPORT Other
"2024 Oct 1;24(1):1220. doi: 10.1186/s12885-024-12961-9."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
Melanoma: Diagnosis and Treatment.
1 finding
Lauters R(1), Brown AD(2), Harrington KA(3).
"Lauters R(1), Brown AD(2), Harrington KA(3)."
Show evidence (1 reference)
PMID:39418569 SUPPORT Human Clinical
"Lauters R(1), Brown AD(2), Harrington KA(3)."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
High BRAF V600 Mutation Level Associated with Worse Outcome in Metastatic Melanoma Patients Receiving BRAF and MEK Inhibitors.
1 finding
2024 Nov 7;104:adv40913. doi: 10.2340/actadv.v104.40913.
"2024 Nov 7;104:adv40913. doi: 10.2340/actadv.v104.40913."
Show evidence (1 reference)
PMID:39508497 SUPPORT Other
"2024 Nov 7;104:adv40913. doi: 10.2340/actadv.v104.40913."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
European consensus-based interdisciplinary guideline for melanoma. Part 1: Diagnostics - Update 2024.
1 finding
2025 Jan 17;215:115152. doi: 10.1016/j.ejca.2024.115152.
"2025 Jan 17;215:115152. doi: 10.1016/j.ejca.2024.115152."
Show evidence (1 reference)
PMID:39700658 SUPPORT Other
"2025 Jan 17;215:115152. doi: 10.1016/j.ejca.2024.115152."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
BRAF V600E in cancer: Exploring structural complexities, mutation profiles, and pathway dysregulation.
1 finding
2025 Mar 1;446(1):114440. doi: 10.1016/j.yexcr.2025.114440.
"2025 Mar 1;446(1):114440. doi: 10.1016/j.yexcr.2025.114440."
Show evidence (1 reference)
PMID:39961465 SUPPORT Other
"2025 Mar 1;446(1):114440. doi: 10.1016/j.yexcr.2025.114440."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
FAK inhibition combined with the RAF-MEK clamp avutometinib overcomes resistance to targeted and immune therapies in BRAF V600E melanoma.
1 finding
2025 Mar 10;43(3):428-445.e6. doi: 10.1016/j.ccell.2025.02.001.
"2025 Mar 10;43(3):428-445.e6. doi: 10.1016/j.ccell.2025.02.001."
Show evidence (1 reference)
PMID:40020669 SUPPORT Other
"2025 Mar 10;43(3):428-445.e6. doi: 10.1016/j.ccell.2025.02.001."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
Clinical validation of droplet digital PCR assays in detecting BRAF(V600)-mutant circulating tumour DNA as a prognostic biomarker in patients with resected stage III melanoma receiving adjuvant therapy (COMBI-AD): a biomarker analysis from a double-blind, randomised phase 3 trial.
1 finding
Cell-free, circulating tumour DNA (ctDNA) is an established measure of minimal residual disease; however, it is not utilised in melanoma management.
"Cell-free, circulating tumour DNA (ctDNA) is an established measure of minimal residual disease; however, it is not utilised in melanoma management."
Show evidence (1 reference)
PMID:40250457 SUPPORT Other
"Cell-free, circulating tumour DNA (ctDNA) is an established measure of minimal residual disease; however, it is not utilised in melanoma management."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
Efficacy of encorafenib plus binimetinib in patients with BRAF-mutated melanoma brain metastases: Results from the Dutch Melanoma Treatment Registry.
1 finding
2025 Jun 18;223:115514. doi: 10.1016/j.ejca.2025.115514.
"2025 Jun 18;223:115514. doi: 10.1016/j.ejca.2025.115514."
Show evidence (1 reference)
PMID:40411977 SUPPORT Other
"2025 Jun 18;223:115514. doi: 10.1016/j.ejca.2025.115514."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
POLARIS: encorafenib plus binimetinib for people with BRAF V600-mutant melanoma with brain metastasis.
1 finding
2025 Jul;21(16):1961-1963. doi: 10.1080/14796694.2025.2514426.
"2025 Jul;21(16):1961-1963. doi: 10.1080/14796694.2025.2514426."
Show evidence (1 reference)
PMID:40503961 SUPPORT Other
"2025 Jul;21(16):1961-1963. doi: 10.1080/14796694.2025.2514426."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
COP1 Deficiency in BRAF(V600E) Melanomas Confers Resistance to Inhibitors of the MAPK Pathway.
1 finding
2025 Jun 25;14(13):975. doi: 10.3390/cells14130975.
"2025 Jun 25;14(13):975. doi: 10.3390/cells14130975."
Show evidence (1 reference)
PMID:40643496 SUPPORT Other
"2025 Jun 25;14(13):975. doi: 10.3390/cells14130975."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
Targeted therapy for rare BRAF-mutated melanoma: Updated multicenter analysis and launch of a publicly accessible online outcome database.
1 finding
2025 Oct 1;228:115703. doi: 10.1016/j.ejca.2025.115703.
"2025 Oct 1;228:115703. doi: 10.1016/j.ejca.2025.115703."
Show evidence (1 reference)
PMID:40850313 SUPPORT Other
"2025 Oct 1;228:115703. doi: 10.1016/j.ejca.2025.115703."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
Exploratory Analysis of Biomarkers and Treatment Outcomes from the COLUMBUS Study in BRAF V600E/K-Mutant Advanced or Metastatic Melanoma.
1 finding
The greatest benefits of encorafenib plus binimetinib were observed in patients with evidence of high TMB and/or tumor-immune infiltration.
"The greatest benefits of encorafenib plus binimetinib were observed in patients with evidence of high TMB and/or tumor-immune infiltration."
Show evidence (1 reference)
PMID:41537702 SUPPORT Human Clinical
"The greatest benefits of encorafenib plus binimetinib were observed in patients with evidence of high TMB and/or tumor-immune infiltration."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.
PHI-501, a dual inhibitor of RAF and DDR1/2, overcomes MAPK drug resistance in Melanoma.
1 finding
Melanoma, an aggressive skin cancer caused by BRAF or NRAS mutations, is characterized by the hyperactivation of the MAPK pathway.
"Melanoma, an aggressive skin cancer caused by BRAF or NRAS mutations, is characterized by the hyperactivation of the MAPK pathway."
Show evidence (1 reference)
PMID:41935307 SUPPORT Other
"Melanoma, an aggressive skin cancer caused by BRAF or NRAS mutations, is characterized by the hyperactivation of the MAPK pathway."
Deep research cited this publication as relevant literature for BRAF V600 Mutant Melanoma.

Deep Research

2
Falcon โ–ธ
Disease Characteristics Research Template
Edison Scientific Literature 68 citations 2026-04-05T13:30:31.689756

Question: You are an expert researcher providing comprehensive, well-cited information.

Provide detailed information focusing on: 1. Key concepts and definitions with current understanding 2. Recent developments and latest research (prioritize 2023-2024 sources) 3. Current applications and real-world implementations 4. Expert opinions and analysis from authoritative sources 5. Relevant statistics and data from recent studies

Format as a comprehensive research report with proper citations. Include URLs and publication dates where available. Always prioritize recent, authoritative sources and provide specific citations for all major claims.

Disease Characteristics Research Template

Target Disease

  • Disease Name: BRAF V600 Mutant Melanoma
  • MONDO ID: (if available)
  • Category:

Research Objectives

Please provide a comprehensive research report on BRAF V600 Mutant Melanoma covering all of the disease characteristics listed below. This report will be used to populate a disease knowledge base entry. Be thorough and cite primary literature (PMID preferred) for all claims.

For each section, suggested databases/resources are listed. These are the first places you should search for information on each topic.


1. Disease Information

Search first: OMIM, Orphanet, ICD-10/ICD-11, MeSH, PubMed

  • What is the disease? Provide a concise overview.
  • What are the key identifiers? (OMIM, Orphanet, ICD-10/ICD-11, MeSH, Mondo)
  • What are the common synonyms and alternative names?
  • Is the information derived from individual patients (e.g., EHR) or aggregated disease-level resources?

2. Etiology

  • Disease Causal Factors: What are the primary causes? (genetic, environmental, infectious, mechanistic)
  • Risk Factors:

    Search first: PubMed, Cochrane Library, UpToDate, clinical guidelines, ClinVar, ClinGen, GWAS Catalog, PheGenI, CTD, CDC, WHO, epidemiological databases

  • Genetic risk factors (causal variants, susceptibility loci, modifier genes)
  • Environmental risk factors (toxins, lifestyle, occupational exposures, age, sex, family history)
  • Protective Factors:

    Search first: PubMed, Cochrane Library, clinical trial databases, GWAS Catalog, gnomAD, WHO, CDC, nutrition databases

  • Genetic protective factors (protective variants, modifier alleles)
  • Environmental protective factors (diet, lifestyle, exposures that reduce risk)
  • Gene-Environment Interactions: How do genetic and environmental factors interact to influence disease?

    Search first: CTD, PubMed, PheGenI, GxE databases

3. Phenotypes

Search first: HPO (Human Phenotype Ontology), OMIM, Orphanet, PubMed, clinicaltrials.gov, MedDRA, SNOMED CT, DECIPHER, LOINC

For each phenotype, provide: - Phenotype type: symptoms, clinical signs, physical manifestations, behavioral changes, or laboratory abnormalities

For symptoms/signs: HPO, OMIM, Orphanet, PubMed For behavioral changes: HPO, DSM, RDoC (Research Domain Criteria), PubMed For laboratory abnormalities: LOINC, SNOMED CT, LabTests Online, PubMed - Phenotype characteristics: Search first: OMIM, Orphanet, HPO, PubMed - Age of symptom onset (neonatal, childhood, adult-onset, late-onset) - Symptom severity (mild, moderate, severe, variable) - Symptom progression (stable, progressive, episodic, fluctuating) - Frequency among affected individuals (percentage or qualitative) - Quality of life impact: Effects on daily functioning and well-being (per-phenotype when possible) Search first: EQ-5D database, SF-36, WHO QOL databases, PubMed - Suggest HPO (Human Phenotype Ontology) terms for each phenotype

4. Genetic/Molecular Information

  • Causal Genes: Gene mutations or chromosomal abnormalities responsible for disease (gene symbols, OMIM IDs)

    Search first: OMIM, ClinVar, HGMD, Ensembl, NCBI Gene

  • Pathogenic Variants:
  • Affected genes (gene symbols, HGNC IDs) > Search first: OMIM, NCBI Gene, Ensembl, HGNC, UniProt, GeneCards
  • Variant classification (pathogenic, likely pathogenic, VUS per ACMG/AMP guidelines) > Search first: ClinVar, ClinGen, ACMG/AMP guidelines, VarSome
  • Variant type/class (missense, frameshift, nonsense, splice-site, structural)
  • Allele frequency in population databases > Search first: gnomAD, 1000 Genomes, ExAC, TOPMed, dbSNP
  • Somatic vs germline origin > Search first: COSMIC (somatic), ClinVar, ICGC, TCGA
  • Functional consequences (loss of function, gain of function, dominant negative)
  • Modifier Genes: Genes that modify disease severity or expression
  • Epigenetic Information: DNA methylation, histone modifications, chromatin changes affecting disease

    Search first: ENCODE, Roadmap Epigenomics, MethBase, DiseaseMeth

  • Chromosomal Abnormalities: Large-scale genetic changes (aneuploidy, translocations, inversions)

    Search first: DECIPHER, ClinVar, ECARUCA, UCSC Genome Browser

5. Environmental Information

  • Environmental Factors: Non-genetic contributing factors (toxins, radiation, pollution, occupational exposure)

    Search first: CTD (Comparative Toxicogenomics Database), TOXNET, PubMed, EPA databases

  • Lifestyle Factors: Behavioral factors (smoking, diet, exercise, alcohol consumption)

    Search first: CDC databases, WHO, PubMed, NHANES

  • Infectious Agents: If applicable, pathogens causing or triggering disease (bacteria, viruses, fungi, parasites)

    Search first: NCBI Taxonomy, ViPR, BV-BRC, MicrobeDB, GIDEON

6. Mechanism / Pathophysiology

  • Molecular Pathways: Specific signaling cascades or biochemical pathways involved (Wnt, MAPK, mTOR, PI3K-AKT, etc.)

    Search first: KEGG, Reactome, WikiPathways, PathBank, BioCyc

  • Cellular Processes: Cell-level mechanisms (apoptosis, autophagy, cell cycle dysregulation, inflammation, etc.)

    Search first: Gene Ontology (GO), Reactome, KEGG, PubMed

  • Protein Dysfunction: How protein structure or function is altered (misfolding, aggregation, loss of function, gain of function)

    Search first: UniProt, PDB (Protein Data Bank), InterPro, Pfam, AlphaFold

  • Metabolic Changes: Alterations in metabolic processes (energy metabolism, lipid metabolism, amino acid metabolism)

    Search first: KEGG, BioCyc, HMDB (Human Metabolome Database), BRENDA

  • Immune System Involvement: Role of immune response (autoimmunity, immunodeficiency, chronic inflammation)

    Search first: ImmPort, Immunome Database, IEDB, Gene Ontology

  • Tissue Damage Mechanisms: How tissues/ are injured (oxidative stress, ischemia, fibrosis, necrosis)

    Search first: PubMed, Gene Ontology, Reactome

  • Biochemical Abnormalities: Specific molecular defects (enzyme deficiencies, receptor dysfunction, ion channel defects)

    Search first: BRENDA, UniProt, KEGG, OMIM, PubMed

  • Epigenetic Changes: DNA methylation, histone modifications affecting gene expression in disease

    Search first: ENCODE, Roadmap Epigenomics, MethBase, DiseaseMeth

  • Molecular Profiling (if available):
  • Transcriptomics/gene expression changes > Search first: GEO (Gene Expression Omnibus), ArrayExpress, GTEx, Human Cell Atlas, SRA
  • Proteomics findings > Search first: PRIDE, ProteomeXchange, Human Protein Atlas, STRING, BioGRID
  • Metabolomics signatures > Search first: MetaboLights, Metabolomics Workbench, HMDB, METLIN
  • Lipidomics alterations > Search first: LIPID MAPS, SwissLipids, LipidHome, Metabolomics Workbench
  • Genomic structural features > Search first: UCSC Genome Browser, Ensembl, NCBI, dbVar, DGV
  • Advanced Technologies (if applicable):
  • Single-cell analysis findings (cell-type specific mechanisms, cellular heterogeneity) > Search first: Human Cell Atlas, Single Cell Portal, GEO, CELLxGENE
  • Spatial transcriptomics findings > Search first: GEO, Spatial Research, Vizgen, 10x Genomics data
  • Multi-omics integration results > Search first: TCGA, ICGC, cBioPortal, LinkedOmics, PubMed
  • Functional genomics screens (CRISPR, RNAi) > Search first: DepMap, GenomeRNAi, PubMed, BioGRID ORCS

For each mechanism, describe: - The causal chain from initial trigger to clinical manifestation - Which mechanisms are upstream vs downstream - What cell types and biological processes are involved - Suggest GO terms for biological processes and CL terms for cell types

7. Anatomical Structures Affected

  • Organ Level:
  • Primary organs directly affected
  • Secondary organ involvement (complications, secondary effects)
  • Body systems involved (cardiovascular, nervous, digestive, respiratory, endocrine, etc.)

    Search first: Uberon, FMA (Foundational Model of Anatomy), OMIM, HPO, ICD-11, MeSH, SNOMED CT

  • Tissue and Cell Level:
  • Specific tissue types affected (epithelial, connective, muscle, nervous)
  • Specific cell populations targeted (with Cell Ontology terms)

    Search first: Uberon, Human Protein Atlas, Cell Ontology, Human Cell Atlas, CellMarker, PanglaoDB

  • Subcellular Level:
  • Cellular compartments involved (mitochondria, nucleus, ER, lysosomes) (with GO Cellular Component terms)

    Search first: Gene Ontology (Cellular Component), UniProt, Human Protein Atlas

  • Localization:
  • Specific anatomical sites (with UBERON terms) > Search first: FMA, Uberon, NeuroNames (for brain), SNOMED CT
  • Lateralization (unilateral, bilateral, asymmetric) > Search first: HPO, clinical literature, imaging databases

8. Temporal Development

  • Onset:
  • Typical age of onset (congenital, pediatric, adult, geriatric)
  • Onset pattern (acute, subacute, chronic, insidious)

    Search first: OMIM, Orphanet, HPO, PubMed

  • Progression:
  • Disease stages (early, intermediate, advanced, end-stage) > Search first: Cancer Staging Manual (AJCC), WHO classifications, PubMed
  • Progression rate (rapid, slow, variable)
  • Disease course pattern (episodic, relapsing-remitting, progressive, stable)
  • Disease duration (self-limited, chronic lifelong)

    Search first: Disease registries, longitudinal cohort databases, natural history studies, PubMed, Orphanet, OMIM

  • Patterns:
  • Remission patterns (spontaneous, treatment-induced) > Search first: Clinical trial databases, disease registries, PubMed
  • Critical periods (time windows of vulnerability or opportunity for intervention) > Search first: PubMed, developmental biology databases, clinical guidelines

9. Inheritance and Population

  • Epidemiology:
  • Prevalence (cases per 100,000 at given time)
  • Incidence (new cases per 100,000 per year)

    Search first: Orphanet, CDC, WHO, GBD (Global Burden of Disease), national registries, SEER, disease registries

  • For Genetic Etiology:
  • Inheritance pattern (AD, AR, X-linked, mitochondrial, multifactorial, polygenic) > Search first: OMIM, Orphanet, ClinVar, GTR (Genetic Testing Registry)
  • Penetrance (complete, incomplete, age-dependent) > Search first: ClinVar, OMIM, PubMed, ClinGen
  • Expressivity (variable, consistent) > Search first: OMIM, ClinVar, PubMed
  • Genetic anticipation (increasing severity in successive generations) > Search first: OMIM, PubMed (especially for repeat expansion disorders)
  • Germline mosaicism > Search first: ClinVar, OMIM, genetic counseling literature, PubMed
  • Founder effects (population-specific mutations) > Search first: gnomAD, population genetics databases, PubMed
  • Consanguinity role > Search first: OMIM, population studies, genetic counseling resources
  • Carrier frequency > Search first: gnomAD, carrier screening databases, GeneReviews, GTR
  • Population Demographics:
  • Affected populations (ethnic or demographic groups with higher prevalence) > Search first: gnomAD, 1000 Genomes, PAGE Study, PubMed, population registries
  • Geographic distribution (endemic areas, regional variation) > Search first: WHO, CDC, GBD, Orphanet, geographic epidemiology databases
  • Geographic distribution of specific variants
  • Sex ratio (male:female) > Search first: Disease registries, OMIM, PubMed, epidemiological databases
  • Age distribution of affected individuals > Search first: CDC, disease registries, SEER, Orphanet

10. Diagnostics

  • Clinical Tests:
  • Laboratory tests (blood, urine, tissue chemistry, specific enzyme assays) > Search first: LOINC, LabTests Online, PubMed
  • Biomarkers (proteins, metabolites, genetic markers, circulating biomarkers) > Search first: FDA Biomarker List, BEST (Biomarkers, EndpointS, and other Tools), PubMed
  • Imaging studies (X-ray, CT, MRI, PET, ultrasound) > Search first: RadLex, DICOM, Radiopaedia, imaging databases
  • Functional tests (pulmonary function, cardiac stress tests) > Search first: LOINC, clinical guidelines, PubMed
  • Electrophysiology (EEG, EMG, ECG, nerve conduction studies) > Search first: LOINC, clinical neurophysiology databases, PubMed
  • Biopsy findings (histopathology, immunohistochemistry) > Search first: SNOMED CT, College of American Pathologists resources, PubMed
  • Pathology findings (microscopic examination) > Search first: SNOMED CT, Digital Pathology databases, PubMed
  • Genetic Testing:

    Search first: GTR (Genetic Testing Registry), GeneReviews, ClinGen

  • Overview of recommended genetic testing approach
  • Whole genome sequencing (WGS) utility > Search first: GTR, ClinVar, GEL (Genomics England), gnomAD
  • Whole exome sequencing (WES) utility > Search first: GTR, ClinVar, OMIM, GeneMatcher
  • Gene panels (which panels, which genes) > Search first: GTR, ClinVar, laboratory-specific databases
  • Single gene testing > Search first: GTR, ClinVar, OMIM, GeneReviews
  • Chromosomal microarray (CMA) > Search first: DECIPHER, ClinVar, dbVar, ECARUCA
  • Karyotyping > Search first: Chromosome Abnormality Database, ClinVar, cytogenetics resources
  • FISH > Search first: ClinVar, cytogenetics databases, PubMed
  • Mitochondrial DNA testing > Search first: MITOMAP, MSeqDR, ClinVar, GTR
  • Repeat expansion testing > Search first: GTR, ClinVar, repeat expansion databases, PubMed
  • Omics-Based Diagnostics (if applicable):
  • RNA sequencing / transcriptomics > Search first: GEO, ArrayExpress, GTEx, RNA-seq databases
  • Proteomics > Search first: PRIDE, ProteomeXchange, FDA Biomarker database
  • Metabolomics > Search first: MetaboLights, Metabolomics Workbench, HMDB
  • Epigenomics > Search first: GEO, ENCODE, Roadmap Epigenomics, MethBase
  • Liquid biopsy > Search first: COSMIC, ClinVar, liquid biopsy databases, PubMed
  • Clinical Criteria:
  • Standardized diagnostic criteria (DSM, ICD, society guidelines) > Search first: DSM-5, ICD-11, clinical society guidelines, UpToDate
  • Differential diagnosis (other conditions to rule out, with distinguishing features) > Search first: DynaMed, UpToDate, clinical decision support systems
  • Screening:
  • Screening methods for asymptomatic individuals (newborn screening, carrier screening, cascade screening) > Search first: ACMG recommendations, CDC newborn screening, GTR

11. Outcome/Prognosis

  • Survival and Mortality:
  • Survival rate (5-year, 10-year, overall) > Search first: SEER, cancer registries, disease-specific registries, PubMed
  • Life expectancy (with and without treatment if applicable) > Search first: Orphanet, disease registries, actuarial databases, PubMed
  • Mortality rate > Search first: CDC, WHO, GBD, national mortality databases
  • Disease-specific mortality (deaths directly attributable to disease) > Search first: Disease registries, CDC Wonder, GBD, PubMed
  • Morbidity and Function:
  • Morbidity (disease-related disability and health impacts) > Search first: GBD, WHO, disability databases, PubMed
  • Disability outcomes (long-term functional impairments) > Search first: ICF (International Classification of Functioning), disability registries
  • Quality of life measures (EQ-5D, SF-36, PROMIS, disease-specific tools) > Search first: EQ-5D database, SF-36, PROMIS, PubMed
  • Disease Course:
  • Complications (secondary problems: infections, organ failure, etc.) > Search first: ICD codes, disease registries, clinical databases, PubMed
  • Recovery potential (likelihood and extent of recovery, with vs without treatment) > Search first: Natural history studies, rehabilitation databases, PubMed
  • Prediction:
  • Prognostic factors (age, disease severity, biomarkers, treatment response) > Search first: Prognostic models databases, clinical calculators, PubMed
  • Prognostic biomarkers (molecular markers predicting disease course) > Search first: FDA Biomarker database, PubMed, cancer prognostic databases

12. Treatment

  • Pharmacotherapy:
  • Pharmacological treatments (drug names, drug classes, mechanisms of action) > Search first: DrugBank, RxNorm, ATC classification, DailyMed, FDA databases
  • Pharmacogenomics (how genetic variants affect drug metabolism, efficacy, toxicity) > Search first: PharmGKB, CPIC (Clinical Pharmacogenetics), FDA Table of PGx Biomarkers
  • Advanced Therapeutics:
  • Gene therapy (viral vectors, CRISPR, gene replacement, gene editing) > Search first: ClinicalTrials.gov, FDA gene therapy database, ASGCT resources
  • Cell therapy (stem cell transplant, CAR-T, cellular therapeutics) > Search first: ClinicalTrials.gov, FDA cell therapy database, FACT standards
  • RNA-based therapies (ASOs, siRNA, mRNA therapies) > Search first: ClinicalTrials.gov, FDA approvals, PubMed
  • Targeted therapies (treatments directed at specific molecular targets) > Search first: My Cancer Genome, OncoKB, ClinicalTrials.gov, FDA approvals
  • Immunotherapies (checkpoint inhibitors, monoclonal antibodies) > Search first: Cancer Immunotherapy Database, FDA approvals, ClinicalTrials.gov
  • Surgical and Interventional:
  • Surgical interventions (types of surgery, timing, outcomes) > Search first: CPT codes, surgical registries, clinical guidelines, PubMed
  • Supportive and Rehabilitative:
  • Supportive care (symptom management, pain control, nutrition) > Search first: Clinical guidelines, Cochrane Library, PubMed
  • Rehabilitation (physical therapy, occupational therapy, speech therapy) > Search first: Rehabilitation medicine databases, clinical guidelines, PubMed
  • Experimental:
  • Experimental treatments in clinical trials (with NCT identifiers if available) > Search first: ClinicalTrials.gov, EU Clinical Trials Register, WHO ICTRP
  • Treatment Outcomes:
  • Treatment response rates > Search first: Clinical trial databases, FDA reviews, systematic reviews, PubMed
  • Side effects and adverse events > Search first: FDA Adverse Event Reporting System (FAERS), MedWatch, PubMed
  • Treatment Strategy:
  • Treatment algorithms (clinical pathways, decision trees) > Search first: Clinical practice guidelines, NCCN Guidelines, UpToDate
  • Combination therapies > Search first: ClinicalTrials.gov, treatment guidelines, PubMed
  • Personalized medicine approaches (genotype-guided treatment) > Search first: My Cancer Genome, CIViC, PharmGKB, precision medicine databases

For each treatment, suggest MAXO (Medical Action Ontology) terms where applicable.

13. Prevention

  • Prevention Levels:
  • Primary prevention (preventing disease occurrence: vaccination, risk factor modification) > Search first: CDC, WHO, USPSTF recommendations, Cochrane Library
  • Secondary prevention (early detection and treatment: screening programs, early intervention) > Search first: USPSTF, CDC screening guidelines, WHO
  • Tertiary prevention (preventing complications in those with disease) > Search first: Clinical guidelines, disease management protocols, PubMed
  • Immunization: Vaccine strategies (if applicable)

    Search first: CDC vaccine schedules, WHO immunization, FDA vaccine database

  • Screening and Early Detection:
  • Screening programs (population-based: newborn screening, cancer screening) > Search first: CDC screening programs, USPSTF, cancer screening databases
  • Genetic screening (carrier screening, preimplantation genetic diagnosis, prenatal testing) > Search first: ACMG recommendations, ACOG guidelines, GTR
  • Risk stratification (identifying high-risk individuals for targeted prevention) > Search first: Risk prediction models, clinical calculators, PubMed
  • Behavioral Interventions: Lifestyle modifications to reduce risk

    Search first: CDC, WHO, behavioral intervention databases, Cochrane Library

  • Counseling: Genetic counseling (risk assessment, family planning guidance)

    Search first: NSGC resources, ACMG guidelines, GeneReviews

  • Public Health:
  • Public health interventions (sanitation, vector control, health education) > Search first: CDC, WHO, public health databases, PubMed
  • Environmental interventions (reducing environmental risk factors) > Search first: EPA databases, WHO environmental health, PubMed
  • Prophylaxis: Preventive medications or procedures

    Search first: Clinical guidelines, FDA approvals, PubMed

14. Other Species / Natural Disease

  • Taxonomy: Species affected (with NCBI Taxon identifiers)

    Search first: NCBI Taxonomy

  • Breed: Specific breeds affected (with VBO identifiers if applicable)

    Search first: VBO (Vertebrate Breed Ontology)

  • Gene: Orthologous genes in other species (with NCBI Gene IDs)

    Search first: NCBI Gene

  • Natural Disease:
  • Naturally occurring disease in other species (companion animals, wildlife) > Search first: OMIA (Online Mendelian Inheritance in Animals), VetCompass, PubMed
  • Veterinary relevance and importance in animal health > Search first: OMIA, veterinary databases, PubMed
  • Comparative Biology:
  • Comparative pathology (similarities and differences across species) > Search first: OMIA, comparative pathology databases, PubMed
  • Evolutionary conservation of disease mechanisms > Search first: HomoloGene, OrthoMCL, Alliance of Genome Resources
  • Transmission (if applicable):
  • Zoonotic potential > Search first: CDC zoonotic diseases, WHO zoonoses, GIDEON
  • Cross-species susceptibility > Search first: NCBI Taxonomy, veterinary databases, PubMed

15. Model Organisms

  • Model Types:
  • Model organism type (mammalian, invertebrate, cellular, in vitro) > Search first: Alliance of Genome Resources, model organism databases
  • Specific model systems (mouse, rat, zebrafish, Drosophila, C. elegans, yeast, cell lines, organoids, iPSCs) > Search first: MGI, RGD, ZFIN, FlyBase, WormBase, SGD, ATCC, Cellosaurus
  • Induced models (drug treatment, surgical intervention, environmental manipulation) > Search first: MGI, model organism databases, PubMed
  • Genetic Models:
  • Types available (knockout, knock-in, transgenic, conditional, humanized) > Search first: MGI, IMPC, KOMP, EuMMCR, IMSR
  • Model Characteristics:
  • Phenotype recapitulation (how well model reproduces human disease features) > Search first: Model organism databases, comparative studies, PubMed
  • Model limitations (aspects of human disease not captured) > Search first: Model organism databases, PubMed, review articles
  • Applications:
  • Research applications (what aspects of disease can be studied) > Search first: Model organism databases, PubMed
  • Resources:
  • Model databases > Search first: MGI, RGD, ZFIN, FlyBase, WormBase, IMSR, EMMA, MMRRC

Citation Requirements

  • Cite primary literature (PMID preferred) for all mechanistic and clinical claims
  • Prioritize recent reviews and landmark papers
  • Include direct quotes from abstracts where possible to support key statements
  • Distinguish evidence source types: human clinical, model organism, in vitro, computational

Output Format

Structure your response as a comprehensive narrative organized by the sections above. For each section, provide: - Factual content with specific details (numbers, percentages, gene names, variant nomenclature) - Ontology term suggestions (HPO, GO, CL, UBERON, CHEBI, MAXO, MONDO) where applicable - Evidence citations with PMIDs - Direct quotes from abstracts to support key claims - Clear indication when information is not available or not applicable for this disease

This report will be used to populate a disease knowledge base entry with: - Pathophysiology descriptions with causal chains - Gene/protein annotations (HGNC, GO terms) - Phenotype associations (HP terms) with frequencies - Cell type involvement (CL terms) - Anatomical locations (UBERON terms) - Chemical entities (CHEBI terms) - Treatment annotations (MAXO terms) - Evidence items with PMIDs and exact abstract quotes - Epidemiology, prognosis, diagnostic, and prevention information - Animal model descriptions with phenotype recapitulation details

Disease Characteristics Research Report: BRAF V600โ€“Mutant Melanoma

Target Disease

  • Disease name: BRAF V600โ€“mutant cutaneous melanoma (localized, resectable, unresectable/metastatic) (marquezrodas2024seomgemclinicalguidelines pages 1-2, castellani2023brafmutationsin pages 1-2)
  • Category: Neoplastic disease (cutaneous malignant melanoma defined by oncogenic BRAF V600 driver mutation)
  • MONDO ID: Not identified in the retrieved primary/guideline sources in this run (marquezrodas2024seomgemclinicalguidelines pages 1-2, NCT02036086 chunk 2)
Disease label ICD-10 code MeSH term / ID Key molecular synonyms Staging system referenced Source (first author, year) Publication date URL / DOI
BRAF V600โ€“mutant cutaneous melanoma C43 (malignant melanoma of skin) (hoejberg2016trendsinmelanoma pages 1-3) Melanoma / D008545 (NCT02036086 chunk 2) BRAFmut; BRAFV600mut; BRAFV600E/K (marquezrodas2024seomgemclinicalguidelines pages 1-2, ghate2018healthcareresourceutilization pages 1-5) AJCC 8th edition (marquezrodas2024seomgemclinicalguidelines pages 1-2, dixon2024primarycutaneousmelanomaโ€”management pages 1-2) Mรกrquez-Rodas, 2024; Hoejberg, 2016; ClinicalTrials.gov NCT02036086 (marquezrodas2024seomgemclinicalguidelines pages 1-2, NCT02036086 chunk 2, hoejberg2016trendsinmelanoma pages 1-3) May 2024; Jan 2016; trial record 2015 https://doi.org/10.1007/s12094-024-03497-2 ; https://doi.org/10.3109/0284186x.2015.1114677 ; NCT02036086
BRAF V600โ€“mutant metastatic melanoma C43 (used for malignant melanoma of skin in registry-based melanoma coding; metastatic subset not separately coded in retrieved texts) (hoejberg2016trendsinmelanoma pages 1-3) Melanoma / D008545 (NCT02036086 chunk 2) BRAF-mutant melanoma; BRAFV600-mutant melanoma; BRAFV600E/Kโ€“mutant advanced or metastatic melanoma (dummer2026exploratoryanalysisof pages 20-21) AJCC 8th edition referenced in melanoma guidelines/management sources (marquezrodas2024seomgemclinicalguidelines pages 1-2, dixon2024primarycutaneousmelanomaโ€”management pages 1-2) Dummer, 2026; Ghate, 2018; ClinicalTrials.gov NCT02036086 (dummer2026exploratoryanalysisof pages 20-21, ghate2018healthcareresourceutilization pages 1-5, NCT02036086 chunk 2) Jan 2026; Aug 2018; trial record 2015 https://doi.org/10.1158/1078-0432.ccr-25-3262 ; https://doi.org/10.1080/03007995.2018.1501351 ; NCT02036086

Table: This table summarizes the principal coded disease terms and naming conventions that can anchor a knowledge base entry for BRAF V600โ€“mutant melanoma. It also notes the staging framework used in the retrieved guideline and trial sources.

1. Disease Information

Definition/overview. Cutaneous melanoma is a malignant neoplasm derived from melanocytes and is the skin-cancer subtype responsible for most skin cancer deaths due to metastatic potential (belloni2025treatmentrelatedadverseevents pages 1-2, frantz2020fromtankto pages 1-3). โ€œBRAF V600โ€“mutant melanomaโ€ is a molecularly defined subset characterized by an activating missense substitution at BRAF codon 600 (most commonly V600E; also V600K/R/D/M), which constitutively activates MAPK signaling and enables use of BRAF/MEK targeted therapies (castellani2023brafmutationsin pages 1-2, castellani2023brafmutationsin pages 2-4).

Key identifiers and code systems (available in retrieved sources). Melanoma was operationalized as ICD-10 C43 in a Danish registry analysis (hoejberg2016trendsinmelanoma pages 1-3). A ClinicalTrials.gov record lists MeSH โ€œMelanomaโ€ (MeSH ID D008545) (NCT02036086 chunk 2).

Common synonyms/alternative names used in the literature. โ€œCutaneous melanoma,โ€ โ€œBRAF-mutant melanoma,โ€ โ€œBRAF V600E/Kโ€“mutant melanoma,โ€ and shorthand โ€œBRAFmut/BRAFV600mutโ€ appear in clinical and review literature and guidelines (mohr2025updateonthe pages 2-3, marquezrodas2024seomgemclinicalguidelines pages 1-2, dummer2026exploratoryanalysisof pages 20-21).

Evidence source type. The evidence synthesized here is primarily aggregated disease-level knowledge (guidelines/reviews), augmented with randomized trials and observational/real-world cohorts (marquezrodas2024seomgemclinicalguidelines pages 1-2, bai2023dabrafenibplustrametinib pages 1-2, ascierto2024sequentialimmunotherapyand pages 1-2).

2. Etiology

Causal and mechanistic factors. Ultraviolet (UV) radiation (natural sunlight and artificial tanning) is consistently described as the leading environmental risk factor for melanoma development (florent2023brafv600mutatedmetastatic pages 1-2, mohr2025updateonthe pages 2-2). Molecularly, BRAF V600 mutations are common early driver events (including in nevi), but additional alterations are typically required for progression to melanoma (pelosi2024brafmutantmelanomasbiology pages 4-5, pelosi2024brafmutantmelanomasbiology pages 2-4).

Risk factors (environmental/host/genetic). Reported risks include high UV exposure, personal or family history of melanoma (florent2023brafv600mutatedmetastatic pages 1-2), and host pigmentation phenotypes (e.g., pale skin, freckles, light/red hair) associated with increased melanoma risk (castellani2023brafmutationsin pages 1-2). BRAF-mutant melanomas are reported to be more frequent in younger patients and those with intermittent (occasional) sun exposure compared with chronically sun-exposed individuals (castellani2023brafmutationsin pages 2-4). The V600K subtype is specifically linked to chronic sun damage/exposure (pelosi2024brafmutantmelanomasbiology pages 4-5, pelosi2024brafmutantmelanomasbiology pages 2-4).

Protective factors. Direct protective factors were not quantified in the retrieved melanoma/BRAF V600โ€“specific sources; however, UV exposure is the leading modifiable driver, implying sun-protective behaviors as primary prevention (mohr2025updateonthe pages 2-2, manganelli2025skinphotodamageand pages 1-2).

Geneโ€“environment interaction (current understanding). One mechanistic bridge between UV exposure and melanocyte biology is UV-triggered melanocortin signaling (e.g., ฮฑ-MSH/MC1R โ†’ MITF via cAMPโ€“PKAโ€“CREB), linking environmental exposure to transcriptional programs that intersect with MAPK pathway biology (castellani2023brafmutationsin pages 4-6).

3. Phenotypes

3.1 Core clinical phenotypes (primary disease)

  • Primary cutaneous melanoma subtypes: superficial spreading melanoma (SSM) and nodular melanoma (NM) are the most common primary histologies (~70% and ~15%, respectively) (pelosi2024brafmutantmelanomasbiology pages 1-2). NM is described as particularly lethal and responsible for ~40% of melanoma deaths (pelosi2024brafmutantmelanomasbiology pages 1-2).
  • Progression pattern: SSM is described as having radial growth followed by vertical growth and metastatic potential; NM rapidly enters vertical growth phase and tends to be thicker (pelosi2024brafmutantmelanomasbiology pages 1-2).

Suggested HPO terms (examples). - Cutaneous neoplasm/skin lesion: HP:0008069 (abnormality of skin morphology) / HP:0008064 (skin neoplasm; if using disease-phenotype mapping) - Ulceration: HP:0001052 - Increased Breslow thickness / deep invasion: not a single canonical HPO term; can map via โ€œinvasive melanomaโ€ phenotype ontology in cancer-specific vocabularies (not retrieved here)

3.2 Metastatic phenotypes and key sites

  • Brain metastases: brain metastases occur in ~40โ€“50% of patients with cutaneous melanoma and are highlighted as a major clinical problem (ascierto2024sequencingofcheckpoint pages 1-2). In SECOMBIT, new brain metastases occurred in 23/69 (targeted-first), 11/69 (immunotherapy-first), and 9/68 (sandwich) (ascierto2024sequencingofcheckpoint pages 1-2).

Suggested HPO terms (examples). - Metastatic neoplasm: HP:0003002 - Lymph node metastasis: HP:0012735 - Brain metastasis: not a standard HPO term in all releases; often represented via โ€œmetastatic neoplasm of the brainโ€ in oncology ontologies (mapping may require NCIt)

3.3 Treatment-related symptom phenotypes (toxicity burden)

A meta-analysis reported pooled toxicity prevalences for commonly used BRAF/MEK inhibitor regimens: - Vemurafenib: arthralgia 44% (95% CI 29โ€“59%); rash 39% (95% CI 22โ€“56%) (belloni2025treatmentrelatedadverseevents pages 1-2). - Dabrafenib + trametinib: fatigue 47% (95% CI 38โ€“56%); pyrexia 40% (95% CI 26โ€“54%) (belloni2025treatmentrelatedadverseevents pages 1-2).

Suggested HPO terms (examples). - Arthralgia: HP:0002829 - Rash: HP:0000988 - Pyrexia: HP:0001945 - Fatigue: HP:0012378

Quality of life (QoL). In the retrieved set, QoL evidence is largely indirect (treatment discontinuation/toxicity; patient narrative). A patient+oncologist perspective emphasizes long-term adverse effects and individualized decision-making over a decade-long course (finke2024brafv600emetastaticmelanoma pages 1-2).

4. Genetic/Molecular Information

4.1 Causal gene(s) and driver variants

  • Causal/driver gene: BRAF (HGNC:1097; OMIM *164757 referenced) (castellani2023brafmutationsin pages 2-4).
  • Variant spectrum and relative frequencies (melanoma): somatic BRAF variants occur in ~50% of melanomas; most are codon-600 substitutions. V600E accounts for ~70โ€“88% of BRAF-positive melanomas; V600K ~10โ€“20%; non-V600 ~11% (castellani2023brafmutationsin pages 2-4).

4.2 Functional consequences and pathways

  • MAPK activation: BRAFV600 (class I) is a RAS-independent activating mutant that constitutively activates the RAS/RAF/MEK/ERK cascade (shang2026brafinhibitorresistance pages 2-3, cosci2025molecularbasisof pages 2-4). V600E is described as a phosphomimetic with ~480-fold increased kinase activity and associated with increased cell growth (cosci2025molecularbasisof pages 2-4).

Suggested GO Biological Process terms (examples). - MAPK cascade: GO:0000165 - ERK1 and ERK2 cascade: GO:0070371 - Positive regulation of cell population proliferation: GO:0008284 - Epithelial to mesenchymal transition (phenotype switching analogue): GO:0001837

Suggested Cell Ontology (CL) terms (examples). - Melanocyte: CL:0000148 - Regulatory T cell (immune evasion context): CL:0000815 (supported by BRAF-driven Treg recruitment models in the broader literature base retrieved) (shang2026brafinhibitorresistance pages 2-3)

4.3 Co-mutations / modifiers and resistance biology

Co-altered pathways/genes frequently implicated include NRAS, NF1, PTEN, TP53, CDKN2A, TERT promoter, and regulators of melanoma state such as MITF (pelosi2024brafmutantmelanomasbiology pages 1-2, castellani2023brafmutationsin pages 11-12).

Mechanisms of resistance to BRAF-targeted therapy include: - Primary resistance in ~50% of treatment-naรฏve patients (reported) (castellani2023brafmutationsin pages 11-12). - Acquired resistance frequently via MAPK reactivation (~80% of BRAFi-resistant tumors) and/or PI3K/AKT/mTOR pathway activation (castellani2023brafmutationsin pages 11-12). - Adaptive resistance via loss of ERK negative feedback leading to RTK upregulation (e.g., PDGFRฮฒ, EGFR) (castellani2023brafmutationsin pages 11-12). - Phenotype switching involving MITF-high melanocyte-like vs MITF-low mesenchymal invasive states (AXL/EGFR/TEAD programs; WNT5A/ROR2 axis) (castellani2023brafmutationsin pages 11-12).

5. Environmental Information

Primary environmental driver is UV radiation exposure (sunlight; indoor tanning), with UVA/UVB causing DNA damage, oxidative stress, inflammation, and immunosuppression (castellani2023brafmutationsin pages 1-2, manganelli2025skinphotodamageand pages 1-2). No infectious etiology is indicated in the retrieved sources.

6. Mechanism / Pathophysiology

Causal chain (simplified): UV-induced DNA damage and mutagenesis in melanocytes + acquisition of activating BRAFV600 mutation โ†’ constitutive MAPK/ERK signaling โ†’ melanocyte proliferation/survival and tumor initiation (often as nevi) โ†’ additional cooperating alterations (e.g., PTEN loss, TERT promoter) enable escape from senescence and progression โ†’ invasion/metastasis and microenvironmental remodeling โ†’ therapy response followed by adaptive/acquired resistance (MAPK reactivation, phenotype switching, RTK/PI3K bypass, autophagy) (castellani2023brafmutationsin pages 4-6, pelosi2024brafmutantmelanomasbiology pages 2-4, castellani2023brafmutationsin pages 11-12).

Immune involvement. The tumor microenvironment contributes to resistance via stromal and immune components; CAF and immune remodeling are emphasized in resistance reviews (florent2023brafv600mutatedmetastatic pages 1-2). The early immune-modulating effects of oncogenic BRAF (e.g., Treg recruitment) are also supported by retrieved experimental literature (shang2026brafinhibitorresistance pages 2-3).

7. Anatomical Structures Affected

  • Primary: skin (cutaneous melanoma; melanocytes in epidermal basal layer) (belloni2025treatmentrelatedadverseevents pages 1-2, saeed2024cutaneousoncologystrategies pages 1-2).
  • Regional spread: lymph nodes (stage III) and lymphatic drainage, with EV-based detection in exudative seroma after lymphadenectomy (garciasilva2019useofextracellular pages 1-2).
  • Distant metastases: brain is a common metastatic site (brain metastases in ~40โ€“50% of cutaneous melanoma patients) (ascierto2024sequencingofcheckpoint pages 1-2).

Suggested UBERON terms (examples). - Skin: UBERON:0002097 - Lymph node: UBERON:0000029 - Brain: UBERON:0000955

8. Temporal Development

  • Onset: melanoma median age at diagnosis reported as ~57 years in an advanced melanoma treatment review (mohr2025updateonthe pages 2-2).
  • Progression: stage IV disease historically had poor survival (reported 6โ€“12 months historically; improved with modern therapies) (finke2024brafv600emetastaticmelanoma pages 1-2).

9. Inheritance and Population

BRAF V600โ€“mutant melanoma is predominantly somatic. Hereditary melanoma (~10% of cases) is reported to lack BRAF mutations, implying BRAF V600 melanomas are primarily sporadic (castellani2023brafmutationsin pages 2-4).

Burden statistics. Global Cancer Observatory (GCO) 2022: 331,647 new melanoma cases and 58,645 deaths (imani2024theevolutionof pages 1-2). A 2025 meta-analysis summary cites similar 2022 global estimates and projects ~510,000 new cases and ~96,000 deaths by 2040 (belloni2025treatmentrelatedadverseevents pages 1-2).

Survival statistics (general melanoma). Europe-wide 5-year survival is cited at ~85% (mohr2025updateonthe pages 2-2). A melanoma screening review reports 5-year survival in most European countries is 80โ€“90% with country-level variation (czerw2024newscreeningmethods pages 2-3).

10. Diagnostics

Histopathology/biopsy. The SEOM-GEM guideline states suspicious lesions should be confirmed by excisional biopsy and staged per AJCC (marquezrodas2024seomgemclinicalguidelines pages 1-2).

IHC markers for melanoma. Recommended markers include S-100, SOX10, HMB-45, PRAME, MART-1 (marquezrodas2024seomgemclinicalguidelines pages 1-2).

Molecular testing for BRAF. SEOM-GEM: โ€œDetermination of BRAF V600 status is mandatory in patients with stage IV melanomaโ€ (marquezrodas2024seomgemclinicalguidelines pages 1-2). In clinical trials and safety literature, BRAF V600 mutation detection has been performed using PCR-based assays, NGS, and Sanger sequencing (belloni2025treatmentrelatedadverseevents pages 7-8).

Liquid biopsy / circulating biomarkers. ctDNA (BRAF V600E) is described as prognostic and dynamic with treatment, and can detect emergent resistance mutations (NRAS, MAP2K1, AKT1, PIK3CA) (castellani2023brafmutationsin pages 17-18). Extracellular vesicle DNA from lymphatic drainage (exudative seroma) can detect BRAFV600E and was reported to correlate with relapse risk in stage III disease (garciasilva2019useofextracellular pages 1-2).

11. Outcome/Prognosis

Metastatic sequencing outcomes (SECOMBIT). 4-year OS differed by first-line sequencing: 46% (targetedโ†’immunotherapy), 64% (immunotherapyโ†’targeted), 59% (sandwich) (ascierto2024sequentialimmunotherapyand pages 1-2). Total PFS to second progression at 4 years was 29%, 55%, and 54% in Arms A/B/C, respectively (ascierto2024sequentialimmunotherapyand pages 1-2).

Brain-metastasis outcomes (SECOMBIT analysis). 60-month brain-metastases-free survival was 56% (targeted-first), 80% (immunotherapy-first; HR vs A 0.40), and 85% (sandwich; HR vs A 0.35) (ascierto2024sequencingofcheckpoint pages 1-2).

12. Treatment

12.1 Targeted therapy (BRAF/MEK inhibitors)

Approved combinations are widely used in advanced disease; guideline notes include vemurafenib+cobimetinib, dabrafenib+trametinib, and encorafenib+binimetinib (marquezrodas2024seomgemclinicalguidelines pages 4-5).

Adjuvant (stage III). SEOM-GEM notes COMBI-AD supports 1 year dabrafenib+trametinib as a standard adjuvant option for completely resected stage III BRAF-mutated melanoma (marquezrodas2024seomgemclinicalguidelines pages 4-5). In a large multicenter retrospective cohort (n=598), adjuvant dabrafenib+trametinib had longer RFS than adjuvant antiโ€“PD-1 monotherapy: median RFS 51.0 vs 44.8 months; multivariable HR 0.58 (P=0.007); OS similar (multivariable HR 0.90) (bai2023dabrafenibplustrametinib pages 1-2).

MAXO suggestions (examples). - BRAF inhibitor therapy; MEK inhibitor therapy; combination targeted therapy (MAXO mapping not directly retrieved; recommended as action ontology entries).

12.2 Immunotherapy and sequencing (metastatic)

SECOMBIT provides prospective evidence supporting immunotherapy-first (ipilimumab+nivolumab) as preferred first-line sequencing for many patients with BRAF V600โ€“mutant metastatic melanoma (ascierto2024sequentialimmunotherapyand pages 1-2). The NEJM Evidence analysis further supports immunotherapy-first or sandwich sequences for reducing brain metastasis risk (ascierto2024sequencingofcheckpoint pages 1-2).

12.3 Neoadjuvant (resectable stage III)

NeoTrio tested pembrolizumab alone vs addition of dabrafenib+trametinib sequentially or concurrently. - Abstract quote: โ€œThe pathological response rate was 55% (11/20; including six pathological complete responses (pCRs)) with pembrolizumab, 50% (10/20; three pCRs) with sequential therapy and 80% (16/20; ten pCRs) with concurrent therapyโ€ฆโ€ (long2024neoadjuvantpembrolizumabdabrafenib pages 1-2). - 2-year outcomes: event-free survival 60%, 80%, 71% (pembro, sequential, concurrent) (long2024neoadjuvantpembrolizumabdabrafenib pages 1-2). - Safety quote: โ€œTreatment-related adverse events affected 75โ€“100% of patients during neoadjuvant treatment, with seven early discontinuations (all in the concurrent arm).โ€ (long2024neoadjuvantpembrolizumabdabrafenib pages 1-2).

Visual evidence (NeoTrio survival curves). Kaplanโ€“Meier curves and 12-/24-month landmark rates for EFS/RFS/OS are shown in Figure 2 (long2024neoadjuvantpembrolizumabdabrafenib media 7989da9e).

12.4 Adverse events (real-world relevance)

Pooled prevalence estimates: vemurafenib-associated arthralgia 44% and rash 39%; dabrafenib+trametinib-associated fatigue 47% and pyrexia 40% (belloni2025treatmentrelatedadverseevents pages 1-2).

13. Prevention

Primary prevention. UVR is the principal modifiable driver; a recent comprehensive photodamage review states UVR is the leading environmental factor and accounts for an estimated 60โ€“70% of cutaneous melanoma cases (manganelli2025skinphotodamageand pages 1-2).

Secondary prevention/high-risk surveillance. A systematic review of interventions to increase skin self-examination (SSE) in high-risk individuals found low-certainty evidence that interventions improve SSE practice; no evidence of effects on melanoma mortality was identified (gooley2025clinicaleffectivenessof pages 1-2). A 2024 management review emphasizes lifelong regular skin checks and considering total-body photography in patients with many nevi (dixon2024primarycutaneousmelanomaโ€”management pages 1-2).

14. Other Species / Natural Disease

No robust, BRAF V600โ€“specific naturally occurring veterinary melanoma evidence was retrieved in this run; thus, cross-species โ€œnatural diseaseโ€ mapping is incomplete.

15. Model Organisms

Murine models. A widely used inducible genetic model combines melanocyte-specific BRAFV600E with PTEN loss (Tyr::CreERT2; BrafV600E; Ptenfl/fl) for preclinical testing of targeted therapy and immunotherapy combinations (hooijkaas2012targetingbrafv600ein pages 1-2).

Zebrafish models. Zebrafish are used to model melanoma initiation, metastasis, remission, and relapse due to conserved pathways and optical accessibility (frantz2020fromtankto pages 1-3). Transgenic BRAFV600E zebrafish models show that BRAFV600E alone can generate nevi and needs cooperating lesions for melanoma, paralleling human biology (frantz2020fromtankto pages 1-3).

Expert opinions / guideline perspectives (authoritative sources)

  • SEOM-GEM guideline positions BRAF testing as mandatory in stage IV and provides evidence-based recommendations for adjuvant targeted therapy and systemic therapy selection, with explicit levels of evidence/grades (marquezrodas2024seomgemclinicalguidelines pages 1-2, marquezrodas2024seomgemclinicalguidelines pages 4-5).
  • SECOMBIT authors conclude their long-term data โ€œconfirm immunotherapy as the preferred first-line treatment approach for most patients with BRAFV600-mutant metastatic melanomaโ€ (ascierto2024sequentialimmunotherapyand pages 1-2).

Notes on evidence gaps in this run

  • MONDO identifier and ICD-11 codes were not located in the retrieved texts.
  • Many primary statements here are supported by DOIs/URLs rather than PMIDs because PubMed identifiers were not present in the retrieved excerpts.
Study Setting Population Interventions / arms Key efficacy results with numbers Key safety notes Publication date URL / DOI
SECOMBIT (Nature Communications 2024) Metastatic, first-line sequencing Untreated metastatic BRAFV600-mutant melanoma; 209 randomized, 206 treated across 37 sites in 9 countries (ascierto2024sequentialimmunotherapyand pages 1-2) Arm A: encorafenib + binimetinib until PD โ†’ ipilimumab + nivolumab; Arm B: ipilimumab + nivolumab until PD โ†’ encorafenib + binimetinib; Arm C: 8-week encorafenib + binimetinib induction โ†’ ipilimumab + nivolumab (โ€œsandwichโ€) (ascierto2024sequentialimmunotherapyand pages 1-2) 4-year OS: 46% Arm A, 64% Arm B, 59% Arm C; 4-year TPFS: 29% Arm A, 55% Arm B, 54% Arm C. Authors concluded long-term benefit with first-line immunotherapy and exploratory biomarker trends for deleterious JAK mutations / low baseline IFNฮณ (ascierto2024sequentialimmunotherapyand pages 1-2, ascierto2024sequentialimmunotherapyand pages 4-6) During treatment, deaths: 13 in Arm A, 11 in Arm B, 4 in Arm C; adverse events led to treatment discontinuation in 11, 10, and 11 patients in Arms A, B, and C, respectively (ascierto2024sequentialimmunotherapyand pages 1-2) 2 Jan 2024 https://doi.org/10.1038/s41467-023-44475-6
SECOMBIT brain metastases-free survival analysis (NEJM Evidence 2024) Metastatic sequencing; brain metastasis prevention analysis Unresectable metastatic BRAFV600-mutant melanoma without brain metastases at baseline; 206 treated patients from SECOMBIT (ascierto2024sequencingofcheckpoint pages 1-2, ascierto2024sequencingofcheckpoint pages 2-3) Same 3-arm SECOMBIT design: targetedโ†’immuno, immunoโ†’targeted, and short targeted inductionโ†’immunoโ†’targeted (ascierto2024sequencingofcheckpoint pages 1-2) New brain metastases: 23/69 Arm A, 11/69 Arm B, 9/68 Arm C. 60-month BMFS: 56% Arm A, 80% Arm B (HR vs A 0.40, 95% CI 0.23โ€“0.58), 85% Arm C (HR vs A 0.35, 95% CI 0.16โ€“0.76), favoring immunotherapy-first or sandwich approaches (ascierto2024sequencingofcheckpoint pages 1-2) Safety details not the focus of this report excerpt; sequencing effect on brain metastasis-free survival was the principal finding (ascierto2024sequencingofcheckpoint pages 1-2) 24 Sep 2024 https://doi.org/10.1056/evidoa2400087
NeoTrio (Nature Medicine 2024) Neoadjuvant / perioperative Resectable stage III BRAFV600-mutant melanoma; 60 patients randomized, 42% female; 82% V600E, 15% V600K, 3% V600R (long2024neoadjuvantpembrolizumabdabrafenib pages 1-2) Pembrolizumab alone (n=20); sequential dabrafenib + trametinib then pembrolizumab (n=20); concurrent pembrolizumab + dabrafenib + trametinib (n=20), followed by surgery and adjuvant therapy (long2024neoadjuvantpembrolizumabdabrafenib pages 1-2) Pathological response: 55% (11/20; 6 pCRs) pembrolizumab, 50% (10/20; 3 pCRs) sequential, 80% (16/20; 10 pCRs) concurrent. 24-month EFS: 60%, 80%, 71%; 24-month RFS: 66%, 80%, 75%; 24-month OS: 76%, 89%, 95% for pembrolizumab, sequential, and concurrent arms, respectively (long2024neoadjuvantpembrolizumabdabrafenib pages 1-2, long2024neoadjuvantpembrolizumabdabrafenib pages 5-7, long2024neoadjuvantpembrolizumabdabrafenib media 7989da9e) Neoadjuvant TRAEs affected 75โ€“100% of patients; 9/60 discontinued early due to neoadjuvant TRAEs, including 8/20 in the concurrent arm; seven early discontinuations during neoadjuvant treatment were all in concurrent arm in abstract summary (long2024neoadjuvantpembrolizumabdabrafenib pages 1-2) 21 Jun 2024 https://doi.org/10.1038/s41591-024-03077-5
Real-world adjuvant D/T vs antiโ€“PD-1 (eClinicalMedicine 2023) Adjuvant Resected stage III BRAF V600-mutant melanoma; 598 patients from 15 melanoma centers; D/T n=393, PD-1 n=205 (bai2023dabrafenibplustrametinib pages 1-2) Adjuvant dabrafenib + trametinib vs adjuvant antiโ€“PD-1 monotherapy after definitive surgery (bai2023dabrafenibplustrametinib pages 1-2) Median follow-up 33 months. Median RFS: 51.0 months for D/T vs 44.8 months for PD-1; univariate HR 0.66 (95% CI 0.50โ€“0.87; P=0.003), multivariate HR 0.58 (95% CI 0.39โ€“0.86; P=0.007). OS comparable: multivariate HR 0.90 (95% CI 0.48โ€“1.70; P=0.75). Among recurrences, distant metastases were more frequent with D/T (72% vs 58%) (bai2023dabrafenibplustrametinib pages 1-2, bai2023dabrafenibplustrametinib pages 5-6) D/T had higher incidence of treatment modification due to adverse events but fewer persistent adverse events than PD-1 (bai2023dabrafenibplustrametinib pages 1-2) Nov 2023 https://doi.org/10.1016/j.eclinm.2023.102290
BRAF/MEK inhibitor AE meta-analysis (Cancers 2025) Treatment safety across advanced/unresectable disease Adults with BRAF-mutant cutaneous melanoma, predominantly unresectable locally advanced or metastatic stage IIICโ€“IV across included trials (belloni2025treatmentrelatedadverseevents pages 7-8, belloni2025treatmentrelatedadverseevents pages 1-2) Review/meta-analysis of approved BRAF/MEK regimens; pooled analysis feasible for vemurafenib monotherapy and dabrafenib + trametinib (belloni2025treatmentrelatedadverseevents pages 1-2) Safety-focused study; no pooled OS/PFS efficacy endpoint reported in excerpt. Quantitative toxicity findings: vemurafenib musculoskeletal/connective-tissue disorders 24% (95% CI 6โ€“41%), arthralgia 44% (95% CI 29โ€“59%), rash 39% (95% CI 22โ€“56%); dabrafenib + trametinib constitutional toxicities 25% (95% CI 14โ€“37%), fatigue 47% (95% CI 38โ€“56%), pyrexia 40% (95% CI 26โ€“54%) (belloni2025treatmentrelatedadverseevents pages 1-2) Grade โ‰ฅ3 cutaneous AEs with vemurafenib included squamous cell carcinoma and keratoacanthoma; regimen-specific toxicity profiles emphasized for personalized care (belloni2025treatmentrelatedadverseevents pages 1-2) Sep 2025 https://doi.org/10.3390/cancers17193152

Table: This table summarizes major 2023โ€“2024 clinical evidence and one recent safety meta-analysis relevant to BRAF V600-mutant melanoma across metastatic, adjuvant, and neoadjuvant settings. It highlights study design, populations, key efficacy numbers, and the main safety signals useful for comparative interpretation.

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  37. (ascierto2024sequentialimmunotherapyand pages 4-6): Paolo A. Ascierto, Milena Casula, Jenny Bulgarelli, Marina Pisano, Claudia Piccinini, Luisa Piccin, Antonio Cossu, Mario Mandalร , Pier Francesco Ferrucci, Massimo Guidoboni, Piotr Rutkowski, Virginia Ferraresi, Ana Arance, Michele Guida, Evaristo Maiello, Helen Gogas, Erika Richtig, Maria Teresa Fierro, Celeste Lebbe, Hildur Helgadottir, Paola Queirolo, Francesco Spagnolo, Marco Tucci, Michele Del Vecchio, Maria Gonzales Cao, Alessandro Marco Minisini, Sabino De Placido, Miguel F. Sanmamed, Domenico Mallardo, Miriam Paone, Maria Grazia Vitale, Ignacio Melero, Antonio M. Grimaldi, Diana Giannarelli, Reinhard Dummer, Vanna Chiarion Sileni, and Giuseppe Palmieri. Sequential immunotherapy and targeted therapy for metastatic braf v600 mutated melanoma: 4-year survival and biomarkers evaluation from the phase ii secombit trial. Nature Communications, Jan 2024. URL: https://doi.org/10.1038/s41467-023-44475-6, doi:10.1038/s41467-023-44475-6. This article has 99 citations and is from a highest quality peer-reviewed journal.

  38. (ascierto2024sequencingofcheckpoint pages 2-3): Paolo A. Ascierto, Mario Mandalร , Pier Francesco Ferrucci, Massimo Guidoboni, Piotr Rutkowski, Virginia Ferraresi, Ana Arance, Michele Guida, Evaristo Maiello, Helen Gogas, Erika Richtig, Pietro Quaglino, Cรฉleste Lebbรฉ, Hildur Helgadottir, Paola Queirolo, Francesco Spagnolo, Marco Tucci, Michele Del Vecchio, Maria Gonzalez-Cao, Alessandro Marco Minisini, Sabino De Placido, Miguel F. Sanmamed, Milena Casula, Jenny Bulgarelli, Marina Pisano, Claudia Piccinini, Luisa Piccin, Antonio Cossu, Domenico Mallardo, Miriam Paone, Maria Grazia Vitale, Ignacio Melero, Antonio M. Grimaldi, Diana Giannarelli, Giuseppe Palmieri, Reinhard Dummer, and Vanna Chiarion Sileni. Sequencing of checkpoint or braf/mek inhibitors on brain metastases in melanoma. NEJM evidence, 3 10:EVIDoa2400087, Sep 2024. URL: https://doi.org/10.1056/evidoa2400087, doi:10.1056/evidoa2400087. This article has 12 citations and is from a peer-reviewed journal.

  39. (long2024neoadjuvantpembrolizumabdabrafenib pages 5-7): Georgina V. Long, Matteo S. Carlino, George Au-Yeung, Andrew J. Spillane, Kerwin F. Shannon, David E. Gyorki, Edward Hsiao, Rony Kapoor, Jake R. Thompson, Iris Batula, Julie Howle, Sydney Chโ€™ng, Maria Gonzalez, Robyn P. M. Saw, Thomas E. Pennington, Serigne N. Lo, Richard A. Scolyer, and Alexander M. Menzies. Neoadjuvant pembrolizumab, dabrafenib and trametinib in brafv600-mutant resectable melanoma: the randomized phase 2 neotrio trial. Nature Medicine, 30:2540-2548, Jun 2024. URL: https://doi.org/10.1038/s41591-024-03077-5, doi:10.1038/s41591-024-03077-5. This article has 38 citations and is from a highest quality peer-reviewed journal.

  40. (bai2023dabrafenibplustrametinib pages 5-6): Xue Bai, Ahmed Shaheen, Charlotte Grieco, Paolo D. dโ€™Arienzo, Florentia Mina, Juliane A. Czapla, Aleigha R. Lawless, Eleonora Bongiovanni, Umberto Santaniello, Helena Zappi, Dominika Dulak, Andrew Williamson, Rebecca Lee, Avinash Gupta, Caili Li, Lu Si, Martina Ubaldi, Naoya Yamazaki, Dai Ogata, Rebecca Johnson, Benjamin C. Park, Seungyeon Jung, Gabriele Madonna, Juliane Hochherz, Yoshiyasu Umeda, Yasuhiro Nakamura, Christoffer Gebhardt, Lucia Festino, Mariaelena Capone, Paolo Antonio Ascierto, Douglas B. Johnson, Serigne N. Lo, Georgina V. Long, Alexander M. Menzies, Kenjiro Namikawa, Mario Mandala, Jun Guo, Paul Lorigan, Yana G. Najjar, Andrew Haydon, Pietro Quaglino, Genevieve M. Boland, Ryan J. Sullivan, Andrew J.S. Furness, Ruth Plummer, and Keith T. Flaherty. Dabrafenib plus trametinib versus anti-pd-1 monotherapy as adjuvant therapy in braf v600-mutant stage iii melanoma after definitive surgery: a multicenter, retrospective cohort study. eClinicalMedicine, 65:102290, Nov 2023. URL: https://doi.org/10.1016/j.eclinm.2023.102290, doi:10.1016/j.eclinm.2023.102290. This article has 32 citations and is from a peer-reviewed journal.

OpenScientist โ–ธ
1. Disease Information
openscientist-autonomous 60 citations 2026-05-05T23:45:23.079662Z

1. Disease Information

Overview

BRAF V600 Mutant Melanoma is a molecularly defined subtype of cutaneous malignant melanoma characterized by somatic gain-of-function mutations at codon 600 of the BRAF gene (7q34). BRAF is a serine/threonine protein kinase in the MAPK/ERK signaling pathway that regulates cell proliferation, differentiation, and survival. The V600E mutation (a thymine-to-adenine transversion resulting in valine-to-glutamic acid substitution) accounts for the vast majority of cases and produces a constitutively active kinase domain that drives oncogenesis independent of upstream RAS activation (PMID: 39961465).

As noted by Paluncic et al., "40-50% of all melanoma patients harbour an activating BRAF mutation (mostly BRAF V600E)" (PMID: 33801689). Among BRAF V600 mutations, the distribution is: V600E (79%), V600K (12%), V600R (5%), and V600M (4%) (PMID: 22536370).

Key Identifiers

Identifier Value
OMIM #164757 (Melanoma, cutaneous malignant); BRAF gene: *164757
ICD-10 C43 (Malignant melanoma of skin)
ICD-11 2D40-2D4Z (Melanoma of skin)
MeSH D008545 (Melanoma); C562395 (BRAF gene mutation)
MONDO MONDO:0005012 (melanoma)
HGNC HGNC:1097 (BRAF)
ClinVar Variation ID 376069 (BRAF V600E)
COSMIC COSV56056643 (BRAF p.V600E)

Synonyms and Alternative Names

  • BRAF V600E-mutated melanoma
  • BRAF-mutant melanoma
  • BRAF V600E/K melanoma
  • V600E-positive melanoma
  • Melanoma with activating BRAF mutation
  • MAPK-driven melanoma (when referring to mechanism)

Information Sources

This report is derived from aggregated disease-level resources including published clinical trials, genomic databases (COSMIC, ClinVar, TCGA), epidemiological registries (SEER, GLOBOCAN), and primary research literature (PubMed). Individual patient-level data is referenced from landmark clinical trials (COMBI-d, COLUMBUS, IMspire150) and real-world registries (ADMIRE, Dutch Melanoma Treatment Registry).


2. Etiology

Disease Causal Factors

BRAF V600 Mutant Melanoma arises through a multi-step oncogenic process involving both genetic and environmental factors:

Somatic genetic origin: The BRAF V600E mutation is a somatic (acquired) missense mutation arising in melanocytes. It is not inherited in the germline but occurs during the lifetime of the individual. The mutation results in constitutive activation of the BRAF kinase, which "results in a constitutively active kinase domain, leading to dysregulated downstream signaling independent of extracellular stimuli. This sustained activation promotes cell proliferation, survival, angiogenesis, and hallmark features of the cancer cells" (PMID: 39961465).

UV radiation as initiating factor: Ultraviolet radiation, particularly UVB (280โ€“320 nm), is the primary environmental mutagen. UV radiation induces DNA damage in melanocytes, including the characteristic thymine dimer mutations. The BRAF V600E mutation itself (T1799A) is not a classic UV signature mutation (C>T at dipyrimidine sites), suggesting that UV may act indirectly through mutagenic stress, oxidative damage, or proliferative stimulation rather than direct photoproduct formation (PMID: 27221301).

Risk Factors

Genetic Risk Factors

  • BRAF V600E somatic mutation (driver): Present in 40โ€“50% of cutaneous melanomas; constitutive MAPK activation
  • CDKN2A (p16INK4A) germline mutations: High-penetrance melanoma susceptibility gene; loss of cell cycle control at G1/S checkpoint
  • CDK4 mutations: Rare high-penetrance susceptibility gene
  • MC1R variants: Red hair color variants (R151C, R160W, D294H) associated with fair skin, poor tanning, and increased melanoma risk
  • PTEN loss: Frequently co-occurs with BRAF V600E (seen in ~40% of BRAF-mutant melanomas); synergistic oncogenic effect through PI3K/AKT pathway activation
  • TERT promoter mutations: Common co-occurring mutations promoting telomere maintenance
  • Co-occurring NRAS mutations: Mutually exclusive with BRAF V600E in primary tumors but may arise as resistance mutations

Environmental Risk Factors

Associations with BRAF mutation were characterized by Colombino et al.: "Associations with BRAF mutation were as follows: male gender [odds ratio (OR) = 2.4], younger age (OR = 2.7), superficial spreading (OR = 15.6) and nodular melanoma (OR = 9.5), trunk localization (OR = 6.3), and intermittent sun exposure (OR = 4.6)" (PMID: 25357015).

  • Intermittent UV exposure: Strong association (OR = 4.6) vs. chronic sun exposure
  • Indoor tanning: "BRAF V600E genotype was more prevalent in ever-users than in nonusers (42.9% vs 28.3%, two-sided P = .04) and higher in ever-users who initiated indoor tanning prior to age 25 years compared with age 25 years or older (62.2% vs 31.1%, two-sided P = .003)" (PMID: 30923800)
  • Sunburn history: Blistering sunburns associated with increased absolute mutation incidence (1.67 vs 1.16 mutations/patient, P = 0.028) (PMID: 32445930)
  • Fair skin phenotype: Fitzpatrick skin types I and II
  • High nevus count: Multiple dysplastic nevi as a risk factor
  • Male sex: OR = 2.4 for BRAF mutation
  • Younger age: OR = 2.7 for BRAF mutation (median age younger than BRAF wild-type)
  • Residence in high-UV areas: OR = 5.54 (95% CI 1.19โ€“25.8) for residing in states with UV index โ‰ฅ7 vs โ‰ค5 at age 30 (PMID: 25048604)

Possible Non-Traditional Risk Factors

  • Hexavalent chromium exposure: Epidemiological data suggest heavy metal exposure may contribute; UV accounts for only 40โ€“50% of attributable melanoma risk (PMID: 21253789)

Protective Factors

Genetic Protective Factors

  • MC1R wild-type: Associated with darker skin pigmentation and improved UV protection
  • Certain HLA genotypes: Associated with improved immune surveillance
  • High MITF expression: May maintain melanocyte differentiation programs

Environmental Protective Factors

  • Sun protection behaviors: Use of sunscreen (high SPF), protective clothing, avoidance of midday sun
  • Avoidance of indoor tanning, especially before age 25
  • Regular skin self-examination and professional screening
  • Dietary factors: Some evidence for vitamin D, antioxidants, though data are inconclusive

Geneโ€“Environment Interactions

The BRAF V600E mutation appears to arise preferentially in the context of intermittent rather than chronic UV exposure, explaining its association with trunk melanomas (usually covered, intermittently exposed) in younger patients. The B-RafV600E mutation was detected in 85% of trunk melanomas in indoor workers versus 47% in outdoor workers (P = 0.03), indicating that "the B-RafV600E mutation detected in melanoma is not associated with a chronic exposure to the sun" but rather with recreational/intermittent exposure (PMID: 24424406). MC1R variants may further modify risk by impairing DNA repair capacity in the setting of UV exposure, creating a synergistic effect.


3. Phenotypes

Clinical Signs and Symptoms

Phenotype HPO Term Type Onset Severity Frequency Progression
Cutaneous melanocytic lesion (primary tumor) HP:0012056 (Cutaneous melanoma) Physical sign Adult (median 50s) Variable 100% Progressive if untreated
Asymmetric pigmented lesion HP:0200040 (Irregular hyperpigmentation) Physical sign Adult Mildโ€“moderate Very frequent Progressive
Ulceration of primary lesion HP:0200041 (Skin ulcer) Physical sign Later stages Moderateโ€“severe ~40โ€“50% Progressive
Lymphadenopathy (regional metastasis) HP:0002716 (Lymphadenopathy) Clinical sign Stage III Moderateโ€“severe Variable Progressive
Elevated serum LDH HP:0025435 (Increased circulating lactate dehydrogenase) Laboratory abnormality Advanced disease Indicator of high tumor burden ~37.5% at presentation Progressive
Fatigue HP:0012378 (Fatigue) Symptom Advanced disease Moderateโ€“severe Frequent Progressive
Brain metastases (neurological symptoms) HP:0002888 (Brain neoplasm) Clinical sign Stage IV Severe ~32% of advanced cases Progressive
Hepatomegaly/liver metastases HP:0002240 (Hepatomegaly) Clinical sign Stage IV Severe Common Progressive
Pulmonary symptoms (lung metastases) HP:0002094 (Dyspnea) Symptom Stage IV Moderateโ€“severe Common Progressive

Phenotype Characteristics Specific to BRAF V600 Mutant Melanoma

  • Age of onset: Younger than BRAF wild-type melanomas (OR = 2.7 for younger age) (PMID: 25357015)
  • Histological subtypes: Strongly associated with superficial spreading melanoma (OR = 15.6) and nodular melanoma (OR = 9.5)
  • Anatomical predilection: Trunk localization (OR = 6.3); less common on chronically sun-damaged skin (head/neck)
  • Mitotic activity: BRAF-mutated melanomas tend to be more mitotically active (PMID: 28424234)

Quality of Life Impact

Advanced BRAF V600 mutant melanoma significantly impacts quality of life through: - Physical symptoms of metastatic disease (pain, fatigue, neurological deficits from brain metastases) - Psychological distress from cancer diagnosis and treatment - Treatment-related side effects (pyrexia, arthralgia, skin toxicities from targeted therapy; immune-related adverse events from immunotherapy) - Functional impairment from disease complications


4. Genetic/Molecular Information

Causal Gene

BRAF (B-Raf Proto-Oncogene, Serine/Threonine Kinase) - HGNC ID: HGNC:1097 - NCBI Gene ID: 673 - OMIM: 164757 - Chromosomal location: 7q34 - UniProt: P15056 - Protein*: 766 amino acid serine/threonine kinase

Pathogenic Variants

Variant HGVS Notation Type Frequency Among V600 Allele Frequency (gnomAD) Origin Functional Consequence
V600E c.1799T>A (p.Val600Glu) Missense ~79% Somatic (not in germline databases) Somatic Gain of function; ~500-fold kinase activation
V600K c.1798_1799delGTinsAA (p.Val600Lys) Dinucleotide substitution ~12% Somatic Somatic Gain of function; constitutive kinase activation
V600R c.1798_1799delGTinsAG (p.Val600Arg) Dinucleotide substitution ~5% Somatic Somatic Gain of function
V600M c.1798G>A (p.Val600Met) Missense ~4% Somatic Somatic Gain of function
V600D c.1799_1800delTGinsAT (p.Val600Asp) Dinucleotide substitution Rare Somatic Somatic Gain of function

Source for variant distribution: "Among BRAF V600 mutations, 79%, 12%, 5%, and 4% were V600E, V600K, V600R, and V600M, respectively" (PMID: 22536370).

Variant classification: All V600 mutations listed are classified as pathogenic (oncogenic driver) in ClinVar and COSMIC.

Somatic origin: These mutations are somatic, not germline. They are acquired during the individual's lifetime and are not present in the germline. COSMIC reports BRAF V600E as one of the most frequently mutated positions across all human cancers.

V600K demographics: V600K was detected in 23% of men older than 60, compared with 6% in women older than 60 and 2% in both sexes younger than 60 (P < .001), suggesting age and sex-specific patterns (PMID: 25456393).

Modifier Genes and Co-occurring Alterations

  • PTEN (10q23.31): Loss-of-function mutations or deletions co-occur in ~40% of BRAF V600E melanomas; activates PI3K/AKT pathway synergistically
  • CDKN2A (9p21.3): Homozygous deletion or inactivating mutation; loss of p16INK4A and p14ARF tumor suppressors
  • TP53 (17p13.1): Mutations less common in melanoma than other cancers but contribute to genomic instability
  • TERT promoter (5p15.33): Activating promoter mutations (C228T, C250T) frequent in BRAF-mutant melanoma
  • APC, CTNNB1: Occasional Wnt pathway alterations
  • NF1: Generally mutually exclusive with BRAF V600E but defines a separate molecular subtype

Epigenetic Information

  • Global DNA hypomethylation: Common in melanoma progression
  • Promoter hypermethylation: Silencing of tumor suppressors (RASSF1A, MGMT, DAPK)
  • BRAF V600E suppresses MITF: Leading to reduced melanocyte differentiation gene expression
  • Histone modifications: H3K27me3 changes associated with melanoma progression; EZH2 overexpression
  • CpG island methylator phenotype (CIMP): Associated with BRAF V600E in colorectal cancer; less well-characterized in melanoma

Chromosomal Abnormalities

  • Chromosome 7 gain: Frequently observed (location of BRAF); may increase BRAF dosage
  • Chromosome 10 loss: Contains PTEN; frequently deleted in BRAF-mutant melanomas
  • 9p21 deletion: Loss of CDKN2A locus
  • 6p gain: Common in melanoma
  • Mutant allele-specific imbalance (MASI): BRAF V600E MASI predominantly present in distant organ metastases (79% vs 27% in LN metastases vs 13% in primary tumors, P < .001) (PMID: 25456393)

5. Environmental Information

Environmental Factors

  • Ultraviolet radiation (UVA/UVB): The primary environmental carcinogen. UVB (280โ€“320 nm) directly damages DNA; UVA (320โ€“400 nm) induces oxidative damage. "About 95% of ultraviolet A (UVA) and 5% of UVB reach the Earth's surface" (PMID: 27221301)
  • CHEBI term: CHEBI:27460 (ultraviolet radiation โ€” as a physical agent)
  • Hexavalent chromium: Proposed as a co-carcinogen; "UV light exposure accounts for only 40-50% of the attributable risk for cutaneous melanoma" (PMID: 21253789)

Lifestyle Factors

  • Indoor tanning: Strong risk factor; BRAF V600E prevalence of 62.2% in users who started before age 25 (PMID: 30923800)
  • Intermittent recreational sun exposure: Stronger association with BRAF mutation than chronic occupational exposure (OR = 4.6) (PMID: 25357015)
  • Sunburn history: Particularly childhood/adolescent blistering sunburns

Infectious Agents

  • Beta-genus HPV: May accelerate keratinocyte carcinogenesis during BRAF inhibitor therapy. ฮฒ-HPV-17, HPV-38, HPV-111 were most frequently isolated in BRAFi-associated cutaneous squamous cell carcinomas (PMID: 25724524). This is relevant to treatment-related secondary malignancies rather than melanoma etiology itself.

6. Mechanism / Pathophysiology

Molecular Pathways

RASโ€“RAFโ€“MEKโ€“ERK (MAPK) Pathway (Primary)

The central oncogenic pathway in BRAF V600 melanoma. The BRAF V600E mutation produces a constitutively active kinase that signals as a monomer (unlike wild-type BRAF which requires dimerization). This leads to sustained MEK1/2 and ERK1/2 phosphorylation, driving:

  1. Cell proliferation: Transcriptional activation of cyclin D1, c-Myc, and other cell cycle promoters
  2. Survival: Suppression of pro-apoptotic BIM, BAD; upregulation of anti-apoptotic MCL-1, BCL-2
  3. Angiogenesis: Upregulation of VEGF and other pro-angiogenic factors
  4. Invasion and metastasis: Induction of matrix metalloproteinases (MMPs), epithelial-mesenchymal transition (EMT)

KEGG pathway: hsa04010 (MAPK signaling pathway) Reactome: R-HSA-5673001 (RAF/MAP kinase cascade)

PI3K/AKT/mTOR Pathway (Cooperating)

Frequently co-activated through PTEN loss. Synergizes with MAPK pathway to promote survival and metabolic adaptation. Important in resistance to BRAF inhibitors.

KEGG pathway: hsa04151 (PI3K-Akt signaling pathway)

Wnt/ฮฒ-Catenin Pathway

Contributes to melanoma cell survival, immune evasion, and resistance to immunotherapy.

Cellular Processes

  • Uncontrolled proliferation: GO:0008283 (cell population proliferation)
  • Evasion of apoptosis: GO:0043066 (negative regulation of apoptotic process)
  • Metabolic reprogramming: GO:0006096 (glycolytic process); GO:0006119 (oxidative phosphorylation)
  • Angiogenesis: GO:0001525 (angiogenesis)
  • Immune evasion: GO:0002837 (negative regulation of immune response to tumor cell)
  • Cell migration/invasion: GO:0016477 (cell migration)

Protein Dysfunction

The BRAF V600E mutation resides in the activation segment of the kinase domain. The valine-to-glutamic acid substitution mimics the phosphorylation that normally activates the kinase, locking it in a constitutively active conformation. Wild-type BRAF kinase activity is ~70-fold lower than V600E mutant BRAF. The mutant signals as a monomer, unlike wild-type BRAF which requires RAS-dependent dimerization, explaining its RAS-independence.

UniProt: P15056 (BRAF_HUMAN) PDB: 1UWH (BRAF kinase domain), 3OG7 (BRAF V600E with vemurafenib)

Metabolic Changes

BRAF V600E drives a profound metabolic reprogramming:

"BRAF mutations augment glycolysis to promote macromolecular synthesis and proliferation" (PMID: 38972133).

The mechanistic basis: "BRAF(V600E) acts to suppress expression of the melanocyte master regulator microphthalmia-associated transcription factor (MITF) and the mitochondrial biogenesis coactivator PGC1ฮฑ. Accordingly, therapeutic inhibition of BRAF(V600E) reverses metabolic reprogramming in melanoma cells and elevates OXPHOS through increased MITF-PGC1ฮฑ levels" (PMID: 24610826).

This metabolic plasticity is a key resistance mechanism: upon BRAF inhibitor treatment, cells shift from glycolysis to oxidative phosphorylation (OXPHOS), with increased glutamine dependence and mitochondrial biogenesis. NSAIDs (diclofenac, lumiracoxib) can counteract this metabolic reprogramming and synergize with BRAF inhibitors by preventing the shift to OXPHOS (PMID: 30481565).

KEGG pathways: hsa00010 (Glycolysis/Gluconeogenesis); hsa00190 (Oxidative phosphorylation) HMDB: HMDB0000190 (L-Lactic acid โ€” elevated in glycolytic tumors)

Immune System Involvement

BRAF V600E melanoma has a complex relationship with the immune system:

  • Tumor immune evasion: BRAF V600E upregulates immunosuppressive cytokines (IL-6, IL-10, VEGF) and downregulates MHC class I expression
  • PD-L1 expression: Upregulated in BRAF-mutant tumors, particularly upon BRAF inhibitor treatment
  • T cell infiltration: BRAF inhibition increases intratumoral CD8+ T cell infiltrate, suggesting immune activation (PMID: 24903021)
  • B cell involvement: Tumor-infiltrating B cells may serve as a predictive biomarker; higher B cell signatures associated with better outcomes on dabrafenib + trametinib (PMID: 34108180)
  • Immune-related adverse events as biomarker: Vitiligo, panniculitis, and other immune-related skin lesions during BRAF/MEK inhibitor treatment predict better outcomes (HR 0.19 for disease progression, P = 0.043) (PMID: 30939167); immune AEs associated with mPFS of 42.8 months vs 6.1 months without (HR 0.22, P = 0.002) (PMID: 30096703)

Tissue Damage Mechanisms

  • Local invasion: Vertical growth phase melanoma invades dermis and subcutaneous tissue
  • Lymphatic spread: Regional lymph node metastasis (stage III)
  • Hematogenous spread: Distant metastasis to lung, liver, brain, bone, skin (stage IV)
  • Melanoma-induced stromal remodeling: Melanoma exosomes reprogram stromal fibroblasts via exosomal miR-155 and miR-210, increasing aerobic glycolysis and extracellular acidification to create a pre-metastatic niche (PMID: 30150674)

Resistance Mechanisms

Acquired resistance to BRAF inhibitors is multifactorial:

"Acquired resistance to vemurafenib associated with reactivation of MAPK signaling as observed by elevated ERK1/2 phosphorylation levels in progressive lesions and the appearance of secondary NRAS(Q61) mutations or MEK1(Q56P) or MEK1(E203K) mutations" (PMID: 23569304).

Key resistance mechanisms include: 1. MAPK reactivation: Secondary NRAS mutations, MEK mutations, BRAF amplification, BRAF splice variants 2. Alternative pathway activation: PI3K/AKT, focal adhesion kinase (FAK) signaling 3. Metabolic reprogramming: Shift from glycolysis to OXPHOS 4. Phenotype switching: Transition from proliferative to invasive state 5. Microenvironment remodeling: Stromal cell-mediated resistance 6. COP1/DET1 mutations: Acquired after BRAF inhibitor treatment, affecting oncogenic transcriptome regulation (PMID: 40643496)

Molecular Profiling

Transcriptomics

  • BRAF V600E melanomas show distinct gene expression profiles with upregulation of MAPK target genes
  • Three tumor subgroups identified by gene expression clustering including an "immune" subgroup associated with improved survival (PMID: 41537702)
  • High IFNฮณ gene signature scores and cytolytic scores predict better response to encorafenib + binimetinib

Proteomics

  • Plasma proteome alterations detectable by MAPKi treatment (PMID: 34246984)
  • p-ERK immunohistochemistry serves as a readout of MAPK pathway activity

Liquid Biopsy / Circulating Tumor DNA

  • BRAF V600 ctDNA detectable by droplet digital PCR (ddPCR) in 93% of pretreatment samples
  • Baseline ctDNA positivity rate was 13% in stage III resected disease
  • ctDNA detection associated with worse recurrence-free survival (median 3.71 vs 24.41 months in placebo; HR 2.91, P < 0.0001) (PMID: 40250457)
  • On-treatment ctDNA clearance predicts improved outcomes across all treatment arms (PMID: 33587894; PMID: 41537702)

7. Anatomical Structures Affected

Organ Level

Primary organ: Skin (UBERON:0002097) - Cutaneous melanoma arises from epidermal melanocytes

Secondary organ involvement (sites of metastasis): - Lymph nodes (UBERON:0000029): Regional spread; sentinel lymph node most commonly affected - Lung (UBERON:0002048): Most common site of distant metastasis - Liver (UBERON:0002107): Second most common distant site - Brain (UBERON:0000955): ~32% of advanced cases have brain metastases at presentation (PMID: 34243078) - Bone (UBERON:0002481): Common distant metastatic site - Distant skin/subcutaneous tissue: Transit metastases

Body systems: Integumentary (primary), lymphatic, respiratory, hepatobiliary, nervous, musculoskeletal

Tissue and Cell Level

  • Melanocytes (CL:0000148): Cell of origin; neural crest-derived pigment cells in the basal epidermis
  • Keratinocytes (CL:0000312): Surrounding cells affected by paracrine signaling
  • Tumor-infiltrating lymphocytes: CD8+ T cells (CL:0000625), CD4+ T cells (CL:0000624), B cells (CL:0000236), regulatory T cells (CL:0000815)
  • Dermal fibroblasts (CL:0000057): Reprogrammed by melanoma exosomes
  • Endothelial cells (CL:0000115): Involved in tumor angiogenesis

Subcellular Level

  • Cytoplasm/cytosol (GO:0005829): Location of BRAF kinase activity and MAPK cascade
  • Cell membrane (GO:0005886): RAS activation, receptor tyrosine kinase signaling
  • Nucleus (GO:0005634): ERK-mediated transcriptional activation
  • Mitochondria (GO:0005739): Site of metabolic reprogramming (OXPHOS vs glycolysis)
  • Lysosomes (GO:0005764): Autophagy involvement in resistance

Localization

  • Primary site predilection: Trunk (UBERON:0002100) โ€” OR = 6.3 for BRAF-mutant melanoma
  • Intermittently sun-exposed skin: Back, chest, abdomen
  • Less common in chronically sun-damaged sites: Head and neck (more associated with NRAS or NF1 mutations)
  • Lateralization: Unilateral; no specific laterality preference

8. Temporal Development

Onset

  • Typical age: Adult-onset, but younger than BRAF wild-type melanomas. Median age ~50โ€“55 years for BRAF-mutant vs ~60โ€“65 for wild-type. BRAF V600K patients tend to be older (>60 years)
  • Onset pattern: Insidious; typically progresses from a pre-existing nevus or arises de novo over months to years
  • Precursor lesions: Dysplastic nevi; BRAF V600E is found in ~80% of benign nevi (necessary but not sufficient for melanoma development)

Progression

AJCC Staging System (8th Edition):

Stage Description 5-Year Survival
0 (in situ) Confined to epidermis ~99%
I Thin melanoma (โ‰ค2 mm), no ulceration ~92โ€“97%
II Thicker primary or ulcerated ~53โ€“81%
III Regional lymph node or in-transit metastasis ~40โ€“78% (improved to ~75% with adjuvant therapy)
IV Distant metastasis ~15โ€“20% historically; ~50% with modern therapies
  • Progression rate: Variable; can be rapid (weeksโ€“months for nodular melanoma) or indolent (years for superficial spreading)
  • Disease course: Progressive without treatment; potential for long-term remission with modern therapy
  • Duration: Chronic; lifelong surveillance required even after complete response

Patterns

  • Remission patterns: Treatment-induced remissions with BRAF/MEK inhibitors (median duration ~9โ€“12 months); more durable remissions with immunotherapy (years)
  • Critical periods:
  • Early intervention after diagnosis significantly impacts survival
  • Window of opportunity for adjuvant therapy in resected stage III disease
  • First 3 years post-treatment: highest risk of recurrence with targeted therapy
  • Brain metastasis development: critical period requiring prompt intervention

9. Inheritance and Population

Epidemiology

Global melanoma burden (all subtypes): "A worldwide total of 325,000 new melanoma cases (174,000 males, 151,000 females) and 57,000 deaths (32,000 males, 25,000 females) was estimated for 2020" (PMID: 35353115). "Cutaneous melanoma causes 55,500 deaths annually" and accounts for 90% of skin cancer mortality (PMID: 30238891).

BRAF V600 mutant melanoma specifically: - Represents ~40โ€“50% of cutaneous melanomas - Estimated ~130,000โ€“162,500 new BRAF V600 mutant melanoma cases worldwide annually - Highest absolute numbers in populations with high melanoma incidence (Australia/New Zealand, Europe, North America)

Incidence by region (all melanoma): - Australia/New Zealand: Males 42/100,000; Females 31/100,000 (highest worldwide) - Western Europe: ~19/100,000 - North America: Males 18, Females 14/100,000 - Africa and Asia: <1/100,000

Genetic Etiology Considerations

  • Not a Mendelian inherited disease: BRAF V600 mutations are somatic
  • Inheritance pattern: Multifactorial/polygenic predisposition to melanoma; the specific BRAF mutation is acquired somatically
  • Familial melanoma syndromes: CDKN2A, CDK4, BAP1, POT1 germline mutations increase melanoma susceptibility but do not guarantee BRAF mutation status
  • Penetrance: Not applicable to the somatic BRAF mutation itself; familial melanoma gene penetrance varies (CDKN2A: 58โ€“92% by age 80)

Population Demographics

  • Sex ratio: Male predominance (OR = 2.4 for BRAF mutation); male:female ~1.15:1 for melanoma overall
  • Ethnic/racial distribution: Predominantly affects fair-skinned populations of European descent; rare in African, Asian, and Hispanic populations
  • Age distribution: BRAF-mutant melanomas are younger at diagnosis than BRAF wild-type; V600K specifically more common in older males (>60 years)
  • Geographic distribution: Higher prevalence in regions with high UV exposure and fair-skinned populations (Australia, Northern Europe, North America)
  • BRAF mutation rate varies by melanoma subtype: ~50% cutaneous, ~10โ€“15% acral/mucosal (PMID: 37016119)

10. Diagnostics

Clinical Tests

Laboratory Tests

  • Serum lactate dehydrogenase (LDH): Prognostic biomarker; elevated LDH indicates high tumor burden and is associated with shorter PFS and OS
  • Complete blood count: Baseline and monitoring; neutrophil/lymphocyte ratio has prognostic value
  • Liver function tests: Monitoring for hepatic metastases and drug hepatotoxicity
  • Renal function: Monitoring required due to nephrotoxicity of BRAF inhibitors, especially vemurafenib (PMID: 26182194)
  • Serum S100B: Tumor marker for melanoma staging and monitoring

Biomarkers

  • BRAF V600 mutation status: Essential companion diagnostic; determines eligibility for targeted therapy
  • Circulating tumor DNA (ctDNA): BRAF V600 ctDNA by ddPCR โ€” prognostic and predictive biomarker; detectable in 93% of pretreatment metastatic samples (PMID: 33587894); ctDNA clearance at early timepoints predicts improved survival (PMID: 40250457)
  • PD-L1 expression: Relevant for immunotherapy decisions
  • Tumor mutational burden (TMB): Higher TMB associated with better response to combination targeted therapy (PMID: 41537702)
  • IFNฮณ gene signature: Immune microenvironment biomarker

Imaging

  • Dermoscopy: Initial evaluation of suspicious lesions
  • CT (chest/abdomen/pelvis): Staging for distant metastases
  • PET/CT: Whole-body staging, recommended from stage IIB/C
  • MRI brain: Mandatory for staging; brain metastases present in ~32% of advanced cases
  • Ultrasound: Regional lymph node assessment; recommended from stage IB

Biopsy/Pathology

  • Excisional biopsy: Gold standard for primary diagnosis; provides Breslow depth, mitotic rate, ulceration status
  • Histopathology: Superficial spreading and nodular subtypes most common in BRAF-mutant melanoma
  • Immunohistochemistry: Anti-BRAF V600E VE1 clone antibody โ€” sensitivity 86.1%, specificity 96.9%, concordance with PCR 95.1% (PMID: 28424234)
  • Sentinel lymph node biopsy: Staging procedure for melanomas โ‰ฅ0.8 mm with risk factors or โ‰ฅ1.0 mm (PMID: 35623961)

Genetic Testing

Recommended Testing Approach

BRAF mutation testing is recommended for all patients with stage IIB/C or higher melanoma, and is mandatory before initiating BRAF/MEK inhibitor therapy (PMID: 39700658).

Testing Methods

Method Turnaround Sensitivity Clinical Use
cobasยฎ 4800 BRAF V600 Mutation Test (companion diagnostic) 1โ€“2 days High FDA-approved CDx for vemurafenib
Idylla BRAF Mutation Test 90 minutes 98.57% concordance with sequencing Rapid automated PCR-based testing (PMID: 26921540)
Pyrosequencing 1โ€“3 days High; can distinguish V600E/K/R/D Reference method; lookup tables assist complex result interpretation (PMID: 24713734)
Next-generation sequencing (NGS) 1โ€“3 weeks Very high Comprehensive profiling; detects co-mutations
Sanger sequencing 3โ€“5 days Moderate (~20% mutant allele threshold) Less commonly used now
VE1 immunohistochemistry 1โ€“2 days 86.1% sensitivity for V600E Cost-effective screening tool
Droplet digital PCR (ddPCR) 1โ€“2 days Very high (ctDNA detection) Liquid biopsy monitoring

Quality assurance: French national EQA achieved false response rate of only 4.8% across 46 laboratories, with improvement from 22 to 12 days turnaround over 6 months (PMID: 24119386).

Clinical Criteria

  • AJCC 8th Edition staging: Standard staging system
  • Breslow depth: Most important histological prognostic factor
  • Ulceration status: Independent prognostic factor
  • Mitotic rate: Prognostic significance
  • BRAF V600 mutation status: Determines targeted therapy eligibility

Differential Diagnosis

  • BRAF wild-type melanoma (NRAS, NF1, or triple wild-type subtypes)
  • Atypical/dysplastic nevus
  • Spitz nevus (may harbor BRAF fusions but not typically V600E)
  • Blue nevus
  • Melanoma in situ
  • Pigmented basal cell carcinoma

11. Outcome/Prognosis

Survival and Mortality

Metastatic BRAF V600 mutant melanoma (with modern therapy):

Treatment Median PFS Median OS 3-Year OS 5-Year OS
Dabrafenib + Trametinib (COMBI-d) ~11 months ~25 months 44% ~34%
Dabrafenib monotherapy (COMBI-d control) ~8 months ~18 months 32% ~27%
Encorafenib + Binimetinib (COLUMBUS) ~15 months ~34 months โ€” โ€”
Real-world BRAFi+MEKi (ADMIRE) 9.2 months 22.6 months โ€” โ€”

Source: "3-year PFS was 22% with dabrafenib plus trametinib versus 12% with monotherapy, and 3-year OS was 44% versus 32%, respectively" (PMID: 28475671).

Real-world data: ORR 57.4% for combined BRAFi+MEKi vs 39.8% BRAFi monotherapy; median PFS 9.2 months; median OS 22.6 months for first-line combination (PMID: 34064013).

BRAF mutation level as prognostic factor: High BRAF V600 mutation level (>0.44) associated with worse PFS and OS on multivariate analysis (P = 0.02 for both) (PMID: 39508497).

Prognostic Factors

Favorable: - Normal LDH - ECOG PS 0 - <3 metastatic sites - No brain metastases - Immune-related adverse events during treatment (mPFS 42.8 vs 6.1 months; HR 0.22, P = 0.002) (PMID: 30096703) - ctDNA clearance on treatment - High tumor immune infiltration and TMB

Unfavorable: - Elevated LDH - ECOG PS โ‰ฅ1 - โ‰ฅ3 metastatic sites - Brain metastases (introduced as major prognostic factor in real-world setting) (PMID: 34243078) - High BRAF V600 mutation level - Detectable ctDNA at baseline and on treatment

Prognostic Biomarkers

  • ctDNA: Strongest blood-based prognostic biomarker; "Baseline ctDNA was more strongly associated with survival outcomes than IFNG gene expression or tumour mutational burden" (PMID: 40250457)
  • LDH: Standard serum biomarker
  • S100B: Serum protein biomarker
  • CD8+ TILs: Higher density associated with better outcomes
  • B cell signatures: Potential predictive biomarker for targeted therapy (PMID: 34108180)

12. Treatment

Pharmacotherapy

FDA-Approved Targeted Therapy Combinations

Combination Drug Class Mechanism Approval Year
Dabrafenib + Trametinib BRAFi + MEKi BRAF V600E/K kinase inhibition + MEK1/2 inhibition 2014
Vemurafenib + Cobimetinib BRAFi + MEKi BRAF V600E kinase inhibition + MEK1/2 inhibition 2015
Encorafenib + Binimetinib BRAFi + MEKi BRAF V600E/K kinase inhibition + MEK1/2 inhibition 2018

MAXO terms: MAXO:0001084 (targeted molecular therapy); MAXO:0000058 (pharmacotherapy)

CHEBI terms: Vemurafenib (CHEBI:63637), Dabrafenib (CHEBI:75045), Trametinib (CHEBI:75998), Encorafenib (CHEBI:145372), Binimetinib (CHEBI:145371), Cobimetinib (CHEBI:145373)

Acceptability and Safety

In a network meta-analysis: "the combination of dabrafenib and trametinib is the preferred combination therapy" for BRAF V600-mutant melanoma, with better acceptability than vemurafenib + cobimetinib (RR for any-grade AEs: 0.94; CrI: 0.89โ€“0.98) (PMID: 35530323).

Common adverse events (vemurafenib): arthralgia (37%), alopecia (25%), hyperkeratosis (23%); most common grade 3/4: cutaneous SCC (8%) and keratoacanthoma (8%) (PMID: 28501764).

Nephrotoxicity: Vemurafenib more nephrotoxic than dabrafenib; 132 cases of AKI reported with vemurafenib vs 13 with dabrafenib; predominantly tubular interstitial injury (PMID: 26182194).

Phototoxicity: Vemurafenib causes clinical photosensitivity (PMID: 24154489).

Immunotherapy

Agent Drug Class Mechanism Use in BRAF+
Nivolumab Anti-PD-1 PD-1 checkpoint blockade First or second-line
Pembrolizumab Anti-PD-1 PD-1 checkpoint blockade First or second-line
Ipilimumab Anti-CTLA-4 CTLA-4 checkpoint blockade Combination with anti-PD-1
Nivolumab + Ipilimumab Anti-PD-1 + Anti-CTLA-4 Dual checkpoint blockade First-line for aggressive disease
Atezolizumab + Vemurafenib + Cobimetinib Anti-PD-L1 + BRAFi + MEKi Triplet combination First-line (IMspire150)

MAXO terms: MAXO:0001085 (immune checkpoint inhibitor therapy)

Treatment Sequencing

European guidelines recommend: "For first-line treatment particularly in BRAF wild-type patients, immunotherapy with PD-1 antibodies alone or in combination with CTLA-4 antibodies shall be considered. In stage IV melanoma with a BRAF-V600 E/K mutation, first-line therapy with BRAF/MEK inhibitors can be offered as an alternative to immunotherapy" (PMID: 35623961).

Adjuvant Therapy

For resected stage III disease: - Dabrafenib + Trametinib: Approved adjuvant; 3-year RFS ~60% in COMBI-AD - Anti-PD-1 (nivolumab, pembrolizumab): Alternative adjuvant option regardless of BRAF status - Real-world data from China: D+T significantly superior to observation (P = 0.002) and potentially superior to anti-PD-1 monotherapy (P = 0.032) for RFS in BRAF-mutant stage III melanoma (PMID: 37016119)

Brain Metastases

Encorafenib + binimetinib achieves brain metastasis response rate >60% (PMID: 40503961). Real-world data shows median PFS of 5.5 months and OS of 11.9 months for BRAF V600-mutant melanoma with brain metastases (PMID: 40411977). Stereotactic radiosurgery combined with immunotherapy achieves the highest OS rates in brain metastases; BRAF mutation appears to be a favorable prognostic factor (PMID: 30739835).

Surgical Interventions

  • Wide local excision: Primary treatment; 1โ€“2 cm margins based on Breslow depth
  • Sentinel lymph node biopsy: Staging procedure for โ‰ฅ0.8 mm with risk factors
  • Complete lymph node dissection: For sentinel node-positive disease (increasingly replaced by adjuvant systemic therapy)
  • Metastasectomy: For oligometastatic disease amenable to complete resection

MAXO terms: MAXO:0000004 (surgical procedure); MAXO:0000011 (excision)

Experimental Therapies and Novel Approaches

  • PHI-501: Dual RAF/DDR1/2 inhibitor overcomes MAPK resistance (PMID: 41935307)
  • Avutometinib (RAF-MEK clamp) + FAK inhibitors: Overcomes resistance to BRAFi+MEKi and immunotherapy (PMID: 40020669)
  • Metabolic targeting: NSAIDs (diclofenac, lumiracoxib) + BRAF inhibitors delay resistance (PMID: 30481565)
  • DCA (dichloroacetate) + elesclomol: Targeting metabolic reprogramming, effective even in vemurafenib-resistant cells (PMID: 22865452)
  • Gene-edited stem cell therapy: Allogeneic twin stem cell system for brain metastatic melanoma (PMID: 37256936)

Chemotherapy

Weekly carboplatin + paclitaxel remains a palliative option after immunotherapy failure: median PFS 3.25 months, OS 7.69 months (PMID: 39354418).


13. Prevention

Primary Prevention

  • UV radiation avoidance: Limiting sun exposure, especially during peak hours (10 AM โ€“ 4 PM)
  • Sunscreen use: Broad-spectrum SPF 30+ recommended
  • Protective clothing: Hats, long sleeves, UV-protective fabrics
  • Avoidance of indoor tanning: Especially before age 25 (62.2% BRAF V600E prevalence in early initiators vs 31.1%, P = .003) (PMID: 30923800)
  • Education: USPSTF recommends counseling on UV exposure minimization, especially for patients aged 6 months to 24 years (PMID: 39418569)
  • Public health campaigns: Beach-based campaigns can identify high-risk individuals; one campaign found 8.1% suspicious skin cancer lesions and 2.9% possible melanomas among 407 beachgoers (PMID: 25069660)

MAXO terms: MAXO:0000118 (sun protection counseling); MAXO:0000002 (preventive care)

Secondary Prevention (Screening and Early Detection)

  • Skin self-examination: ABCDE criteria (Asymmetry, Border, Color, Diameter, Evolution) and "ugly duckling" sign
  • Dermoscopy: Non-invasive tool enhancing clinical diagnosis; superior to naked-eye examination (PMID: 20806172)
  • Total body photography and digital dermoscopy: For high-risk patients to detect early changes
  • Confocal reflectance microscopy: Improves clinical diagnosis in special cases (PMID: 39700658)
  • Risk stratification: Identifying individuals with multiple nevi, family history, fair skin for targeted screening

Tertiary Prevention

  • Adjuvant therapy: Dabrafenib + trametinib or anti-PD-1 for resected stage III disease to prevent recurrence
  • Surveillance protocols: Stage-based follow-up with imaging and clinical examination
  • ctDNA monitoring: Emerging tool for minimal residual disease detection; patients with favorable ctDNA kinetics (durable undetectable) have markedly better outcomes (PMID: 40250457)

Genetic Counseling

  • For familial melanoma kindreds (CDKN2A, CDK4, BAP1 mutations)
  • BRAF V600E itself is somatic and does not require genetic counseling for family members
  • Identification of mole-prone phenotype in adolescents may facilitate early intervention (PMID: 28593303)

14. Other Species / Natural Disease

Taxonomy

BRAF mutations and melanoma occur across species:

Species NCBI Taxon ID BRAF Gene Melanoma Occurrence
Homo sapiens 9606 BRAF (Gene ID: 673) Primary disease
Mus musculus 10090 Braf (Gene ID: 109880) Engineered models
Danio rerio (zebrafish) 7955 braf (Gene ID: 403065) Engineered models
Canis lupus familiaris (dog) 9615 BRAF (Gene ID: 475526) Naturally occurring oral melanoma
Equus caballus (horse) 9796 BRAF Naturally occurring melanoma (grey horses)

Natural Disease in Animals

  • Dogs: Oral and cutaneous melanoma occurs naturally; BRAF mutations are rare but reported. Canine melanoma serves as a comparative oncology model
  • Horses: Grey horses develop melanoma with high frequency (>80% of grey horses >15 years); pathogenesis involves STX17 duplication rather than BRAF mutations
  • Fish: Xiphophorus (swordtail-platyfish) hybrids develop melanoma driven by xmrk oncogene, not BRAF

Comparative Biology

  • The RAS-RAF-MEK-ERK pathway is highly conserved across vertebrates
  • BRAF V600E can drive melanocyte transformation in zebrafish, demonstrating evolutionary conservation of the oncogenic mechanism
  • Zebrafish BRAF V600E melanomas "show an overall low mutation burden, which has a strong, inverse association with the number of initiating germline drivers" (PMID: 24148783)

15. Model Organisms

Mouse Models

  • BRAF(V600E)/Pten(โˆ’/โˆ’) syngeneic tumor graft model: Immunocompetent mouse model used to study BRAF inhibition and immunotherapy combination. "BRAF inhibition leads to a significant increase in the intratumoral CD8(+) T-cell density and cytokine production, similar to the effects of BRAF inhibition in patients" (PMID: 24903021)
  • ESC-GEMM platform: Rapid melanoma modeling system incorporating 12 clinically relevant genotypes from combinations of LSL-Braf(V600E) and other driver alleles (PMID: 31744817)
  • BrafCA/+; Tyr-CreERT2; Ptenfl/fl: Conditional BRAF V600E activation with PTEN deletion in melanocytes; develops melanoma with ~100% penetrance
  • Global pannexin 1 deletion model: Combined with BRAF/Pten melanoma; increased tumor-infiltrating lymphocytes (PMID: 38327091)
  • Syngeneic models: Enable immunotherapy studies; BP (BRAF V600E/PTENโˆ’/โˆ’) model widely used

Zebrafish Models

  • Tg(mitfa:BRAF(V600E)); p53(โˆ’/โˆ’): Develops melanoma from nevi over months; relatively low mutation burden
  • Allows visualization of melanoma development in vivo
  • "Melanomas present with variable onset and pathology, implicating additional somatic mutations in a multi-hit tumorigenic process" (PMID: 24148783)
  • Recurrent amplification of protein kinase A pathway in cooperation with BRAF(V600E) and p53โˆ’/โˆ’

Cell Line Models

  • A375: Human melanoma cell line, BRAF V600E mutant; most widely used in vitro model
  • SK-MEL-28: Human melanoma cell line, BRAF V600E
  • SK-MEL-3: Used for xenograft studies of drug resistance (PMID: 41935307)
  • WM266-4, Colo829: Additional BRAF V600E lines
  • Drug-resistant derivatives generated for resistance mechanism studies

Model Limitations

  • Mouse models may not fully recapitulate human tumor microenvironment complexity
  • Syngeneic models use murine tumors that may differ in antigen presentation
  • Zebrafish lack certain mammalian immune cell populations
  • Cell lines may diverge from primary tumor biology after prolonged culture
  • Patient-derived xenografts (PDX) better represent heterogeneity but require immunodeficient hosts

CNS Tumor Models

  • Challenges in modeling heterogeneous BRAF-mutant CNS neoplasms; pediatric cancer model development lags behind adult (PMID: 37920169)

Key Findings (Evidence Summary)

Finding 1: BRAF V600E Is the Dominant Oncogenic Mutation in ~40โ€“50% of Cutaneous Melanomas

BRAF V600E is the most frequent oncogenic BRAF mutation in melanoma, present in 40โ€“50% of all cutaneous melanomas. Among BRAF V600 mutations specifically, V600E accounts for ~79%, V600K for ~12%, V600R for ~5%, and V600M for ~4%. The V600E substitution results in a constitutively active kinase domain with ~500-fold increased activity, leading to MAPK/ERK pathway hyperactivation independent of extracellular stimuli, driving cell proliferation, survival, angiogenesis, and other hallmark cancer features.

Key citations: - "As widely acknowledged, 40-50% of all melanoma patients harbour an activating BRAF mutation (mostly BRAF V600E)" โ€” PMID: 33801689 - "V600E mutation results in a constitutively active kinase domain, leading to dysregulated downstream signaling independent of extracellular stimuli" โ€” PMID: 39961465 - "Among BRAF V600 mutations, 79%, 12%, 5%, and 4% were V600E, V600K, V600R, and V600M, respectively" โ€” PMID: 22536370

Finding 2: BRAF V600 Melanoma Is Associated with Younger Age, Intermittent Sun Exposure, and Trunk Location

BRAF mutations are significantly associated with distinct clinicopathological features: male gender (OR = 2.4), younger age (OR = 2.7), superficial spreading melanoma (OR = 15.6), nodular melanoma (OR = 9.5), trunk localization (OR = 6.3), and intermittent sun exposure (OR = 4.6). Indoor tanning users, especially those initiating before age 25, had dramatically higher BRAF V600E prevalence (62.2% vs 31.1%, P = .003).

Key citations: - "Associations with BRAF mutation were as follows: male gender [OR = 2.4], younger age (OR = 2.7), superficial spreading (OR = 15.6) and nodular melanoma (OR = 9.5), trunk localization (OR = 6.3), and intermittent sun exposure (OR = 4.6)" โ€” PMID: 25357015 - "BRAF V600E genotype was more prevalent in ever-users than in nonusers (42.9% vs 28.3%, P = .04)" โ€” PMID: 30923800

Finding 3: BRAF+MEK Inhibitor Combination Achieves ~60% ORR but Resistance Develops Within 6โ€“12 Months

The combination of BRAF and MEK inhibitors achieves high initial response rates (~57โ€“70% ORR) but acquired resistance typically develops within 6โ€“12 months. Long-term data from COMBI-d showed 3-year PFS of 22% and 3-year OS of 44% with dabrafenib + trametinib. Resistance mechanisms involve MAPK reactivation through secondary NRAS Q61 mutations, MEK1 mutations (Q56P, E203K), BRAF amplification, and alternative pathway activation.

Key citations: - "3-year PFS was 22% with dabrafenib plus trametinib versus 12% with monotherapy, and 3-year OS was 44% versus 32%, respectively" โ€” PMID: 28475671 - "Acquired resistance to vemurafenib associated with reactivation of MAPK signaling...and the appearance of secondary NRAS(Q61) mutations or MEK1(Q56P) or MEK1(E203K) mutations" โ€” PMID: 23569304

Finding 4: BRAF V600E Drives Metabolic Reprogramming; Inhibition Reverses the Shift

BRAF V600E mutations augment glycolysis (Warburg effect) to support macromolecular synthesis and proliferation, while suppressing MITF and PGC1ฮฑ expression to reduce mitochondrial biogenesis. BRAF inhibition reverses this metabolic program, shifting cells toward oxidative phosphorylation โ€” a metabolic plasticity that contributes to drug resistance.

Key citations: - "BRAF mutations augment glycolysis to promote macromolecular synthesis and proliferation" โ€” PMID: 38972133 - "BRAF(V600E) acts to suppress expression of MITF and PGC1ฮฑ. Therapeutic inhibition of BRAF(V600E) reverses metabolic reprogramming and elevates OXPHOS through increased MITF-PGC1ฮฑ levels" โ€” PMID: 24610826

Finding 5: Global Melanoma Epidemiology

GLOBOCAN 2020 reported 325,000 new melanoma cases and 57,000 deaths worldwide, with highest incidence in Australia/New Zealand (males 42/100,000; females 31/100,000). BRAF V600 mutations represent 40โ€“50% of these cutaneous melanomas.

Key citations: - "A worldwide total of 325,000 new melanoma cases (174,000 males, 151,000 females) and 57,000 deaths (32,000 males, 25,000 females) was estimated for 2020" โ€” PMID: 35353115 - "Cutaneous melanoma causes 55,500 deaths annually" โ€” PMID: 30238891


Mechanistic Model

The following causal chain describes the pathogenesis of BRAF V600 Mutant Melanoma:

UV Radiation (intermittent) + Genetic Susceptibility (MC1R, CDKN2A, fair skin)
    โ”‚
    โ–ผ
    Somatic BRAF V600E Mutation in Melanocyte
    โ”‚
    โ–ผ
    Constitutive BRAF Kinase Activation (~500x)
    โ”‚
    โ”œโ”€โ”€โ–บ MEK1/2 Phosphorylation โ”€โ”€โ–บ ERK1/2 Activation
    โ”‚         โ”‚
    โ”‚         โ”œโ”€โ”€โ–บ Cell Proliferation (Cyclin D1, c-Myc)
    โ”‚         โ”œโ”€โ”€โ–บ Survival (BIM suppression, MCL-1 upregulation)
    โ”‚         โ”œโ”€โ”€โ–บ Angiogenesis (VEGF)
    โ”‚         โ””โ”€โ”€โ–บ Immune Evasion (PD-L1, IL-10)
    โ”‚
    โ”œโ”€โ”€โ–บ MITF/PGC1ฮฑ Suppression โ”€โ”€โ–บ Metabolic Shift to Glycolysis
    โ”‚
    โ””โ”€โ”€โ–บ Cooperating Events (PTEN loss, CDKN2A deletion, TERT activation)
        โ”‚
        โ–ผ
 Melanoma Development & Progression
        โ”‚
    โ”Œโ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”ดโ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”
    โ–ผ                       โ–ผ
    Local Invasion              Metastasis
    (Breslow depth)        (LN โ†’ Distant organs)
                    โ”‚
                    โ–ผ
            BRAF/MEK Inhibitor Therapy
                    โ”‚
        โ”Œโ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”ดโ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”
        โ–ผ                       โ–ผ
Initial Response           Acquired Resistance
(ORR ~60-70%)         (6-12 months median)
                            โ”‚
        โ”Œโ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”ผโ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”€โ”
        โ–ผ                   โ–ผ                   โ–ผ
MAPK Reactivation    PI3K/AKT/FAK         Metabolic Shift
(NRAS, MEK mut,      Activation            (Glycolysis โ†’ OXPHOS)
 BRAF amplification)

Evidence Base

Reference PMID Key Contribution
Paluncic et al., 2021 33801689 BRAF V600E prevalence in 40-50% of melanomas
Colombino et al., 2014 25357015 Clinicopathological associations with BRAF mutation
Ascierto et al., 2012 22536370 V600 mutation subtype distribution
Long et al., 2017 28475671 COMBI-d long-term survival data
Shi et al., 2014 23569304 Vemurafenib resistance mechanisms
Haq et al., 2014 24610826 BRAF-driven metabolic reprogramming
Garbe et al., 2022 35623961 European treatment guidelines
Arnold et al., 2022 35353115 GLOBOCAN 2020 melanoma burden
Schadendorf et al., 2018 30238891 Comprehensive melanoma review
Bhatt et al., 2020 30923800 Indoor tanning and BRAF mutation
Haq, 2024 38972133 Metabolic changes in BRAF-mutant melanoma
Kumar et al., 2025 39961465 BRAF V600E structural and pathway analysis
Saiag et al., 2021 34243078 Real-world French study of D+T
Nassi et al., 2021 34064013 ADMIRE real-world registry
Lee et al., 2026 40250457 ctDNA as prognostic biomarker

Limitations and Knowledge Gaps

  1. Optimal treatment sequencing: The ideal order of targeted therapy vs. immunotherapy for BRAF V600-mutant melanoma remains unclear; no head-to-head randomized trial comparing first-line BRAF/MEKi vs. anti-PD-1 vs. combination immunotherapy has been completed.

  2. Resistance prediction: While mechanisms of acquired resistance are increasingly understood, reliable predictive biomarkers to identify patients who will develop resistance early vs. achieve durable responses are lacking.

  3. Rare BRAF variants: Treatment evidence for V600R, V600M, V600D, and non-V600 BRAF mutations is limited to retrospective analyses. ORR for rare V600 non-E/K mutations is 45% vs 26% for non-V600 mutations (P = 0.025) (PMID: 40850313).

  4. Ethnic diversity: Most clinical trial data come from predominantly Caucasian populations. BRAF mutation rates and responses may differ in Asian, African, and other populations. A Chinese study found mutation rates of ~50% in cutaneous but only 10โ€“15% in acral/mucosal subtypes (PMID: 37016119).

  5. Long-term survivorship: As patients increasingly achieve long-term responses, the chronic effects of prolonged targeted therapy and immunotherapy on quality of life, organ function, and secondary malignancy risk require further study.

  6. Brain metastases: While intracranial activity has been demonstrated, brain metastases remain a major prognostic challenge and the optimal management (systemic therapy, SRS, WBRT, or combinations) requires further prospective data.

  7. Minimal residual disease: ctDNA-guided interventional strategies (escalating therapy in ctDNA-positive patients, de-escalating in ctDNA-negative) are promising but unvalidated in prospective trials.

  8. Gene-environment interactions: The precise molecular mechanism by which intermittent UV exposure preferentially induces BRAF V600E mutations (vs. other mutation patterns) is not fully elucidated.


Proposed Follow-up Experiments/Actions

  1. Prospective biomarker-guided clinical trials: Design trials using baseline ctDNA and immune gene signatures to stratify patients to optimal first-line therapy (targeted vs. immunotherapy vs. combination).

  2. ctDNA-guided adjuvant therapy: Test whether ctDNA-driven escalation/de-escalation strategies improve outcomes in resected stage III BRAF-mutant melanoma.

  3. Novel combination strategies: Evaluate PHI-501 (pan-RAF/DDR inhibitor) and avutometinib + FAK inhibitor combinations in BRAF/MEK inhibitor-resistant patients.

  4. Metabolic vulnerability exploitation: Clinical trials combining BRAF/MEK inhibitors with metabolic inhibitors (e.g., OXPHOS inhibitors, glutaminase inhibitors) to prevent metabolic adaptation-based resistance.

  5. Rare BRAF variant registry: Continue global data collection through resources like the Heidelberg rare BRAF mutations database to establish evidence-based treatment guidelines for V600R, V600M, V600D, and non-V600 mutations.

  6. Single-cell and spatial transcriptomics: Apply advanced technologies to resistant tumors to understand the spatial organization of resistant clones and immune microenvironment changes.

  7. Diverse population studies: Conduct BRAF mutation screening and treatment outcome studies in underrepresented populations (African, Asian, Latin American) to ensure equitable access to precision medicine.

  8. Brain metastasis prevention: Investigate whether early use of brain-penetrant BRAF/MEK inhibitors (e.g., encorafenib) can prevent or delay brain metastasis development in high-risk patients.


Report generated: 2026-05-05 Based on analysis of 109 published papers and 5 confirmed findings Disease: BRAF V600 Mutant Melanoma (MONDO:0005012 subtype)